BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00005346
         (768 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]                      120   5e-25
ref|XP_001780298.1| predicted protein [Physcomitrella patens] gi...   120   5e-25
ref|XP_006428361.1| hypothetical protein CICLE_v10013800mg [Citr...   115   2e-23
ref|XP_006493918.1| PREDICTED: putative pentatricopeptide repeat...   115   2e-23
gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygr...   114   4e-23
ref|XP_006663835.1| PREDICTED: pentatricopeptide repeat-containi...   113   8e-23
gb|EMJ05752.1| hypothetical protein PRUPE_ppa016618mg, partial [...   113   8e-23
ref|XP_002883423.1| pentatricopeptide repeat-containing protein ...   113   8e-23
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi...   112   1e-22
ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containi...   112   1e-22
gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonic...   112   1e-22
ref|XP_004510764.1| PREDICTED: pentatricopeptide repeat-containi...   112   1e-22
ref|XP_002319164.2| pentatricopeptide repeat-containing family p...   112   2e-22
ref|XP_002441855.1| hypothetical protein SORBIDRAFT_08g003540 [S...   111   2e-22
ref|XP_006651472.1| PREDICTED: pentatricopeptide repeat-containi...   111   3e-22
ref|XP_002322250.2| hypothetical protein POPTR_0015s10720g [Popu...   111   3e-22
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi...   110   4e-22
ref|XP_002322703.2| hypothetical protein POPTR_0016s05390g [Popu...   110   5e-22
gb|EMJ00195.1| hypothetical protein PRUPE_ppa002176mg [Prunus pe...   110   5e-22
ref|XP_001764438.1| predicted protein [Physcomitrella patens] gi...   110   5e-22

>dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  120 bits (301), Expect = 5e-25
 Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 3/211 (1%)
 Frame = +2

Query: 143 VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
           +NA  +  ++ KGR L+ +ILK G    D   G +L+ M+++      A K+F   PT+ 
Sbjct: 218 LNACADARNVDKGRELYNLILKAGW-DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD 276

Query: 323 TQPWNILLQCYARQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHA 493
              W  ++   AR G  ++A  LF  ME      D   F S L+A      L+QG++VHA
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336

Query: 494 LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
              ++G D  +YVGT+++  Y+K        E A   F  +  +NVV+W AMI+  ++H 
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTK----CGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHG 392

Query: 674 RYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           R     + FN+M+E+ I P+RVT   ++G C
Sbjct: 393 RIDEAFLFFNKMIESGIEPNRVTFMSILGAC 423



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 3/211 (1%)
 Frame = +2

Query: 143  VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
            +N  ++  SL  G+ +H +I+K  G + D    N+L+ M++       AK +F   P + 
Sbjct: 521  LNVCKSSDSLELGKWVHFLIMK-AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRD 579

Query: 323  TQPWNILLQCYARQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHA 493
               WN ++  + + G  + A + F  M+ +    D  TF   L A  S   L +G+++HA
Sbjct: 580  LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639

Query: 494  LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
            L  +   D +V VGT L+  Y+K        E A + F K+ +KNV +W +MI+  ++H 
Sbjct: 640  LITEAAFDCDVLVGTGLISMYTK----CGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHG 695

Query: 674  RYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
            R    + LF +M +  + P  +T    +  C
Sbjct: 696  RGKEALELFYQMQQEGVKPDWITFVGALSAC 726



 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 3/191 (1%)
 Frame = +2

Query: 203 LKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQGMPREA 382
           +K+ G Q D    N+L+ MY +   T  AK+IF     K    WN+LL  Y + G+  EA
Sbjct: 136 IKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEA 195

Query: 383 MELFNSMEGNQ---DVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGTSLVEF 553
            +L   M  +    D  TF S L A   A  + +G++++ L +K G D +++VGT+L+  
Sbjct: 196 FKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINM 255

Query: 554 YSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPS 733
           + K  +       A + F  +  +++V W +MI+  +RH R+     LF RM E  + P 
Sbjct: 256 HIKCGD----IGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311

Query: 734 RVTLGIVIGMC 766
           +V    ++  C
Sbjct: 312 KVAFVSLLRAC 322



 Score = 93.2 bits (230), Expect = 9e-17
 Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 5/213 (2%)
 Frame = +2

Query: 143 VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
           + A  +  +L +G+ +HA  +K+ G   +   G +++ MY +      A ++F     + 
Sbjct: 319 LRACNHPEALEQGKKVHAR-MKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377

Query: 323 TQPWNILLQCYARQGMPREAMELFNSM-----EGNQDVFTFASTLKALGSASWLKQGQQV 487
              W  ++  +A+ G   EA   FN M     E N+   TF S L A  S S LK+GQQ+
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNR--VTFMSILGACSSPSALKRGQQI 435

Query: 488 HALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSR 667
               I+ G   +  V T+L+  Y+K        + A R F KI ++NVVAWNAMI+A  +
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAK----CGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491

Query: 668 HARYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           H +Y + +  F  +L+  I P+  T   ++ +C
Sbjct: 492 HEQYDNALATFQALLKEGIKPNSSTFTSILNVC 524



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 4/180 (2%)
 Frame = +2

Query: 143  VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
            +NA  +  +L +GR LHA+I  +     D L G  L+ MY +      A ++F   P K 
Sbjct: 622  LNACASPEALTEGRRLHALIT-EAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN 680

Query: 323  TQPWNILLQCYARQGMPREAMELFNSMEG---NQDVFTFASTLKALGSASWLKQGQQVHA 493
               W  ++  YA+ G  +EA+ELF  M+      D  TF   L A   A  +++G     
Sbjct: 681  VYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQ 740

Query: 494  LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH-EKNVVAWNAMISACSRH 670
               +  ++  +     +V+ + +          A     K+  E +   W A++ AC  H
Sbjct: 741  SMKEFNIEPRMEHYGCMVDLFGRAGL----LNEAVEFIIKMQVEPDSRVWGALLGACQVH 796


>ref|XP_001780298.1| predicted protein [Physcomitrella patens]
           gi|162668246|gb|EDQ54857.1| predicted protein
           [Physcomitrella patens]
          Length = 986

 Score =  120 bits (301), Expect = 5e-25
 Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 3/211 (1%)
 Frame = +2

Query: 143 VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
           +NA  +  ++ KGR L+ +ILK G    D   G +L+ M+++      A K+F   PT+ 
Sbjct: 218 LNACADARNVDKGRELYNLILKAGW-DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD 276

Query: 323 TQPWNILLQCYARQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHA 493
              W  ++   AR G  ++A  LF  ME      D   F S L+A      L+QG++VHA
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336

Query: 494 LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
              ++G D  +YVGT+++  Y+K        E A   F  +  +NVV+W AMI+  ++H 
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTK----CGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHG 392

Query: 674 RYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           R     + FN+M+E+ I P+RVT   ++G C
Sbjct: 393 RIDEAFLFFNKMIESGIEPNRVTFMSILGAC 423



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 3/211 (1%)
 Frame = +2

Query: 143  VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
            +N  ++  SL  G+ +H +I+K  G + D    N+L+ M++       AK +F   P + 
Sbjct: 521  LNVCKSSDSLELGKWVHFLIMK-AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRD 579

Query: 323  TQPWNILLQCYARQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHA 493
               WN ++  + + G  + A + F  M+ +    D  TF   L A  S   L +G+++HA
Sbjct: 580  LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639

Query: 494  LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
            L  +   D +V VGT L+  Y+K        E A + F K+ +KNV +W +MI+  ++H 
Sbjct: 640  LITEAAFDCDVLVGTGLISMYTK----CGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHG 695

Query: 674  RYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
            R    + LF +M +  + P  +T    +  C
Sbjct: 696  RGKEALELFYQMQQEGVKPDWITFVGALSAC 726



 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 3/191 (1%)
 Frame = +2

Query: 203 LKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQGMPREA 382
           +K+ G Q D    N+L+ MY +   T  AK+IF     K    WN+LL  Y + G+  EA
Sbjct: 136 IKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEA 195

Query: 383 MELFNSMEGNQ---DVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGTSLVEF 553
            +L   M  +    D  TF S L A   A  + +G++++ L +K G D +++VGT+L+  
Sbjct: 196 FKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINM 255

Query: 554 YSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPS 733
           + K  +       A + F  +  +++V W +MI+  +RH R+     LF RM E  + P 
Sbjct: 256 HIKCGD----IGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311

Query: 734 RVTLGIVIGMC 766
           +V    ++  C
Sbjct: 312 KVAFVSLLRAC 322



 Score = 93.2 bits (230), Expect = 9e-17
 Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 5/213 (2%)
 Frame = +2

Query: 143 VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
           + A  +  +L +G+ +HA  +K+ G   +   G +++ MY +      A ++F     + 
Sbjct: 319 LRACNHPEALEQGKKVHAR-MKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377

Query: 323 TQPWNILLQCYARQGMPREAMELFNSM-----EGNQDVFTFASTLKALGSASWLKQGQQV 487
              W  ++  +A+ G   EA   FN M     E N+   TF S L A  S S LK+GQQ+
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNR--VTFMSILGACSSPSALKRGQQI 435

Query: 488 HALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSR 667
               I+ G   +  V T+L+  Y+K        + A R F KI ++NVVAWNAMI+A  +
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAK----CGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491

Query: 668 HARYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           H +Y + +  F  +L+  I P+  T   ++ +C
Sbjct: 492 HEQYDNALATFQALLKEGIKPNSSTFTSILNVC 524



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 4/180 (2%)
 Frame = +2

Query: 143  VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
            +NA  +  +L +GR LHA+I  +     D L G  L+ MY +      A ++F   P K 
Sbjct: 622  LNACASPEALTEGRRLHALIT-EAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN 680

Query: 323  TQPWNILLQCYARQGMPREAMELFNSMEG---NQDVFTFASTLKALGSASWLKQGQQVHA 493
               W  ++  YA+ G  +EA+ELF  M+      D  TF   L A   A  +++G     
Sbjct: 681  VYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQ 740

Query: 494  LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH-EKNVVAWNAMISACSRH 670
               +  ++  +     +V+ + +          A     K+  E +   W A++ AC  H
Sbjct: 741  SMKEFNIEPRMEHYGCMVDLFGRAGL----LNEAVEFIIKMQVEPDSRVWGALLGACQVH 796


>ref|XP_006428361.1| hypothetical protein CICLE_v10013800mg [Citrus clementina]
           gi|557530418|gb|ESR41601.1| hypothetical protein
           CICLE_v10013800mg [Citrus clementina]
          Length = 680

 Score =  115 bits (288), Expect = 2e-23
 Identities = 73/254 (28%), Positives = 125/254 (49%), Gaps = 20/254 (7%)
 Frame = +2

Query: 65  PHAWMAILSIPTTNNLHCNPLPL-----------DHHV--NALQNCPSLLK---GRALHA 196
           P  W +I+   T N L    L             DH+V  + L++C  L+    G ++HA
Sbjct: 71  PVTWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHA 130

Query: 197 IILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQGMPR 376
            I++ G   +D  T N+LM MY Q +     +K+F+  P      WN ++   AR G+  
Sbjct: 131 CIIRLG-VDLDLYTNNALMNMYAQSQNMDIVRKVFEMMPVSDLVSWNTVIVGLARNGLYE 189

Query: 377 EAMELFNSMEGN----QDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGTSL 544
           EA+ +   M GN     D FT +S L        + +G+++H  +I+ G+D NV +G+SL
Sbjct: 190 EALNIVRQM-GNVNLKPDSFTLSSVLPIFADYVDVIKGKEIHGYAIRHGLDANVCIGSSL 248

Query: 545 VEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRI 724
           +  Y+K        E + R FC +  K+ ++WN++I+ C ++  +  G+  F +ML  +I
Sbjct: 249 INMYAKCAR----VEDSHRLFCLLPVKDAISWNSIIAGCVQNGLFDEGLKFFRQMLIAKI 304

Query: 725 SPSRVTLGIVIGMC 766
            P  V+   ++  C
Sbjct: 305 KPRHVSFSSIMPAC 318



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 3/202 (1%)
 Frame = +2

Query: 170 LLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQ 349
           ++KG+ +H   ++ G    +   G+SL+ MY +  +   + ++F   P K    WN ++ 
Sbjct: 223 VIKGKEIHGYAIRHG-LDANVCIGSSLINMYAKCARVEDSHRLFCLLPVKDAISWNSIIA 281

Query: 350 CYARQGMPREAMELFNSM---EGNQDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDG 520
              + G+  E ++ F  M   +      +F+S + A    + L  G+Q+H   I+ G D 
Sbjct: 282 GCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRNGFDD 341

Query: 521 NVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLF 700
           N+++ +SL++ Y+K          A   F K+   ++V+W A+I   + H   H  I LF
Sbjct: 342 NMFIASSLLDMYAK----CGNIRLARCIFDKMDLHDIVSWTAVIMGNALHGNAHDAISLF 397

Query: 701 NRMLETRISPSRVTLGIVIGMC 766
            +M +  + P+ V    V+  C
Sbjct: 398 EQMEKDGVKPNSVAFVAVLTAC 419


>ref|XP_006493918.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Citrus sinensis]
          Length = 610

 Score =  115 bits (287), Expect = 2e-23
 Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 19/257 (7%)
 Frame = +2

Query: 53  TLHNPHAWMAILSIPTTNNLHCNPLPL-----------DHHV--NALQNCPSL---LKGR 184
           TL +   W +++S    N L C  L             D H+  +A ++C  L     G 
Sbjct: 99  TLKSATTWSSVISSFAQNELPCLALEYFRRMIGERRFPDDHIFPSATKSCAILGDFNAGA 158

Query: 185 ALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQ 364
           ++H +++K G    D    +SL+ MY +  Q   A+K+F   P +    W  ++  YA+ 
Sbjct: 159 SIHCLVVKIG-YDFDVFVNSSLLDMYAKCGQLKTARKVFDEMPERNVVSWTGMIYGYAQS 217

Query: 365 GMPREAMELFN-SMEGNQDV--FTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVG 535
           G   EA+ LF  ++  N DV  FTF+S L   G+ + L+ G+Q+H L +K   D + +VG
Sbjct: 218 GETGEALSLFKQALYENLDVNDFTFSSVLNVCGNTTVLELGKQIHGLCVKTSFDSSSFVG 277

Query: 536 TSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLE 715
           +SL+  YSK        E A+R F ++  +N+  WNAM+ AC++H+  +    LF  M  
Sbjct: 278 SSLISLYSK----CGVIEPAYRVFQEVRVRNLGMWNAMLIACAQHSHTNKVFDLFKEMER 333

Query: 716 TRISPSRVTLGIVIGMC 766
             + P+ +T   V+  C
Sbjct: 334 FGLKPNFITFLCVLYAC 350


>gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  114 bits (285), Expect = 4e-23
 Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 3/211 (1%)
 Frame = +2

Query: 143 VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
           +NA  +  ++ KG  L ++IL  G    D   G +L+ M+++      A K+F   P + 
Sbjct: 212 LNACADAKNVDKGGELFSLILNAGW-DTDLFVGTALINMHIKCGGVDDALKVFNNLPRRD 270

Query: 323 TQPWNILLQCYARQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHA 493
              W  ++   AR    ++A  LF  ME      D   F S LKA      L+QG++VHA
Sbjct: 271 LITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHA 330

Query: 494 LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
              ++G+D  +YVGT+L+  Y+K        E A   F  +  +NVV+W AMI+  ++H 
Sbjct: 331 RMKEVGLDTEIYVGTALLSMYTK----CGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHG 386

Query: 674 RYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           R     + FN+M+E+ I P+RVT   ++G C
Sbjct: 387 RMEEAFLFFNKMIESGIEPNRVTFMSILGAC 417



 Score = 93.6 bits (231), Expect = 7e-17
 Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 5/213 (2%)
 Frame = +2

Query: 143 VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
           + A  +  +L +G+ +HA  +K+ G   +   G +L+ MY +      A ++F     + 
Sbjct: 313 LKACNHPEALEQGKRVHAR-MKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRN 371

Query: 323 TQPWNILLQCYARQGMPREAMELFNSM-----EGNQDVFTFASTLKALGSASWLKQGQQV 487
              W  ++  +A+ G   EA   FN M     E N+   TF S L A    S LKQG+Q+
Sbjct: 372 VVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNR--VTFMSILGACSRPSALKQGRQI 429

Query: 488 HALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSR 667
           H   IK G   +  V T+L+  Y+K          A   F +I ++NVVAWNAMI+A  +
Sbjct: 430 HDRIIKAGYITDDRVRTALLSMYAK----CGSLMDARNVFERISKQNVVAWNAMITAYVQ 485

Query: 668 HARYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           H +Y + +  F  +L+  I P   T   ++ +C
Sbjct: 486 HEKYDNAVATFQALLKEGIKPDSSTFTSILNVC 518



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
 Frame = +2

Query: 203 LKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQGMPREA 382
           +K    Q D    N L+ MY +   T  AK+IF   P K    WN+LL  Y +     EA
Sbjct: 130 IKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEA 189

Query: 383 MELFNSM--EG-NQDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGTSLVEF 553
             L   M  +G   D +TF   L A   A  + +G ++ +L +  G D +++VGT+L+  
Sbjct: 190 FRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINM 249

Query: 554 YSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPS 733
           + K      G + A + F  +  ++++ W +MI+  +RH ++     LF  M E  + P 
Sbjct: 250 HIK----CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPD 305

Query: 734 RVTLGIVIGMC 766
           +V    ++  C
Sbjct: 306 KVAFVSLLKAC 316



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
 Frame = +2

Query: 143  VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
            +N  ++  +L  G+ + ++I++  G + D    N+L+ M++       A  +F   P + 
Sbjct: 515  LNVCKSPDALELGKWVQSLIIR-AGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERD 573

Query: 323  TQPWNILLQCYARQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHA 493
               WN ++  + + G  + A + F  M+ +    D  TF   L A  S   L +G+++HA
Sbjct: 574  LVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHA 633

Query: 494  LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
            L  +  +D +V VGT L+  Y+K        + A   F  + +KNV +W +MI+  ++H 
Sbjct: 634  LITEAALDCDVVVGTGLISMYTK----CGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHG 689

Query: 674  RYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
            R    + LF +M +  + P  +T    +  C
Sbjct: 690  RGKEALELFCQMQQEGVKPDWITFVGALSAC 720



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 4/180 (2%)
 Frame = +2

Query: 143  VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
            +NA  +  +L +GR LHA+I  +     D + G  L+ MY +      A  +F   P K 
Sbjct: 616  LNACASPEALTEGRRLHALIT-EAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKN 674

Query: 323  TQPWNILLQCYARQGMPREAMELFNSMEG---NQDVFTFASTLKALGSASWLKQGQQVHA 493
               W  ++  YA+ G  +EA+ELF  M+      D  TF   L A   A  +K+G   H 
Sbjct: 675  VYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLH-HF 733

Query: 494  LSIK-LGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRH 670
             S+K   ++  +     +V+ + +    +   E   +   K   +    W A++ AC  H
Sbjct: 734  ESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSR---LWGALLGACQVH 790


>ref|XP_006663835.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Oryza brachyantha]
          Length = 630

 Score =  113 bits (282), Expect = 8e-23
 Identities = 67/203 (33%), Positives = 110/203 (54%), Gaps = 3/203 (1%)
 Frame = +2

Query: 167 SLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILL 346
           ++++ + LH I +K       +  G +++ +Y +      A  IF+  P KT+  W+ L 
Sbjct: 172 AIIECKQLHTIAIKLA-LDSSSFVGTAVLDVYAKCNMIKDACSIFERMPEKTSVTWSSLF 230

Query: 347 QCYARQGMPREAMELFNSME--GNQ-DVFTFASTLKALGSASWLKQGQQVHALSIKLGVD 517
             Y + G+  EA+ LF S +  G Q   FT +S L    S + + +G QVHA+ +K G  
Sbjct: 231 AGYVQNGLHEEALCLFRSAQRGGIQLTEFTVSSILSTCASLALIIEGTQVHAVIVKSGFH 290

Query: 518 GNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVL 697
            N++V TSLV+ Y++  +     E ++  F  + +KNVV WNAMI++ SRHA     ++L
Sbjct: 291 SNLFVATSLVDVYARCGQ----IERSYEVFADMEQKNVVLWNAMIASFSRHAHSWEAMIL 346

Query: 698 FNRMLETRISPSRVTLGIVIGMC 766
           F +M +  ISP+ VT   V+  C
Sbjct: 347 FEKMQQVGISPNEVTYLSVLSAC 369



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 58/213 (27%), Positives = 108/213 (50%), Gaps = 6/213 (2%)
 Frame = +2

Query: 146 NALQNCP---SLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPT 316
           N LQ C    SLL G++ H + +   G   DT+T N L+ +Y +  Q   A+++F     
Sbjct: 61  NLLQLCVKSRSLLVGKSCHGLAI-HFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSV 119

Query: 317 KTTQPWNILLQCYARQGMPREAMELFNSM--EGNQDV-FTFASTLKALGSASWLKQGQQV 487
           ++   WN ++  Y       EA++LF+ M  EG Q   FT +STL A  +   + + +Q+
Sbjct: 120 RSIVSWNTMIAGYTHNREDVEALKLFSRMHREGTQMTKFTLSSTLCACAAKYAIIECKQL 179

Query: 488 HALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSR 667
           H ++IKL +D + +VGT++++ Y+K     +  + A   F ++ EK  V W+++ +   +
Sbjct: 180 HTIAIKLALDSSSFVGTAVLDVYAK----CNMIKDACSIFERMPEKTSVTWSSLFAGYVQ 235

Query: 668 HARYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           +  +   + LF       I  +  T+  ++  C
Sbjct: 236 NGLHEEALCLFRSAQRGGIQLTEFTVSSILSTC 268


>gb|EMJ05752.1| hypothetical protein PRUPE_ppa016618mg, partial [Prunus persica]
          Length = 524

 Score =  113 bits (282), Expect = 8e-23
 Identities = 73/238 (30%), Positives = 126/238 (52%), Gaps = 8/238 (3%)
 Frame = +2

Query: 77  MAILSIPTTNNLHCNPLPLDHHV--NALQNCPSLLK---GRALHAIILKQGGAQMDTLTG 241
           + +L+I     +   PL  D H+  +  ++C  L +   G+++H   +K G  + D   G
Sbjct: 32  LPVLAIEYFRRMLGTPLRPDDHIYPSVTKSCAILSRRDVGQSVHGFAVKTG-FEFDVFVG 90

Query: 242 NSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQGMPREAMELFN-SMEGNQD 418
           +S++ MY +  +   A+K+F   P K    W+ ++  YA+ G   EA+ LF  ++  N D
Sbjct: 91  SSVVDMYAKCGEIRDARKMFDDIPHKNVVSWSGMIYGYAQVGEDEEALRLFKQALVQNLD 150

Query: 419 V--FTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEH 592
           V  FTF+S ++  G+++ L+ G+Q+H L  K   + + +VG+SLV  YSK        E 
Sbjct: 151 VNDFTFSSVIRVCGNSTLLELGKQIHGLCFKTNFNLSSFVGSSLVSLYSK----CGVIEG 206

Query: 593 AWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           A+R F +I  KN+  WNAM+ AC++H      + LF +M    + P+ +T   V+  C
Sbjct: 207 AYRVFDEIPVKNLGMWNAMLIACAQHVHTDKALDLFKQMGSAGMKPNFITFLCVLYAC 264


>ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329263|gb|EFH59682.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 679

 Score =  113 bits (282), Expect = 8e-23
 Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
 Frame = +2

Query: 53  TLHNPH--AWMAILSIPTTNNLHCNPLPLDHHVNALQNCP------SLLK---------- 178
           TL +P   AW +++   T  +L    L     + A   CP      S+LK          
Sbjct: 64  TLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF 123

Query: 179 GRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYA 358
           G ++H  I++ G    D  TGN+LM MY +       +K+F+  P K    +N ++  YA
Sbjct: 124 GESVHGFIVRLG-MDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYA 182

Query: 359 RQGMPREAMELFNSMEGNQ---DVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVY 529
           + GM  +A+ +   M  +    D FT +S L        + +G+++H   I+ G+D +VY
Sbjct: 183 QSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVY 242

Query: 530 VGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRM 709
           +G+SLV+ Y+K+       E + R F  ++ ++ ++WN++++   ++ RY+  + LF +M
Sbjct: 243 IGSSLVDMYAKSAR----IEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQM 298

Query: 710 LETRISPSRVTLGIVIGMC 766
           +  ++ P  V    VI  C
Sbjct: 299 VSAKVRPGAVAFSSVIPAC 317



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 3/202 (1%)
 Frame = +2

Query: 170 LLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQ 349
           +LKG+ +H  ++++G    D   G+SL+ MY +  +   ++++F     + +  WN L+ 
Sbjct: 222 VLKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVA 280

Query: 350 CYARQGMPREAMELFNSMEGNQ---DVFTFASTLKALGSASWLKQGQQVHALSIKLGVDG 520
            Y + G   EA+ LF  M   +       F+S + A    + L  G+Q+H   ++ G   
Sbjct: 281 GYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGR 340

Query: 521 NVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLF 700
           N+++ ++LV+ YSK        + A + F +++  + V+W A+I   + H   H  + LF
Sbjct: 341 NIFIASALVDMYSK----CGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLF 396

Query: 701 NRMLETRISPSRVTLGIVIGMC 766
             M    + P++V    V+  C
Sbjct: 397 EEMKRQGVKPNQVAFVAVLTAC 418



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 3/197 (1%)
 Frame = +2

Query: 176 KGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCY 355
           + + LHA  ++     +   + + ++ +Y   K   +A  +FK   +     W  +++C+
Sbjct: 23  QAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCF 80

Query: 356 ARQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNV 526
             Q +   A+  F  M  +    D   F S LK+      L+ G+ VH   ++LG+D ++
Sbjct: 81  TDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140

Query: 527 YVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNR 706
           Y G +L+  YSK      G +   + F  +  K+VV++N +I+  ++   Y   + +   
Sbjct: 141 YTGNALMNMYSK----LLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVRE 196

Query: 707 MLETRISPSRVTLGIVI 757
           M  + + P   TL  V+
Sbjct: 197 MGTSDLKPDAFTLSSVL 213


>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449474033|ref|XP_004154055.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449510921|ref|XP_004163811.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  112 bits (281), Expect = 1e-22
 Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 6/205 (2%)
 Frame = +2

Query: 170 LLKGRALHAIILKQG-GAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILL 346
           L KG+ +HA IL+ G GA +  +T  +LM MY +F   + A  +F   P K    W+ ++
Sbjct: 190 LQKGKEIHAHILRHGYGAHVHVMT--TLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMI 247

Query: 347 QCYARQGMPREAMELFNSMEGN-----QDVFTFASTLKALGSASWLKQGQQVHALSIKLG 511
            CYA+ G P EA+ELF  M  N      +  T  S L+A  + + L+QG+ +HA  ++ G
Sbjct: 248 ACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRG 307

Query: 512 VDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGI 691
           +D  + V ++L+  Y++  +     E     F ++H+K+VV WN++IS+   H      I
Sbjct: 308 LDSILPVISALITMYARCGK----LESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAI 363

Query: 692 VLFNRMLETRISPSRVTLGIVIGMC 766
            +F  M++   SPS ++   V+G C
Sbjct: 364 KIFEEMIDHGFSPSHISFISVLGAC 388



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 58/198 (29%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
 Frame = +2

Query: 200 ILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQGMPRE 379
           +L  GG   D      L+ M+ +      A+K+F  T  +T   WN L +  A  G   +
Sbjct: 94  LLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGND 153

Query: 380 AMELF---NSMEGNQDVFTFASTLKALGSA----SWLKQGQQVHALSIKLGVDGNVYVGT 538
            +EL+   N M  + D FT+   LKA  ++    S+L++G+++HA  ++ G   +V+V T
Sbjct: 154 VLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMT 213

Query: 539 SLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNR-MLE 715
           +L++ Y++    +    +A   F ++  KNVV+W+AMI+  +++ + +  + LF   ML 
Sbjct: 214 TLMDMYAR----FGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLN 269

Query: 716 TRIS-PSRVTLGIVIGMC 766
           T  S P+ VT+  V+  C
Sbjct: 270 THDSVPNSVTMVSVLQAC 287


>ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  112 bits (281), Expect = 1e-22
 Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 4/199 (2%)
 Frame = +2

Query: 182 RALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYAR 361
           ++LH  ++++G    D + GN+++ MY +      A+++F   P + +  WN L+  Y +
Sbjct: 290 KSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQ 349

Query: 362 QGMPREAMELFNSMEGNQDV----FTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVY 529
            G+  EA+E +  M+ ++ +     TF S L A      L+QG ++HALSIK+G++ +VY
Sbjct: 350 NGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVY 409

Query: 530 VGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRM 709
           VGT L++ Y+K  +       A   F K+  ++   WNA+IS    H      + LF+RM
Sbjct: 410 VGTCLIDLYAKCGK----LAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRM 465

Query: 710 LETRISPSRVTLGIVIGMC 766
            +  I P  VT   ++  C
Sbjct: 466 QQEGIKPDHVTFVSLLAAC 484



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 3/201 (1%)
 Frame = +2

Query: 152 LQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQP 331
           ++  PS      LHA  L+ G  +    T  SL+  YL+F + ++A K+F     +    
Sbjct: 77  IRAAPSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPA 136

Query: 332 WNILLQCYARQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHALSI 502
           WN +L    R     EA+ LF  M G     D  T +S L              +H  ++
Sbjct: 137 WNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAV 196

Query: 503 KLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYH 682
           K G+D  ++V  +L++ Y K        E A   F  +  +++V WN++IS C +  +  
Sbjct: 197 KHGLDKELFVCNALIDVYGK----LGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTA 252

Query: 683 HGIVLFNRMLETRISPSRVTL 745
             + +F  M  + +SP  +TL
Sbjct: 253 AALKMFQGMRGSGVSPDVLTL 273



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
 Frame = +2

Query: 335 NILLQCYARQGMPREAMELFNSMEG-----NQDVFTFASTLKALGSASWLKQGQQVHALS 499
           N L+  ++R  +PR A  L   +         D FTF S ++A  S +      Q+HA +
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNA---SAAQLHACA 93

Query: 500 IKLG-VDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHAR 676
           ++LG V  +V+   SLV  Y +    +     A++ F ++ E++V AWNAM+S   R+AR
Sbjct: 94  LRLGLVRPSVFTSGSLVHAYLR----FGRISEAYKVFDEMSERDVPAWNAMLSGLCRNAR 149

Query: 677 YHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
               + LF RM+   ++   VT+  V+ MC
Sbjct: 150 AAEAVGLFGRMVGEGVAGDTVTVSSVLPMC 179


>gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
           gi|125586550|gb|EAZ27214.1| hypothetical protein
           OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  112 bits (281), Expect = 1e-22
 Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 4/211 (1%)
 Frame = +2

Query: 146 NALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTT 325
           +A+  C  +  GR++H  ++++G    D + GN+++ MY +  +   A+++F   P +  
Sbjct: 279 SAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDA 338

Query: 326 QPWNILLQCYARQGMPREAMELFNSMEGNQDV----FTFASTLKALGSASWLKQGQQVHA 493
             WN L+  Y + G+  EA+ +++ M+ ++ +     TF S L A      L+QG ++HA
Sbjct: 339 VSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHA 398

Query: 494 LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
           LSIK G++ +VYVGT +++ Y+K  +     + A   F +   ++   WNA+IS    H 
Sbjct: 399 LSIKTGLNLDVYVGTCVIDLYAKCGK----LDEAMLLFEQTPRRSTGPWNAVISGVGVHG 454

Query: 674 RYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
                + LF++M +  ISP  VT   ++  C
Sbjct: 455 HGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
 Frame = +2

Query: 335 NILLQCYARQGMPREAMELFNSMEGNQ-------DVFTFASTLKALGSASWLKQGQQVHA 493
           N L+  ++R  +PR A+ L   +  +        D FTF   L+A   A       Q+HA
Sbjct: 36  NTLISAFSRASLPRLALPLLRHLLLSSPLLPLRPDAFTFPPLLRA---AQGPGTAAQLHA 92

Query: 494 LSIKLGV-DGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRH 670
            +++LG+  G+ +   +LV  Y +    +     A+R+F ++  ++V AWNAM+S   R+
Sbjct: 93  CALRLGLLRGDAFASGALVHAYLR----FGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148

Query: 671 ARYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           AR    + LF RM+   ++   VT+  V+ MC
Sbjct: 149 ARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMC 180



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 3/189 (1%)
 Frame = +2

Query: 188 LHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQG 367
           LHA  L+ G  + D     +L+  YL+F +   A + F     +    WN +L    R  
Sbjct: 90  LHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNA 149

Query: 368 MPREAMELFNS--MEG-NQDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGT 538
              EA+ LF    MEG   D  T +S L              +H  ++K G+D  ++V  
Sbjct: 150 RAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCN 209

Query: 539 SLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLET 718
           ++++ Y K        E   + F  +  +++V WN++IS   +  +    + +F  M ++
Sbjct: 210 AMIDVYGK----LGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDS 265

Query: 719 RISPSRVTL 745
            +SP  +TL
Sbjct: 266 GVSPDVLTL 274



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 4/201 (1%)
 Frame = +2

Query: 125 LPLDHHVNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFK 304
           LP   H+ ALQ      +G  +HA+ +K G   +D   G  ++ +Y +  +  +A  +F+
Sbjct: 381 LPAYSHLGALQ------QGTRMHALSIKTG-LNLDVYVGTCVIDLYAKCGKLDEAMLLFE 433

Query: 305 GTPTKTTQPWNILLQCYARQGMPREAMELFNSMEG---NQDVFTFASTLKALGSASWLKQ 475
            TP ++T PWN ++      G   +A+ LF+ M+    + D  TF S L A   A  + Q
Sbjct: 434 QTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQ 493

Query: 476 GQQV-HALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMI 652
           G+   + +    G+         +V+ + +  +    F+       K    +   W A++
Sbjct: 494 GRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIK---PDSAIWGALL 550

Query: 653 SACSRHARYHHGIVLFNRMLE 715
            AC  H     G V    + E
Sbjct: 551 GACRIHGNVEMGKVASQNLFE 571


>ref|XP_004510764.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial-like [Cicer arietinum]
          Length = 650

 Score =  112 bits (280), Expect = 1e-22
 Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 3/199 (1%)
 Frame = +2

Query: 179 GRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYA 358
           G  LH   +K G   +D   G +L+ +Y +      A+++F   P +    WN+++ CYA
Sbjct: 183 GVMLHCFTVKVG-FDLDCFVGCALVDLYAKCGFVENARRVFCVAPCRDLVMWNVMISCYA 241

Query: 359 RQGMPREAMELFNSME---GNQDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVY 529
              +P+EA  LFNSM     N D FTF+S L       +   G+QVH L ++   D +V 
Sbjct: 242 FNCLPQEAFRLFNSMRFEVANGDEFTFSSLLSLSDDLEYYNFGKQVHGLVLRQSFDSDVL 301

Query: 530 VGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRM 709
           V ++L+  Y+KN+        A R F ++  +NVVAWN MI  C  H   +  + L   M
Sbjct: 302 VASALINMYAKND----NIIDACRVFDEMSIRNVVAWNTMIVGCGNHGDGNEVMKLLKEM 357

Query: 710 LETRISPSRVTLGIVIGMC 766
           L     P  +T+  VI  C
Sbjct: 358 LREGFLPDELTISSVISSC 376



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
 Frame = +2

Query: 89  SIPTTNNLHCNPLPLDHH--VNALQNCPS---LLKGRALHAIILKQGGAQMDTLTGNSLM 253
           SIP  +  H N     H    NAL+       L +G+ LHA ++K G  Q+ +L  N ++
Sbjct: 41  SIPIPDQTHFNDPNTIHLFCANALKLSAKKSYLPEGKQLHAHLIKLGFCQVLSLQ-NQIL 99

Query: 254 GMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQGMPRE------AMELFNSMEGNQ 415
            +YL+ KQT  A+K+F     +    WNI+++   R     E          F  M    
Sbjct: 100 SVYLKCKQTKDAQKLFDELSVRNVVSWNIMIRGIVRCDNENELDCLQLCFSYFRRMLMEM 159

Query: 416 ---DVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGF 586
              D  TF   +        ++ G  +H  ++K+G D + +VG +LV+ Y+K      GF
Sbjct: 160 VVPDYITFNGLICLCAQFHDIEMGVMLHCFTVKVGFDLDCFVGCALVDLYAK-----CGF 214

Query: 587 -EHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRM 709
            E+A R FC    +++V WN MIS  + +        LFN M
Sbjct: 215 VENARRVFCVAPCRDLVMWNVMISCYAFNCLPQEAFRLFNSM 256



 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 3/199 (1%)
 Frame = +2

Query: 179 GRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYA 358
           G+ +H ++L+Q     D L  ++L+ MY +      A ++F     +    WN ++    
Sbjct: 284 GKQVHGLVLRQS-FDSDVLVASALINMYAKNDNIIDACRVFDEMSIRNVVAWNTMIVGCG 342

Query: 359 RQGMPREAMELFNSM--EGN-QDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVY 529
             G   E M+L   M  EG   D  T +S + + G AS + +  Q HA ++KL     + 
Sbjct: 343 NHGDGNEVMKLLKEMLREGFLPDELTISSVISSCGYASAITETLQAHAFAVKLSCQDFLS 402

Query: 530 VGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRM 709
           V  SL+  YSK          A + F    + ++V W ++I A + H      I +F +M
Sbjct: 403 VPNSLISAYSK----CGSITSALKCFELTSKPDLVTWTSLIYAYAFHGLAKEAIEIFEKM 458

Query: 710 LETRISPSRVTLGIVIGMC 766
           +   I P R+     +  C
Sbjct: 459 ISCGIIPDRIAXXXXLSAC 477


>ref|XP_002319164.2| pentatricopeptide repeat-containing family protein, partial [Populus
            trichocarpa] gi|550325034|gb|EEE95087.2|
            pentatricopeptide repeat-containing family protein,
            partial [Populus trichocarpa]
          Length = 928

 Score =  112 bits (279), Expect = 2e-22
 Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 3/211 (1%)
 Frame = +2

Query: 143  VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
            ++A     +L +GR +HA     G ++ D   GN+L+ +Y +  +  +A   F+    K 
Sbjct: 453  ISACAGIQALNQGRQIHAQSYVSGYSE-DLSIGNALVSLYARCGRIKEAYLEFEKIDAKD 511

Query: 323  TQPWNILLQCYARQGMPREAMELFNSMEGNQ---DVFTFASTLKALGSASWLKQGQQVHA 493
            +  WN L+  +A+ G   +A+++F  M   +     FTF S + A  + + +KQG+Q+HA
Sbjct: 512  SISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA 571

Query: 494  LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
            + IK G D ++ V  +L+ FY+K        E A R FC++ EKN V+WNAMI+  S+H 
Sbjct: 572  MIIKRGFDSDIEVSNALITFYAK----CGSIEDARREFCEMPEKNDVSWNAMITGYSQHG 627

Query: 674  RYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
              +  + LF +M +    P+ VT   V+  C
Sbjct: 628  YGNEAVNLFEKMKQVGEMPNHVTFVGVLSAC 658



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 4/204 (1%)
 Frame = +2

Query: 167 SLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILL 346
           +L KG  LH+ ++K  G   D +   +L+ +Y+       A ++F    T+    WN++L
Sbjct: 259 ALCKGEQLHSYVIK-AGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVML 317

Query: 347 QCYARQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHALSIKLGVD 517
             + +     E+  +F  M+      + FT+ S L+   S   L  G+Q+H   IK G  
Sbjct: 318 VAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQ 377

Query: 518 GNVYVGTSLVEFYSKNEEGYHG-FEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIV 694
            NVYV + L++ Y+K     HG  + A      + E +VV+W A+IS  ++H  +   + 
Sbjct: 378 FNVYVCSVLIDMYAK-----HGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALK 432

Query: 695 LFNRMLETRISPSRVTLGIVIGMC 766
            F  ML   I    +     I  C
Sbjct: 433 HFKEMLNRGIQSDNIGFSSAISAC 456



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
 Frame = +2

Query: 179 GRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYA 358
           G  LHA++ K G + ++T   N+L+ +Y +      A+K+F    +K    +N L+   A
Sbjct: 162 GEQLHALVFKYGSS-LETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLA 220

Query: 359 RQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVY 529
           +QG    A+ELF  M+ +    D  T AS L A  S   L +G+Q+H+  IK G+  ++ 
Sbjct: 221 QQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMI 280

Query: 530 VGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRM 709
           V  +L++ Y    +     + A   F     +NVV WN M+ A  +         +F +M
Sbjct: 281 VEGALLDLYVNCSD----IKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQM 336

Query: 710 LETRISPSRVTLGIVIGMC 766
               + P++ T   ++  C
Sbjct: 337 QIKGLIPNQFTYPSILRTC 355



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 3/196 (1%)
 Frame = +2

Query: 188 LHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQG 367
           +HA I+  G      +  N L+G+Y +      A+K+F    TK +  W  ++  +++ G
Sbjct: 64  IHARIICHG-LLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 122

Query: 368 MPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGT 538
              EA+ LF  M         + F+S L           G+Q+HAL  K G     YV  
Sbjct: 123 YEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCN 182

Query: 539 SLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLET 718
           +LV  YS+       F  A + F K+  K+ V++N++IS  ++       + LF +M   
Sbjct: 183 ALVTLYSR----MPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRD 238

Query: 719 RISPSRVTLGIVIGMC 766
            + P  VT+  ++  C
Sbjct: 239 YLKPDCVTVASLLSAC 254



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
 Frame = +2

Query: 152 LQNCPS---LLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
           L+ C S   L  G  +H  ++K G  Q +    + L+ MY +  +   A  I +      
Sbjct: 352 LRTCTSVGALDLGEQIHTQVIKTG-FQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDD 410

Query: 323 TQPWNILLQCYARQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHA 493
              W  L+  YA+  +  EA++ F  M       D   F+S + A      L QG+Q+HA
Sbjct: 411 VVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHA 470

Query: 494 LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
            S   G   ++ +G +LV  Y++        + A+  F KI  K+ ++WN +IS  ++  
Sbjct: 471 QSYVSGYSEDLSIGNALVSLYARCGR----IKEAYLEFEKIDAKDSISWNGLISGFAQSG 526

Query: 674 RYHHGIVLFNRMLETRISPSRVTLGIVI 757
                + +F +M   ++  S  T G  +
Sbjct: 527 YCEDALKVFAQMNRAKLEASFFTFGSAV 554


>ref|XP_002441855.1| hypothetical protein SORBIDRAFT_08g003540 [Sorghum bicolor]
           gi|241942548|gb|EES15693.1| hypothetical protein
           SORBIDRAFT_08g003540 [Sorghum bicolor]
          Length = 501

 Score =  111 bits (278), Expect = 2e-22
 Identities = 64/198 (32%), Positives = 109/198 (55%), Gaps = 3/198 (1%)
 Frame = +2

Query: 182 RALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYAR 361
           R LH I +K      ++  G + + +Y +      A  +F+  P KT   W+ L     +
Sbjct: 177 RQLHTIAIKLA-LDSNSFVGTAFLDVYAKCNMINDACLVFEKIPEKTAVTWSTLFAGLVQ 235

Query: 362 QGMPREAMELFNSM--EGNQ-DVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYV 532
            G+ ++A+ LF S   EG Q   FT ++ L    S + + +G+Q+HA+ IK G +GN++V
Sbjct: 236 NGLHKDALRLFQSSQREGIQLTEFTLSAILSTCASLALMIEGRQLHAVIIKYGFNGNLFV 295

Query: 533 GTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRML 712
            +SLV+ Y++  +     E A+  F  +  KNVV WNAMI++ +RH +    ++LF +M 
Sbjct: 296 ASSLVDVYARCGQ----IEEAYLVFADMKHKNVVLWNAMIASFTRHGKSWEAMILFEKMQ 351

Query: 713 ETRISPSRVTLGIVIGMC 766
           ++ ISP+ VT   ++ MC
Sbjct: 352 QSGISPNEVTYVSMMSMC 369



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 6/211 (2%)
 Frame = +2

Query: 152 LQNCP---SLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
           LQ C    SLL G+  H + +  G A  DT+T N LM +Y +  +   A+ +F     ++
Sbjct: 63  LQQCAKRRSLLVGKGCHGLAIHLGLAT-DTITCNILMNLYTKCGRNDCARDVFDAMSFRS 121

Query: 323 TQPWNILLQCYARQGMPREAMELFNSM--EGNQ-DVFTFASTLKALGSASWLKQGQQVHA 493
              WN ++  Y   G   +A++LF+ M  EG +   FT +STL A  + +   + +Q+H 
Sbjct: 122 IVSWNTMIAGYTCHGDGLQALKLFSKMHQEGTRMSEFTLSSTLCACAAENATTECRQLHT 181

Query: 494 LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
           ++IKL +D N +VGT+ ++ Y+K     +    A   F KI EK  V W+ + +   ++ 
Sbjct: 182 IAIKLALDSNSFVGTAFLDVYAK----CNMINDACLVFEKIPEKTAVTWSTLFAGLVQNG 237

Query: 674 RYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
            +   + LF       I  +  TL  ++  C
Sbjct: 238 LHKDALRLFQSSQREGIQLTEFTLSAILSTC 268


>ref|XP_006651472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Oryza brachyantha]
          Length = 749

 Score =  111 bits (277), Expect = 3e-22
 Identities = 59/211 (27%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
 Frame = +2

Query: 146 NALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTT 325
           +A+  C     GR++H  ++++G    D + GN+++ MY +  +   A+++F   P +  
Sbjct: 280 SAIAQCGDKCGGRSVHCYMIRRGWDVGDIIAGNAIVDMYAKLSEIEAAQRMFDSMPVRDA 339

Query: 326 QPWNILLQCYARQGMPREAMELFNSMEGNQDV----FTFASTLKALGSASWLKQGQQVHA 493
             WN L+  Y + G+  +A+  +N M+ ++ +     TF S L A      L+QG ++HA
Sbjct: 340 VSWNTLITGYMQNGLSSDAIHAYNHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHA 399

Query: 494 LSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
           LS+K G++ ++YVGT L++ Y+K  +     + A   F ++  ++   WNA+I+    H 
Sbjct: 400 LSVKTGLNLDLYVGTCLIDLYAKCGK----LDEAMLLFEQMARRSTGPWNAVIAGLGVHG 455

Query: 674 RYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
                + LF++M +  ISP  VT   ++  C
Sbjct: 456 HGAKALSLFSQMQQEGISPDHVTFVSLLAAC 486



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 3/189 (1%)
 Frame = +2

Query: 188 LHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQG 367
           LHA  L+ G          +L+  YL+F    +A + F   P +    WN ++    R  
Sbjct: 91  LHACALRLGLVPTSVFVSGALVHAYLRFGSVREAYRAFDEMPDRDVAAWNAMVSGLCRNA 150

Query: 368 MPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGT 538
              EA+ LF  M G     D  T +S L              +H  ++K G+D  ++V  
Sbjct: 151 RAGEAVGLFGRMVGEGVAGDAVTVSSVLPMCALLGDRALALVMHLYAVKHGLDDELFVCN 210

Query: 539 SLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLET 718
           ++++ Y K        E A + F  +  +++V WN++IS   +  +    + +F+ M ++
Sbjct: 211 AMIDVYGK----LGILEEARKVFDGMTSRDLVTWNSIISGHEQGGQVASAVEMFHGMRDS 266

Query: 719 RISPSRVTL 745
            +SP  +TL
Sbjct: 267 EVSPDVLTL 275



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
 Frame = +2

Query: 335 NILLQCYARQGMPREAMELFNSMEG-----NQDVFTFASTLKA-LGSASWLKQGQQVHAL 496
           N L+  ++   +PR A+ L   +         D FTF   ++A  G AS      Q+HA 
Sbjct: 39  NTLISAFSGASLPRLALPLLRHLLSCARPLRPDAFTFPPLVRASAGPAS----AAQLHAC 94

Query: 497 SIKLG-VDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHA 673
           +++LG V  +V+V  +LV  Y +    +     A+R+F ++ +++V AWNAM+S   R+A
Sbjct: 95  ALRLGLVPTSVFVSGALVHAYLR----FGSVREAYRAFDEMPDRDVAAWNAMVSGLCRNA 150

Query: 674 RYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           R    + LF RM+   ++   VT+  V+ MC
Sbjct: 151 RAGEAVGLFGRMVGEGVAGDAVTVSSVLPMC 181



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 4/209 (1%)
 Frame = +2

Query: 125 LPLDHHVNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFK 304
           LP   H+ ALQ      +G  +HA+ +K G   +D   G  L+ +Y +  +  +A  +F+
Sbjct: 382 LPAYSHLGALQ------QGTRMHALSVKTG-LNLDLYVGTCLIDLYAKCGKLDEAMLLFE 434

Query: 305 GTPTKTTQPWNILLQCYARQGMPREAMELFNSMEG---NQDVFTFASTLKALGSASWLKQ 475
               ++T PWN ++      G   +A+ LF+ M+    + D  TF S L A   A  + Q
Sbjct: 435 QMARRSTGPWNAVIAGLGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQ 494

Query: 476 GQQV-HALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMI 652
           G+   + +    G+         +V+   ++ +    FE       K    +   W A++
Sbjct: 495 GRDFFNMMQTSYGIMPVAKHYACMVDMLGRSGQLDDAFEFIQNMPIK---PDSAIWGALL 551

Query: 653 SACSRHARYHHGIVLFNRMLETRISPSRV 739
            AC  H     G V    +  T + P  V
Sbjct: 552 GACRIHGNVEMGKVASQNL--TELDPENV 578


>ref|XP_002322250.2| hypothetical protein POPTR_0015s10720g [Populus trichocarpa]
           gi|550322450|gb|EEF06377.2| hypothetical protein
           POPTR_0015s10720g [Populus trichocarpa]
          Length = 704

 Score =  111 bits (277), Expect = 3e-22
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 3/199 (1%)
 Frame = +2

Query: 179 GRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYA 358
           GR LHA  LK G    D     +L+ MY +      A+ +F+  P KTT  WN ++  YA
Sbjct: 251 GRQLHACTLKMGIGD-DIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYA 309

Query: 359 RQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVY 529
             G   EA++++  M  +    D FTF+  ++     + ++  +Q HA  I+ G   ++ 
Sbjct: 310 LHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIV 369

Query: 530 VGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRM 709
             T+LV+FYSK    +   E A   F K+  KNV++WNA+I     H R    + LF +M
Sbjct: 370 ANTALVDFYSK----WGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQM 425

Query: 710 LETRISPSRVTLGIVIGMC 766
           ++ R++P+ +T   V+  C
Sbjct: 426 IQERMNPNHITFLAVLSAC 444



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
 Frame = +2

Query: 215 GAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQGMPREAMELF 394
           G + D    N ++ M+++      A+++F   P +    WN ++      G   EA  LF
Sbjct: 161 GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLF 220

Query: 395 -NSMEGNQDV--FTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKN 565
            N  E   D   FTFA  ++A      +  G+Q+HA ++K+G+  +++V  +L++ YSK 
Sbjct: 221 LNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSK- 279

Query: 566 EEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTL 745
                  E A   F ++ EK  V WN +I+  + H      + ++  M ++ +     T 
Sbjct: 280 ---CGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 336

Query: 746 GIVIGMC 766
            +++ +C
Sbjct: 337 SMIVRIC 343


>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  110 bits (276), Expect = 4e-22
 Identities = 70/219 (31%), Positives = 114/219 (52%), Gaps = 3/219 (1%)
 Frame = +2

Query: 119 NPLPLDHHVNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKI 298
           N   L   + A    PS   GR LHA  LK G   M+   G+SL+ MY ++    +AK I
Sbjct: 205 NEFTLSSLLKASGTGPSDHHGRQLHAFSLKYG-YDMNVHVGSSLLDMYARWAHMREAKVI 263

Query: 299 FKGTPTKTTQPWNILLQCYARQGMPREAMELFNSM--EGNQDV-FTFASTLKALGSASWL 469
           F     K    WN L+  +AR+G     M LF  M  +G +   FT++S   A  S+  L
Sbjct: 264 FNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSL 323

Query: 470 KQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAM 649
           +QG+ VHA  IK G     Y+G +L++ Y+K+       + A + F ++ ++++V+WN++
Sbjct: 324 EQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKS----GSIKDAKKVFRRLVKQDIVSWNSI 379

Query: 650 ISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           IS  ++H      + LF +ML+ ++ P+ +T   V+  C
Sbjct: 380 ISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC 418



 Score =  105 bits (261), Expect = 2e-20
 Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 3/202 (1%)
 Frame = +2

Query: 170 LLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQ 349
           L +GRA+HA I +    + D +  N ++ MY +     +A+ +F   PTK    W +L+ 
Sbjct: 121 LKQGRAIHAHI-QSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLIS 179

Query: 350 CYARQGMPREAMELFNSMEG---NQDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDG 520
            Y++ G   EA+ LF  M       + FT +S LKA G+      G+Q+HA S+K G D 
Sbjct: 180 GYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDM 239

Query: 521 NVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLF 700
           NV+VG+SL++ Y++    +     A   F  +  KNVV+WNA+I+  +R     H + LF
Sbjct: 240 NVHVGSSLLDMYAR----WAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLF 295

Query: 701 NRMLETRISPSRVTLGIVIGMC 766
            +ML     P+  T   V   C
Sbjct: 296 LQMLRQGFEPTHFTYSSVFTAC 317



 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 5/188 (2%)
 Frame = +2

Query: 167 SLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILL 346
           SL +G+ +HA ++K GG Q     GN+L+ MY +      AKK+F+    +    WN ++
Sbjct: 322 SLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSII 380

Query: 347 QCYARQGMPREAMELFNSM---EGNQDVFTFASTLKALGSASWLKQGQQVHALSIKLGVD 517
             YA+ G+  EA++LF  M   +   +  TF S L A   +  L +GQ    L  K  ++
Sbjct: 381 SGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIE 440

Query: 518 GNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIH--EKNVVAWNAMISACSRHARYHHGI 691
             V    ++V+       G  G  +    F +    +     W A++ +C  H     G+
Sbjct: 441 AQVAHHVTVVDLL-----GRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGV 495

Query: 692 VLFNRMLE 715
               ++ E
Sbjct: 496 YAAEQIFE 503


>ref|XP_002322703.2| hypothetical protein POPTR_0016s05390g [Populus trichocarpa]
           gi|550320891|gb|EEF04464.2| hypothetical protein
           POPTR_0016s05390g [Populus trichocarpa]
          Length = 627

 Score =  110 bits (275), Expect = 5e-22
 Identities = 71/223 (31%), Positives = 118/223 (52%), Gaps = 7/223 (3%)
 Frame = +2

Query: 119 NPLPLDH-HVNALQNCPSLLK---GRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQ 286
           N  P DH   +A + C  L +   G+++H +++K G   +D   G+SL+ MY +     +
Sbjct: 150 NLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTG-YDVDVFVGSSLVDMYAKCGDIKE 208

Query: 287 AKKIFKGTPTKTTQPWNILLQCYARQGMPREAMELFNS--MEG-NQDVFTFASTLKALGS 457
           A+ +F   P +    W+ ++  Y + G   EAM LF    +EG + + FT +S ++  GS
Sbjct: 209 ARNVFDEMPQRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGS 268

Query: 458 ASWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVA 637
           A+ L+ G+Q+H L  K   D + +VG+SL+  YSK        E A+R F ++  KN+  
Sbjct: 269 ATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSK----CGLIEGAYRVFDEVPIKNLGM 324

Query: 638 WNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVIGMC 766
           WNAM+ AC++HA       LF +M    + P+ +T   V+  C
Sbjct: 325 WNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYAC 367



 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 3/203 (1%)
 Frame = +2

Query: 167 SLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILL 346
           SLLKG+ +HA I+K  G Q+  L  + L+  Y + +    + ++F+ +  K++  W+ ++
Sbjct: 69  SLLKGQQIHAHIIK-SGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVI 127

Query: 347 QCYARQGMPREAMELFNSMEGNQ---DVFTFASTLKALGSASWLKQGQQVHALSIKLGVD 517
             +A+   P  A++ F  M G     D   F S  KA         G+ VH L IK G D
Sbjct: 128 SSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYD 187

Query: 518 GNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVL 697
            +V+VG+SLV+ Y+K  +     + A   F ++ ++NVV+W+ MI   ++   +   + L
Sbjct: 188 VDVFVGSSLVDMYAKCGD----IKEARNVFDEMPQRNVVSWSGMIYGYTQLGEHEEAMRL 243

Query: 698 FNRMLETRISPSRVTLGIVIGMC 766
           F   L   +  +  TL  VI +C
Sbjct: 244 FKEALLEGLDVNDFTLSSVIRVC 266


>gb|EMJ00195.1| hypothetical protein PRUPE_ppa002176mg [Prunus persica]
          Length = 705

 Score =  110 bits (275), Expect = 5e-22
 Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
 Frame = +2

Query: 176 KGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCY 355
           K R++H  IL++     D + GN+++ MY +      A+ +F+G P K    WN L+  Y
Sbjct: 248 KSRSVHGFILRRDFFVQDVVIGNAVVDMYAKLGAIYSARTVFEGLPIKDVISWNTLITGY 307

Query: 356 ARQGMPREAMELFNSMEGNQDVF----TFASTLKALGSASWLKQGQQVHALSIKLGVDGN 523
           A+ G+  EA+E++  M+  +++     T+ S L A  S   L+QG ++H   IK  +D +
Sbjct: 308 AQNGLASEAIEVYRMMQEYKEIIPNHGTWVSILPAYTSVGALQQGMKIHGRVIKNCLDLD 367

Query: 524 VYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFN 703
           V+VGT L++ Y+K        + A   F ++  K+ + WNA+IS+   H      + LF 
Sbjct: 368 VFVGTCLIDMYAKCGR----LDDALLLFSQVPRKSAIPWNAVISSHGVHGHGEKALKLFK 423

Query: 704 RMLETRISPSRVTLGIVIGMC 766
            ML+  + P  VT   ++  C
Sbjct: 424 DMLDEGVKPDHVTFVSLLSAC 444



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 3/201 (1%)
 Frame = +2

Query: 152 LQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQP 331
           L+ C +L+ G+ +H  ILK G  + D     SL+ +Y +F     A ++F   P +    
Sbjct: 38  LKACQNLVDGKRIHCQILKLG-FEWDVFVAASLVHLYSRFGFVGIACRLFDEMPIRDVGS 96

Query: 332 WNILLQCYARQGMPREAMELFNSMEGN---QDVFTFASTLKALGSASWLKQGQQVHALSI 502
           WN ++  + + G   +A+++   M  +    D  T  S L A   +  +  G  +H   I
Sbjct: 97  WNAMISGFCQNGNAADALDVLIEMRSDGVKMDRVTATSLLTACAQSGDILSGMLIHLYVI 156

Query: 503 KLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYH 682
           K G+D ++ +  +L+  YSK    +    HA R F ++  +++V+WN++I+A  ++    
Sbjct: 157 KHGLDFDLLICNALINMYSK----FGSLGHARRIFDQMDIRDLVSWNSIIAAYEQNDDPM 212

Query: 683 HGIVLFNRMLETRISPSRVTL 745
             + LF  M    I P  +TL
Sbjct: 213 TALGLFYSMQLLGIQPDFLTL 233



 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
 Frame = +2

Query: 170 LLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQ 349
           +L G  +H  ++K G    D L  N+L+ MY +F     A++IF     +    WN ++ 
Sbjct: 145 ILSGMLIHLYVIKHG-LDFDLLICNALINMYSKFGSLGHARRIFDQMDIRDLVSWNSIIA 203

Query: 350 CYARQGMPREAMELFNSME--GNQ-DVFTFASTLKALGSASWLKQGQQVHALSIKLG-VD 517
            Y +   P  A+ LF SM+  G Q D  T  S    L   S   + + VH   ++     
Sbjct: 204 AYEQNDDPMTALGLFYSMQLLGIQPDFLTLVSLASILAQLSDAAKSRSVHGFILRRDFFV 263

Query: 518 GNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVL 697
            +V +G ++V+ Y+K    Y     A   F  +  K+V++WN +I+  +++      I +
Sbjct: 264 QDVVIGNAVVDMYAKLGAIY----SARTVFEGLPIKDVISWNTLITGYAQNGLASEAIEV 319

Query: 698 FNRMLE 715
           +  M E
Sbjct: 320 YRMMQE 325



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
 Frame = +2

Query: 341 LLQCYARQGMPREAMELFNSM---EG-NQDVFTFASTLKALGSASWLKQGQQVHALSIKL 508
           ++  Y R G  REA++ F+      G   D +TF   LKA  +   L  G+++H   +KL
Sbjct: 1   MVSAYVRSGHFREAIDCFSQFLLTSGLRPDFYTFPPVLKACQN---LVDGKRIHCQILKL 57

Query: 509 GVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHG 688
           G + +V+V  SLV  YS+   G+ G   A R F ++  ++V +WNAMIS   ++      
Sbjct: 58  GFEWDVFVAASLVHLYSR--FGFVGI--ACRLFDEMPIRDVGSWNAMISGFCQNGNAADA 113

Query: 689 IVLFNRMLETRISPSRVTLGIVIGMC 766
           + +   M    +   RVT   ++  C
Sbjct: 114 LDVLIEMRSDGVKMDRVTATSLLTAC 139


>ref|XP_001764438.1| predicted protein [Physcomitrella patens]
           gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella
           patens] gi|162684302|gb|EDQ70705.1| predicted protein
           [Physcomitrella patens]
          Length = 868

 Score =  110 bits (275), Expect = 5e-22
 Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
 Frame = +2

Query: 218 AQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQGMPREAMELFN 397
           A  + +   S + MY++    + A+K+F   PT+    WN+++  YA+ G   +  EL +
Sbjct: 426 ANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLS 485

Query: 398 SM--EGNQ-DVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNE 568
           SM  EG Q D  T  + L+A G+ + L++G+ VHA ++KLG++ +  V TSL+  YSK  
Sbjct: 486 SMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCG 545

Query: 569 EGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLG 748
           +       A   F K+  ++ VAWNAM++   +H      + LF RML+ R+SP+ +TL 
Sbjct: 546 Q----VAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLT 601

Query: 749 IVIGMC 766
            VI  C
Sbjct: 602 AVISAC 607



 Score =  103 bits (258), Expect = 5e-20
 Identities = 58/191 (30%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
 Frame = +2

Query: 203 LKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKTTQPWNILLQCYARQGMPREA 382
           L + G ++D   GNSL+  Y +F+    A+++F+    +    W+ ++  YA    P +A
Sbjct: 82  LDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKA 141

Query: 383 MELFNSMEG---NQDVFTFASTLKALGSASWLKQGQQVHALSIKLGVDGNVYVGTSLVEF 553
            + F  M       +  TF S LKA  + S L++G+++H +   +G++ +V V T+L+  
Sbjct: 142 FDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITM 201

Query: 554 YSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRMLETRISPS 733
           YSK  E       A   F K+ E+NVV+W A+I A ++H + +    L+ +ML+  ISP+
Sbjct: 202 YSKCGE----ISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPN 257

Query: 734 RVTLGIVIGMC 766
            VT   ++  C
Sbjct: 258 AVTFVSLLNSC 268



 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 53/231 (22%), Positives = 106/231 (45%), Gaps = 8/231 (3%)
 Frame = +2

Query: 98  TTNNLHCNPLPLDHHVNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQ 277
           T  N+  N +     + A  N   L KGR +H I+ K  G + D     +L+ MY +  +
Sbjct: 149 TDANIEPNRITFLSILKACNNYSILEKGRKIHTIV-KAMGMETDVAVATALITMYSKCGE 207

Query: 278 TTQAKKIFKGTPTKTTQPWNILLQCYARQGMPREAMELFNSMEG---NQDVFTFASTLKA 448
            + A ++F     +    W  ++Q  A+     EA EL+  M     + +  TF S L +
Sbjct: 208 ISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNS 267

Query: 449 LGSASWLKQGQQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKN 628
             +   L +G+++H+   + G++ ++ V  +L+  Y K     +  + A   F ++ +++
Sbjct: 268 CNTPEALNRGRRIHSHISERGLETDMIVANALITMYCK----CNSVQEAREIFDRMSKRD 323

Query: 629 VVAWNAMISACSRHARYHHGIV-----LFNRMLETRISPSRVTLGIVIGMC 766
           V++W+AMI+  ++        +     L  RM    + P++VT   ++  C
Sbjct: 324 VISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRAC 374



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 35/243 (14%)
 Frame = +2

Query: 143 VNALQNCPSLLKGRALHAIILKQGGAQMDTLTGNSLMGMYLQFKQTTQAKKIFKGTPTKT 322
           +N+     +L +GR +H+ I ++G  + D +  N+L+ MY +     +A++IF     + 
Sbjct: 265 LNSCNTPEALNRGRRIHSHISERG-LETDMIVANALITMYCKCNSVQEAREIFDRMSKRD 323

Query: 323 TQPWNILLQCYARQGMP-REAM-ELFNSMEG--NQDVF----TFASTLKALGSASWLKQG 478
              W+ ++  YA+ G   +E++ E+F  +E    + VF    TF S L+A  +   L+QG
Sbjct: 324 VISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQG 383

Query: 479 QQVHALSIKLGVDGNVYVGTSLVEFYSKNEEGYHGFE----------HAWRSFCKIHEK- 625
           +Q+HA   K+G + +  + T++   Y+K    Y   +           AW SF  ++ K 
Sbjct: 384 RQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKC 443

Query: 626 ----------------NVVAWNAMISACSRHARYHHGIVLFNRMLETRISPSRVTLGIVI 757
                           NVV+WN MI+  +++        L + M      P RVT+  ++
Sbjct: 444 GDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITIL 503

Query: 758 GMC 766
             C
Sbjct: 504 EAC 506



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
 Frame = +2

Query: 359 RQGMPREAMELFNSMEGNQDVF---TFASTLKALGSASWLKQGQQVHALSIKLGVDGNVY 529
           + G  REA++L   ++    +    T+   ++    A   + G+ VH    +LGV+ ++Y
Sbjct: 33  KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92

Query: 530 VGTSLVEFYSKNEEGYHGFEHAWRSFCKIHEKNVVAWNAMISACSRHARYHHGIVLFNRM 709
           +G SL+ FYSK E+       A + F ++  ++VV W++MI+A + +         F RM
Sbjct: 93  LGNSLINFYSKFED----VASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM 148

Query: 710 LETRISPSRVTLGIVIGMC 766
            +  I P+R+T   ++  C
Sbjct: 149 TDANIEPNRITFLSILKAC 167