BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00004769
         (2494 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858609.1| hypothetical protein AMTR_s00071p00202370 [A...   363   2e-97
ref|XP_003285236.1| hypothetical protein DICPUDRAFT_86618 [Dicty...   171   2e-39
ref|XP_641568.1| SAP DNA-binding domain-containing protein [Dict...   156   5e-35
ref|XP_004357361.1| SAP DNA-binding domain-containing protein [D...   153   3e-34
gb|EFA77474.1| SAP DNA-binding domain-containing protein [Polysp...   152   5e-34
ref|XP_004353761.1| RNA recognition motif domain containing prot...   152   9e-34
ref|XP_005825174.1| hypothetical protein GUITHDRAFT_77389, parti...   104   2e-19
ref|XP_001638999.1| predicted protein [Nematostella vectensis] g...   100   3e-18
ref|NP_001084988.1| ribonucleoprotein, PTB-binding 1 [Xenopus la...    97   3e-17
ref|XP_003387203.1| PREDICTED: ribonucleoprotein PTB-binding 1-l...    97   4e-17
ref|XP_004994149.1| hypothetical protein PTSG_12218 [Salpingoeca...    95   2e-16
ref|NP_001121520.1| ribonucleoprotein, PTB-binding 1 [Xenopus (S...    93   6e-16
ref|XP_005846462.1| hypothetical protein CHLNCDRAFT_58266 [Chlor...    92   1e-15
ref|XP_006875146.1| PREDICTED: ribonucleoprotein PTB-binding 1 [...    92   1e-15
ref|XP_005902971.1| PREDICTED: ribonucleoprotein PTB-binding 1 i...    92   1e-15
ref|XP_005902970.1| PREDICTED: ribonucleoprotein PTB-binding 1 i...    92   1e-15
ref|XP_006206335.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleopr...    91   2e-15
ref|XP_005208761.1| PREDICTED: ribonucleoprotein PTB-binding 1 i...    91   2e-15
ref|XP_005208760.1| PREDICTED: ribonucleoprotein PTB-binding 1 i...    91   2e-15
ref|XP_002834447.2| PREDICTED: LOW QUALITY PROTEIN: ribonucleopr...    91   2e-15

>ref|XP_006858609.1| hypothetical protein AMTR_s00071p00202370 [Amborella trichopoda]
            gi|548862718|gb|ERN20076.1| hypothetical protein
            AMTR_s00071p00202370 [Amborella trichopoda]
          Length = 986

 Score =  363 bits (932), Expect = 2e-97
 Identities = 214/463 (46%), Positives = 279/463 (60%), Gaps = 13/463 (2%)
 Frame = +2

Query: 128  DVDAKEGEGHPVEDEKSTVVENGSNGV-CGQENKEGKDEEKSS--VLDKKDTAKEDDGMP 298
            D++ + GEG  V        E G +    G+E  E  +EE  +  V+ +     E++   
Sbjct: 200  DINEENGEGDDVGLGVKEAPEKGDDEKEIGKETDENLNEESDNRGVVKEDGARTEEEEQF 259

Query: 299  PEADGVSIPSHWHEKSGLRIKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFN 478
            PE   V I SHW  K  +R+ + GGS  EEEL+PLF++ G+VSSI F+NE++D  V+RF+
Sbjct: 260  PEVKTVEILSHWLPKPCVRVTITGGSATEEELLPLFTEHGKVSSIAFENEKRDATVVRFD 319

Query: 479  STVSEGEGFLEQVKEKLQNTQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHG 658
            S   + +     V+EKL NTQ G RTLL+E F+++SLLF+GNLTPDIDD++LR MFE HG
Sbjct: 320  SAPGDNQ-LAATVQEKLHNTQLGVRTLLVEAFRADSLLFVGNLTPDIDDSSLRTMFEPHG 378

Query: 659  HIERAFVLFNAAGRSKCYGFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKVADMF 838
             +ERAFVL NAAG+SK YGF+EY LKSQA AAK+ MG ++MDGRVLRVEWSDC+ + DMF
Sbjct: 379  KVERAFVLRNAAGQSKGYGFIEYSLKSQAIAAKTTMGVVNMDGRVLRVEWSDCKNIEDMF 438

Query: 839  SSVLFVDRLPKDDLNVEGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKA 1018
            S+VLFVDR+ K   N E  +R+LF QYGKV+DC L +G N   RG            DKA
Sbjct: 439  STVLFVDRISKHMPNPELALRSLFGQYGKVKDCFLPIGINGNIRGFGFIDFFHSACADKA 498

Query: 1019 HEMLDGYCFRGHTIRVSFANPAKSPQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRG 1198
            H  LDG+   G  IRVSFANP+KS QSYK R GN   +  F  M RGA  GM  A+   G
Sbjct: 499  HIALDGHELGGLNIRVSFANPSKSAQSYKQRLGNQGPAQAFGGMGRGAIPGMTAASRGNG 558

Query: 1199 QMPMQVVGQRYRAPARTGM------MQYGRGSHVGKPNNQGHA--SASGMLVTNTGPTGM 1354
             MP  +  Q   A AR+ +      M Y RG+ +G    + +     +G+L       G+
Sbjct: 559  YMPF-MANQFVGAVARSSVLGVGAGMAYNRGTPMGPRILEQNVMDRGNGILSAGAPMAGV 617

Query: 1355 MGRPP-MNMLSRRANATG-GNMPPLHPPSAQGHGPPNPPAIAQ 1477
            MGRPP M  +S+R   +G GN+        QG  P N  A AQ
Sbjct: 618  MGRPPFMGNISQRQGMSGLGNLASAQHFINQGTYPSNLAAAAQ 660


>ref|XP_003285236.1| hypothetical protein DICPUDRAFT_86618 [Dictyostelium purpureum]
            gi|325084778|gb|EGC38198.1| hypothetical protein
            DICPUDRAFT_86618 [Dictyostelium purpureum]
          Length = 1002

 Score =  171 bits (432), Expect = 2e-39
 Identities = 134/460 (29%), Positives = 225/460 (48%), Gaps = 28/460 (6%)
 Frame = +2

Query: 164  EDEKSTVVENGSNGVCGQENKEGKDEEKSSVLDKKDTAKEDDGMPPEADGVSIPSHWHEK 343
            ED  S  V+        QE ++  +E+ SS   K+D+  ++       D   +   + +K
Sbjct: 278  EDLNSADVDADIVNKAIQEAEKAVNEKMSSEKKKEDSLDKNKIQQAITD---MEESFKKK 334

Query: 344  SGLRIKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKE 523
              +R+  +  S  E+EL    ++ G+V +  +++ +KD+A+++  +         +Q KE
Sbjct: 335  PSIRVAGLNDSLTEKELKDALAEHGKVHTFTYESPKKDSAIVQMEN--------YQQAKE 386

Query: 524  KLQNTQFGERTLLIEPFQ-SESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AG 697
            KL  T+    TL I     ++SLLF+GNL  +I    L+++FEK+G ++R  ++ +  +G
Sbjct: 387  KLSGTKLKNCTLTITEIPLADSLLFVGNLGFEITKEQLKKIFEKYGDVDRIIIMKSKRSG 446

Query: 698  RSKCYGFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSD-CRKVADMFSSVLFVDRLPKD 874
             +K Y F++Y  K QA +AK+++G+ S + R +RV+W++ C  +  + S  +FVDRLP+ 
Sbjct: 447  ENKGYAFIDYRTKLQANSAKTSLGSFSFNRRTIRVDWAENCNSLESLHSKTIFVDRLPRS 506

Query: 875  DLNVEGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGH 1054
              ++   ++ LFS +GK++DC++        RG            +KA  +++    RG+
Sbjct: 507  FADIP-ILKKLFSPFGKIKDCNVVPNQYGQQRGFAFIDYTTVDEAEKAQRLMNDKDLRGY 565

Query: 1055 TIRVSFANPAKS------PQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQV 1216
             IRV+FANPAK+      PQ+         QSN  +   RG  S   GA P RG      
Sbjct: 566  KIRVNFANPAKAGHILIKPQAQSRNEHKGVQSNRGSAPTRGGISSRGGA-PGRGG----- 619

Query: 1217 VGQRYRAPARTGMMQYGRG---SHVGKP----NNQGHASASGMLVTNTGPTGMM----GR 1363
            +  R   P R G    GRG    H G P    ++  H +++     N  P  M+    G 
Sbjct: 620  ISGRGGLPGRGGAS--GRGGLHGHHGVPPPHHHHPHHPTSAYGGYPNIPPISMVPNHPGF 677

Query: 1364 PPMNMLSRRANATG---GNMPP-----LHPPSAQGHGPPN 1459
            PP +   +R+   G    N PP     L PP+A   G PN
Sbjct: 678  PPAHYNDQRSGGFGVGASNYPPHMNHSLVPPNANNRGGPN 717


>ref|XP_641568.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
            AX4] gi|60469605|gb|EAL67594.1| SAP DNA-binding
            domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1009

 Score =  156 bits (394), Expect = 5e-35
 Identities = 117/383 (30%), Positives = 190/383 (49%), Gaps = 20/383 (5%)
 Frame = +2

Query: 215  QENKEGKDEEKSSVLDKKDTAKEDDGMPPEADGVSIPSHWHEKSGLRIKVIGGSTCEEEL 394
            QE ++   E+ SS   ++D+    D    +     +   + +   ++I  +  S  E+EL
Sbjct: 287  QEAEKAVTEKMSSEKKREDSL---DKTKIQQSIAEMEGSFKKIPSIKITGLNDSLTEKEL 343

Query: 395  MPLFSDFGQVSSIVFDNERKDTAVIRF-NSTVSEGEGFLEQVKEKLQNTQFGERTLLIEP 571
                ++ G+V +I ++  +KD A+++  N T++         KEKL N++    TL I  
Sbjct: 344  EEALNEVGKVHTITYEGSKKDFAIVQMENHTIA---------KEKLNNSKLKNCTLSITD 394

Query: 572  FQ-SESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCYGFVEYGLKSQA 745
               ++SLLF+GNL  D+    L++MFEKHG I+R  ++ N   G +K Y F++Y  K QA
Sbjct: 395  IPLADSLLFVGNLGNDVGKEQLKKMFEKHGTIDRIILIKNRRTGENKGYAFIDYRTKLQA 454

Query: 746  YAAKSAMGNISMDGRVLRVEWSD-CRKVADMFSSVLFVDRLPKDDLNVEGNIRTLFSQYG 922
              AKS++G+I  + R LRV+W++ C  +  M S  +FVDRLP+   +V   +R +FS +G
Sbjct: 455  STAKSSLGSIVFNRRTLRVDWAENCNTMESMHSKTIFVDRLPRSFADVP-ILRKVFSPFG 513

Query: 923  KVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAK----- 1087
            K++DC++        RG            +KA  M++    +G+ IRV+FANP+K     
Sbjct: 514  KIKDCNVVPNYYGQPRGFAFIDYNNVEDAEKAQRMMNEKDLKGYKIRVNFANPSKPGHSL 573

Query: 1088 -SPQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQ-MPMQVVGQRYRAPA------ 1243
              P S +    + S  ++     RG   G MG  P   Q   +  VG  +R         
Sbjct: 574  VKPPSQQSGRSHESVPSSSPFRGRGRGRGSMGVPPPNSQHFGIGSVGGGFRGGRGVGGYP 633

Query: 1244 --RTGMMQYGRGSH-VGKPNNQG 1303
               +G+ Q GRG   VG  N  G
Sbjct: 634  GDHSGIYQGGRGGRGVGGVNGSG 656


>ref|XP_004357361.1| SAP DNA-binding domain-containing protein [Dictyostelium
            fasciculatum] gi|328870525|gb|EGG18899.1| SAP DNA-binding
            domain-containing protein [Dictyostelium fasciculatum]
          Length = 927

 Score =  153 bits (387), Expect = 3e-34
 Identities = 139/491 (28%), Positives = 224/491 (45%), Gaps = 11/491 (2%)
 Frame = +2

Query: 26   NEGEEIEKKEGVPVTENGSAED----LVIPHMDYQENGDVDAKEGEGHPVEDEKSTVVEN 193
            NE +  E++E    T     E+    L     DY +N +    E +   VE+    VV++
Sbjct: 163  NEQDHQEEEEEEDSTNGTKDEEEFMNLQGEEYDYSDNEENYQDEVDTKRVEEAIQDVVKS 222

Query: 194  GSNGVCGQENKEGKDEEKSSVLDKKDTAKEDDGMPPEADGVSIPSHWHEKSGLRIKVIGG 373
                   ++ KE   +EK S + K+   K+D     +     +   + + + L+I  +  
Sbjct: 223  -----VAEKEKENLTKEKESPMTKEK--KDDIKNKVQLAIQDMEESFKKPAILKITGLTE 275

Query: 374  STCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQNTQFGER 553
               E++L    S  G+V  + FD  ++D AV+     + E +   + VK+KL  T+    
Sbjct: 276  HIIEKDLKEFLSAHGKVLDLKFDGIKRDIAVV-----IMENQQTSQLVKDKLNGTKLKNC 330

Query: 554  TL-LIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCYGFVEY 727
            TL +I+    ++LLF+GNL P++  ++LR+MFEK+G  +R  ++ N   G SK YGFV+Y
Sbjct: 331  TLNIIDMPIQDTLLFVGNLGPEMTKDSLRKMFEKYGEPDRVILMKNRRTGESKGYGFVDY 390

Query: 728  GLKSQAYAAKSAMGNISMDGRVLRVEWSD-CRKVADMFSSVLFVDRLPKDDLNVEGNIRT 904
              + QA AAK+++G+ ++ GRVLRV+W++ C  +  M S  +FVD+L K  ++V   +  
Sbjct: 391  RTRLQANAAKASLGSTTVSGRVLRVDWAETCSTLESMHSKTIFVDKLQKQYVDV-AILTK 449

Query: 905  LFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPA 1084
            LFS +GK+++C + L      +G            +KA + ++    + + IRVSF NP+
Sbjct: 450  LFSPFGKIKECSIPLAGQP--KGFAFIDYESVEDAEKAQKTMNDKELQEYKIRVSFGNPS 507

Query: 1085 KSPQSYKLRFGNSSQSNNFANMN----RGAHSGMMGANPMRGQMPMQVVGQRYRAPARTG 1252
            K P     R G         N N    RG  +   G    RG               R G
Sbjct: 508  K-PGFAMTRGGGGGGERTPPNANSPHGRGERNDRGGGRGGRGGF----------HGGRGG 556

Query: 1253 MMQYGRGSHVGKPNNQGHASASGMLVTNTGPTGMMGRPPMNMLSRRANATGGNMPPLHPP 1432
            M     G   G    +G     G +    GP G  G P    + R     GG+ P     
Sbjct: 557  MEHNNGGGRGGFRGGRGGGGDRGGMDHGGGPRG--GGPGRGGMDR--GGRGGHQPHF--- 609

Query: 1433 SAQGHGPPNPP 1465
               G+ PP PP
Sbjct: 610  ---GNFPPPPP 617


>gb|EFA77474.1| SAP DNA-binding domain-containing protein [Polysphondylium pallidum
            PN500]
          Length = 836

 Score =  152 bits (385), Expect = 5e-34
 Identities = 112/380 (29%), Positives = 191/380 (50%), Gaps = 32/380 (8%)
 Frame = +2

Query: 44   EKKEGVPVTENGSAEDLVIPHMDYQENGDVDAKE--------GEGHPVEDEKSTVVENGS 199
            +++    V  N + ED      D + NG+ D ++        GEG+  +D++  +  N  
Sbjct: 182  KQESAAAVASNNNNEDA--EEEDDENNGNADQQQQQQQQNYNGEGNEEQDDEDLIDNNNK 239

Query: 200  NGVCGQENKEGKDEEKSSVLDKKD---TAKEDDGMPPEADGVSIPSHWHEKSGLR----- 355
                  +N+E   +  +  +D+ +     KE +    E    +      EK+ ++     
Sbjct: 240  EQFDYSDNEESYPDNINDEVDQNEIEKVIKEVEESVAEKVNKTADKKAEEKAKVQQSLAE 299

Query: 356  ----------IKVIG--GSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGE 499
                      +K+ G   +  +++L    S  G+V +I FD  ++D AV+       E +
Sbjct: 300  MEEAFKKSPVLKIAGLTEAIIDKDLKEYLSAHGKVMNITFDGPKRDIAVV-----CMENQ 354

Query: 500  GFLEQVKEKLQNTQFGERTLLIEPFQ-SESLLFIGNLTPDIDDNALRQMFEKHGHIERAF 676
                 VKEKL  T+    TL I     S++LLFIGNL P++    LR+MFEK+G ++RA 
Sbjct: 355  QAHNSVKEKLNGTKLKNCTLNISEMPISDTLLFIGNLGPEVGREQLRKMFEKYGEVDRAI 414

Query: 677  VLFNA-AGRSKCYGFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSD-CRKVADMFSSVL 850
            V+ N  +G SK YGF+++  K QA AAKS++G+   +GR LRV+W+D C  +  M S  +
Sbjct: 415  VMKNKRSGESKGYGFIDFRTKLQANAAKSSLGSTKYNGRNLRVDWADSCSTLELMHSKTI 474

Query: 851  FVDRLPKDDLNVEGNIRTLFSQYGKVRDCHLGLGDN-NMFRGXXXXXXXXXXXXDKAHEM 1027
            F+DRL ++ ++    +R LF+++GK+RDC++    N    RG            +KA + 
Sbjct: 475  FIDRLLRNFVD-RTILRKLFTKFGKIRDCNVFPNPNTGQPRGFAFIDYELVEDAEKAQKA 533

Query: 1028 LDGYCFRGHTIRVSFANPAK 1087
            ++    +G+ IRVSF NP++
Sbjct: 534  MNDRDIQGYPIRVSFGNPSR 553


>ref|XP_004353761.1| RNA recognition motif domain containing protein [Acanthamoeba
            castellanii str. Neff] gi|440803326|gb|ELR24233.1| RNA
            recognition motif domain containing protein [Acanthamoeba
            castellanii str. Neff]
          Length = 647

 Score =  152 bits (383), Expect = 9e-34
 Identities = 137/487 (28%), Positives = 222/487 (45%), Gaps = 25/487 (5%)
 Frame = +2

Query: 77   GSAEDLVIPHMDYQENGDVDAKEGEG-----HPVEDEKSTVVENGSNGVCGQ-------- 217
            GSA+D      D +++G V  ++GE       P+         N + G+           
Sbjct: 58   GSADDT-----DDEDDGGVSVQQGETTLSSPSPLSTAAVAAEANRAEGIAPTTEQTEQAR 112

Query: 218  -ENKEGKDEEKSSVLDKKDTAKEDDGMPPEADGVSIPSHWHEKSGLRIKVIGGSTCEEEL 394
             + +  + E  +  LD+ +   ++     E    ++ + ++    L++  +G      +L
Sbjct: 113  PQQQRRRTESDARPLDRAELGADEK----ERALAAMLASFNASHALQVTGVGSDITTADL 168

Query: 395  MPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEG--FLEQ-VKEKLQNTQFGERTLLI 565
             P+F++FG+V  +V +  R+D  V+R     ++     F E  ++ K +  Q  + TL  
Sbjct: 169  EPVFAEFGKVHGLVVEPSRRDVVVVRMPHDAAQKAKAHFAEHPLRVKDKELQASDATL-- 226

Query: 566  EPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAA-GRSKCYGFVEYGLKSQ 742
                 E  LF+GNL  D++   LR +F+ HG  ER  V+ + A GR K YGFVE   K+Q
Sbjct: 227  -----ECFLFVGNLNEDVEPEHLRSLFQAHGEPERTIVMRSTATGRKKGYGFVEMRTKAQ 281

Query: 743  AYAAKSAMGNISMDGRVLRVEWSDCRKVADMFSSVLFVDRLPKDDLNVEGNIRTLFSQYG 922
            A AAK+ +G  +  GR LR++W    K+ ++ S VLFVD+LP +  +  G +R LF ++G
Sbjct: 282  AGAAKALLGATNFHGRSLRIDWCRLGKLEELHSPVLFVDKLPPNFTDYNG-LRQLFLKHG 340

Query: 923  KVRDCHLGLGD-NNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAKSPQS 1099
             V++ ++ +   N++ RG            +KA + L    FRG  IR+SF NPAK+   
Sbjct: 341  TVKNINVPVNPMNSIPRGFAFVTLSSAEEAEKARDALHDTEFRGSHIRISFGNPAKA--- 397

Query: 1100 YKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQVVGQR--YRAPARTGMMQYGRG 1273
              +  G  S   N    +RG      G  P    +P    G R  Y  P R G   +GRG
Sbjct: 398  -DIATGPISPRFNPPAAHRGQPYARGGLYP--PPLPYHGRGGRGGYFPPMRNG---WGRG 451

Query: 1274 SHVGKPNNQGHASASGMLVTNTGPTGMMGRPPMNMLSRRANATGGNMPPLHPPSAQ---- 1441
                 P       A G L       G++G P  +      +    ++PP  PPSA+    
Sbjct: 452  DFSFGP-------APGFL-------GLLGGPYSSYRPTGPSYQHSHIPPGGPPSAKRPNL 497

Query: 1442 GHGPPNP 1462
            G+ PP P
Sbjct: 498  GYQPPQP 504


>ref|XP_005825174.1| hypothetical protein GUITHDRAFT_77389, partial [Guillardia theta
            CCMP2712] gi|428169258|gb|EKX38194.1| hypothetical
            protein GUITHDRAFT_77389, partial [Guillardia theta
            CCMP2712]
          Length = 169

 Score =  104 bits (259), Expect = 2e-19
 Identities = 57/159 (35%), Positives = 89/159 (55%)
 Frame = +2

Query: 590  LFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAAGRSKCYGFVEYGLKSQAYAAKSAMG 769
            +F+GN+ PD  +  + ++F+K G  +R+ V+ +A G S  YGF+E+   SQA  A   M 
Sbjct: 12   VFVGNIHPDTKEEEVIELFKKFGKPDRSIVMRSAEGISLGYGFLEFSDASQARKAVEGMN 71

Query: 770  NISMDGRVLRVEWSDCRKVADMFSSVLFVDRLPKDDLNVEGNIRTLFSQYGKVRDCHLGL 949
             I    R LRV+++DCR  +  FS ++F+D+LP+  +++E  +R++FS  G + DCHL  
Sbjct: 72   LIVYKERQLRVDFADCRSKSSQFSPIVFIDQLPRTFVDLE-KLRSIFSPKGAMVDCHLAK 130

Query: 950  GDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRV 1066
            G  N+ RG              A   L+GY   G  IRV
Sbjct: 131  GPGNVTRGFAFVEYETHDSAYSAFRELNGYKLEGQPIRV 169


>ref|XP_001638999.1| predicted protein [Nematostella vectensis]
            gi|156226124|gb|EDO46936.1| predicted protein
            [Nematostella vectensis]
          Length = 301

 Score =  100 bits (249), Expect = 3e-18
 Identities = 76/241 (31%), Positives = 116/241 (48%), Gaps = 11/241 (4%)
 Frame = +2

Query: 410  DFGQVSSIVFDN-ERKDTAVIRFNSTVSEGEGFLEQVKEK---LQNTQFGERTLLIEPFQ 577
            D   + S +F   + KD  +    +T +   G +EQ +     L   ++ ++TL + P  
Sbjct: 51   DLQDLKSKIFQGYDVKDLVIGHVKNTATVVFGGIEQARSVISFLNTCKYHDKTLNVSPAP 110

Query: 578  SESLLFIGNLTPDIDDNALRQMFEKHGHIERAF-VLFNAAGRSKCYGFVEYGLKSQAYAA 754
             ESLLF+GNL  +  +     +   +G+IER F V     G SK YGFVEY  +  A  A
Sbjct: 111  PESLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQA 170

Query: 755  KSAMGNIS---MDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDLNVEGNIRTLFSQY 919
            K  + N +   + GR+LRV +++   +  AD+ S  LFVDRLP+D  N  G I+ LFSQ 
Sbjct: 171  KQQLLNTASKYIGGRILRVAFAESNLLTYADVHSRTLFVDRLPRDFKN-GGLIKELFSQT 229

Query: 920  GKVRDCHLGLGD-NNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAKSPQ 1096
            G V    + +   N   RG            +K     +G    G  IRV++ +P ++  
Sbjct: 230  GNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRVAYGSPGRTGA 289

Query: 1097 S 1099
            S
Sbjct: 290  S 290


>ref|NP_001084988.1| ribonucleoprotein, PTB-binding 1 [Xenopus laevis]
            gi|47682299|gb|AAH70699.1| MGC83237 protein [Xenopus
            laevis]
          Length = 694

 Score = 97.4 bits (241), Expect = 3e-17
 Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 3/251 (1%)
 Frame = +2

Query: 356  IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 535
            IK + G    +E+  L  D+       F ++ K TA +    T+  GE   E    +   
Sbjct: 69   IKGLPGDISNQEVHDLLGDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AESAIRRFHQ 121

Query: 536  TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAA-GRSKCY 712
            T   +R + ++   +++LL I NL+P         +    G++ER F+++++  GR K Y
Sbjct: 122  THIRDREISVQLQPTDALLCIANLSPTYTQQQFEDLVRPFGNLERCFLIYSSTTGRPKGY 181

Query: 713  GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKVAD--MFSSVLFVDRLPKDDLNV 886
            GFVEY  K  A  AKS +    +  R L V WSD  ++    + S  L V++L + DL  
Sbjct: 182  GFVEYMKKDSASRAKSDLLGRQLGSRTLYVHWSDVNQLTYELLHSHCLLVEQLQECDL-- 239

Query: 887  EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRV 1066
             G++R  FS+      C L  G +N+++G            +   + +DG    G  +RV
Sbjct: 240  -GDLREAFSKISAPSFCQLAYGQDNLYKGFAVVEYESDTVTEMVQQQMDGSSVAGSRVRV 298

Query: 1067 SFANPAKSPQS 1099
            SF  P  + +S
Sbjct: 299  SFCAPGPAGRS 309


>ref|XP_003387203.1| PREDICTED: ribonucleoprotein PTB-binding 1-like [Amphimedon
            queenslandica]
          Length = 454

 Score = 96.7 bits (239), Expect = 4e-17
 Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
 Frame = +2

Query: 581  ESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAA-GRSKCYGFVEYGLKSQAYAAK 757
            +SLLFIGN+        LR++F   G + R  ++++ + G SK YGFVE+  + +A  AK
Sbjct: 112  DSLLFIGNIPLWFKKENLRELFSPLGTVLRCLIIYSMSRGLSKGYGFVEFSTRDEALLAK 171

Query: 758  SAMGNISMDGRVLRVEWSD--CRKVADMFSSVLFVDRLPKDDLNVEGNIRTLFSQYGKVR 931
              M   ++ GR LRV+++D   +  AD+ S  LFVDRLPK   N +  ++ +F  YG + 
Sbjct: 172  HIMATKAIGGRHLRVDFADNGMQTTADLHSKTLFVDRLPKTFKN-DLVLQKMFEVYGTIN 230

Query: 932  DCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAK 1087
             C + +  N   R             ++A   L+GY F+G  IRVS+  P +
Sbjct: 231  FCQVAIAPNGCPRCFAFIDFNSSFSAEEAQFNLNGYSFQGQEIRVSYGMPCR 282


>ref|XP_004994149.1| hypothetical protein PTSG_12218 [Salpingoeca rosetta]
            gi|326427548|gb|EGD73118.1| hypothetical protein
            PTSG_12218 [Salpingoeca rosetta]
          Length = 758

 Score = 94.7 bits (234), Expect = 2e-16
 Identities = 83/295 (28%), Positives = 136/295 (46%), Gaps = 6/295 (2%)
 Frame = +2

Query: 515  VKEKLQNTQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAA 694
            ++ +++   F +R +   P +++ LLF+GNL+  +    L ++    G I RAFV+ + A
Sbjct: 1    MRSRIEGAWFNDRHITTTPARTDGLLFLGNLSKRMTPARLIELGSPSGQICRAFVMVDEA 60

Query: 695  G-RSKCYGFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSD--CRKVADMFSSVLFVDRL 865
                + YGF+E+  K+ A  A++ + +  +D R +RV+        ++   S  LF+DRL
Sbjct: 61   TLEGQGYGFLEFVNKATAVKARADLASRVVDDRPIRVDLMKPVDNDISHFRSRTLFIDRL 120

Query: 866  PKDDLNVEGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCF 1045
            PK   NV   +R +F   GKV  C L +  N + RG              A  + +G   
Sbjct: 121  PKTLTNV-NKLRAMFESAGKVDFCQLVM-SNGVCRGFAFVDMASYHDALSARRLFNGAVV 178

Query: 1046 RGHTIRVSFANPAKSPQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQVVGQ 1225
             G TIRVSF +P K+  S  +  G    +   A   R  H       P + ++    V +
Sbjct: 179  EGATIRVSFGHPQKTGAS--IMHGKEEVAKAKARAERQLH-------PSKQRLAYPPVAR 229

Query: 1226 RYRAPARTGMMQYGRGSHVGKPNNQGHASASGMLVTNTG-PTGMMGRP--PMNML 1381
            R  AP      Q+ RG+ +  P    +   + + V+  G P GM   P  PM+ML
Sbjct: 230  R-SAPTH----QFPRGAALPPPPTASNRPVAQLQVSGNGLPHGMGNMPHHPMHML 279


>ref|NP_001121520.1| ribonucleoprotein, PTB-binding 1 [Xenopus (Silurana) tropicalis]
            gi|183986231|gb|AAI66376.1| LOC100158642 protein [Xenopus
            (Silurana) tropicalis]
          Length = 701

 Score = 92.8 bits (229), Expect = 6e-16
 Identities = 81/326 (24%), Positives = 136/326 (41%), Gaps = 3/326 (0%)
 Frame = +2

Query: 131  VDAKEGEGHPVEDEKSTVVENGSNGVCGQENKEGKDEEKSSVLDKKDTAKEDDGMPPEAD 310
            V A+ GEG PV      V   G           G +E+  S L+ ++     + M  E  
Sbjct: 7    VRARTGEGGPVP----VVGNRGWRTERDSAESVGSEEQMESRLEPQEIRNRVERMRREV- 61

Query: 311  GVSIPSHWHEKSGLRIKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVS 490
                      +  + IK + G    +E+  L  ++       F ++ K TA +    T+ 
Sbjct: 62   --------RNRRKILIKGLPGDITNQEVHDLLGEYEL--KYCFVDKYKGTAFV----TLL 107

Query: 491  EGEGFLEQVKEKLQNTQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIER 670
             GE   E    +   T   +R + ++   +++LL I NL P+        +    G++ER
Sbjct: 108  NGEQ-AESAIRRFHQTHIRDREISVQLQPTDALLCIANLPPNYTQQQFEDLVRPFGNLER 166

Query: 671  AFVLFNAA-GRSKCYGFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKVAD--MFS 841
             F+++++  GR K YGFVEY  K  A  AKS +    +  R L V WSD  ++    + S
Sbjct: 167  CFLVYSSTTGRPKGYGFVEYMKKDSASRAKSDLLGRQLGSRTLYVHWSDVNQLTYELLHS 226

Query: 842  SVLFVDRLPKDDLNVEGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAH 1021
              L V++L + D+   G++R  FS+      C L  G +  ++G            +   
Sbjct: 227  HCLLVEQLQECDI---GDLREAFSKISAPSFCQLAYGQDGQYKGFAVVEYESDTVTEMVQ 283

Query: 1022 EMLDGYCFRGHTIRVSFANPAKSPQS 1099
            + +D     G  +RVSF  P    +S
Sbjct: 284  QQMDESSVAGSRVRVSFCAPGPPGRS 309


>ref|XP_005846462.1| hypothetical protein CHLNCDRAFT_58266 [Chlorella variabilis]
            gi|307106113|gb|EFN54360.1| hypothetical protein
            CHLNCDRAFT_58266 [Chlorella variabilis]
          Length = 750

 Score = 92.0 bits (227), Expect = 1e-15
 Identities = 113/437 (25%), Positives = 171/437 (39%), Gaps = 53/437 (12%)
 Frame = +2

Query: 314  VSIPSHWHEKSGLRIKVIGGSTCEEELMPLFSDFGQ---VSSIVFDNERKD----TAVIR 472
            + +P  W  +  +RI  +  +  E EL  L    G    V S+VFD ++       A++R
Sbjct: 1    MDMPEEWRPRPMVRIWGLPAAATEAELAELLEGQGLEHGVRSVVFDPKQATQAGKVALVR 60

Query: 473  FN----------STVSEGEGFLEQVKEKL------QNTQFGERTLLIEPFQSESLLFIGN 604
            F+             +  E  + +V E+L      +  Q     L +E   +E  LF+ N
Sbjct: 61   FDPPAAPPLGEPGAAAAPEPDVGKVAERLIAALRARQPQLHGVKLNVEKTGAEVCLFLAN 120

Query: 605  LTPDID-DNALRQMFEKHGHIERAFVLFNAAGRSKCYGFVEYGLKSQAYAAKSAMGNIS- 778
            L  + + D  LR   E++G +ER FV+ N AG SK Y F E+ L + A A K A      
Sbjct: 121  LRGEAEEDGGLRATCEQYGAVERCFVVRNPAGDSKRYAFCEFTLPASAAACKEAWNRAGD 180

Query: 779  -----------------MDGRVLRVEWSDCRKVADMFSSVLFVDRLPKDDLNVEGNIRTL 907
                             +  ++ R E +  + VA +F++VL+VD +     N E  ++ +
Sbjct: 181  AQRPQAQRDASGAATKFVRVKLQRAEPAPVKSVAGLFATVLYVDNMSPSFTNHEA-LKKV 239

Query: 908  FSQYGKVRDCHLGLGDNN--MFRGXXXXXXXXXXXXDKAHEMLDGYCFRG-HTIRVSFAN 1078
            F +YG+V  C+L     N    RG            D A   LD     G   + +SF+N
Sbjct: 240  FGEYGEVTSCYLPRNPTNPSACRGFAFVHFKHSFAADAAFRALDETEQPGIGKLLISFSN 299

Query: 1079 PAKSPQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQVVGQRYRAPARTGMM 1258
            P K+ +                ++NR A     GA+            Q+ R P      
Sbjct: 300  PVKANE----------------HLNRTAGGAGAGAS------------QQQRQPRDQQQQ 331

Query: 1259 QYGRGSHVGKPNNQGHASASGMLVTNTGPTGMMGRPPMNMLSRRANATG------GNMP- 1417
            Q   G   G+   QG A  +G      G    +  PPM     RA  TG      G M  
Sbjct: 332  QQRMGGAGGRGGAQGGAMGAGR--AGGGAAAPVPSPPMG--GMRATGTGMGQAGMGGMAG 387

Query: 1418 -PLHPPSAQGHGPPNPP 1465
             P+  P+A    PP PP
Sbjct: 388  GPIILPAAAMMPPPPPP 404


>ref|XP_006875146.1| PREDICTED: ribonucleoprotein PTB-binding 1 [Chrysochloris asiatica]
          Length = 744

 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 108/435 (24%), Positives = 168/435 (38%), Gaps = 35/435 (8%)
 Frame = +2

Query: 356  IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 535
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 80   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISAFHQ 132

Query: 536  TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 712
            +Q  ER L ++   +++LL + NL P +      ++    G +ER F++++  +G SK Y
Sbjct: 133  SQLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERSGHSKGY 192

Query: 713  GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDLNV 886
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VD LP    +V
Sbjct: 193  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDHLPPGFSDV 252

Query: 887  EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRV 1066
            +  +R   S       C L  G +   +G            ++A +  DG    G  +RV
Sbjct: 253  DA-LRRALSAVHTPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQQADGLALGGSHLRV 311

Query: 1067 SFANPAK----------SPQSYKLRFG--------------NSSQS-------NNFANMN 1153
            SF  P            + Q+  L  G              N   S       N   + N
Sbjct: 312  SFCAPGPPGRSMLAALIAAQATALNRGKGLLPEPNILQLLNNLGPSASLQLLLNPLLHSN 371

Query: 1154 RGAHSGMMGANPMRGQMPMQVVGQRYRAPA-RTGMMQYGRGSHVGKPNNQGHASASGMLV 1330
             G   G++GA P    MP+        +PA  T ++Q            QG      +  
Sbjct: 372  AGGKQGLLGAPP---AMPL------LNSPALSTALLQLAL-------QTQGQKKPGILGD 415

Query: 1331 TNTGPTGMMGRPPMNMLSRRANATGGNMPPLHPPSAQGHGPPNPPAIAQTEGSKL*LPAA 1510
            +  GP    G  P N L    +A GG +PP  PP      P  PP +  +   +  +   
Sbjct: 416  SPLGPL-QPGAQPANPLLGELSAVGG-VPPELPPRRGKPPPLLPPLLGPSGSDREVMGLG 473

Query: 1511 VPANTTTDIPTSAAV 1555
             PA   T  P  +++
Sbjct: 474  PPATQLTPPPARSSL 488


>ref|XP_005902971.1| PREDICTED: ribonucleoprotein PTB-binding 1 isoform X2 [Bos mutus]
          Length = 716

 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 104/427 (24%), Positives = 164/427 (38%), Gaps = 32/427 (7%)
 Frame = +2

Query: 356  IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 535
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 63   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISAFHQ 115

Query: 536  TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 712
            ++  ER L ++   +++LL + NL P +      ++    G +ER F++++   G SK Y
Sbjct: 116  SRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGY 175

Query: 713  GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDLNV 886
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V
Sbjct: 176  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFSDV 235

Query: 887  EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRV 1066
            +  +R   S       C L  G +   +G            ++A +  DG    G  +RV
Sbjct: 236  DA-LRRALSAVHTPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQRADGLALGGSHLRV 294

Query: 1067 SFANPAKSPQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQVVGQRYR--AP 1240
            SF  P   P    L    ++Q+     +NRG           +G +P   + Q      P
Sbjct: 295  SFCAPG-PPGRSMLAALIAAQA---TALNRG-----------KGLLPEPNILQLLNNLGP 339

Query: 1241 ARTGMMQYGRGSHVGKPNNQGHASASGMLVTNTGPT------------------GMMGRP 1366
            + +  +      H G    QG   A   +    GP                   G++G  
Sbjct: 340  SASLQLLLNPLLHSGAGGKQGLLGAPPAVPLLNGPALSTALLQLALQTQSQKKPGILGDS 399

Query: 1367 PMNMLSRRAN---------ATGGNMPPLHPPSAQGHGPPNPPAIAQTEGSKL*LPAAVPA 1519
            P+  L   A          + GG +PP  PP      P  PP +  + G +  +    PA
Sbjct: 400  PLGTLQPGAQPANPLLGELSAGGGLPPELPPRRGKPPPLLPPLLGPSGGDREPMGLGPPA 459

Query: 1520 NTTTDIP 1540
               T  P
Sbjct: 460  PQLTPPP 466


>ref|XP_005902970.1| PREDICTED: ribonucleoprotein PTB-binding 1 isoform X1 [Bos mutus]
            gi|440899929|gb|ELR51170.1| Ribonucleoprotein PTB-binding
            1 [Bos mutus]
          Length = 758

 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 104/427 (24%), Positives = 164/427 (38%), Gaps = 32/427 (7%)
 Frame = +2

Query: 356  IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 535
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 80   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISAFHQ 132

Query: 536  TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 712
            ++  ER L ++   +++LL + NL P +      ++    G +ER F++++   G SK Y
Sbjct: 133  SRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGY 192

Query: 713  GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDLNV 886
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V
Sbjct: 193  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFSDV 252

Query: 887  EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRV 1066
            +  +R   S       C L  G +   +G            ++A +  DG    G  +RV
Sbjct: 253  DA-LRRALSAVHTPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQRADGLALGGSHLRV 311

Query: 1067 SFANPAKSPQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQVVGQRYR--AP 1240
            SF  P   P    L    ++Q+     +NRG           +G +P   + Q      P
Sbjct: 312  SFCAPG-PPGRSMLAALIAAQA---TALNRG-----------KGLLPEPNILQLLNNLGP 356

Query: 1241 ARTGMMQYGRGSHVGKPNNQGHASASGMLVTNTGPT------------------GMMGRP 1366
            + +  +      H G    QG   A   +    GP                   G++G  
Sbjct: 357  SASLQLLLNPLLHSGAGGKQGLLGAPPAVPLLNGPALSTALLQLALQTQSQKKPGILGDS 416

Query: 1367 PMNMLSRRAN---------ATGGNMPPLHPPSAQGHGPPNPPAIAQTEGSKL*LPAAVPA 1519
            P+  L   A          + GG +PP  PP      P  PP +  + G +  +    PA
Sbjct: 417  PLGTLQPGAQPANPLLGELSAGGGLPPELPPRRGKPPPLLPPLLGPSGGDREPMGLGPPA 476

Query: 1520 NTTTDIP 1540
               T  P
Sbjct: 477  PQLTPPP 483


>ref|XP_006206335.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoprotein PTB-binding 1
            [Vicugna pacos]
          Length = 722

 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 108/430 (25%), Positives = 167/430 (38%), Gaps = 35/430 (8%)
 Frame = +2

Query: 356  IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 535
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 63   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISAFHQ 115

Query: 536  TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFN-AAGRSKCY 712
            ++  ER L ++   +++LL + NL P +      ++    G +ER F++++ + G SK Y
Sbjct: 116  SRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSESTGHSKGY 175

Query: 713  GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDLNV 886
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V
Sbjct: 176  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFSDV 235

Query: 887  EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRV 1066
            +  +R   S       C L  G +   +G            ++A +  DG    G  +RV
Sbjct: 236  D-TLRRALSTVHTPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQRADGLALGGSHLRV 294

Query: 1067 SFANPAK----------SPQSYKLRFG--------------NSSQS-------NNFANMN 1153
            SF  P            + Q+  L  G              N   S       N   + +
Sbjct: 295  SFCAPGPPGRSMLAALIAAQATALNRGKGLLPEPNILQLLNNLGPSASLQLLLNPLLHSS 354

Query: 1154 RGAHSGMMGANPMRGQMPMQVVGQRYRAPA-RTGMMQYGRGSHVGKPNNQGHASASGMLV 1330
             G   G++GA P    MP+         PA  T ++Q    +   K          G+L 
Sbjct: 355  AGGKQGLLGAPP---TMPL------LNGPALSTALLQLALQTQSQK--------KPGILG 397

Query: 1331 TNTGPTGMMGRPPMNMLSRRANATGGNMPPLHPPSAQGHGPPNPPAIAQTEGSKL*LPAA 1510
             +   T   G  P N L    +A GG +PP  PP      P  PP +  + G +  +   
Sbjct: 398  DSPLGTLQPGAQPANPLLGELSA-GGGLPPELPPRRGKPPPLLPPLLGPSGGDRETMGLG 456

Query: 1511 VPANTTTDIP 1540
             PA   T  P
Sbjct: 457  PPAPQLTPPP 466


>ref|XP_005208761.1| PREDICTED: ribonucleoprotein PTB-binding 1 isoform X2 [Bos taurus]
          Length = 711

 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 104/427 (24%), Positives = 164/427 (38%), Gaps = 32/427 (7%)
 Frame = +2

Query: 356  IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 535
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 80   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISAFHQ 132

Query: 536  TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 712
            ++  ER L ++   +++LL + NL P +      ++    G +ER F++++   G SK Y
Sbjct: 133  SRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGY 192

Query: 713  GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDLNV 886
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V
Sbjct: 193  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFSDV 252

Query: 887  EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRV 1066
            +  +R   S       C L  G +   +G            ++A +  DG    G  +RV
Sbjct: 253  DA-LRRALSAVHTPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQRADGLALGGSHLRV 311

Query: 1067 SFANPAKSPQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQVVGQRYR--AP 1240
            SF  P   P    L    ++Q+     +NRG           +G +P   + Q      P
Sbjct: 312  SFCAPG-PPGRSMLAALIAAQA---TALNRG-----------KGLLPEPNILQLLNNLGP 356

Query: 1241 ARTGMMQYGRGSHVGKPNNQGHASASGMLVTNTGPT------------------GMMGRP 1366
            + +  +      H G    QG   A   +    GP                   G++G  
Sbjct: 357  SASLQLLLNPLLHGGAGGKQGLLGAPPAVPLLNGPALSTALLQLALQTQSQKKPGILGDS 416

Query: 1367 PMNMLSRRAN---------ATGGNMPPLHPPSAQGHGPPNPPAIAQTEGSKL*LPAAVPA 1519
            P+  L   A          + GG +PP  PP      P  PP +  + G +  +    PA
Sbjct: 417  PLGTLQPGAQPANPLLGELSAGGGLPPELPPRRGKPPPLLPPLLGPSGGDREPMGLGPPA 476

Query: 1520 NTTTDIP 1540
               T  P
Sbjct: 477  PQLTPPP 483


>ref|XP_005208760.1| PREDICTED: ribonucleoprotein PTB-binding 1 isoform X1 [Bos taurus]
          Length = 758

 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 104/427 (24%), Positives = 164/427 (38%), Gaps = 32/427 (7%)
 Frame = +2

Query: 356  IKVIGGSTCEEELMPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQN 535
            I+ + G    +E+  L SD+       F ++ K TA +    T+  GE   E        
Sbjct: 80   IRGLPGDVTNQEVHDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAISAFHQ 132

Query: 536  TQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCY 712
            ++  ER L ++   +++LL + NL P +      ++    G +ER F++++   G SK Y
Sbjct: 133  SRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGY 192

Query: 713  GFVEYGLKSQAYAAKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDLNV 886
            GF EY  K  A  AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V
Sbjct: 193  GFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFSDV 252

Query: 887  EGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRV 1066
            +  +R   S       C L  G +   +G            ++A +  DG    G  +RV
Sbjct: 253  DA-LRRALSAVHTPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQRADGLALGGSHLRV 311

Query: 1067 SFANPAKSPQSYKLRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQVVGQRYR--AP 1240
            SF  P   P    L    ++Q+     +NRG           +G +P   + Q      P
Sbjct: 312  SFCAPG-PPGRSMLAALIAAQA---TALNRG-----------KGLLPEPNILQLLNNLGP 356

Query: 1241 ARTGMMQYGRGSHVGKPNNQGHASASGMLVTNTGPT------------------GMMGRP 1366
            + +  +      H G    QG   A   +    GP                   G++G  
Sbjct: 357  SASLQLLLNPLLHGGAGGKQGLLGAPPAVPLLNGPALSTALLQLALQTQSQKKPGILGDS 416

Query: 1367 PMNMLSRRAN---------ATGGNMPPLHPPSAQGHGPPNPPAIAQTEGSKL*LPAAVPA 1519
            P+  L   A          + GG +PP  PP      P  PP +  + G +  +    PA
Sbjct: 417  PLGTLQPGAQPANPLLGELSAGGGLPPELPPRRGKPPPLLPPLLGPSGGDREPMGLGPPA 476

Query: 1520 NTTTDIP 1540
               T  P
Sbjct: 477  PQLTPPP 483


>ref|XP_002834447.2| PREDICTED: LOW QUALITY PROTEIN: ribonucleoprotein PTB-binding 1
            [Pongo abelii]
          Length = 759

 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 110/479 (22%), Positives = 180/479 (37%), Gaps = 35/479 (7%)
 Frame = +2

Query: 224  KEGKDEEKSSVLDKKDTAKEDDGMPPEADGVSIPS---HWHEKSGLRIKVIGGSTCEEEL 394
            K G + E     +++   +E   + PE     +      +  +  + I+ + G    +E+
Sbjct: 33   KSGAEVEAGDAAERRAPEEELPPLDPEEIRKRLEHTERQFRNRRKILIRGLPGDVTNQEV 92

Query: 395  MPLFSDFGQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQNTQFGERTLLIEPF 574
              L SD+       F ++ K TA +    T+  GE   E        ++  ER L ++  
Sbjct: 93   HDLLSDYEL--KYCFVDKYKGTAFV----TLLNGEQ-AEAAINAFHQSRLRERELSVQLQ 145

Query: 575  QSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA-AGRSKCYGFVEYGLKSQAYA 751
             +++LL + NL P +      ++    G +ER F++++   G SK YGF EY  K  A  
Sbjct: 146  PTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAAR 205

Query: 752  AKSAMGNISMDGRVLRVEWSDCRKV--ADMFSSVLFVDRLPKDDLNVEGNIRTLFSQYGK 925
            AKS +    +  R L V W+D  ++  A + S  L VDRLP    +V+   R L + +  
Sbjct: 206  AKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFNDVDALCRALSAVHSP 265

Query: 926  VRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAKSPQSYK 1105
               C L  G +   +G            ++A +  DG    G  +RVSF  P   P    
Sbjct: 266  T-FCQLACGQDGQLKGFAVLEYETAEMAEEAQQRADGLSLGGSHLRVSFCAPG-PPGRSM 323

Query: 1106 LRFGNSSQSNNFANMNRGAHSGMMGANPMRGQMPMQVVGQRYR--APARTGMMQYGRGSH 1279
            L    ++Q+     +NRG           +G +P   + Q +    P+ +  +      H
Sbjct: 324  LAALIAAQA---TALNRG-----------KGLLPEPNILQLFNNLGPSASLQLLLNPLLH 369

Query: 1280 VGKPNNQGHASASGMLVTNTGPT------------------GMMGRPPMNMLSRRAN--- 1396
                  QG   A   +    GP                   G++G  P+  L   A    
Sbjct: 370  GSAGGKQGLLGAPPAMPLLNGPALSTALLQLALQTQGQKKPGILGDSPLGALQPGAQPAN 429

Query: 1397 ------ATGGNMPPLHPPSAQGHGPPNPPAIAQTEGSKL*LPAAVPANTTTDIPTSAAV 1555
                    GG +PP  PP      P  P  +    G +  L    PA   T  P S  +
Sbjct: 430  PLLGELPAGGGLPPELPPRRGKPPPLLPSVLGPAGGDREALGLGPPAAQLTPPPASVGL 488