BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00004276
         (3015 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854727.1| hypothetical protein AMTR_s00030p00239430 [A...   953   0.0  
ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containi...   899   0.0  
ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containi...   890   0.0  
ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containi...   890   0.0  
ref|XP_004960011.1| PREDICTED: pentatricopeptide repeat-containi...   888   0.0  
ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group] g...   887   0.0  
ref|XP_004308615.1| PREDICTED: pentatricopeptide repeat-containi...   885   0.0  
emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group] gi|125550...   884   0.0  
ref|XP_002515794.1| pentatricopeptide repeat-containing protein,...   884   0.0  
ref|XP_006485466.1| PREDICTED: pentatricopeptide repeat-containi...   883   0.0  
ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [S...   882   0.0  
gb|ESW17384.1| hypothetical protein PHAVU_007G234900g [Phaseolus...   881   0.0  
ref|XP_004514863.1| PREDICTED: pentatricopeptide repeat-containi...   881   0.0  
gb|EOY19266.1| Pentatricopeptide repeat-containing protein isofo...   880   0.0  
ref|XP_006653052.1| PREDICTED: pentatricopeptide repeat-containi...   880   0.0  
ref|XP_004250470.1| PREDICTED: pentatricopeptide repeat-containi...   880   0.0  
ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containi...   879   0.0  
emb|CBI25022.3| unnamed protein product [Vitis vinifera]              879   0.0  
ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containi...   877   0.0  
dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]    877   0.0  

>ref|XP_006854727.1| hypothetical protein AMTR_s00030p00239430 [Amborella trichopoda]
            gi|548858413|gb|ERN16194.1| hypothetical protein
            AMTR_s00030p00239430 [Amborella trichopoda]
          Length = 972

 Score =  953 bits (2463), Expect = 0.0
 Identities = 451/751 (60%), Positives = 585/751 (77%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +RE GKIFVGNLP++ KKNEIA++FRQFG VK +ILI+G  DSE+N GYCFV YGG    
Sbjct: 156  FREEGKIFVGNLPLWIKKNEIAEFFRQFGPVKNVILIKGHEDSERNMGYCFVIYGGPTAS 215

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                       DGVEF GR LT+R D+G+R K +   R RW+ G D    + RS WHEER
Sbjct: 216  NAATKAVEF--DGVEFHGRVLTVRLDDGRRNKAKSDERLRWVLGSDGK--EYRSKWHEER 271

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
                ++F+RIL++ PE+WQ V++ F +I KP+RR+F LMV +YA+RGDKHHAR+TFESMR
Sbjct: 272  EMLLKDFRRILDTEPENWQAVVSSFQRIKKPSRREFGLMVNYYAKRGDKHHARATFESMR 331

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEP+SYVYTNLV AYA AKDMRGAI C+EEMKAE +E+++ATYSILI+GFA++   +
Sbjct: 332  ARGIEPSSYVYTNLVHAYAVAKDMRGAIFCVEEMKAEGLEMSLATYSILIAGFASIGNAD 391

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
             AE WF+EAK+    +N ++Y NII AHC++GNM RAE +++EMEE G+ A  ++YH MM
Sbjct: 392  DAEKWFEEAKRTHTSLNAIVYCNIIYAHCQSGNMGRAEDMVKEMEEEGIDAPIDVYHSMM 451

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
            DGYTNV+DEAKCL V+QRLKE G  PSI+SYGCLI+LYTK+GK+SKAL+V   M+S+GI 
Sbjct: 452  DGYTNVRDEAKCLIVFQRLKECGFSPSIISYGCLINLYTKLGKVSKALEVSKTMESSGIV 511

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI G+V++NDCA+AFA+FE+M+KAG KPD++ YNII++ FC++G MDRA+ I
Sbjct: 512  HNSKTYSMLISGFVQLNDCASAFAIFEDMIKAGLKPDVILYNIIVNAFCKMGNMDRAIRI 571

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            +E+M+K + RPS +TFT I+YGFAK GD  +A++ ++ M+H G  P V T+N  I GLVQ
Sbjct: 572  IEEMKKARHRPSSRTFTPIIYGFAKVGDMKRAIETVDMMRHCGCIPTVETFNVLILGLVQ 631

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
             K+ ++A+ ++++M +AG+ PNE TYT IMQGYAS G+  KAFEYFT++K EGLKLD+ S
Sbjct: 632  KKQMEKAVAMIDEMSLAGLTPNEHTYTTIMQGYASLGETRKAFEYFTKIKEEGLKLDVFS 691

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LLKACCK+GRMQSALAVTKEMS+  I RN  +YNILIDGWARRGDVWEAADL+QQM 
Sbjct: 692  YEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLIQQMK 751

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            QEG++PDI+TYTSF+ ACSKAGDM RA    +EM +  +KPN+KTYT L++GWA A+ PE
Sbjct: 752  QEGVNPDIHTYTSFVHACSKAGDMQRAVQTVKEMEAVGVKPNIKTYTTLINGWARAALPE 811

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KAL CFE +K   +KPDKA+Y CLMTSLLSR  V  +Y++  IL+IS+EM E+G + D  
Sbjct: 812  KALRCFEEMKAAGLKPDKAVYHCLMTSLLSRATVLEDYLFTGILQISKEMVELGLTVDMG 871

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDW 2306
            T++HWS  L ++E   GELT A++K F P W
Sbjct: 872  TAVHWSRCLRKVERSGGELTEAIQKTFPPAW 902


>ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic [Vitis vinifera]
          Length = 929

 Score =  899 bits (2322), Expect = 0.0
 Identities = 425/760 (55%), Positives = 568/760 (74%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R+ GKIFVGNLP + KKNE++++FRQFG ++ +ILI+G ND+++NAG+ FV YGG    
Sbjct: 142  FRQEGKIFVGNLPNWVKKNEVSEFFRQFGPIENVILIKGHNDNQRNAGFGFVIYGGPMAS 201

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                       DGVEF GR LT++ D+G+RL+ R   RARW+ G     VD RS WHEER
Sbjct: 202  GSAMRAVEF--DGVEFHGRVLTVKLDDGRRLRGRSEERARWVQGH---GVDQRSKWHEER 256

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
              + ++F+++LE+ PE+WQ V+  F +I KP+R++F LMV +YARRGD HHAR TFESMR
Sbjct: 257  ESSRKDFRKVLETEPENWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMR 316

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEP S+VYT+L+ AYA  +DM  A++C+ +MK E IE+++ TYSIL+ GFA + +  
Sbjct: 317  ARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAE 376

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            AA+ WF+EAK+    +N +IY NII AHC+A NM +AE+L+REMEE G+ A  +IYH MM
Sbjct: 377  AADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMM 436

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
            DGYT + +E KCL V+ RLKE G  PS++SYGCLI+LY K+GK+SKAL+V   M+  GIK
Sbjct: 437  DGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIK 496

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G+V++ D ANAFAVFE+++K G KPD+V YN II  FC +G MDRA+  
Sbjct: 497  HNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRT 556

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            +++M+KE+ RP+ +TF  I++GFA++GD  +AL++ + M+  G  P V T+NA I GLV+
Sbjct: 557  VKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVE 616

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
              + ++A++++++M +AG+ PNE TYT IM GYAS GD GKAFEYFT++K EGL+LD+ +
Sbjct: 617  KCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYT 676

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LLKACCK+GRMQSALAVT+EMSS  I RN  +YNILIDGWARRGDVWEAA+LMQQM 
Sbjct: 677  YEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK 736

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            QEG+ PDI+TYTSFI+AC KAGDM RA    +EM    +KPN+KTYT L+HGWA AS PE
Sbjct: 737  QEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPE 796

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KAL CF+ +K   +KPDKA+Y CLMTSLLSR  V+  Y+Y  ++ I REM E   + D  
Sbjct: 797  KALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDMG 856

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWNMENNNLNS 2333
            T++HWS  L ++E   GELT AL+K F PDWN  N ++NS
Sbjct: 857  TAVHWSKCLRKIERTGGELTEALQKTFPPDWNSYNIHVNS 896


>ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Solanum tuberosum]
          Length = 944

 Score =  890 bits (2301), Expect = 0.0
 Identities = 424/760 (55%), Positives = 564/760 (74%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +RE+GK+F+GNLP++ KK E+ ++FRQFG +K +ILI+G +++E N G+ FV YGG    
Sbjct: 155  FREKGKVFIGNLPIWVKKKELTEFFRQFGPIKNVILIKGHHETEMNKGFGFVIYGGSTAE 214

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                       DGVEF GR LT++ D+G+R+K +   R RW+ GEDD  V+ RS WHEER
Sbjct: 215  KAAMKAVEF--DGVEFHGRVLTVKLDDGRRMKAKTEERRRWVEGEDD--VEYRSKWHEER 270

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
              +  EF+++L++ PE+WQ V+  F +I KP+R++F LMV +Y RRGD H AR TFE MR
Sbjct: 271  EGSRTEFRKVLDTEPENWQAVVQAFERIKKPSRKEFGLMVNYYGRRGDMHRARETFEKMR 330

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEP  +VYTNL+ AYA A+DM  A++C+  MK E IE+++ T+SIL+ GFA +    
Sbjct: 331  ARGIEPTVHVYTNLIHAYAVARDMEEALSCVRRMKDEGIEMSLVTHSILVDGFAKLGNIE 390

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            AAE WF+EAK+    +N +IY +II A+C+  NM+RAE L+REMEE G+ A  +IYH+MM
Sbjct: 391  AAEQWFKEAKERHPTLNAIIYGSIIYANCQTCNMDRAEELVREMEEEGIDAPIDIYHIMM 450

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
            DGYT++ +E KCL VY RLKE G  PS+VSYGCL++LY KVGK+SKA +V   MK  GIK
Sbjct: 451  DGYTSIGNEDKCLIVYDRLKECGFTPSVVSYGCLMNLYIKVGKVSKAFEVSEMMKLAGIK 510

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++ + D ANAFA+FE++++ G KPD+V YN II  FC +  +DRAV I
Sbjct: 511  HNMKTYSMLINGFINLKDWANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMDNIDRAVCI 570

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            +E+M+KE+ RP+ +TF  I++ FAKAG+  KALD+ + M+  G  P V T+NA I GL +
Sbjct: 571  VEEMKKERHRPTSRTFMPIIHAFAKAGEIRKALDVFDMMRRSGCIPTVQTFNALILGLAE 630

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
             ++ ++A++V+++ML+AG+ PNERTYT IM GYAS GD GKAFEYF+R+K+EGL+LDI +
Sbjct: 631  KRQMEKAVEVLDEMLLAGIRPNERTYTTIMDGYASLGDTGKAFEYFSRIKDEGLELDIYT 690

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LLKACCKAGRMQSALAVTKEMS+  I RN ++YNILIDGWARRGDVWEAADLMQQM 
Sbjct: 691  YEALLKACCKAGRMQSALAVTKEMSAKNIPRNTYVYNILIDGWARRGDVWEAADLMQQMR 750

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            QEG+ PDI+TYTSF++AC KAGDM +A     EM    +KPN+KTYT L+HGWA AS PE
Sbjct: 751  QEGVQPDIHTYTSFVNACCKAGDMQKATNTILEMKRVGVKPNVKTYTTLIHGWARASLPE 810

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KAL CFE +K + +KPDKA+Y CLMTSLLSR  V+  Y+ E I R+  EM E G + D  
Sbjct: 811  KALKCFEEMKRSGLKPDKAVYHCLMTSLLSRATVAEYYIIEGIHRVCEEMVESGLTVDMG 870

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWNMENNNLNS 2333
            T++HWS  L ++E   G+LT AL+K F PDWN  + NLN+
Sbjct: 871  TAVHWSRCLRKIERTGGDLTEALQKTFPPDWN-SHRNLNA 909


>ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  890 bits (2301), Expect = 0.0
 Identities = 424/760 (55%), Positives = 570/760 (75%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R+ GKIFVGNLP + KK+E+ ++FRQFG VK +ILI+G N  E+NAGY F+ Y G    
Sbjct: 163  FRQEGKIFVGNLPNWIKKHEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTAD 222

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                       DGVEF GR LT++ D+G+RLKE+   RARW+ G+D  +V+ RS WHEER
Sbjct: 223  KSAIKAVEF--DGVEFHGRVLTVKLDDGRRLKEKTDERARWMEGDD--SVEYRSHWHEER 278

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
             KA    ++++E+ PE+WQ V++ F +I KP+R+++ LMV +Y RRGD H AR TFE MR
Sbjct: 279  DKARNGLRKVIETEPENWQAVVSAFERIKKPSRKEYGLMVNYYTRRGDMHRARETFEKMR 338

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEP+S+VYTNL+ AYA  +DM  A++C+ +MK E IE+++ TYSIL+SGFA      
Sbjct: 339  ARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAE 398

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            +A+ WFQEAK+  + +N +IY NII A+C+  NM++AE+L+REMEE G+ A  +IYH MM
Sbjct: 399  SADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMM 458

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
            DGYT V DE KCL V++R KE G+ PS+++YGCLI+LY K+GK+SKAL+V  EM+  GIK
Sbjct: 459  DGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIK 518

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++K+ D ANAFA+FE+++K G KPD+V YN II  FC +G MDRAV  
Sbjct: 519  HNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCT 578

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            +++M+K++ +P+ +TF  I++GFA+ G+  KALD+ + M+  G  P V TYNA I GLV+
Sbjct: 579  VKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVE 638

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
             +K ++A Q++++M +AGV PNE TYT IM GYAS GD GKAF YFT++++EGL+LD+ +
Sbjct: 639  KRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYT 698

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LLKACCK+GRMQSALAVTKEMS+  I RN  IYNILIDGWARRGD+WEAADLMQQM 
Sbjct: 699  YEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMK 758

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            +EG+ PDI+TYTSFI+ACSKAGDM RA    EEM S  +KPN+KTYT L++GWA AS PE
Sbjct: 759  REGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPE 818

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KALSCFE +K + +KPD+A+Y CLMTSLLSR  V++  +Y  IL + REM +   + D  
Sbjct: 819  KALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMG 878

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWNMENNNLNS 2333
            T++HWS  L ++E   GE+T AL+K F P+WN+ NN L +
Sbjct: 879  TAVHWSKCLLKIERTGGEITEALQKTFPPNWNVYNNTLTN 918


>ref|XP_004960011.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like isoform X1 [Setaria italica]
            gi|514741919|ref|XP_004960012.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like isoform X2 [Setaria italica]
          Length = 893

 Score =  888 bits (2294), Expect = 0.0
 Identities = 419/756 (55%), Positives = 569/756 (75%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R++GK+FVGNLP++A+K EIA++FRQFG ++++ L+RG +D E+N G+CF+ YGG    
Sbjct: 110  FRQKGKVFVGNLPLWARKPEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGGDDPE 169

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                      VDGVEF G+ LT+R D+G++ + R   RARW+ G +    + RS WH+ R
Sbjct: 170  SAAERAVE--VDGVEFRGKSLTVRLDDGRKGRARAEERARWVEGGERR--EPRSPWHKGR 225

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
             +A  EF+R+LES PEDWQ V++ F +I KP+RR+F LMV +YA+RGDKHHAR+TFE+MR
Sbjct: 226  DEACREFRRVLESRPEDWQAVVSAFERIPKPSRREFGLMVVYYAKRGDKHHARATFENMR 285

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEPN++V+T+LV AYA A+DMRGA++CIEEMK+E +EL + TYSILI+G+A + +  
Sbjct: 286  ARGIEPNAFVFTSLVHAYAVARDMRGALSCIEEMKSEGLELTVVTYSILIAGYAKINDAQ 345

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            +A++ F+EAK     +N +IY NII+AHC++GNM+RAE L+REMEE G+ A  ++YH MM
Sbjct: 346  SADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMM 405

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
             GYT ++DE KCL V++RLKE G +PSI+SYGCLI+LY K+GK+ KAL +  EM+S GIK
Sbjct: 406  HGYTIIQDEKKCLIVFERLKECGFKPSIISYGCLINLYVKIGKVPKALTISKEMESYGIK 465

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++ ++D ANAF++FE+MLK+G +PD   YN++I  FC++G MDRA+ I
Sbjct: 466  HNNKTYSMLINGFIHLHDFANAFSIFEDMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRI 525

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
             E+M+KE+ +PS +TF  I+ GFA +GD  +ALD ++ M+  G  P V+TYNA IHGL++
Sbjct: 526  FEKMQKERMQPSNRTFRPIIEGFAVSGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIR 585

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
              + +RA+ V++ M IAG+ PNE TYT IM+GYA+ GDIGKAFEYFT++K  GLKLD+  
Sbjct: 586  KHQVERAVSVLDKMAIAGIAPNEHTYTIIMRGYAAGGDIGKAFEYFTKIKESGLKLDVYI 645

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LL+ACCK+GRMQSALAVT+EMS   I RN  IYNILIDGWARRGDVWEAADLM+QM 
Sbjct: 646  YETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMK 705

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            ++G+ P+I+TYTS+I+AC KAGDM RA    +EM    +KPN+KTYT L+ GWA  S P+
Sbjct: 706  EDGVPPNIHTYTSYINACCKAGDMRRAENVIQEMADVGLKPNVKTYTTLIKGWARVSLPD 765

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            +AL CFE +K   +KPD+A Y CL+TSLLSR  V     Y  IL + REM E   + D  
Sbjct: 766  RALKCFEEMKMAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILGVCREMFENDLTVDLR 825

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWNMENN 2321
            T++HWS  LH++E   G LT AL++IF PDWN   N
Sbjct: 826  TAVHWSKWLHKIERTGGALTEALQRIFPPDWNSSEN 861


>ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
            gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa
            Japonica Group]
          Length = 901

 Score =  887 bits (2293), Expect = 0.0
 Identities = 418/752 (55%), Positives = 568/752 (75%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R +GK+FVGNLP++A+K EIA++FRQFG ++++ L+RG +D E+N G+CF+ YGG    
Sbjct: 116  FRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGGDDAD 175

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                      VDGV+F GR LT+R D+G++ + R  +RARW+   D    + RS WHE R
Sbjct: 176  AAAERAVE--VDGVDFRGRSLTVRLDDGRKGRARAEQRARWVN--DGRRREPRSPWHEGR 231

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
             +A  EF+R++ES P++WQ V++ F +I KP+RR+F LM+ +YA+RGDKHHAR+TFE+MR
Sbjct: 232  DEACREFRRVVESRPDNWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMR 291

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEPN++V+T+LV AYA A+DMRGA++C+EEMK+E +EL I TYSILISGFA + +  
Sbjct: 292  ARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQ 351

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            +A++ F+EAK   + +N +IY NII+AHC++GNMERAE L+REMEE G+ A  ++YH MM
Sbjct: 352  SADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMM 411

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
             GYT +++E KCL V++RLKE G +PSI+SYGCL++LY K+GK++KAL +  EM+S GIK
Sbjct: 412  HGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIK 471

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++ ++D ANAFA+FEEML++G +PD   YN++I  FC++G MDRA+ I
Sbjct: 472  HNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICI 531

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            LE+M+KE+ +PS + F  I+ G+A AGD   ALD ++ M+  G  P V+TYNA IHGLV+
Sbjct: 532  LEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVR 591

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
              K  RA+ V++ M IAG+ PNE TYT IM+GYA++GDIGKAFEYFT++K  GLKLD+  
Sbjct: 592  KHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYI 651

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LL+ACCK+GRMQSALAVT+EMS   I RN  IYNILIDGWARRGDVWEA DLM+QM 
Sbjct: 652  YETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK 711

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            ++G+ P+I+TYTS+I+AC KAGDM RA    EEM+   +KPN+KTYT L+ GWA  S P+
Sbjct: 712  EDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPD 771

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            +AL CFE +K   +KPD+A Y CL+TSLLSR  V     Y  I+ + REM E   + D  
Sbjct: 772  RALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLR 831

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWN 2309
            T++HWS  LH++E   G LT AL++IF PDWN
Sbjct: 832  TAVHWSRWLHKIERTGGALTEALQRIFPPDWN 863


>ref|XP_004308615.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 924

 Score =  885 bits (2287), Expect = 0.0
 Identities = 419/755 (55%), Positives = 567/755 (75%), Gaps = 3/755 (0%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R+ GKIFVGNLP + KKNE++D+FRQFG +  +ILI+G + +E+NAG+ FV YGG    
Sbjct: 123  FRQEGKIFVGNLPNWIKKNELSDFFRQFGPITSVILIKGHDSTERNAGFGFVIYGGPNAA 182

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLT-GEDDSAVD--SRSSWH 404
                       DGVEF GR L++R D+G RLK+R   RARW+  G+ D  V+  +RS WH
Sbjct: 183  KSAMKAVEF--DGVEFHGRVLSVRLDDGGRLKDRAEERARWIEEGDGDGGVEFRARSKWH 240

Query: 405  EERSKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFE 584
            +ER  +    ++++E+ PE+WQ V+N F +IDKP+R ++ LMVK+YARRGD H AR TFE
Sbjct: 241  KERQSSRNALRKVMETAPENWQAVVNTFDRIDKPSRGEYGLMVKYYARRGDMHRARETFE 300

Query: 585  SMRAKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVI 764
            SMRA+GIEP S+VYT+L+ AYA  +DM  A++C+ +MK E +E+++ TYSI++ GFA V 
Sbjct: 301  SMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKDEGVEMSLVTYSIIVGGFAKVG 360

Query: 765  EPNAAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYH 944
               AA+ WF+EAK+    +N +IY NI+ AHC+  NM+RAE+L+REMEE G+ A  +IYH
Sbjct: 361  NAKAADDWFKEAKERHTTLNAIIYGNIVYAHCQTCNMDRAEALVREMEEAGIDAPIDIYH 420

Query: 945  VMMDGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSN 1124
             MMDGYT V DE KCL V++RLKE G  PSI+SYGCLI+LY KVGK+SKAL+V   M++ 
Sbjct: 421  TMMDGYTMVGDEDKCLIVFERLKECGFTPSIISYGCLINLYVKVGKVSKALEVSKRMETT 480

Query: 1125 GIKHSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRA 1304
            GIKH+  TYSMLI+G++K+ D ANAFAV E+++K G KPD+V YN II  FC +G M+RA
Sbjct: 481  GIKHNMKTYSMLINGFLKLKDWANAFAVIEDLMKDGLKPDVVLYNNIITAFCGMGNMNRA 540

Query: 1305 VGILEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHG 1484
            V  +++M+KE+ RP+ +TF  I++GFA+AGD  +AL++ + M+  G  P V T+NA + G
Sbjct: 541  VRTVKEMQKERHRPTSRTFMPIIHGFARAGDMRRALEIFDMMRMSGCIPTVHTFNALVLG 600

Query: 1485 LVQNKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLD 1664
            LV+ ++ D+A++++++M +AG+ PN+ TYT IM GYAS GD GKAFEYF++++N+GL++D
Sbjct: 601  LVEKRQMDKAVEILDEMTLAGICPNQHTYTTIMNGYASLGDTGKAFEYFSKLRNDGLEID 660

Query: 1665 ILSYAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQ 1844
            + +Y  LLKACCKAG+MQSALAVTKEMS+  I RN  +YNIL+DGWARRGDVWEAADLMQ
Sbjct: 661  VFTYEALLKACCKAGKMQSALAVTKEMSAQKIPRNTFVYNILVDGWARRGDVWEAADLMQ 720

Query: 1845 QMHQEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALAS 2024
            QM +EG+ PDI++YTSFI+AC KAGDM RAA   +EM +  +KPN+KTYT L+HGWA AS
Sbjct: 721  QMKREGVQPDIHSYTSFINACCKAGDMQRAAKTIDEMKTFGVKPNIKTYTTLIHGWARAS 780

Query: 2025 QPEKALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSA 2204
             PEKAL CF+ +K   +KPDKA+Y CLMTSLLSR  V+  Y+Y  +L I +EM E G + 
Sbjct: 781  LPEKALRCFKDMKLAGLKPDKAVYHCLMTSLLSRATVAEAYIYSGLLSICKEMIESGLTV 840

Query: 2205 DTETSLHWSNALHRLEVVPGELTHALRKIFSPDWN 2309
            D  T++HWS  L ++E   GELT AL+K F PDWN
Sbjct: 841  DMGTAVHWSRCLCKIERSGGELTEALQKTFPPDWN 875


>emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group] gi|125550286|gb|EAY96108.1|
            hypothetical protein OsI_17985 [Oryza sativa Indica
            Group]
          Length = 900

 Score =  884 bits (2285), Expect = 0.0
 Identities = 417/752 (55%), Positives = 567/752 (75%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R +GK+FVGNLP++A+K EIA++FRQFG ++++ L+RG +D E+N G+CF+ YGG    
Sbjct: 115  FRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGGDDAD 174

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                      VDGV+F GR LT+R D+G++ + R  +RARW+   D    + RS WHE R
Sbjct: 175  AAAERAVE--VDGVDFRGRSLTVRLDDGRKGRARAEQRARWVN--DGRRREPRSPWHEGR 230

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
             +A  EF+R++ES P++WQ V++ F +I KP+RR+F LM+ +YA+RGDKHHAR+TFE+MR
Sbjct: 231  DEACREFRRVVESRPDNWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMR 290

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEPN++V+T+LV AYA A+DMRGA++C+EEMK+E +EL I TYSILISGFA + +  
Sbjct: 291  ARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQ 350

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            +A++ F+EAK   + +N +IY NII+AHC++GNMERAE L+ EMEE G+ A  ++YH MM
Sbjct: 351  SADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMM 410

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
             GYT +++E KCL V++RLKE G +PSI+SYGCL++LY K+GK++KAL +  EM+S GIK
Sbjct: 411  HGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIK 470

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++ ++D ANAFA+FEEML++G +PD   YN++I  FC++G MDRA+ I
Sbjct: 471  HNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICI 530

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            LE+M+KE+ +PS + F  I+ G+A AGD   ALD ++ M+  G  P V+TYNA IHGLV+
Sbjct: 531  LEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVR 590

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
              K  RA+ V++ M IAG+ PNE TYT IM+GYA++GDIGKAFEYFT++K  GLKLD+  
Sbjct: 591  KHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYI 650

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LL+ACCK+GRMQSALAVT+EMS   I RN  IYNILIDGWARRGDVWEA DLM+QM 
Sbjct: 651  YETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK 710

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            ++G+ P+I+TYTS+I+AC KAGDM RA    EEM+   +KPN+KTYT L+ GWA  S P+
Sbjct: 711  EDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPD 770

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            +AL CFE +K   +KPD+A Y CL+TSLLSR  V     Y  I+ + REM E   + D  
Sbjct: 771  RALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLR 830

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWN 2309
            T++HWS  LH++E   G LT AL++IF PDWN
Sbjct: 831  TAVHWSRWLHKIERTGGALTEALQRIFPPDWN 862


>ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545122|gb|EEF46633.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 924

 Score =  884 bits (2283), Expect = 0.0
 Identities = 421/756 (55%), Positives = 570/756 (75%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R+ GKIF+GNLP + KK+EI+++FRQFG +K++ILI+G N++E+NAG+ FV Y      
Sbjct: 158  FRQEGKIFIGNLPNWIKKHEISEFFRQFGPIKKVILIKGYNETERNAGFGFVIYDDKTAE 217

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                       DG+EF GR LT++ D+G+RLK +   R RW+ GED    D  S WHEER
Sbjct: 218  KSATKAVEF--DGMEFHGRILTVKLDDGRRLKAKADERKRWVEGEDGD--DYESKWHEER 273

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
              + + F+R+LE+ PE+WQ+V++ F +I KP+RR++ LMV +YARRGD H AR TFESMR
Sbjct: 274  DGSRKAFRRVLETQPENWQDVVSAFERIKKPSRREYGLMVSYYARRGDMHRARQTFESMR 333

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEP S+VYT+L+ AYA  +DM  A++C  +MK E +E+++ TYSI++ GFA +   +
Sbjct: 334  ARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNAD 393

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            AA+ WF+EAK   + +N +IY N+I A+C+  NM++AE+L+REME  G+ A  +IYH MM
Sbjct: 394  AADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMM 453

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
            DGYT V +E KCLTV++RLKE G  PS+VSYGCLI+LY KVGK+SKAL+V   M+S GIK
Sbjct: 454  DGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIK 513

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++K+ D ANAFA+FE+++K G KPD+V YN II  FC +G MDRA+ +
Sbjct: 514  HNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICM 573

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            +++M+KE+ RP+ +TF  I++GFA+AG+  +ALD+ + M+  G  P V T+NA I GLV+
Sbjct: 574  VKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVE 633

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
             ++ ++AI+++++M +AGV PNE TYT IM GYA+ GD GKAFEYFT++++EGL+LD+ +
Sbjct: 634  KRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYT 693

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LLKACCK+GRMQSALAVTKEMS+  I RN  +YNILIDGWARRGDVWEAADLMQQM 
Sbjct: 694  YEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK 753

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            Q G+ PDI+TYTSFI+AC KAGDM RA+   EEM +S +KPN+KTYT L+HGWA AS PE
Sbjct: 754  QGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPE 813

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KAL CF+ +K   +KPDKA+Y CLMT+LLSR  V+  YV   IL I +EM E G   D  
Sbjct: 814  KALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAYVRPGILSICKEMIESGLIVDMG 873

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWNMENN 2321
            T++HWS +L ++E   GELT AL+K F PDWNM ++
Sbjct: 874  TAVHWSKSLRKIERTGGELTEALQKTFPPDWNMRHS 909


>ref|XP_006485466.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Citrus sinensis]
          Length = 948

 Score =  883 bits (2282), Expect = 0.0
 Identities = 424/752 (56%), Positives = 563/752 (74%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R+ GKIFVGNLP + KK+++ ++FRQFG +K +ILI+G N+ EKN G+ FV Y G    
Sbjct: 148  FRQEGKIFVGNLPNWIKKHQVMEFFRQFGPIKNVILIKGYNNFEKNVGFGFVIYDGPAAE 207

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                       DGVEF GR LT++ D+G+RLK R   RARW+ G +    + RS+WH+ER
Sbjct: 208  KSAMKAVEF--DGVEFHGRVLTVKLDDGRRLKNRAEVRARWVAGNNGE--EFRSTWHKER 263

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
                 EF++ +E+ PE+WQ V++ F +I KP+RR+F LMV +YARRGD H AR TFE+MR
Sbjct: 264  EWHRREFRKAVETQPENWQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMR 323

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEP  +VYTNL+ AYA  +DM  A++C+ +MK E IE+++ TYSI++ GFA +    
Sbjct: 324  ARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAE 383

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            AA+ WF+EAK+  A +N +IY NII A C+  NMERAE+L+R+MEE G+ A  +IYH+MM
Sbjct: 384  AADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMM 443

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
            DGYT + +E KCL V++RLKE G  PSI+SYGCLI+LYTK+GK+SKAL V   MKS+GIK
Sbjct: 444  DGYTIIGNEEKCLIVFERLKECGFTPSIISYGCLINLYTKIGKVSKALDVSKVMKSSGIK 503

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++K+ D ANAFAVFE++++ G KPD+V YN II  FC +G MDRA+ I
Sbjct: 504  HNMKTYSMLINGFLKLKDWANAFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHI 563

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            +++M+KE+ RP+ +TF  I++GFA+AG+  +AL++ + M+  G  P V T+NA I GLV+
Sbjct: 564  VKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFHMMRRSGCIPTVHTFNALILGLVE 623

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
             ++ ++AI+++++M +AG+ PNE TYT IM GYAS GD GKAFEYFT+++NEGL+LD+ +
Sbjct: 624  KRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFT 683

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LLKACCK+GRMQSALAVTKEMS+  I RN  +YNILIDGWARRGDVWEAADLMQQM 
Sbjct: 684  YEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMK 743

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            QEG+ PD++TYTSFI+ACSKAGDM  AA A  EM    +KPN+KTYT L+ GWA AS PE
Sbjct: 744  QEGVQPDVHTYTSFINACSKAGDMQSAAKAIREMEEVGVKPNVKTYTTLIKGWARASLPE 803

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KAL CF  +K T +KPDKA+Y C+MTSLLSR  V+ +Y Y   L ISREM E G + D  
Sbjct: 804  KALKCFSDMKLTGLKPDKAVYHCVMTSLLSRATVAESY-YTGALSISREMMESGLTVDMG 862

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWN 2309
            T++HWS  L ++E   GELT AL+K F PDW+
Sbjct: 863  TAVHWSRCLRKIERTGGELTEALQKTFPPDWS 894


>ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
            gi|241938535|gb|EES11680.1| hypothetical protein
            SORBIDRAFT_06g033480 [Sorghum bicolor]
          Length = 888

 Score =  882 bits (2278), Expect = 0.0
 Identities = 415/756 (54%), Positives = 565/756 (74%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R++GK+FVGNLP++A+K +IA++FRQFG ++++ L+RG +D E+N G+CF+ YGG    
Sbjct: 105  FRQKGKVFVGNLPLWARKPDIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGGDDPE 164

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                      VDGVEF G+ LT+R D+G++ + R   RARW+  E   A ++RS WH+ R
Sbjct: 165  AAAARAVE--VDGVEFRGKSLTVRLDDGRKGRARAEERARWV--EAGVAREARSPWHKGR 220

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
              A  EF+R+LES PEDWQ V++ F +I KP+RR+F LMV +YA+RGDKHHAR+TFE+MR
Sbjct: 221  EDACREFRRVLESRPEDWQAVVSAFERIPKPSRREFGLMVVYYAKRGDKHHARATFENMR 280

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEPN++V+T+LV AYA A+DMRGA++C+EEMK+E +E+ + TYSILI+G+    +  
Sbjct: 281  ARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAE 340

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            +A+  F+EAK     +N +IY NII+AHC++GNM+RAE L+REMEE G+ A  ++YH MM
Sbjct: 341  SADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMM 400

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
             GYT  +DE KCL V++RLKE G  PSI+SYGCLI+LY K+GK+ KAL V  EM+S+GIK
Sbjct: 401  HGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIK 460

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++ ++D ANAF++FE+M+K+G +PD   YN+++  FC++G MDRA+ I
Sbjct: 461  HNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRI 520

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
             E+M+KE+ +PS +TF  I+ GFA AGD  +ALD ++ M+  G  P V+TYNA IHGL++
Sbjct: 521  FERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIR 580

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
              + +RA+ V++ M IAG+ PNE TYT IM+GYA++GDIGKAFEYFT++K  GLKLD+  
Sbjct: 581  KHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYI 640

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LL+ACCK+GRMQSALAVT+EMS   I RN  IYNILIDGWARRGDVWEAADLM+QM 
Sbjct: 641  YETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMK 700

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            ++GI P+I+T+TS+I+AC KAGDM RA    +EM    +KPN+KT+T L+ GWA  S P+
Sbjct: 701  EDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPD 760

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            +AL CFE +K   +KPD+A Y CL+TSLLSR  V     Y  IL + REM E   + D  
Sbjct: 761  RALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCREMFENDLTVDLR 820

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWNMENN 2321
            T++HWS  LH +E   G LT AL++IF PDWN   N
Sbjct: 821  TAVHWSKWLHEIERTGGALTEALQRIFPPDWNSSEN 856


>gb|ESW17384.1| hypothetical protein PHAVU_007G234900g [Phaseolus vulgaris]
          Length = 897

 Score =  881 bits (2277), Expect = 0.0
 Identities = 417/755 (55%), Positives = 562/755 (74%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R+ GKIFVGNLP + KK  +A++FRQFGA++ +I+I+G ++ E+NAG+ FV Y G    
Sbjct: 117  FRQPGKIFVGNLPAWVKKPLVAEFFRQFGAIRSVIVIKGHHEMERNAGFAFVIYDGEDEV 176

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                       DGVEF GR LT++ D+GKR++E+   RARWL G  +   +  SSWHEER
Sbjct: 177  ADKAAMRAVEFDGVEFHGRVLTVKLDDGKRMREKSQERARWLEGNGNKG-EHPSSWHEER 235

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
              + + F+++LE+ PE+WQ V+  F KI KP R+++ LMVK+YARRGD HHAR TFESMR
Sbjct: 236  DGSRKGFQKVLETQPENWQAVVTAFEKIKKPARKEYGLMVKYYARRGDMHHARQTFESMR 295

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEP+S+VY++L+ AYA  +DM  A+ C+ +MK E IE+ I TYSI++ GFA +   +
Sbjct: 296  ARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIVVGGFARMANAD 355

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            AA+ WF+EAK+    +N +IY +II AHC+  NM+RAE+L+REMEE G+ A  +IYH MM
Sbjct: 356  AADHWFKEAKEMLPSLNAVIYGSIIYAHCQTCNMDRAEALVREMEEQGIDAPIDIYHTMM 415

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
            DGYT + +E KCL V++RLKE G  PS+VSYGCLI+LYTK+GK+SKAL++   MK +GI+
Sbjct: 416  DGYTMIGNEQKCLIVFERLKECGFSPSVVSYGCLINLYTKIGKVSKALEISKIMKMSGIE 475

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++K+ D ANAF++FE+  K G KPD+V YN I+  FC +G MDRA+ +
Sbjct: 476  HNMKTYSMLINGFLKLKDWANAFSIFEDFTKDGLKPDVVLYNNIVTAFCGMGNMDRAIQM 535

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            ++QM+KE+ RP+ +TF  I++ FA+AG+  +AL++ + M+  G  P V TYNA I GLV+
Sbjct: 536  VKQMQKERHRPTTRTFLPIIHSFARAGEMRRALEVFDMMRRSGCIPTVHTYNALILGLVE 595

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
              +  +A+ ++++M +AG+ PNE TYT +MQGYAS GD  KAF+YFT ++NEGL++D+ +
Sbjct: 596  KCQMAKAVAILDEMNLAGIRPNEHTYTTLMQGYASVGDTEKAFQYFTALRNEGLEIDVYT 655

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LLKACCKAGRMQSALAVTKEMS+  I RN  +YNILIDGWARRGDVWEAADLMQQM 
Sbjct: 656  YEALLKACCKAGRMQSALAVTKEMSAKKIPRNTFVYNILIDGWARRGDVWEAADLMQQMR 715

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            +EG+ PDI+TYTSFI+AC KAGDM +A    +EM +S IKPNLKTYT L++GWA AS PE
Sbjct: 716  KEGVRPDIHTYTSFINACCKAGDMQKATEIIQEMEASDIKPNLKTYTTLINGWARASMPE 775

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KALSCFE +K   +KPDKA+Y CL+TSLLSR   + +YVY ++L I REM E   + D  
Sbjct: 776  KALSCFEEMKLAGLKPDKAVYHCLVTSLLSRATFAQSYVYSAMLSICREMVESEMTIDMG 835

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWNMEN 2318
            T++HWS  L ++E   GELT AL+K F PDW   N
Sbjct: 836  TAVHWSRYLRKIERTGGELTEALQKTFPPDWTSHN 870


>ref|XP_004514863.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Cicer arietinum]
          Length = 947

 Score =  881 bits (2276), Expect = 0.0
 Identities = 414/755 (54%), Positives = 568/755 (75%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R+ GKIFVGNLP + KK+E++++FRQFG +K +ILIRG ND+E+NAG+ FV Y G    
Sbjct: 150  FRQPGKIFVGNLPGWVKKHEVSEFFRQFGPIKNVILIRGHNDTERNAGFGFVIYEGETAD 209

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                       DGVEF GR LT++ D+GKR KE+ + R +WL G D+   + RS+WHEER
Sbjct: 210  NSAMKAVEF--DGVEFHGRVLTVKLDDGKRWKEKTVEREKWLRGNDEK--EYRSTWHEER 265

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
              + +EF+++LE+ PE+WQ V+  F +I KP R+++ LM+K+YARRGD HHAR TFESMR
Sbjct: 266  DGSRKEFQKVLETEPENWQAVVRSFERIKKPARKEYGLMIKYYARRGDMHHARQTFESMR 325

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEP+S+VY++L+ AY   +DM  A+ C+++MK E IE++I TYSI++ G+A V   +
Sbjct: 326  ARGIEPSSHVYSSLIHAYVVGRDMEEALHCVKKMKEEGIEMSIVTYSIIVGGYAKVGNAD 385

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            AA++WF+EAK+    +N +IY +II AHC+  NM RAE+L+REMEE G+ A  +IYH MM
Sbjct: 386  AADNWFKEAKERLPSLNAVIYGSIIYAHCQTCNMGRAEALVREMEEQGIDAPIDIYHTMM 445

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
            DGYT + +E KCL V++RLKE G  PS+VSYGCLI+LYTK+GK+SKAL++   MK+ GIK
Sbjct: 446  DGYTMIGNEEKCLIVFERLKECGFSPSVVSYGCLINLYTKIGKVSKALEISRVMKTVGIK 505

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSML +G++K+ D ANAF++FE++ K G KPD++ YN I+  FC +G MDRA+ I
Sbjct: 506  HNLKTYSMLFNGFMKLKDWANAFSIFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICI 565

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            ++QM++E+ + + +T+  I++GFA+AG+  +AL++ ++M+  G  P V TYNA I GLV+
Sbjct: 566  VKQMQRERHKATTRTYLPIIHGFARAGETGRALEIFDKMRRSGCIPTVHTYNALILGLVE 625

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
             ++ ++A++++++M +AGV P+E TYT +MQGYAS GD GKAF+YFT +KN GL++D+ +
Sbjct: 626  KRQMEKAVRILDEMNLAGVSPDEHTYTTLMQGYASLGDTGKAFQYFTILKNNGLEIDVYT 685

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LLKACCK+GRMQSALAVTKEMS+  I RN  +YNILIDGWARRGDVWEAADLMQQM 
Sbjct: 686  YEALLKACCKSGRMQSALAVTKEMSARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMR 745

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            +EG+ PDI+TYTSFI+AC KAGDM  A    EEM +  IKPNLKTYT L+HGWA A+ PE
Sbjct: 746  KEGVQPDIHTYTSFINACCKAGDMQNATQIIEEMEARGIKPNLKTYTTLIHGWARAAFPE 805

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KAL CFE +K   +KPD+A+Y CLMTSLLSR  ++ +Y+Y  +L I REM E   + D  
Sbjct: 806  KALRCFEEMKVAGLKPDRAVYHCLMTSLLSRATIAQSYIYSGLLSICREMVESEMTVDMG 865

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWNMEN 2318
            T++HWS  L ++E   GELT AL+K F PDW   N
Sbjct: 866  TAVHWSRCLRKIERTGGELTEALQKTFPPDWISHN 900



 Score =  103 bits (257), Expect = 5e-19
 Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 6/260 (2%)
 Frame = +3

Query: 504  PTRRDFALMVKFYARRGDKHHARSTFESMRAKGIEPNSYVYTNLVLAYASAKDMRGAIAC 683
            P    +  +++ YA  GD   A   F  ++  G+E + Y Y  L+ A   +  M+ A+A 
Sbjct: 646  PDEHTYTTLMQGYASLGDTGKAFQYFTILKNNGLEIDVYTYEALLKACCKSGRMQSALAV 705

Query: 684  IEEMKAENIELNIATYSILISGFANVIEPNAAESWFQEAKKHCAPVNLMIYKNIINAHCK 863
             +EM A  I  N   Y+ILI G+A   +   A    Q+ +K     ++  Y + INA CK
Sbjct: 706  TKEMSARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVQPDIHTYTSFINACCK 765

Query: 864  AGNMERAESLIREMEEHGMQATPEIYHVMMDGYTNVKDEAKCLTVYQRLKESGMEPSIVS 1043
            AG+M+ A  +I EME  G++   + Y  ++ G+       K L  ++ +K +G++P    
Sbjct: 766  AGDMQNATQIIEEMEARGIKPNLKTYTTLIHGWARAAFPEKALRCFEEMKVAGLKPDRAV 825

Query: 1044 YGCLIHLYTKVGKLSKA------LQVCSEMKSNGIKHSRHTYSMLIDGYVKINDCANAFA 1205
            Y CL+        ++++      L +C EM  + +     T         KI        
Sbjct: 826  YHCLMTSLLSRATIAQSYIYSGLLSICREMVESEMTVDMGTAVHWSRCLRKIERTGGELT 885

Query: 1206 VFEEMLKAGFKPDIVSYNII 1265
               E L+  F PD +S+NI+
Sbjct: 886  ---EALQKTFPPDWISHNIL 902


>gb|EOY19266.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
            cacao]
          Length = 944

 Score =  880 bits (2275), Expect = 0.0
 Identities = 411/752 (54%), Positives = 557/752 (74%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R+ GKIF+GNLP + +K+E+A++FRQFG +K++ILI+  N+  +NAG+ FV YGG    
Sbjct: 145  FRQDGKIFIGNLPNWIRKHEVAEFFRQFGPIKDVILIKAHNEIHRNAGFGFVIYGGPPPL 204

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                       DGVEF GR LT++ D+GKRL E+   RARW+ G      +++S WH+ER
Sbjct: 205  AEKSAMKAVEFDGVEFHGRILTVKLDDGKRLMEKAEERARWVEGYQVQDCNNKSKWHQER 264

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
              + + F++ILES PE+WQ V+  F +I KP RR+F LMV +YARRGD H AR TFE MR
Sbjct: 265  EGSRKLFRKILESEPENWQKVVTAFERITKPARREFGLMVNYYARRGDMHRARETFERMR 324

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEP S+VYTNL+ AYA  +DM  A++C+ +MK E IE+ + TYSIL+ GFA +    
Sbjct: 325  ARGIEPTSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMTLVTYSILVGGFAKIGNSE 384

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            AA+ WF+EAK+   P+N +IY NII AHC+  NMERAE+L+REMEE G+ A  +IYH MM
Sbjct: 385  AADHWFKEAKERHTPLNAIIYGNIIYAHCQTCNMERAEALVREMEEEGIDAPIDIYHTMM 444

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
            DGYT + +E KCL V++RLKE G  PS++SYGCLI+LY+K+GK+SKAL+V   M+ +GIK
Sbjct: 445  DGYTMIGNEEKCLIVFERLKECGFIPSVISYGCLINLYSKIGKVSKALEVSKMMECDGIK 504

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++K+ D ANAFA+FE++++ G KPD+V YN II  FC +G MDRA+  
Sbjct: 505  HNMKTYSMLINGFLKLKDWANAFAIFEDLVEDGLKPDVVLYNNIIRAFCGMGNMDRAIHT 564

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            +++M KE+ RP+ +TF  I++ FA+AG+  +A ++ + M+  G +P V T+NA I GL +
Sbjct: 565  VKEMLKERHRPTTRTFMPIIHAFARAGEMRRAWEVFDVMRRSGCSPTVHTFNALILGLTE 624

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
             ++ ++A++++++M +AG+ PNE TYT IM GYAS GD  KAF YFT+++NEGL++D+ +
Sbjct: 625  KRQMEKAVEILDEMTLAGISPNEHTYTTIMHGYASLGDTAKAFGYFTKLRNEGLEIDVYT 684

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LLKACCK+GRMQSALAVTKEMS+  I RN  +YNIL+DGWARRGDVWEAADLMQQM 
Sbjct: 685  YEALLKACCKSGRMQSALAVTKEMSARKIPRNTFVYNILVDGWARRGDVWEAADLMQQMK 744

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            QEG+ PDI+TYTSFI+AC KAGDM RA    +EM +  +KPN+KTYT L+HGWA AS PE
Sbjct: 745  QEGVQPDIHTYTSFINACCKAGDMLRAMKTIQEMDAIGVKPNVKTYTTLIHGWARASLPE 804

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KAL CFE +K   +KPDKA+Y CLMTSLLSR   +  Y+Y  +L + REM + G + D  
Sbjct: 805  KALKCFEEMKLAGLKPDKAVYHCLMTSLLSRATFAEAYIYSGVLSVCREMIDSGLTVDMG 864

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWN 2309
            T++HWS  L ++E   GELT AL+K F PDW+
Sbjct: 865  TAVHWSRCLRKIERTGGELTEALQKTFPPDWS 896


>ref|XP_006653052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Oryza brachyantha]
          Length = 901

 Score =  880 bits (2273), Expect = 0.0
 Identities = 417/752 (55%), Positives = 566/752 (75%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R +GK+FVGNLP++A+K EIA++FRQFG ++++ L+RG +D E+N G+CF+ YGG    
Sbjct: 116  FRHKGKVFVGNLPLWARKVEIAEFFRQFGPLEKVELVRGHDDPERNLGFCFLYYGGDDAE 175

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                      VDGV+F GR LT+R D+G++ + R  +R RW+  +D    ++RS WHE R
Sbjct: 176  AAAERAVE--VDGVDFRGRSLTVRLDDGRKGRARAEQRERWV--DDGRRREARSPWHESR 231

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
             +A  +F+R++ES P++WQ V++ F KI KP+RR+F LM+ +YA+RGDKHHAR+TFE+MR
Sbjct: 232  DEACRDFRRVVESRPDNWQAVVSAFEKIPKPSRREFGLMIVYYAKRGDKHHARATFENMR 291

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEPN++V+T+LV AYA A+DMRGA++CIEEMK+E +EL I TYSILISGFA + +  
Sbjct: 292  ARGIEPNAFVFTSLVHAYAVARDMRGALSCIEEMKSEGLELTIVTYSILISGFAKINDAQ 351

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            +A++ F+EAK     +N +IY NII+AHC++GNMERAE L+REMEE G+ A  ++YH MM
Sbjct: 352  SADNLFKEAKTKFGSLNGIIYGNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMM 411

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
             GYT +++E KCL V++RLKE G +PSI+SYGCL++LY K GK++KAL    EM+S+GIK
Sbjct: 412  HGYTIIQNEKKCLMVFERLKECGFKPSIISYGCLVNLYVKTGKVAKALSTSKEMESHGIK 471

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++ ++D ANAFA+FEEM+++G +PD   YN++I  FC++G MDRA+ I
Sbjct: 472  HNNKTYSMLINGFIHLHDFANAFAIFEEMIRSGLQPDRTIYNLLIEAFCKMGNMDRAICI 531

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            LE+M+KE+ + S + F  I+ GFA AGD   ALD ++ M+  G  P V+TYNA IHGLV+
Sbjct: 532  LEKMQKERMQLSNRAFRPIIEGFAVAGDMKSALDTLDLMRRSGSAPTVMTYNALIHGLVR 591

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
              + +RAI V++ M IAG+ PNE TYT IM+GYA+ GD+GKAFEYFT++K  GLKLD+  
Sbjct: 592  KHQVERAISVLDKMSIAGITPNEHTYTIIMRGYAANGDVGKAFEYFTKIKEAGLKLDVYI 651

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LL+ACCK+GRMQSALAVT+EMS   I RN +IYNILIDGWARRGDVWEA DLM+QM 
Sbjct: 652  YETLLRACCKSGRMQSALAVTREMSFQKIPRNTYIYNILIDGWARRGDVWEAEDLMKQMK 711

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
             +G+ P+I+TYTS+I+AC KAGDM RA    EEM+   +KPN+KTYT L+ GWA  S P+
Sbjct: 712  DDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVGVGLKPNVKTYTTLIKGWARVSLPD 771

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KAL CFE +K   ++PD+A Y CL+TSLLSR  V     Y  IL + REM E   + D  
Sbjct: 772  KALKCFEEMKLAGLQPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCREMCENDLTVDLR 831

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWN 2309
            T++HWS  LH++E   G LT AL++IF PDWN
Sbjct: 832  TAVHWSRWLHKIERTGGALTEALQRIFPPDWN 863


>ref|XP_004250470.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Solanum lycopersicum]
          Length = 932

 Score =  880 bits (2273), Expect = 0.0
 Identities = 418/756 (55%), Positives = 557/756 (73%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +RE+GK+F+GNLP++ KK E+ ++FRQFG +K +ILI+G +++E N G+ FV YGG    
Sbjct: 144  FREKGKVFIGNLPIWVKKKELTEFFRQFGPIKNVILIKGHHETEMNKGFGFVIYGGSTAE 203

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                       DGVEF GR LT++ D+G+R+K +   R RW+ GEDD  V+ RS WHEER
Sbjct: 204  KAAMKAVEF--DGVEFHGRVLTVKLDDGRRMKAKTEERRRWVEGEDD--VEYRSKWHEER 259

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
              +   F+++L++ PE+WQ V+  F +I KP+R++F LMV +Y RRGD H AR TFE MR
Sbjct: 260  EGSRNSFRKVLDTEPENWQAVVQAFERIKKPSRKEFGLMVNYYGRRGDMHRARETFEKMR 319

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEP  +VYTNL+ AYA A+DM  A++C+  MK E IE+++ T+SIL+ GFA +    
Sbjct: 320  ARGIEPTVHVYTNLIHAYAVARDMEEALSCVRRMKDEGIEMSLVTHSILVDGFAKLGNIE 379

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            AAE  F+EAK+    +N +IY +II A+C+  NM+RAE L+REMEE G+ A  +IYH+MM
Sbjct: 380  AAEQCFKEAKERYLTLNAIIYGSIIYANCQTCNMDRAEELVREMEEEGIDAPIDIYHIMM 439

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
            DGYT++ +E KCL ++ RLKE G  PS+VSYGCL++L+ KVGK+SKA +V   MK  GIK
Sbjct: 440  DGYTSIGNEDKCLILFDRLKECGFTPSVVSYGCLMNLFIKVGKVSKAFEVSEMMKLAGIK 499

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G++ + D ANAFA+FE++++ G KPD+V YN II  FC +G ++RAV I
Sbjct: 500  HNMKTYSMLINGFINLKDWANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNIERAVRI 559

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            +E+M+KE+ RP+ +TF  I++ FAKAG+  KALD+ + M+  G  P V T+NA I GLV+
Sbjct: 560  VEEMKKERHRPTSRTFMPIIHAFAKAGEIRKALDVFDMMRRSGCIPTVQTFNALILGLVE 619

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
              + ++A+QV+++ML+AG+ PNERTYT IM GYAS GD GKAFEYF+R+K+EGL+LDI +
Sbjct: 620  KLQMEKAVQVLDEMLLAGIRPNERTYTTIMDGYASLGDTGKAFEYFSRIKDEGLELDIYT 679

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LLKACCKAGRMQSALAVTKEMS+  I RN ++YNILIDGWARRGDVWEAADLMQQM 
Sbjct: 680  YEALLKACCKAGRMQSALAVTKEMSAKNIPRNTYVYNILIDGWARRGDVWEAADLMQQMR 739

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            QEG+ PDI+TYTSF++AC KAGDM +A     EM    +KPN+KTYT L+HGWA AS PE
Sbjct: 740  QEGVQPDIHTYTSFVNACCKAGDMQKATNTILEMKRIGVKPNVKTYTTLIHGWARASLPE 799

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KAL CFE +K + +KPDKA+Y CLMTSLLSR  V+  Y+ E I  +  EM E G + D  
Sbjct: 800  KALKCFEEMKRSGLKPDKAVYHCLMTSLLSRATVAEYYIIEGIHHVCEEMVESGLTVDMG 859

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWNMENN 2321
            T++HWS  L ++E   G LT AL+K F PDWN   N
Sbjct: 860  TAVHWSRCLRKIERTGGNLTEALQKTFPPDWNSHRN 895


>ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Brachypodium distachyon]
          Length = 904

 Score =  879 bits (2270), Expect = 0.0
 Identities = 415/752 (55%), Positives = 562/752 (74%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R++GK+FVGNLP+ A+K E+A++FRQFG + ++ L+R  +D E+NAG+CF+ Y G    
Sbjct: 119  FRQKGKVFVGNLPLRARKPEVAEFFRQFGPLDKVELVRAHDDPERNAGFCFLYYAGDAAE 178

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                      VDGV+F GR LT+R D+G++ + R   RARW+  +     ++RS WH+ R
Sbjct: 179  AEAAAGRAAEVDGVDFRGRSLTVRLDDGRKGRARAEERARWV--DHGRRPEARSPWHQGR 236

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
             +A  EF+R++ES PEDWQ V++ F +I KP+RR+F LM+ +YA+RGDKHHAR+TFE+MR
Sbjct: 237  EEACREFRRVVESRPEDWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMR 296

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEPN++V+T+LV AYA A+DMRG ++C+EEMKAE IEL I TYSI+I+GFA + +  
Sbjct: 297  ARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQ 356

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            +A++ F+EAK     +N +IY NII+AHC++GNM+RAE L+REMEE G+ A  + YH MM
Sbjct: 357  SADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMM 416

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
             GYT ++DE KCL V++RLKE    PSI+SYGCLI+LY K+GK++KA+ +  EM+S GIK
Sbjct: 417  HGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIK 476

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI G++ ++D ANAF++FEEMLK+G +PD   YN++I  FC++G MDRA+ I
Sbjct: 477  HNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRI 536

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            LE+M+KE+ +PS + F  I+ GFA AGD  +AL++++ M+  G  P V+TYNA IHGL++
Sbjct: 537  LEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIK 596

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
              + +RA+ V+  M IAG+ PNE TYT IM+GYA+ GDIGKAFEYFT++K  GLKLD+  
Sbjct: 597  KNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYI 656

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LL+ACCK+GRMQSALAVT+EMS+  I RN  +YNILIDGWARRGDVWEAADLM+QM 
Sbjct: 657  YETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMK 716

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            ++G+ P+I+TYTS+I+AC KAGDM RA    EEM    +KPNLKTYT L+ GWA AS P+
Sbjct: 717  EDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPD 776

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            +AL  FE +K   +KPD+A Y CL+TSLLSR  V     Y  IL I REM E   + D  
Sbjct: 777  RALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSICREMFENDLTVDMR 836

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWN 2309
            T++HWS  LH++E   G LT AL++IF PDWN
Sbjct: 837  TAVHWSRWLHKIERTGGALTEALQRIFPPDWN 868


>emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  879 bits (2270), Expect = 0.0
 Identities = 417/760 (54%), Positives = 560/760 (73%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R+ GKIFVGNLP + KKNE++++FRQFG ++ +ILI+G ND+++NAG+ F         
Sbjct: 143  FRQEGKIFVGNLPNWVKKNEVSEFFRQFGPIENVILIKGHNDNQRNAGFGF--------- 193

Query: 234  XXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHEER 413
                           F GR LT++ D+G+RL+ R   RARW+ G     VD RS WHEER
Sbjct: 194  ---------------FHGRVLTVKLDDGRRLRGRSEERARWVQGH---GVDQRSKWHEER 235

Query: 414  SKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFESMR 593
              + ++F+++LE+ PE+WQ V+  F +I KP+R++F LMV +YARRGD HHAR TFESMR
Sbjct: 236  ESSRKDFRKVLETEPENWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMR 295

Query: 594  AKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIEPN 773
            A+GIEP S+VYT+L+ AYA  +DM  A++C+ +MK E IE+++ TYSIL+ GFA + +  
Sbjct: 296  ARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAE 355

Query: 774  AAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHVMM 953
            AA+ WF+EAK+    +N +IY NII AHC+A NM +AE+L+REMEE G+ A  +IYH MM
Sbjct: 356  AADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMM 415

Query: 954  DGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNGIK 1133
            DGYT + +E KCL V+ RLKE G  PS++SYGCLI+LY K+GK+SKAL+V   M+  GIK
Sbjct: 416  DGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIK 475

Query: 1134 HSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAVGI 1313
            H+  TYSMLI+G+V++ D ANAFAVFE+++K G KPD+V YN II  FC +G MDRA+  
Sbjct: 476  HNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRT 535

Query: 1314 LEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGLVQ 1493
            +++M+KE+ RP+ +TF  I++GFA++GD  +AL++ + M+  G  P V T+NA I GLV+
Sbjct: 536  VKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVE 595

Query: 1494 NKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDILS 1673
              + ++A++++++M +AG+ PNE TYT IM GYAS GD GKAFEYFT++K EGL+LD+ +
Sbjct: 596  KCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYT 655

Query: 1674 YAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQMH 1853
            Y  LLKACCK+GRMQSALAVT+EMSS  I RN  +YNILIDGWARRGDVWEAA+LMQQM 
Sbjct: 656  YEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK 715

Query: 1854 QEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQPE 2033
            QEG+ PDI+TYTSFI+AC KAGDM RA    +EM    +KPN+KTYT L+HGWA AS PE
Sbjct: 716  QEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPE 775

Query: 2034 KALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSADTE 2213
            KAL CF+ +K   +KPDKA+Y CLMTSLLSR  V+  Y+Y  ++ I REM E   + D  
Sbjct: 776  KALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDMG 835

Query: 2214 TSLHWSNALHRLEVVPGELTHALRKIFSPDWNMENNNLNS 2333
            T++HWS  L ++E   GELT AL+K F PDWN  N ++NS
Sbjct: 836  TAVHWSKCLRKIERTGGELTEALQKTFPPDWNSYNIHVNS 875


>ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 932

 Score =  877 bits (2267), Expect = 0.0
 Identities = 418/757 (55%), Positives = 558/757 (73%), Gaps = 2/757 (0%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYGGXXXX 233
            +R+ GKIFVGNLP + KK ++A++FRQFG ++ +ILI+G +D+E++AG+ FV Y G    
Sbjct: 130  FRQPGKIFVGNLPAWVKKPQVAEFFRQFGPIRSVILIKGHHDTERSAGFAFVIYDGVESD 189

Query: 234  XXXXXXXXXXV--DGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWHE 407
                      V  DGVEF GR LT++ D+GKR++ER   +ARWL G      +  S+WHE
Sbjct: 190  DEADKAAMRAVEFDGVEFHGRVLTVKLDDGKRMRERSEEKARWLQGNGGDKGEYPSTWHE 249

Query: 408  ERSKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFES 587
            ER  + + F++ILE+ PE+WQ V+  F +I KP R+++ LMVK+Y RRGD HHAR TFES
Sbjct: 250  ERDGSRKSFQKILETQPENWQAVVTAFERIKKPARKEYGLMVKYYGRRGDMHHARQTFES 309

Query: 588  MRAKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVIE 767
            MRA+GIEP+S+VY++L+ AYA  +DM  A+ C+ +MK E IE+ I TYSI++ GFA +  
Sbjct: 310  MRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGN 369

Query: 768  PNAAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYHV 947
             +AA+ WF+EAK+    +N +IY  II AHC+  NM+RAE+L+REMEE G+ A  +IYH 
Sbjct: 370  ADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHT 429

Query: 948  MMDGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSNG 1127
            MMDGYT + +E KCL V+ RLKE G  PS++SYGCLI+LYTKVGK+SKAL++   MK +G
Sbjct: 430  MMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSG 489

Query: 1128 IKHSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRAV 1307
            IKH+  TYSMLI+G++K+ D ANAF+VFE+  K G KPD+V YN II  FC +G MDRA+
Sbjct: 490  IKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAI 549

Query: 1308 GILEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHGL 1487
             ++ QM+KE+ RP+ +TF  I++GFA+AG+  +AL++ + M+  G  P V TYNA I GL
Sbjct: 550  CMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGL 609

Query: 1488 VQNKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLDI 1667
            V+ ++  +A+ ++++M +AGV PNE TYT +MQGYAS GD  KAF+YFT ++NEGL++D+
Sbjct: 610  VEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDV 669

Query: 1668 LSYAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQQ 1847
             +Y  LLK+CCK+GRMQSALAVTKEMS+  I RN  +YNILIDGWARRGDVWEAADLMQQ
Sbjct: 670  YTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQ 729

Query: 1848 MHQEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALASQ 2027
            M +EG+ PDI+TYTSFI+AC KAGDM +A    +EM +S IKPNLKTYT L++GWA AS 
Sbjct: 730  MRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASM 789

Query: 2028 PEKALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSAD 2207
            PEKALSCFE +K    KPDKA+Y CL+TSLLSR   + +YVY  +L + REM E     D
Sbjct: 790  PEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQSYVYSGLLSVCREMIESEMIVD 849

Query: 2208 TETSLHWSNALHRLEVVPGELTHALRKIFSPDWNMEN 2318
              T++HWS  L ++E   GELT AL+K F PDW   N
Sbjct: 850  MGTAVHWSRCLRKIERTGGELTEALQKTFPPDWTSHN 886


>dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 913

 Score =  877 bits (2267), Expect = 0.0
 Identities = 417/755 (55%), Positives = 559/755 (74%), Gaps = 3/755 (0%)
 Frame = +3

Query: 54   YRERGKIFVGNLPVFAKKNEIADYFRQFGAVKELILIRGQNDSEKNAGYCFVTYG---GX 224
            +R +GK+FVGNLP+ A+K E+AD+FRQFG + ++ L+R  +D E+NAG+CF+ Y      
Sbjct: 124  FRHKGKVFVGNLPLRARKAEVADFFRQFGPLDKVELVRAHDDPERNAGFCFLYYADADAE 183

Query: 225  XXXXXXXXXXXXXVDGVEFSGRKLTIRPDNGKRLKERFLRRARWLTGEDDSAVDSRSSWH 404
                         VDGV+F GR LT+R D+G++ K R   RARW+  +     ++ S WH
Sbjct: 184  GQGAEAAAERAAEVDGVDFRGRSLTVRLDDGRKAKARAEDRARWV--DHGQGKEAPSPWH 241

Query: 405  EERSKASEEFKRILESHPEDWQNVINVFLKIDKPTRRDFALMVKFYARRGDKHHARSTFE 584
              R +A  EF+R++ES PEDWQ V++ F +I KP+RR+F LM+ +YA+RGDKHHAR+TFE
Sbjct: 242  HGRDEACREFRRVVESRPEDWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFE 301

Query: 585  SMRAKGIEPNSYVYTNLVLAYASAKDMRGAIACIEEMKAENIELNIATYSILISGFANVI 764
            +MRA+GIEPN++V+T+LV AYA A+DMRGA++C EEMKAE IEL I TYSILISGF  + 
Sbjct: 302  NMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKIN 361

Query: 765  EPNAAESWFQEAKKHCAPVNLMIYKNIINAHCKAGNMERAESLIREMEEHGMQATPEIYH 944
            +  +A++ F+EAK +   +N +IY NII+AHC++GNM+RAE L+ EMEE G+ A  + YH
Sbjct: 362  DTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYH 421

Query: 945  VMMDGYTNVKDEAKCLTVYQRLKESGMEPSIVSYGCLIHLYTKVGKLSKALQVCSEMKSN 1124
             MM GYT ++DE KCL V++RLKE    PSI+SYGCLI+LY K+GK++KA+ +  EM+S+
Sbjct: 422  SMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESS 481

Query: 1125 GIKHSRHTYSMLIDGYVKINDCANAFAVFEEMLKAGFKPDIVSYNIIIHGFCRIGMMDRA 1304
            GIKH+  TYSMLI G++ ++D  NAF +FEEMLK+G +PD   YN++I  FC++G MDRA
Sbjct: 482  GIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRA 541

Query: 1305 VGILEQMRKEKKRPSPQTFTTIMYGFAKAGDWVKALDMINQMKHYGLTPNVVTYNAFIHG 1484
            + ILE+M+KE+ +PS + F  I+ GFA AGD  +ALD+++ M+  G  P V+TYNA IHG
Sbjct: 542  IRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHG 601

Query: 1485 LVQNKKTDRAIQVVEDMLIAGVIPNERTYTAIMQGYASTGDIGKAFEYFTRMKNEGLKLD 1664
            L++  + +RA+ V+  M IAG+ PNE TYT IM+GYA+TGDI KAFEYFT++K  GLKLD
Sbjct: 602  LIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLD 661

Query: 1665 ILSYAELLKACCKAGRMQSALAVTKEMSSSGIQRNAHIYNILIDGWARRGDVWEAADLMQ 1844
            +  Y  LL+ACCK+GRMQSALAVT+EMSS  I RN  +YNILIDGWARRGDVWEAADLM+
Sbjct: 662  VYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMK 721

Query: 1845 QMHQEGISPDIYTYTSFISACSKAGDMDRAATAFEEMISSKIKPNLKTYTALLHGWALAS 2024
            QM ++G+ P+I+TYTS+I+AC KAGDM RA T  +EM    +KPNLKTYT L+ GWA AS
Sbjct: 722  QMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARAS 781

Query: 2025 QPEKALSCFELLKETKIKPDKAIYRCLMTSLLSRTVVSNNYVYESILRISREMEEIGFSA 2204
             P++AL CFE +K   +KPD+A Y CL+TSLLSR  V     Y  IL + REM E   + 
Sbjct: 782  LPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCREMFENDLTV 841

Query: 2205 DTETSLHWSNALHRLEVVPGELTHALRKIFSPDWN 2309
            D  T++HWS  LH++E+  G LT AL++IF PDWN
Sbjct: 842  DMRTAVHWSRWLHKIEMTGGALTEALQRIFPPDWN 876