BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00004382
         (420 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006842073.1| hypothetical protein AMTR_s00078p00056260 [A...   129   4e-28
ref|XP_006842072.1| hypothetical protein AMTR_s00078p00055040 [A...   129   5e-28
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     127   2e-27
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   126   3e-27
ref|XP_006645957.1| PREDICTED: probable RNA-dependent RNA polyme...   126   3e-27
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L...   125   4e-27
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   125   4e-27
sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA ...   125   4e-27
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   125   4e-27
gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japo...   125   4e-27
gb|EEC70798.1| hypothetical protein OsI_02249 [Oryza sativa Indi...   125   4e-27
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    125   4e-27
ref|NP_001043229.1| Os01g0527600 [Oryza sativa Japonica Group] g...   125   4e-27
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   125   6e-27
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   125   6e-27
gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus...   124   1e-26
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   124   1e-26
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]       124   2e-26
gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe...   124   2e-26
ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago trunc...   124   2e-26

>ref|XP_006842073.1| hypothetical protein AMTR_s00078p00056260 [Amborella trichopoda]
            gi|548844122|gb|ERN03748.1| hypothetical protein
            AMTR_s00078p00056260 [Amborella trichopoda]
          Length = 1207

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/137 (49%), Positives = 88/137 (64%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S +GAL+E+CL LA+ AAIAVD PKTGK   LP++LKPK YPDFMEK    SYKSEK+LG
Sbjct: 943  SKDGALDENCLYLAELAAIAVDVPKTGKQVFLPNNLKPKMYPDFMEKDGIFSYKSEKILG 1002

Query: 182  VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
            +LY+                ++P  +   P +D DLE  G + +++EAW  KC YD+ + 
Sbjct: 1003 ILYQ----KIKDAPQLKFDEIEPHSLDDLP-YDLDLEVPGSENFLSEAWHYKCLYDRQII 1057

Query: 362  SLLGQYNVKREGEVVSG 412
              LG YNV  EGEVV+G
Sbjct: 1058 LFLGLYNVSSEGEVVTG 1074


>ref|XP_006842072.1| hypothetical protein AMTR_s00078p00055040 [Amborella trichopoda]
            gi|548844121|gb|ERN03747.1| hypothetical protein
            AMTR_s00078p00055040 [Amborella trichopoda]
          Length = 1207

 Score =  129 bits (323), Expect = 5e-28
 Identities = 68/136 (50%), Positives = 89/136 (65%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S +GAL+E+CL LA+ AAIAVD PKTGK   LP++LKPK YPDFMEK    SYKSEK+LG
Sbjct: 943  SKDGALDENCLYLAELAAIAVDVPKTGKQVFLPNNLKPKMYPDFMEKDGIFSYKSEKILG 1002

Query: 182  VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
            +LYR                ++P+ +   P +D DLE +G + +++EAW  KC YD+ + 
Sbjct: 1003 ILYR----KIKDAPHIKFKEMEPQSLDDLP-YDLDLEVLGSEDFLSEAWHYKCLYDRQII 1057

Query: 362  SLLGQYNVKREGEVVS 409
              LG YNV  EGEVV+
Sbjct: 1058 LFLGLYNVSSEGEVVT 1073


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  127 bits (319), Expect = 2e-27
 Identities = 71/140 (50%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S+ GAL+E CL+LA+ AA+AVDFPKTGK   +P  LKPK YPDFM K E  SYKS+K+LG
Sbjct: 935  SEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILG 994

Query: 182  VLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHL 358
             LYR                 V P+DI     +D  LE +G   +I +AW  KC YD  L
Sbjct: 995  KLYRQVKDVCDAEGEVSAGLEVVPKDIP----YDTTLEILGSTTFIDDAWNSKCSYDGQL 1050

Query: 359  RSLLGQYNVKREGEVVSGYV 418
              LLGQY V RE EVV+GY+
Sbjct: 1051 NGLLGQYKVNREEEVVTGYI 1070


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  126 bits (317), Expect = 3e-27
 Identities = 71/140 (50%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S+ GA +++CL LA+ AA AVDFPKTGK   +P +LKPK YPDFM K E  SYKSEK+LG
Sbjct: 938  SEYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILG 997

Query: 182  VLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHL 358
             LYR                 + P DI     +D+DLE VG   YI++AW  KC YD  L
Sbjct: 998  RLYRQIKDAYDEDVAASSELNLVPGDIP----YDSDLEVVGASDYISDAWDQKCSYDGQL 1053

Query: 359  RSLLGQYNVKREGEVVSGYV 418
              LL QY VKRE EVV+G++
Sbjct: 1054 NGLLSQYKVKREEEVVTGHI 1073


>ref|XP_006645957.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Oryza
            brachyantha]
          Length = 1105

 Score =  126 bits (316), Expect = 3e-27
 Identities = 67/139 (48%), Positives = 85/139 (61%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S+ GA++E C+ LA+ AA AVDFPKTGK  I+P HLKPK YPDFM K E+LSYKSEK+LG
Sbjct: 845  SEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPQHLKPKVYPDFMGKEESLSYKSEKILG 904

Query: 182  VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
             LYR                  P D+     +D DLE  G   ++A AW+ KC Y+  L 
Sbjct: 905  RLYRSIQEASNGDVVSEEVCT-PNDLP----YDIDLEVPGASDFLASAWQCKCSYEAQLS 959

Query: 362  SLLGQYNVKREGEVVSGYV 418
            +LL QY V  E E+V+G +
Sbjct: 960  ALLNQYKVHTEAELVTGNI 978


>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
          Length = 1201

 Score =  125 bits (315), Expect = 4e-27
 Identities = 70/139 (50%), Positives = 85/139 (61%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            SD GAL+E C+ LA++AA AVDFPKTGK  I+P  LKPK YPDFM K + +SYKS+K+LG
Sbjct: 933  SDYGALDEKCIILAEKAAAAVDFPKTGKLVIMPSELKPKLYPDFMGKDQHMSYKSKKILG 992

Query: 182  VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
             LYR                     I     +D +LE  G   +IA+AWK KC YD  L 
Sbjct: 993  RLYRRIKDAYDKDIDAPELNYVTGAIP----YDTELEVPGSADFIADAWKQKCSYDGQLS 1048

Query: 362  SLLGQYNVKREGEVVSGYV 418
             LLGQY VKRE EVV+G +
Sbjct: 1049 GLLGQYKVKREEEVVTGQI 1067


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  125 bits (315), Expect = 4e-27
 Identities = 67/141 (47%), Positives = 86/141 (60%), Gaps = 2/141 (1%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S  GAL+E+C++L++ AA AVDFPKTGK   +P HLKPK YPDFM K    SYKS K+LG
Sbjct: 934  SKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILG 993

Query: 182  VLYRXXXXXXXXXXXXXXXXVD--PEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQH 355
             +YR                ++  P D+     +D DLE  G + +IAEAW  KC YD  
Sbjct: 994  KMYRRIRDAYDDDDMITSRELNFTPGDVH----YDVDLEVAGAEDFIAEAWDQKCSYDGQ 1049

Query: 356  LRSLLGQYNVKREGEVVSGYV 418
            L  LLGQY V RE E+V+G++
Sbjct: 1050 LSGLLGQYKVNREEEIVTGHI 1070


>sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName:
            Full=Protein SHOOTLESS 2 gi|21328146|dbj|BAC00725.1|
            putative RNA-dependent RNA polymerase [Oryza sativa
            Japonica Group] gi|157279691|dbj|BAF80151.1| SHOOTLESS2
            [Oryza sativa Japonica Group]
          Length = 1218

 Score =  125 bits (315), Expect = 4e-27
 Identities = 66/139 (47%), Positives = 85/139 (61%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S+ GA++E C+ LA+ AA AVDFPKTGK  I+P HLKPK YPDFM K +  SYKSEK+LG
Sbjct: 958  SEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILG 1017

Query: 182  VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
             LYR                  P D+     +D DLE  G   ++A AW+ KC YD  L 
Sbjct: 1018 RLYRSIQEASNGDVVSQEVCT-PNDLP----YDIDLEVPGASDFLASAWQCKCSYDAQLS 1072

Query: 362  SLLGQYNVKREGEVVSGYV 418
            +LL QY V+ E E+V+G++
Sbjct: 1073 ALLSQYRVRTEAELVTGHI 1091


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  125 bits (315), Expect = 4e-27
 Identities = 67/141 (47%), Positives = 86/141 (60%), Gaps = 2/141 (1%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S  GAL+E+C++L++ AA AVDFPKTGK   +P HLKPK YPDFM K    SYKS K+LG
Sbjct: 934  SKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILG 993

Query: 182  VLYRXXXXXXXXXXXXXXXXVD--PEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQH 355
             +YR                ++  P D+     +D DLE  G + +IAEAW  KC YD  
Sbjct: 994  KMYRRIRDAYDDDDMITSRELNFTPGDVH----YDVDLEVAGAEDFIAEAWDQKCSYDGQ 1049

Query: 356  LRSLLGQYNVKREGEVVSGYV 418
            L  LLGQY V RE E+V+G++
Sbjct: 1050 LSGLLGQYKVNREEEIVTGHI 1070


>gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japonica Group]
          Length = 1571

 Score =  125 bits (315), Expect = 4e-27
 Identities = 66/139 (47%), Positives = 85/139 (61%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S+ GA++E C+ LA+ AA AVDFPKTGK  I+P HLKPK YPDFM K +  SYKSEK+LG
Sbjct: 1311 SEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILG 1370

Query: 182  VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
             LYR                  P D+     +D DLE  G   ++A AW+ KC YD  L 
Sbjct: 1371 RLYRSIQEASNGDVVSQEVCT-PNDLP----YDIDLEVPGASDFLASAWQCKCSYDAQLS 1425

Query: 362  SLLGQYNVKREGEVVSGYV 418
            +LL QY V+ E E+V+G++
Sbjct: 1426 ALLSQYRVRTEAELVTGHI 1444


>gb|EEC70798.1| hypothetical protein OsI_02249 [Oryza sativa Indica Group]
          Length = 307

 Score =  125 bits (315), Expect = 4e-27
 Identities = 66/139 (47%), Positives = 85/139 (61%)
 Frame = +2

Query: 2   SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
           S+ GA++E C+ LA+ AA AVDFPKTGK  I+P HLKPK YPDFM K +  SYKSEK+LG
Sbjct: 47  SEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILG 106

Query: 182 VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
            LYR                  P D+     +D DLE  G   ++A AW+ KC YD  L 
Sbjct: 107 RLYRSIQEASNGDVVSQEVCT-PNDLP----YDIDLEVPGASDFLASAWQCKCSYDAQLS 161

Query: 362 SLLGQYNVKREGEVVSGYV 418
           +LL QY V+ E E+V+G++
Sbjct: 162 ALLSQYRVRTEAELVTGHI 180


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  125 bits (315), Expect = 4e-27
 Identities = 70/140 (50%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S+ GAL+E CL+LA+ AA+AVDFPKTGK   +P  LKPK YPDFM K E  SYKS+K+LG
Sbjct: 935  SEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILG 994

Query: 182  VLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHL 358
             LYR                 V P+DI     +D+ LE +G   +I +AW  KC YD  L
Sbjct: 995  KLYRQVKDVCDAEGEVSAGLEVVPKDIP----YDSTLEILGSTAFIDDAWNSKCSYDGQL 1050

Query: 359  RSLLGQYNVKREGEVVSGYV 418
              LLGQY V RE EVV+G++
Sbjct: 1051 HGLLGQYKVNREEEVVTGHI 1070


>ref|NP_001043229.1| Os01g0527600 [Oryza sativa Japonica Group]
           gi|113532760|dbj|BAF05143.1| Os01g0527600, partial
           [Oryza sativa Japonica Group]
          Length = 385

 Score =  125 bits (315), Expect = 4e-27
 Identities = 66/139 (47%), Positives = 85/139 (61%)
 Frame = +2

Query: 2   SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
           S+ GA++E C+ LA+ AA AVDFPKTGK  I+P HLKPK YPDFM K +  SYKSEK+LG
Sbjct: 125 SEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILG 184

Query: 182 VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
            LYR                  P D+     +D DLE  G   ++A AW+ KC YD  L 
Sbjct: 185 RLYRSIQEASNGDVVSQEVCT-PNDLP----YDIDLEVPGASDFLASAWQCKCSYDAQLS 239

Query: 362 SLLGQYNVKREGEVVSGYV 418
           +LL QY V+ E E+V+G++
Sbjct: 240 ALLSQYRVRTEAELVTGHI 258


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571459266|ref|XP_006581359.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  125 bits (314), Expect = 6e-27
 Identities = 70/139 (50%), Positives = 83/139 (59%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            SD GAL+E C+ LA+ AA AVDFPKTGK   +P HLKPK YPDFM K    SY+S+K+LG
Sbjct: 934  SDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQSYRSKKILG 993

Query: 182  VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
             LYR                    DI     +D DLE  G   +IA+AW+ KC YD  L 
Sbjct: 994  RLYRRIKDAYDEDIDAPYLNFVTGDIP----YDKDLEVPGSADFIADAWEQKCSYDGQLS 1049

Query: 362  SLLGQYNVKREGEVVSGYV 418
             LLGQY VKRE EVV+G +
Sbjct: 1050 GLLGQYKVKREEEVVTGQI 1068


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  125 bits (314), Expect = 6e-27
 Identities = 70/140 (50%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S+ GAL+E CL+LA+ AA+AVDFPKTGK   +P  LKPK YPDFM K E  SYKS+K+LG
Sbjct: 935  SEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILG 994

Query: 182  VLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHL 358
             LYR                 V P+DI     +D  LE +G   +I +AW  KC YD  L
Sbjct: 995  KLYRQVKDVCDAEGEVSAGLEVVPKDIP----YDTTLEILGSTTFIDDAWNSKCSYDGQL 1050

Query: 359  RSLLGQYNVKREGEVVSGYV 418
              LLGQY V RE EVV+G++
Sbjct: 1051 NGLLGQYKVNREEEVVTGHI 1070


>gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score =  124 bits (311), Expect = 1e-26
 Identities = 68/139 (48%), Positives = 84/139 (60%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            SD  AL+E C+ LA+ AA AVDFPKTGK   +P+HLKPK YPDFM K +  SY+S+K+LG
Sbjct: 934  SDYDALDEKCIHLAELAATAVDFPKTGKLVTMPYHLKPKLYPDFMGKEKHQSYRSKKVLG 993

Query: 182  VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
             LYR                    DI     +D DLE  G   +IA++W+ KC YD  L 
Sbjct: 994  RLYRRIKDAYDEDIDAPYLNFVSGDIP----YDKDLEVPGSSAFIADSWEQKCAYDGQLS 1049

Query: 362  SLLGQYNVKREGEVVSGYV 418
             LLGQY VKRE EVV+G +
Sbjct: 1050 GLLGQYKVKREEEVVTGQI 1068


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571449461|ref|XP_006578148.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  124 bits (311), Expect = 1e-26
 Identities = 69/139 (49%), Positives = 82/139 (58%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            SD GAL+E C+ LA+ AA AVDFPKTGK   +P HLKPK YPDFM K    SY+S K+LG
Sbjct: 934  SDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQSYRSNKILG 993

Query: 182  VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
             LYR                    DI     +D DLE  G   +IA+AW+ KC YD  L 
Sbjct: 994  RLYRHIKDAYDEDIEAPYLNFVTGDIP----YDKDLEVPGSADFIADAWEQKCSYDGQLS 1049

Query: 362  SLLGQYNVKREGEVVSGYV 418
             L+GQY VKRE EVV+G +
Sbjct: 1050 GLIGQYKVKREEEVVTGQI 1068


>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score =  124 bits (310), Expect = 2e-26
 Identities = 71/140 (50%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            S+ GAL+E C+ LA+ AA AVDFPKTGK   +P +LKPK YPDFM K E  SYKS K+LG
Sbjct: 935  SEYGALDEKCIHLAELAATAVDFPKTGKIVSMPANLKPKLYPDFMGKEEYQSYKSRKILG 994

Query: 182  VLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHL 358
             LYR                 +D  DI     +D DLE  G   YI +AW  KC YD+ L
Sbjct: 995  RLYRHIKDVYDEDLSESSEINLDSPDIN----YDTDLEVTGSADYIDDAWVKKCSYDRQL 1050

Query: 359  RSLLGQYNVKREGEVVSGYV 418
              LLGQY VKRE EVV+G++
Sbjct: 1051 IGLLGQYKVKREEEVVTGHI 1070


>gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  124 bits (310), Expect = 2e-26
 Identities = 68/140 (48%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            SD GAL+ +CL+LA+ AA+AVDFPKTGK   LP HLKP+ YPDF+ K +  SYKS K+LG
Sbjct: 933  SDYGALDVNCLKLAELAALAVDFPKTGKIVSLPQHLKPRLYPDFLGKEDNQSYKSTKILG 992

Query: 182  VLYR-XXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHL 358
             LYR                   P DI     +D DLE  G   ++ +AW+ KC YD  L
Sbjct: 993  RLYRKVRDAYDEDAATSSELHYFPSDIP----YDMDLEVPGAADFVFDAWEKKCSYDGQL 1048

Query: 359  RSLLGQYNVKREGEVVSGYV 418
            + L+GQY VKRE E+V+G+V
Sbjct: 1049 KGLMGQYKVKREEEIVTGHV 1068


>ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago truncatula]
            gi|355492457|gb|AES73660.1| Rna-dependent RNA polymerase
            [Medicago truncatula]
          Length = 1188

 Score =  124 bits (310), Expect = 2e-26
 Identities = 68/139 (48%), Positives = 83/139 (59%)
 Frame = +2

Query: 2    SDEGALNEDCLELAKQAAIAVDFPKTGKPGILPHHLKPKQYPDFMEKGEALSYKSEKLLG 181
            SD GAL+E+C+ LA+ AA AVDFPKTGK   +P +LKPK YPDFM K    SYKS+K+LG
Sbjct: 920  SDYGALDENCVHLAELAATAVDFPKTGKLVTMPSNLKPKLYPDFMGKEHHQSYKSKKILG 979

Query: 182  VLYRXXXXXXXXXXXXXXXXVDPEDIAKKPCFDADLEFVGYDRYIAEAWKLKCGYDQHLR 361
             LYR                    DI     +D DLE  G   +IA+AW+ +C YD  L 
Sbjct: 980  RLYRRIKDAYDKDIDAPEFNCVSSDI----LYDTDLEVPGSSEFIADAWEQRCSYDGQLS 1035

Query: 362  SLLGQYNVKREGEVVSGYV 418
             LLGQY VK E EVV+G +
Sbjct: 1036 GLLGQYKVKTEEEVVTGQI 1054