BLASTX nr result

ID: Ephedra27_contig00004316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00004316
         (485 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25672.1| unknown [Picea sitchensis]                              56   6e-06

>gb|ABK25672.1| unknown [Picea sitchensis]
          Length = 425

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
 Frame = +2

Query: 116 SAISREI-LQTTFAKTRLSSTIPSTASRPWSRNTLSYNNGR-------RRCPVEVGIGVA 271
           +A+++++ L  TF     SS +  +    W    LS +  R       +R  V   + ++
Sbjct: 2   AAVTQQLALSGTFFTCSRSSKLCCSRPSQWQSQYLSLSQPRGKNQKKNKRRGVVCAVTIS 61

Query: 272 YDAVTKEREELMDEIHRRMDRIKENP-TGAPFTEEDVLAALDDPEFNTSENFEERYSVKG 448
            +A T+ERE LM+EI  R+ +I+ENP  G PF  E    +L +   N   N E   +VKG
Sbjct: 62  -NAKTRERESLMEEIEERLRKIRENPMEGVPFDLEQFSESLAN---NDGVNCEIGSTVKG 117

Query: 449 KIFYTDPDGAMV 484
            +F TD +GAMV
Sbjct: 118 MVFKTDANGAMV 129


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