BLASTX nr result
ID: Ephedra27_contig00004658
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00004658
(767 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT19052.1| Splicing factor U2AF 50 kDa subunit [Aegilops tau... 66 1e-08
ref|XP_003558854.1| PREDICTED: uncharacterized protein LOC100840... 65 3e-08
gb|EMS68073.1| Splicing factor U2AF 50 kDa subunit [Triticum ura... 64 4e-08
gb|AFW89625.1| hypothetical protein ZEAMMB73_282398 [Zea mays] 60 1e-06
gb|AFW89624.1| hypothetical protein ZEAMMB73_282398 [Zea mays] 60 1e-06
ref|NP_001170011.1| uncharacterized protein LOC100383918 [Zea ma... 60 1e-06
gb|EAZ25510.1| hypothetical protein OsJ_09334 [Oryza sativa Japo... 60 1e-06
ref|NP_001048907.1| Os03g0138100 [Oryza sativa Japonica Group] g... 60 1e-06
gb|ABF93875.1| RNA recognition motif family protein, expressed [... 60 1e-06
gb|ABF93874.1| RNA recognition motif family protein, expressed [... 60 1e-06
ref|XP_004160593.1| PREDICTED: uncharacterized LOC101213128 [Cuc... 59 1e-06
ref|XP_004147181.1| PREDICTED: uncharacterized protein LOC101213... 59 1e-06
ref|XP_006649367.1| PREDICTED: splicing factor U2af large subuni... 57 5e-06
>gb|EMT19052.1| Splicing factor U2AF 50 kDa subunit [Aegilops tauschii]
Length = 1232
Score = 66.2 bits (160), Expect = 1e-08
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Frame = +3
Query: 150 SGISDCASHEKQEQTDREQPVQHGGNSKEPRDPPLSESLAATAIDEIQSVTSDTVDNKTS 329
+ + D + D+E H +++ +D TA+D+IQ+ +D +T
Sbjct: 1058 TAVGDIHAKAAGPTVDQEMEADHMDSTQADQD--------GTAVDDIQARAADMDSTQTD 1109
Query: 330 LNMGISNKE--GE-HTGPVD---------GEKLTNGEADKNSPN----SEGGKS------ 443
+ ++ GE H GP G+ + E +K + SE G+
Sbjct: 1110 QDASAVGEDSLGEGHAGPTTLEACGSTTPGDVVETSETEKEQQSADDVSESGEEKQPVAV 1169
Query: 444 ------TPTSDQ--LEEASIFVEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRW 599
P SD LE SI VEF+R+E AC+AAH+LHGR +G + VS Y Y +
Sbjct: 1170 ADTRDVAPVSDTIVLEAGSILVEFMRKEAACMAAHSLHGRSFGDRTVSAGYAPHDLYLQR 1229
Query: 600 FPR 608
+PR
Sbjct: 1230 YPR 1232
>ref|XP_003558854.1| PREDICTED: uncharacterized protein LOC100840355 [Brachypodium
distachyon]
Length = 840
Score = 64.7 bits (156), Expect = 3e-08
Identities = 50/200 (25%), Positives = 77/200 (38%), Gaps = 25/200 (12%)
Frame = +3
Query: 84 DVTHTIADNSENGARDGLISCCSGISDCASHEKQEQTDREQPVQHGGNSKEPRDPPLSES 263
DV H +++ E+ D L C + D+ + H DP L +
Sbjct: 653 DVDHPSSESQEHKELDTLCEC----------DVPAAVDQYTDLDH--IHATAADPALDQH 700
Query: 264 LAATAIDEIQSVTSDTVDNKTSLNMGISNKEGEHTGP--------------VDGEKLTNG 401
+ A +D Q+V D+ + H GP VD + N
Sbjct: 701 MEADHMDSKQAVHMDSTQADHHATTVDDDSAVGHAGPRTLEICSSTTPGDVVDTSERENQ 760
Query: 402 EADKNSPNSEGGKSTPTSD-----------QLEEASIFVEFLREETACLAAHNLHGREYG 548
+ N + G + P + LE SI VEF+R+E AC+AAH+LHGR +G
Sbjct: 761 QQGTNDVSESGAEQLPEAGTRDDALVSGTIMLEAGSILVEFMRKEAACMAAHSLHGRSFG 820
Query: 549 SKKVSVSYFSETSYQRWFPR 608
+ +S Y Y + +PR
Sbjct: 821 DRSLSAGYAPHDLYLQMYPR 840
>gb|EMS68073.1| Splicing factor U2AF 50 kDa subunit [Triticum urartu]
Length = 1253
Score = 64.3 bits (155), Expect = 4e-08
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Frame = +3
Query: 186 EQTDREQPVQHGGNSKEPRDPPLSESLAATAIDEIQSVTSDTVDNKTSLNMGISNKE--G 359
+ D+E H +++ +D TA+D IQ +D +T + ++ G
Sbjct: 1099 DTVDQEMEADHMDSTQADQD--------GTAVDYIQGRAADMDSTQTDQDASPVGEDSLG 1150
Query: 360 E-HTGPV-----------------DGEKLTNGEADKNSPNSEGGKSTPTSDQ--LEEASI 479
E H GP + EK D + +E P SD LE SI
Sbjct: 1151 EGHAGPTTLEACGSTTPVGVVEKSETEKEQQSADDVSESGAEKLPVAPVSDTIVLEAGSI 1210
Query: 480 FVEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
VEF+R+E AC+AAH+LHGR +G + VS Y Y + +PR
Sbjct: 1211 LVEFMRKEAACMAAHSLHGRSFGDRTVSAGYAPHALYLQRYPR 1253
>gb|AFW89625.1| hypothetical protein ZEAMMB73_282398 [Zea mays]
Length = 635
Score = 59.7 bits (143), Expect = 1e-06
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = +3
Query: 264 LAATAIDEIQSVTSDTVDNKTSLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEGGKS 443
+ ATA D+ +V D +TS + + P + G+ ++ P E ++
Sbjct: 520 VTATATDD-DAVEKSHGDPRTSETCNPAGPTDKAEKPGRYSEQGAGDVTEDRPEKEA-QA 577
Query: 444 TPTSDQ---LEEASIFVEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
TSD E S+ VEFLREE AC+AAH+LHGR +G++ V Y Y + +PR
Sbjct: 578 VGTSDTGFVFEPGSVLVEFLREEAACMAAHSLHGRRFGNRTVHAGYAPYDLYLQKYPR 635
>gb|AFW89624.1| hypothetical protein ZEAMMB73_282398 [Zea mays]
Length = 378
Score = 59.7 bits (143), Expect = 1e-06
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = +3
Query: 264 LAATAIDEIQSVTSDTVDNKTSLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEGGKS 443
+ ATA D+ +V D +TS + + P + G+ ++ P E ++
Sbjct: 263 VTATATDD-DAVEKSHGDPRTSETCNPAGPTDKAEKPGRYSEQGAGDVTEDRPEKEA-QA 320
Query: 444 TPTSDQ---LEEASIFVEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
TSD E S+ VEFLREE AC+AAH+LHGR +G++ V Y Y + +PR
Sbjct: 321 VGTSDTGFVFEPGSVLVEFLREEAACMAAHSLHGRRFGNRTVHAGYAPYDLYLQKYPR 378
>ref|NP_001170011.1| uncharacterized protein LOC100383918 [Zea mays]
gi|224032879|gb|ACN35515.1| unknown [Zea mays]
Length = 331
Score = 59.7 bits (143), Expect = 1e-06
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = +3
Query: 264 LAATAIDEIQSVTSDTVDNKTSLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEGGKS 443
+ ATA D+ +V D +TS + + P + G+ ++ P E ++
Sbjct: 216 VTATATDD-DAVEKSHGDPRTSETCNPAGPTDKAEKPGRYSEQGAGDVTEDRPEKEA-QA 273
Query: 444 TPTSDQ---LEEASIFVEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
TSD E S+ VEFLREE AC+AAH+LHGR +G++ V Y Y + +PR
Sbjct: 274 VGTSDTGFVFEPGSVLVEFLREEAACMAAHSLHGRRFGNRTVHAGYAPYDLYLQKYPR 331
>gb|EAZ25510.1| hypothetical protein OsJ_09334 [Oryza sativa Japonica Group]
Length = 942
Score = 59.7 bits (143), Expect = 1e-06
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +3
Query: 327 SLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEGGKSTPTSDQ--------LEEASIF 482
SL S G+ E G A + N+E + D LE I
Sbjct: 841 SLETSCSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARDNALASNTSALEAGCIL 900
Query: 483 VEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
VEFLR+E AC+AAH+LHGR +GS+ VS Y Y + +PR
Sbjct: 901 VEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 942
>ref|NP_001048907.1| Os03g0138100 [Oryza sativa Japonica Group]
gi|113547378|dbj|BAF10821.1| Os03g0138100 [Oryza sativa
Japonica Group]
Length = 404
Score = 59.7 bits (143), Expect = 1e-06
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +3
Query: 327 SLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEGGKSTPTSDQ--------LEEASIF 482
SL S G+ E G A + N+E + D LE I
Sbjct: 303 SLETSCSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARDNALASNTSALEAGCIL 362
Query: 483 VEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
VEFLR+E AC+AAH+LHGR +GS+ VS Y Y + +PR
Sbjct: 363 VEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 404
>gb|ABF93875.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 59.7 bits (143), Expect = 1e-06
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +3
Query: 327 SLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEGGKSTPTSDQ--------LEEASIF 482
SL S G+ E G A + N+E + D LE I
Sbjct: 863 SLETSCSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARDNALASNTSALEAGCIL 922
Query: 483 VEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
VEFLR+E AC+AAH+LHGR +GS+ VS Y Y + +PR
Sbjct: 923 VEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 964
>gb|ABF93874.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 59.7 bits (143), Expect = 1e-06
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +3
Query: 327 SLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEGGKSTPTSDQ--------LEEASIF 482
SL S G+ E G A + N+E + D LE I
Sbjct: 863 SLETSCSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARDNALASNTSALEAGCIL 922
Query: 483 VEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
VEFLR+E AC+AAH+LHGR +GS+ VS Y Y + +PR
Sbjct: 923 VEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 964
>ref|XP_004160593.1| PREDICTED: uncharacterized LOC101213128 [Cucumis sativus]
Length = 918
Score = 59.3 bits (142), Expect = 1e-06
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 8/210 (3%)
Frame = +3
Query: 3 QVNSSTQIVIEDSKLQQNSAMQINKDDDVTHTIADNSENGA-RDGLIS---CCSGISDCA 170
Q NS+T I + L+ N+A N D A+ +NG +D + C G +D
Sbjct: 717 QENSTTVISRNSNDLEDNNANLDNCPSDSNQKQANCPDNGRHQDEAVEDKLCQMGNTDAT 776
Query: 171 SHEKQEQTDREQPVQHGGNSKEPRDPPLSESLAATAIDEIQS-VTSDTVDNKTSLNMGIS 347
E + + + H E R P ++ A + I++ + V + S +M
Sbjct: 777 CFEVADCENASERTGHV--LSEQRSSPENDFQDAKVTEIIETGLDKKLVCVEASSSMMAD 834
Query: 348 NKEGEHTGPVDGEKLTNGEADKNSPNSEGGKSTPTSDQ---LEEASIFVEFLREETACLA 518
N++ G ++ + +K+ K P ++Q S+FVEF R E +C+A
Sbjct: 835 NEKKSLNGLDPVVRIASNAVEKSE------KKDPDNNQESLFVLGSVFVEFGRIEASCMA 888
Query: 519 AHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
AH+LHGR Y +++S+ Y Y++ FP+
Sbjct: 889 AHSLHGRIYDGQEISIEYIPHGLYRKRFPK 918
>ref|XP_004147181.1| PREDICTED: uncharacterized protein LOC101213128 [Cucumis sativus]
Length = 910
Score = 59.3 bits (142), Expect = 1e-06
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 8/210 (3%)
Frame = +3
Query: 3 QVNSSTQIVIEDSKLQQNSAMQINKDDDVTHTIADNSENGA-RDGLIS---CCSGISDCA 170
Q NS+T I + L+ N+A N D A+ +NG +D + C G +D
Sbjct: 709 QENSTTVISRNSNDLEDNNANLDNCPSDSNQKQANCPDNGRHQDEAVEDKLCQMGNTDAT 768
Query: 171 SHEKQEQTDREQPVQHGGNSKEPRDPPLSESLAATAIDEIQS-VTSDTVDNKTSLNMGIS 347
E + + + H E R P ++ A + I++ + V + S +M
Sbjct: 769 CFEVADCENASERTGHV--LSEQRSSPENDFQDAKVTEIIETGLDKKLVCVEASSSMMAD 826
Query: 348 NKEGEHTGPVDGEKLTNGEADKNSPNSEGGKSTPTSDQ---LEEASIFVEFLREETACLA 518
N++ G ++ + +K+ K P ++Q S+FVEF R E +C+A
Sbjct: 827 NEKKSLNGLDPVVRIASNAVEKSE------KKDPDNNQESLFVLGSVFVEFGRIEASCMA 880
Query: 519 AHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
AH+LHGR Y +++S+ Y Y++ FP+
Sbjct: 881 AHSLHGRIYDGQEISIEYIPHGLYRKRFPK 910
>ref|XP_006649367.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Oryza brachyantha] gi|573923585|ref|XP_006649368.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X2 [Oryza brachyantha]
gi|573923587|ref|XP_006649369.1| PREDICTED: splicing
factor U2af large subunit B-like isoform X3 [Oryza
brachyantha]
Length = 957
Score = 57.4 bits (137), Expect = 5e-06
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +3
Query: 345 SNKEGEHTGPVDGEKLTNGEADKN-SPNSEGGKSTPTSDQLEEASIFVEFLREETACLAA 521
++K G G ++ +K + ++ S ++ LE I VEFLR+E AC AA
Sbjct: 869 ADKPGRENEQQCGTGVSESNTEKAPAVDARDSASASSTSALEAGCILVEFLRKEAACTAA 928
Query: 522 HNLHGREYGSKKVSVSYFSETSYQRWFPR 608
H+LHGR +GS+ VS Y Y + +PR
Sbjct: 929 HSLHGRRFGSRIVSAGYAPHDLYLQKYPR 957