BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00005484
         (685 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB41120.1| putative protein [Arabidopsis thaliana] gi|72693...    57   7e-06
ref|XP_002869702.1| hypothetical protein ARALYDRAFT_329184 [Arab...    56   9e-06

>emb|CAB41120.1| putative protein [Arabidopsis thaliana] gi|7269331|emb|CAB79390.1|
            putative protein [Arabidopsis thaliana]
          Length = 942

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 62/256 (24%), Positives = 102/256 (39%), Gaps = 28/256 (10%)
 Frame = +2

Query: 2    KMARTTRVSLTVRNAITIDIIPMDLLCLLRVMSRSSLMVIVLLVFPLLYMAKNSPIENEL 181
            K   T + SL       I  +P  L   L +    S ++I L  FP  ++ +     + +
Sbjct: 683  KNETTRKGSLEANMKFVIPKLPFTLSLFLSL----SFLIIFLFAFPTTFLRRPLSSSSSV 738

Query: 182  HNIAYDDSENNAYDG--SEDLYVVHNNAYAGDANPRVGHVNSRQWWDYNVNDLPRLFHII 355
             ++A D+     + G  S + Y+ H        NP++  V + + WD  V      F  +
Sbjct: 739  TSVA-DEGIRIRHHGYSSYEAYIKHQ--LNKTQNPKLRKVWTTRDWDRKVRVFSTFFRRL 795

Query: 356  NEEGMLEVGAKALYNGALNGHDIISEAFFTSQEDATSTF---------------PFPDMW 490
            ++ G+L   +KAL  GA  G ++ +      ++                     PF +  
Sbjct: 796  SDRGLLSNQSKALSIGARVGQEVAALRLIGVEDSVGIDLVPRPPLVVKGDFHAQPFDEET 855

Query: 491  FDFVLWVMLDPMDGGSFPVGEIERTLKTDGVLVTHL-----------NQYTTLSPIVLSL 637
            FDF    + D        VGEIERTLK  GV V H+           N   ++ P+V  L
Sbjct: 856  FDFEFSNVFDHALYPEKFVGEIERTLKPGGVCVLHVSISGKTDKYSANDLLSVKPLV-KL 914

Query: 638  MPSFKIIFARKLEGPG 685
                K++  RK++G G
Sbjct: 915  FKRSKVVEMRKIDGFG 930


>ref|XP_002869702.1| hypothetical protein ARALYDRAFT_329184 [Arabidopsis lyrata subsp.
            lyrata] gi|297315538|gb|EFH45961.1| hypothetical protein
            ARALYDRAFT_329184 [Arabidopsis lyrata subsp. lyrata]
          Length = 942

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 28/236 (11%)
 Frame = +2

Query: 62   IPMDLLCLLRVMSRSSLMVIVLLVFPLLYMAKNSPIENELHNIAYDDSENNAYDG--SED 235
            +P  L  LL +    SL++I L  FP  ++ +  P+ + +  +A D+     + G  S +
Sbjct: 705  LPFTLSLLLSL----SLLIIFLFAFPTTFLRR--PLSSSVIAVA-DEGIRIRHHGYSSYE 757

Query: 236  LYVVHNNAYAGDANPRVGHVNSRQWWDYNVNDLPRLFHIINEEGMLEVGAKALYNGALNG 415
             Y+ H        NP++  V + + WD  V      F  +++ G+L   +KAL  GA  G
Sbjct: 758  AYIKHQ--LNKTQNPKLRKVWTTRDWDRKVRVFSTFFRRLSDRGLLSNQSKALSIGARVG 815

Query: 416  HDIISEAFFTSQEDATSTF---------------PFPDMWFDFVLWVMLDPMDGGSFPVG 550
             ++ +      ++                     PF +  FDF    + D        VG
Sbjct: 816  QEVAALRLIGVEDSVGIDLVPRPPLVVKGDFHAQPFDEETFDFEFSNVFDHALYPEKFVG 875

Query: 551  EIERTLKTDGVLVTHL-----------NQYTTLSPIVLSLMPSFKIIFARKLEGPG 685
            EIERTLK  GV V H+           N   ++ P+V +L    K++  RK++G G
Sbjct: 876  EIERTLKPGGVCVLHVSISGKTDKYSANDLFSVKPLV-NLFKRSKVVEMRKIDGFG 930