BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00004477
         (817 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004975454.1| PREDICTED: chaperone protein ClpC1, chloropl...   103   1e-19
ref|XP_001766888.1| predicted protein [Physcomitrella patens] gi...   100   1e-18
ref|XP_001756645.1| predicted protein [Physcomitrella patens] gi...    99   2e-18
ref|XP_001766010.1| predicted protein [Physcomitrella patens] gi...    99   2e-18
ref|XP_006652229.1| PREDICTED: chaperone protein ClpC1, chloropl...    99   2e-18
emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa Japonica Group]          99   2e-18
sp|Q7F9I1.2|CLPC1_ORYSJ RecName: Full=Chaperone protein ClpC1, c...    99   2e-18
gb|EEC77203.1| hypothetical protein OsI_15715 [Oryza sativa Indi...    99   2e-18
gb|EAZ30583.1| hypothetical protein OsJ_14634 [Oryza sativa Japo...    99   2e-18
ref|NP_001052665.1| Os04g0397100 [Oryza sativa Japonica Group] g...    99   2e-18
ref|XP_004975455.1| PREDICTED: chaperone protein ClpC1, chloropl...    98   3e-18
gb|EEC69045.1| hypothetical protein OsI_37876 [Oryza sativa Indi...    98   4e-18
ref|NP_001066442.1| Os12g0230100 [Oryza sativa Japonica Group] g...    98   4e-18
ref|XP_006663917.1| PREDICTED: chaperone protein ClpC2, chloropl...    97   7e-18
gb|EMS54415.1| ATP-dependent Clp protease ATP-binding subunit cl...    97   7e-18
tpg|DAA38058.1| TPA: hypothetical protein ZEAMMB73_793135 [Zea m...    97   7e-18
ref|XP_002965312.1| hypothetical protein SELMODRAFT_439163 [Sela...    97   7e-18
ref|XP_002977161.1| hypothetical protein SELMODRAFT_176012 [Sela...    97   7e-18
ref|XP_002447724.1| hypothetical protein SORBIDRAFT_06g014590 [S...    97   7e-18
ref|NP_001183625.1| uncharacterized protein LOC100502219 [Zea ma...    97   7e-18

>ref|XP_004975454.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like [Setaria
            italica]
          Length = 921

 Score =  103 bits (256), Expect = 1e-19
 Identities = 48/73 (65%), Positives = 63/73 (86%)
 Frame = -2

Query: 816  NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
            +IDLQVTE F++ V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+CIVD++
Sbjct: 838  DIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSCIVDVD 897

Query: 636  ENGKVVVLNGTTG 598
              GKV+VLNG++G
Sbjct: 898  SEGKVIVLNGSSG 910


>ref|XP_001766888.1| predicted protein [Physcomitrella patens]
           gi|162681867|gb|EDQ68290.1| predicted protein
           [Physcomitrella patens]
          Length = 836

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 48/72 (66%), Positives = 60/72 (83%)
 Frame = -2

Query: 813 IDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLNE 634
           IDLQVTE F++ V  +GYS SYGAR LRR IMR+LED++AE+MLSGEI EGD+ I+D++ 
Sbjct: 750 IDLQVTERFRDRVVEEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEIKEGDSAIIDVDG 809

Query: 633 NGKVVVLNGTTG 598
           +G V VLNGTTG
Sbjct: 810 DGNVTVLNGTTG 821


>ref|XP_001756645.1| predicted protein [Physcomitrella patens] gi|162692241|gb|EDQ78599.1|
            predicted protein [Physcomitrella patens]
          Length = 933

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 48/72 (66%), Positives = 60/72 (83%)
 Frame = -2

Query: 813  IDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLNE 634
            IDLQVTE F++ V  +GYS SYGAR LRR IMR+LED++AE+MLSGEI EGD+ I+D++ 
Sbjct: 847  IDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEIKEGDSAIIDVDG 906

Query: 633  NGKVVVLNGTTG 598
            +G V VLNGTTG
Sbjct: 907  DGNVTVLNGTTG 918


>ref|XP_001766010.1| predicted protein [Physcomitrella patens]
           gi|162682653|gb|EDQ69069.1| predicted protein
           [Physcomitrella patens]
          Length = 836

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 48/72 (66%), Positives = 60/72 (83%)
 Frame = -2

Query: 813 IDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLNE 634
           IDLQVTE F++ V  +GYS SYGAR LRR IMR+LED++AE+MLSGEI EGD+ I+D++ 
Sbjct: 750 IDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEIKEGDSAIIDVDG 809

Query: 633 NGKVVVLNGTTG 598
           +G V VLNGTTG
Sbjct: 810 DGNVTVLNGTTG 821


>ref|XP_006652229.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like [Oryza
            brachyantha]
          Length = 888

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 47/73 (64%), Positives = 61/73 (83%)
 Frame = -2

Query: 816  NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
            +IDLQVTE F++ V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 805  DIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 864

Query: 636  ENGKVVVLNGTTG 598
              GKV+VLNG +G
Sbjct: 865  SEGKVIVLNGGSG 877


>emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa Japonica Group]
          Length = 888

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 47/73 (64%), Positives = 61/73 (83%)
 Frame = -2

Query: 816  NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
            +IDLQVTE F++ V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 805  DIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 864

Query: 636  ENGKVVVLNGTTG 598
              GKV+VLNG +G
Sbjct: 865  SEGKVIVLNGGSG 877


>sp|Q7F9I1.2|CLPC1_ORYSJ RecName: Full=Chaperone protein ClpC1, chloroplastic; AltName:
            Full=ATP-dependent Clp protease ATP-binding subunit ClpC
            homolog 1; AltName: Full=Casein lytic proteinase C1;
            Flags: Precursor
          Length = 918

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 47/73 (64%), Positives = 61/73 (83%)
 Frame = -2

Query: 816  NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
            +IDLQVTE F++ V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 835  DIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 894

Query: 636  ENGKVVVLNGTTG 598
              GKV+VLNG +G
Sbjct: 895  SEGKVIVLNGGSG 907


>gb|EEC77203.1| hypothetical protein OsI_15715 [Oryza sativa Indica Group]
          Length = 114

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 47/73 (64%), Positives = 61/73 (83%)
 Frame = -2

Query: 816 NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
           +IDLQVTE F++ V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 31  DIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 90

Query: 636 ENGKVVVLNGTTG 598
             GKV+VLNG +G
Sbjct: 91  SEGKVIVLNGGSG 103


>gb|EAZ30583.1| hypothetical protein OsJ_14634 [Oryza sativa Japonica Group]
          Length = 1033

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 47/73 (64%), Positives = 61/73 (83%)
 Frame = -2

Query: 816  NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
            +IDLQVTE F++ V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 950  DIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 1009

Query: 636  ENGKVVVLNGTTG 598
              GKV+VLNG +G
Sbjct: 1010 SEGKVIVLNGGSG 1022


>ref|NP_001052665.1| Os04g0397100 [Oryza sativa Japonica Group]
           gi|113564236|dbj|BAF14579.1| Os04g0397100, partial
           [Oryza sativa Japonica Group]
          Length = 403

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 47/73 (64%), Positives = 61/73 (83%)
 Frame = -2

Query: 816 NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
           +IDLQVTE F++ V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 320 DIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 379

Query: 636 ENGKVVVLNGTTG 598
             GKV+VLNG +G
Sbjct: 380 SEGKVIVLNGGSG 392


>ref|XP_004975455.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like [Setaria
            italica]
          Length = 918

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 47/73 (64%), Positives = 61/73 (83%)
 Frame = -2

Query: 816  NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
            +IDLQVTE F++ V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 835  DIDLQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 894

Query: 636  ENGKVVVLNGTTG 598
              GKV+VLNG +G
Sbjct: 895  SEGKVIVLNGGSG 907


>gb|EEC69045.1| hypothetical protein OsI_37876 [Oryza sativa Indica Group]
          Length = 1412

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 46/73 (63%), Positives = 60/73 (82%)
 Frame = -2

Query: 816  NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
            +IDLQVTE FK  +  +G++ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 1329 DIDLQVTEKFKERIVDEGFNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 1388

Query: 636  ENGKVVVLNGTTG 598
              GKV+VLNG +G
Sbjct: 1389 SEGKVIVLNGQSG 1401


>ref|NP_001066442.1| Os12g0230100 [Oryza sativa Japonica Group]
            gi|122248633|sp|Q2QVG9.2|CLPC2_ORYSJ RecName:
            Full=Chaperone protein ClpC2, chloroplastic; AltName:
            Full=ATP-dependent Clp protease ATP-binding subunit ClpC
            homolog 2; AltName: Full=Casein lytic proteinase C2;
            Flags: Precursor gi|108862366|gb|ABA96309.2|
            ATP-dependent Clp protease ATP-binding subunit clpA
            CD4B,chloroplast precursor, putative, expressed [Oryza
            sativa Japonica Group] gi|108862367|gb|ABG21929.1|
            ATP-dependent Clp protease ATP-binding subunit clpA
            CD4B,chloroplast precursor, putative, expressed [Oryza
            sativa Japonica Group] gi|113648949|dbj|BAF29461.1|
            Os12g0230100 [Oryza sativa Japonica Group]
          Length = 919

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 46/73 (63%), Positives = 60/73 (82%)
 Frame = -2

Query: 816  NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
            +IDLQVTE FK  +  +G++ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 836  DIDLQVTEKFKERIVDEGFNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 895

Query: 636  ENGKVVVLNGTTG 598
              GKV+VLNG +G
Sbjct: 896  SEGKVIVLNGQSG 908


>ref|XP_006663917.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like [Oryza
            brachyantha]
          Length = 919

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 48/73 (65%), Positives = 59/73 (80%)
 Frame = -2

Query: 816  NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
            +I LQVTE FK  V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 836  DIALQVTEKFKERVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 895

Query: 636  ENGKVVVLNGTTG 598
              GKVVVLNG +G
Sbjct: 896  SEGKVVVLNGQSG 908


>gb|EMS54415.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
           CD4B, chloroplastic [Triticum urartu]
          Length = 384

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 47/72 (65%), Positives = 59/72 (81%)
 Frame = -2

Query: 813 IDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLNE 634
           IDLQVTE F++ V   GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++ 
Sbjct: 302 IDLQVTERFRDRVVDDGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDS 361

Query: 633 NGKVVVLNGTTG 598
            GKV+VLNG +G
Sbjct: 362 EGKVIVLNGGSG 373


>tpg|DAA38058.1| TPA: hypothetical protein ZEAMMB73_793135 [Zea mays]
          Length = 896

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 46/73 (63%), Positives = 62/73 (84%)
 Frame = -2

Query: 816  NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
            +I+LQVTE F++ V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 813  DINLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 872

Query: 636  ENGKVVVLNGTTG 598
             +GKV+VLNG +G
Sbjct: 873  SDGKVIVLNGGSG 885


>ref|XP_002965312.1| hypothetical protein SELMODRAFT_439163 [Selaginella moellendorffii]
            gi|300167545|gb|EFJ34150.1| hypothetical protein
            SELMODRAFT_439163 [Selaginella moellendorffii]
          Length = 937

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 46/72 (63%), Positives = 58/72 (80%)
 Frame = -2

Query: 813  IDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLNE 634
            IDLQVTE F++ V  +GYS SYGAR LRR IMR+LED++AE+MLSGE+ EGD+ I+D++ 
Sbjct: 852  IDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEVKEGDSAIIDVDS 911

Query: 633  NGKVVVLNGTTG 598
             G V VLNGT G
Sbjct: 912  EGNVTVLNGTAG 923


>ref|XP_002977161.1| hypothetical protein SELMODRAFT_176012 [Selaginella moellendorffii]
            gi|300155137|gb|EFJ21770.1| hypothetical protein
            SELMODRAFT_176012 [Selaginella moellendorffii]
          Length = 901

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 46/72 (63%), Positives = 58/72 (80%)
 Frame = -2

Query: 813  IDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLNE 634
            IDLQVTE F++ V  +GYS SYGAR LRR IMR+LED++AE+MLSGE+ EGD+ I+D++ 
Sbjct: 816  IDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEVKEGDSAIIDVDS 875

Query: 633  NGKVVVLNGTTG 598
             G V VLNGT G
Sbjct: 876  EGNVTVLNGTAG 887


>ref|XP_002447724.1| hypothetical protein SORBIDRAFT_06g014590 [Sorghum bicolor]
            gi|241938907|gb|EES12052.1| hypothetical protein
            SORBIDRAFT_06g014590 [Sorghum bicolor]
          Length = 921

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 46/73 (63%), Positives = 62/73 (84%)
 Frame = -2

Query: 816  NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
            +I+LQVTE F++ V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 838  DINLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 897

Query: 636  ENGKVVVLNGTTG 598
             +GKV+VLNG +G
Sbjct: 898  SDGKVIVLNGGSG 910


>ref|NP_001183625.1| uncharacterized protein LOC100502219 [Zea mays]
           gi|238013508|gb|ACR37789.1| unknown [Zea mays]
          Length = 196

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 46/73 (63%), Positives = 62/73 (84%)
 Frame = -2

Query: 816 NIDLQVTEPFKNFVYRQGYSSSYGARQLRRVIMRVLEDNLAEKMLSGEINEGDTCIVDLN 637
           +I+LQVTE F++ V  +GY+ SYGAR LRR IMR+LED+LAEKML+GE+ EGD+ IVD++
Sbjct: 113 DINLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVD 172

Query: 636 ENGKVVVLNGTTG 598
            +GKV+VLNG +G
Sbjct: 173 SDGKVIVLNGGSG 185