BLASTX nr result
ID: Ephedra27_contig00005259
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00005259
(842 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [A... 68 2e-12
gb|ESW20610.1| hypothetical protein PHAVU_005G001300g [Phaseolus... 57 3e-10
ref|XP_003527581.1| PREDICTED: splicing factor U2af large subuni... 55 3e-10
ref|XP_006582437.1| PREDICTED: splicing factor U2af large subuni... 55 3e-10
ref|XP_006582439.1| PREDICTED: splicing factor U2af large subuni... 55 3e-10
ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Sela... 56 4e-10
ref|XP_002329812.1| predicted protein [Populus trichocarpa] 50 1e-09
ref|XP_006377333.1| hypothetical protein POPTR_0011s04990g [Popu... 50 2e-09
ref|XP_004499572.1| PREDICTED: splicing factor U2af large subuni... 56 2e-09
ref|XP_004499573.1| PREDICTED: splicing factor U2af large subuni... 56 2e-09
ref|XP_004506427.1| PREDICTED: splicing factor U2af large subuni... 53 4e-09
ref|XP_004499574.1| PREDICTED: splicing factor U2af large subuni... 56 5e-09
ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Sela... 53 6e-09
emb|CBI25913.3| unnamed protein product [Vitis vinifera] 60 7e-09
ref|XP_001767993.1| predicted protein [Physcomitrella patens] gi... 50 8e-09
ref|XP_006467824.1| PREDICTED: splicing factor U2af large subuni... 50 8e-09
ref|XP_003635431.1| PREDICTED: splicing factor U2af large subuni... 60 8e-09
ref|XP_006449309.1| hypothetical protein CICLE_v10014912mg [Citr... 54 1e-08
ref|XP_003605459.1| Splicing factor U2af large subunit B [Medica... 53 1e-08
ref|XP_002305148.2| hypothetical protein POPTR_0004s04100g [Popu... 48 1e-08
>ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [Amborella trichopoda]
gi|548832419|gb|ERM95215.1| hypothetical protein
AMTR_s00009p00267190 [Amborella trichopoda]
Length = 491
Score = 68.2 bits (165), Expect(3) = 2e-12
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = +1
Query: 478 AALNGFKMGDKALTILHGTV-TEQPKPDQDIILQ*V*LHVAML*FALQ--GSISSTFLLI 648
AALNG KMGDK LT+ T T Q KPDQ+IIL H+A+ LQ G+ +
Sbjct: 322 AALNGLKMGDKTLTVRRATASTGQAKPDQEIILAQAQQHIALQKLVLQAGGAAVPGVAVT 381
Query: 649 VHANPAKVVCLI*IVSIVELRDDEVFQD 732
V NP KV+CL +VS EL+DDE +++
Sbjct: 382 VSENPTKVLCLTEVVSADELQDDEEYEE 409
Score = 29.6 bits (65), Expect(3) = 2e-12
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 719 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
++ +IL+DMREE KFG + VV P+ + + G +F
Sbjct: 406 EYEEILEDMREEGRKFGPLTTVVIPRPSPDGQPTPGLGKVF 446
Score = 21.2 bits (43), Expect(3) = 2e-12
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 416 GQELGTTFCV*QDPGV 463
G G FCV QDP V
Sbjct: 301 GNSKGYGFCVYQDPAV 316
>gb|ESW20610.1| hypothetical protein PHAVU_005G001300g [Phaseolus vulgaris]
Length = 599
Score = 56.6 bits (135), Expect(2) = 3e-10
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +1
Query: 430 YYFLCVTRSRCL*TSLAALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAM 600
Y L VT C AALNG KMGDK LT+ G +QPKP+Q+ IL +A+
Sbjct: 431 YQDLAVTDIAC-----AALNGIKMGDKTLTVRRANQGANPQQPKPEQESILMHAQQQIAL 485
Query: 601 L*FALQGSISSTFLLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
LQ ++ +T KVVCL VS EL+DDE +++
Sbjct: 486 QKLMLQPALVAT----------KVVCLTHAVSADELKDDEDYEE 519
Score = 35.4 bits (80), Expect(2) = 3e-10
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 722 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
+ +I+DDMR+EC KFGT+ VV P + E G +F
Sbjct: 517 YEEIVDDMRQECSKFGTLVNVVIPRPPHDGEPAAGVGKVF 556
>ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Glycine max]
Length = 605
Score = 55.5 bits (132), Expect(2) = 3e-10
Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 430 YYFLCVTRSRCL*TSLAALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAM 600
Y L VT C AALNG KMGDK LT+ G +QPKP+Q+ IL +A+
Sbjct: 437 YQDLAVTDIAC-----AALNGIKMGDKTLTVRRANQGANPQQPKPEQESILMHAQQQIAL 491
Query: 601 L*FALQGSISSTFLLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
LQ ++ +T KVVCL VS EL+DDE + +
Sbjct: 492 QKLMLQPALVAT----------KVVCLTHAVSSDELKDDEDYDE 525
Score = 36.2 bits (82), Expect(2) = 3e-10
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 722 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
+ +ILDDMR+EC KFGT+ VV P + E G +F
Sbjct: 523 YDEILDDMRQECSKFGTLVNVVIPRPPPDGEPAAGVGKVF 562
>ref|XP_006582437.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Glycine max] gi|571462974|ref|XP_006582438.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X3 [Glycine max]
Length = 409
Score = 55.5 bits (132), Expect(2) = 3e-10
Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 430 YYFLCVTRSRCL*TSLAALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAM 600
Y L VT C AALNG KMGDK LT+ G +QPKP+Q+ IL +A+
Sbjct: 241 YQDLAVTDIAC-----AALNGIKMGDKTLTVRRANQGANPQQPKPEQESILMHAQQQIAL 295
Query: 601 L*FALQGSISSTFLLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
LQ ++ +T KVVCL VS EL+DDE + +
Sbjct: 296 QKLMLQPALVAT----------KVVCLTHAVSSDELKDDEDYDE 329
Score = 36.2 bits (82), Expect(2) = 3e-10
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 722 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
+ +ILDDMR+EC KFGT+ VV P + E G +F
Sbjct: 327 YDEILDDMRQECSKFGTLVNVVIPRPPPDGEPAAGVGKVF 366
>ref|XP_006582439.1| PREDICTED: splicing factor U2af large subunit B-like isoform X4
[Glycine max]
Length = 372
Score = 55.5 bits (132), Expect(2) = 3e-10
Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 430 YYFLCVTRSRCL*TSLAALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAM 600
Y L VT C AALNG KMGDK LT+ G +QPKP+Q+ IL +A+
Sbjct: 204 YQDLAVTDIAC-----AALNGIKMGDKTLTVRRANQGANPQQPKPEQESILMHAQQQIAL 258
Query: 601 L*FALQGSISSTFLLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
LQ ++ +T KVVCL VS EL+DDE + +
Sbjct: 259 QKLMLQPALVAT----------KVVCLTHAVSSDELKDDEDYDE 292
Score = 36.2 bits (82), Expect(2) = 3e-10
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 722 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
+ +ILDDMR+EC KFGT+ VV P + E G +F
Sbjct: 290 YDEILDDMRQECSKFGTLVNVVIPRPPPDGEPAAGVGKVF 329
>ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein
SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 55.8 bits (133), Expect(2) = 4e-10
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Frame = +1
Query: 478 AALNGFKMGDKALTILHGTV---TEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFL-- 642
AALNG KMGDK LT+ T + QPKPDQ +L +A+ ALQG+ +
Sbjct: 242 AALNGLKMGDKTLTVRRATASVHSGQPKPDQANVLAQAQQQIALQKLALQGAPYYNMMMP 301
Query: 643 -----LIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
+ + P KVVCL +VS EL++D+ +++
Sbjct: 302 GVDNGMTMPETPTKVVCLKQVVSPDELKEDDEYEE 336
Score = 35.4 bits (80), Expect(2) = 4e-10
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 719 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
++ +IL+DMREEC K+G+V +V P + E+ G +F
Sbjct: 333 EYEEILEDMREECGKYGSVATLVLPRPKSDGEEVAGVGKVF 373
>ref|XP_002329812.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 49.7 bits (117), Expect(3) = 1e-09
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Frame = +1
Query: 478 AALNGFKMGDKALTILHGTVT-EQPKPDQDIILQ*V*LHVAML*FALQGSISS-----TF 639
AALNG KMGDK LT+ GT + Q + +Q+ IL H+A+ ALQ + +
Sbjct: 126 AALNGLKMGDKTLTVRRGTESGGQSRSEQENILAQAQQHIAIQKMALQAGVMNLPGVGIP 185
Query: 640 LLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
L +P+KV+CL +++ L DDE +++
Sbjct: 186 LAESSHSPSKVLCLTEAIAMEVLADDEEYEE 216
Score = 38.5 bits (88), Expect(3) = 1e-09
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 719 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
++ +IL+DMREEC KFGT+ VV P+Q E G +F
Sbjct: 213 EYEEILEDMREECCKFGTLINVVIPRPSQTEEQISGAGKVF 253
Score = 21.2 bits (43), Expect(3) = 1e-09
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 416 GQELGTTFCV*QDPGV 463
G G FCV QDP V
Sbjct: 105 GNSKGYGFCVYQDPAV 120
>ref|XP_006377333.1| hypothetical protein POPTR_0011s04990g [Populus trichocarpa]
gi|550327621|gb|ERP55130.1| hypothetical protein
POPTR_0011s04990g [Populus trichocarpa]
Length = 395
Score = 49.7 bits (117), Expect(3) = 2e-09
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Frame = +1
Query: 478 AALNGFKMGDKALTILHGTVT-EQPKPDQDIILQ*V*LHVAML*FALQGSISS-----TF 639
AALNG KMGDK LT+ GT + Q + +Q+ IL H+A+ ALQ + +
Sbjct: 225 AALNGLKMGDKTLTVRRGTESGGQSRSEQENILAQAQQHIAIQKMALQAGVMNLPGVGIP 284
Query: 640 LLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
L +P+KV+CL +++ L DDE +++
Sbjct: 285 LAESSHSPSKVLCLTEAIAMEVLADDEEYEE 315
Score = 38.5 bits (88), Expect(3) = 2e-09
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 719 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
++ +IL+DMREEC KFGT+ VV P+Q E G +F
Sbjct: 312 EYEEILEDMREECCKFGTLINVVIPRPSQTEEQISGAGKVF 352
Score = 20.4 bits (41), Expect(3) = 2e-09
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 419 QELGTTFCV*QDPGV 463
+ G FCV QDP V
Sbjct: 205 ESFGYGFCVYQDPAV 219
>ref|XP_004499572.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Cicer arietinum]
Length = 623
Score = 55.8 bits (133), Expect(2) = 2e-09
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +1
Query: 430 YYFLCVTRSRCL*TSLAALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAM 600
Y L VT C AALNG KMGDK LT+ GT QPKP+Q+ IL +A+
Sbjct: 455 YQDLAVTDIAC-----AALNGIKMGDKTLTVRRANQGTNPMQPKPEQESILMHAQQQIAL 509
Query: 601 L*FALQGSISSTFLLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
LQ ++ +T KV+CL VS EL+DDE +++
Sbjct: 510 QKLMLQPALVAT----------KVLCLTHAVSADELKDDEDYEE 543
Score = 33.1 bits (74), Expect(2) = 2e-09
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 722 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
+ +ILDDMR+EC KFG + VV P + E G +F
Sbjct: 541 YEEILDDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVF 580
>ref|XP_004499573.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Cicer arietinum]
Length = 621
Score = 55.8 bits (133), Expect(2) = 2e-09
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +1
Query: 430 YYFLCVTRSRCL*TSLAALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAM 600
Y L VT C AALNG KMGDK LT+ GT QPKP+Q+ IL +A+
Sbjct: 453 YQDLAVTDIAC-----AALNGIKMGDKTLTVRRANQGTNPMQPKPEQESILMHAQQQIAL 507
Query: 601 L*FALQGSISSTFLLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
LQ ++ +T KV+CL VS EL+DDE +++
Sbjct: 508 QKLMLQPALVAT----------KVLCLTHAVSADELKDDEDYEE 541
Score = 33.1 bits (74), Expect(2) = 2e-09
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 722 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
+ +ILDDMR+EC KFG + VV P + E G +F
Sbjct: 539 YEEILDDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVF 578
>ref|XP_004506427.1| PREDICTED: splicing factor U2af large subunit B-like [Cicer
arietinum]
Length = 576
Score = 53.1 bits (126), Expect(2) = 4e-09
Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = +1
Query: 430 YYFLCVTRSRCL*TSLAALNGFKMGDKALTILHGTV-TEQPKPDQDIILQ*V*LHVAML* 606
Y L VT C AALNG KMGDK LT+ T QPKP+Q+ IL +A+
Sbjct: 410 YQDLAVTDIAC-----AALNGIKMGDKTLTVRRANQGTTQPKPEQESILMHAQQQIALQK 464
Query: 607 FALQGSISSTFLLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
Q ++ +T KVVCL VS EL++DE F +
Sbjct: 465 LIFQPALVAT----------KVVCLTNAVSPDELKEDEDFDE 496
Score = 35.0 bits (79), Expect(2) = 4e-09
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 722 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
F +I+DDMR+EC KFGT+ VV P + + G +F
Sbjct: 494 FDEIIDDMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVF 533
>ref|XP_004499574.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Cicer arietinum]
Length = 582
Score = 55.8 bits (133), Expect(2) = 5e-09
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +1
Query: 430 YYFLCVTRSRCL*TSLAALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAM 600
Y L VT C AALNG KMGDK LT+ GT QPKP+Q+ IL +A+
Sbjct: 455 YQDLAVTDIAC-----AALNGIKMGDKTLTVRRANQGTNPMQPKPEQESILMHAQQQIAL 509
Query: 601 L*FALQGSISSTFLLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
LQ ++ +T KV+CL VS EL+DDE +++
Sbjct: 510 QKLMLQPALVAT----------KVLCLTHAVSADELKDDEDYEE 543
Score = 32.0 bits (71), Expect(2) = 5e-09
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 722 FSKILDDMREECDKFGTVDIVVGLDPAQERE 814
+ +ILDDMR+EC KFG + VV P + E
Sbjct: 541 YEEILDDMRQECSKFGNLVNVVIPRPRPDGE 571
>ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein
SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 52.8 bits (125), Expect(2) = 6e-09
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Frame = +1
Query: 478 AALNGFKMGDKALTILHGTV---TEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFL-- 642
AALNG KMGDK LT+ T + QPKPDQ +L +A L ALQG+ +
Sbjct: 242 AALNGLKMGDKTLTVRRATASVHSGQPKPDQANVLAQAQQQIA-LQLALQGAPYYNMMMP 300
Query: 643 -----LIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
+ + P KVVCL +VS EL++D+ +++
Sbjct: 301 GVDNGMTMPETPTKVVCLKQVVSPDELKEDDEYEE 335
Score = 34.7 bits (78), Expect(2) = 6e-09
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 719 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
++ +IL+DMREEC K+G+V +V P E+ G +F
Sbjct: 332 EYEEILEDMREECGKYGSVATLVLPRPKSNGEEVAGVGKVF 372
>emb|CBI25913.3| unnamed protein product [Vitis vinifera]
Length = 6467
Score = 59.7 bits (143), Expect(3) = 7e-09
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Frame = +1
Query: 478 AALNGFKMGDKALTILHGTV-TEQPKPDQDIILQ*V*LHVAML*FALQGS------ISST 636
AALNG KMGDK LT+ TV + Q K +QD IL H+A+ ALQ
Sbjct: 6297 AALNGLKMGDKTLTVRRATVGSGQAKSEQDNILAQAQQHIAIQKIALQAGGLNLPGAGMA 6356
Query: 637 FLLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
F I P KV+CL +++I ELRDDE +++
Sbjct: 6357 FTAIAET-PTKVLCLTEVINIDELRDDEAYEE 6387
Score = 25.4 bits (54), Expect(3) = 7e-09
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 722 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
+ +IL+DMR+E KFG + VV P+ + G +F
Sbjct: 6385 YEEILEDMRDEGGKFGALVHVVIPRPSPNGDLIPGVGKVF 6424
Score = 21.2 bits (43), Expect(3) = 7e-09
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 416 GQELGTTFCV*QDPGV 463
G G FCV QDP V
Sbjct: 6276 GNSKGYGFCVYQDPAV 6291
>ref|XP_001767993.1| predicted protein [Physcomitrella patens]
gi|162680835|gb|EDQ67268.1| predicted protein
[Physcomitrella patens]
Length = 499
Score = 49.7 bits (117), Expect(2) = 8e-09
Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Frame = +1
Query: 478 AALNGFKMGDKALTILHGTVT---EQPKPDQ-DIILQ*V*LHVAML*FALQGSISSTFLL 645
AALNG KMGD+ LT+ + QPKPDQ +II+Q A ALQ + T
Sbjct: 345 AALNGLKMGDRTLTVRRASARLRFGQPKPDQSNIIVQ------AQQQIALQVAAPET--- 395
Query: 646 IVHANPAKVVCLI*IVSIVELRDDEVFQD 732
KV+CL +VSIV+L+DD F +
Sbjct: 396 -----ATKVICLSQVVSIVDLKDDVEFDE 419
Score = 37.4 bits (85), Expect(2) = 8e-09
Identities = 16/42 (38%), Positives = 29/42 (69%)
Frame = +2
Query: 716 MKFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
++F +I++DM+EEC K+G++ VV P+ + ED G++F
Sbjct: 415 VEFDEIVEDMKEECGKYGSLLNVVIPRPSYDEEDVPGIGMVF 456
>ref|XP_006467824.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
[Citrus sinensis]
Length = 522
Score = 50.4 bits (119), Expect(3) = 8e-09
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Frame = +1
Query: 478 AALNGFKMGDKALTILHGTVTE-QPKPDQDIILQ*V*LHVAML*FALQGSISSTF---LL 645
AALNG KMGDK LT+ T + Q K +Q+ IL H+A+ ALQ S +T +
Sbjct: 354 AALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMS 413
Query: 646 IVHANPAKVVCLI*IVSIVELRDDEVFQD 732
+ AKV+CL ++ L DDE +++
Sbjct: 414 LFGETLAKVLCLTEAITADALADDEEYEE 442
Score = 34.7 bits (78), Expect(3) = 8e-09
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 719 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
++ +IL+DMREEC K+GT+ VV P Q + G +F
Sbjct: 439 EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 479
Score = 21.2 bits (43), Expect(3) = 8e-09
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 416 GQELGTTFCV*QDPGV 463
G G FCV QDP V
Sbjct: 333 GNSKGYGFCVYQDPAV 348
>ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 238
Score = 59.7 bits (143), Expect(3) = 8e-09
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Frame = +1
Query: 478 AALNGFKMGDKALTILHGTV-TEQPKPDQDIILQ*V*LHVAML*FALQGS------ISST 636
AALNG KMGDK LT+ TV + Q K +QD IL H+A+ ALQ
Sbjct: 68 AALNGLKMGDKTLTVRRATVGSGQAKSEQDNILAQAQQHIAIQKIALQAGGLNLPGAGMA 127
Query: 637 FLLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
F I P KV+CL +++I ELRDDE +++
Sbjct: 128 FTAIAET-PTKVLCLTEVINIDELRDDEAYEE 158
Score = 25.4 bits (54), Expect(3) = 8e-09
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 722 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
+ +IL+DMR+E KFG + VV P+ + G +F
Sbjct: 156 YEEILEDMRDEGGKFGALVHVVIPRPSPNGDLIPGVGKVF 195
Score = 21.2 bits (43), Expect(3) = 8e-09
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 416 GQELGTTFCV*QDPGV 463
G G FCV QDP V
Sbjct: 47 GNSKGYGFCVYQDPAV 62
>ref|XP_006449309.1| hypothetical protein CICLE_v10014912mg [Citrus clementina]
gi|557551920|gb|ESR62549.1| hypothetical protein
CICLE_v10014912mg [Citrus clementina]
Length = 521
Score = 54.3 bits (129), Expect(2) = 1e-08
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +1
Query: 478 AALNGFKMGDKALTILHGTVTEQPKPDQDIILQ*V*LHVAML*FALQGSISSTF---LLI 648
AALNG KMGDK LT+ T + Q K +Q+ IL H+A+ ALQ S +T + +
Sbjct: 354 AALNGLKMGDKTLTVRRATASGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSL 413
Query: 649 VHANPAKVVCLI*IVSIVELRDDEVFQD 732
AKV+CL ++ L DDE +++
Sbjct: 414 FGETLAKVLCLTEAITADALADDEEYEE 441
Score = 32.3 bits (72), Expect(2) = 1e-08
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 719 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
++ +IL+DMREEC K+GT+ VV P + G +F
Sbjct: 438 EYEEILEDMREECGKYGTLVNVVIPRPDPNGGETPGVGKVF 478
>ref|XP_003605459.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355506514|gb|AES87656.1| Splicing factor U2af large
subunit B [Medicago truncatula]
Length = 634
Score = 52.8 bits (125), Expect(2) = 1e-08
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +1
Query: 430 YYFLCVTRSRCL*TSLAALNGFKMGDKALTILHGTV-TEQPKPDQDIILQ*V*LHVAML* 606
Y L VT C AALNG KMGDK LT+ T QPKP+Q+ IL +A+
Sbjct: 468 YADLAVTDIAC-----AALNGIKMGDKTLTVRRANQGTTQPKPEQESILMHAQQQIALQK 522
Query: 607 FALQGSISSTFLLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
Q ++ +T KVVCL V+ EL++DE F++
Sbjct: 523 LIFQPALVAT----------KVVCLTNAVAPEELKEDEDFEE 554
Score = 33.5 bits (75), Expect(2) = 1e-08
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 722 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
F +I+DDMR+EC KFG++ VV P + + G +F
Sbjct: 552 FEEIIDDMRQECSKFGSLVNVVIPRPQPDGDLSGGVGKVF 591
>ref|XP_002305148.2| hypothetical protein POPTR_0004s04100g [Populus trichocarpa]
gi|550340286|gb|EEE85659.2| hypothetical protein
POPTR_0004s04100g [Populus trichocarpa]
Length = 545
Score = 47.8 bits (112), Expect(2) = 1e-08
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Frame = +1
Query: 478 AALNGFKMGDKALTILHGTVT-EQPKPDQDIILQ*V*LHVAML*FALQGSISS-----TF 639
AALNG KMGDK LT+ T + Q K +Q+ IL H+A+ ALQ + +
Sbjct: 375 AALNGLKMGDKTLTVRRATESGGQSKSEQENILAQAQQHIAIQKMALQAGVMNLPGVGIP 434
Query: 640 LLIVHANPAKVVCLI*IVSIVELRDDEVFQD 732
L P+KV+CL +++ L DDE +++
Sbjct: 435 LAESAYTPSKVLCLTEAITMEVLADDEEYEE 465
Score = 38.5 bits (88), Expect(2) = 1e-08
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 719 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 841
++ +IL+DMREEC KFGT+ VV P+Q E G +F
Sbjct: 462 EYEEILEDMREECCKFGTLINVVIPRPSQNEEKMPGAGKVF 502