BLASTX nr result

ID: Ephedra27_contig00004132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00004132
         (358 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC13992.1| putative MADS-domain transcription factor GGM16 ...   137   2e-30
gb|AAF18377.1|AF158544_1 MADS-box transcription factor [Picea ab...   120   2e-25
gb|AAF18376.1|AF158543_1 MADS-box transcription factor [Picea ab...   120   2e-25
gb|AAF18372.1|AF158539_1 MADS-box transcription factor [Picea ab...   118   9e-25
gb|AAF18373.1|AF158540_1 MADS-box transcription factor [Picea ab...   118   9e-25
dbj|BAG48500.1| B-class MADS-box transcription factor [Cryptomer...   115   6e-24
dbj|BAG48501.1| B-class MADS-box transcription factor [Cryptomer...   114   2e-23
dbj|BAD93173.1| MADS-box transcription factor GbMADS9 [Ginkgo bi...   112   4e-23
gb|AAF28863.1|AF120097_1 DEF/GLO-like protein [Pinus radiata]         110   3e-22
sp|Q9XGJ4.1|GGM13_GNEGN RecName: Full=MADS-box protein GGM13 gi|...   107   2e-21
ref|XP_006339359.1| PREDICTED: agamous-like MADS-box protein AGL...   106   3e-21
ref|XP_006339358.1| PREDICTED: agamous-like MADS-box protein AGL...   106   3e-21
ref|NP_001234194.1| TAGL11 transcription factor [Solanum lycoper...   106   3e-21
ref|XP_006843513.1| hypothetical protein AMTR_s00053p00228660 [A...   106   4e-21
dbj|BAD93174.1| MADS-box transcription factor GbMADS10 [Ginkgo b...   106   4e-21
gb|AGV28074.1| Bsister-like protein, partial [Welwitschia mirabi...   105   6e-21
gb|ABD77426.1| MADS-box protein 9 [Petunia x hybrida]                 105   6e-21
gb|AAQ72497.1| MADS-box protein 9 [Petunia x hybrida] gi|1644517...   105   6e-21
gb|AGK89797.1| B-sister MADS-box transcription factor [Taxus bac...   104   1e-20
ref|XP_001776709.1| MIKCC MADS-domain protein PPMC6 [Physcomitre...   104   1e-20

>emb|CAC13992.1| putative MADS-domain transcription factor GGM16 [Gnetum gnemon]
          Length = 211

 Score =  137 bits (344), Expect = 2e-30
 Identities = 64/85 (75%), Positives = 78/85 (91%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIK IENP++RQVTFSKRRGGL+KKAREL+VLC+AE+ALI+FS+TGKLT+W S 
Sbjct: 1   MGRGKIEIKKIENPSSRQVTFSKRRGGLIKKARELAVLCDAEIALIIFSSTGKLTDWCSH 60

Query: 76  NMKDTLKKFEAVSGIVSSDYQRQQL 2
           NMKDTLKKFE ++G  S++Y+R QL
Sbjct: 61  NMKDTLKKFERIAGSSSAEYERHQL 85


>gb|AAF18377.1|AF158544_1 MADS-box transcription factor [Picea abies]
          Length = 219

 Score =  120 bits (300), Expect = 2e-25
 Identities = 61/86 (70%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIKMIENP NRQVTFSKRRGGL KKA+ELSVLC AEVALIVFS TGKL +W+S 
Sbjct: 1   MGRGKIEIKMIENPTNRQVTFSKRRGGLTKKAQELSVLCNAEVALIVFSNTGKLHQWSSS 60

Query: 76  NMKDTLKKFE-AVSGIVSSDYQRQQL 2
           +MK  L++++ +  G+   DYQ QQL
Sbjct: 61  SMKKVLERYQKSEQGLGLMDYQHQQL 86


>gb|AAF18376.1|AF158543_1 MADS-box transcription factor [Picea abies]
          Length = 215

 Score =  120 bits (300), Expect = 2e-25
 Identities = 61/86 (70%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIKMIENP NRQVTFSKRRGGL KKA+ELSVLC AEVALIVFS TGKL +W+S 
Sbjct: 1   MGRGKIEIKMIENPTNRQVTFSKRRGGLTKKAQELSVLCNAEVALIVFSNTGKLHQWSSS 60

Query: 76  NMKDTLKKFE-AVSGIVSSDYQRQQL 2
           +MK  L++++ +  G+   DYQ QQL
Sbjct: 61  SMKKVLERYQKSEQGLGLMDYQHQQL 86


>gb|AAF18372.1|AF158539_1 MADS-box transcription factor [Picea abies]
          Length = 220

 Score =  118 bits (295), Expect = 9e-25
 Identities = 61/85 (71%), Positives = 72/85 (84%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIKMIEN +NR+VTFSKRRGGL KKARELSVLCEAEVALIVFS+TG   E+AS 
Sbjct: 1   MGRGKIEIKMIENESNRKVTFSKRRGGLFKKARELSVLCEAEVALIVFSSTGNHQEFASS 60

Query: 76  NMKDTLKKFEAVSGIVSSDYQRQQL 2
           +MK+ L++++A +GI   DYQ Q L
Sbjct: 61  SMKNILERYKASTGIGLLDYQDQML 85


>gb|AAF18373.1|AF158540_1 MADS-box transcription factor [Picea abies]
          Length = 220

 Score =  118 bits (295), Expect = 9e-25
 Identities = 61/85 (71%), Positives = 72/85 (84%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIKMIEN +NR+VTFSKRRGGL KKARELSVLCEAEVALIVFS+TG   E+AS 
Sbjct: 1   MGRGKIEIKMIENESNRKVTFSKRRGGLFKKARELSVLCEAEVALIVFSSTGNHQEFASS 60

Query: 76  NMKDTLKKFEAVSGIVSSDYQRQQL 2
           +MK+ L++++A +GI   DYQ Q L
Sbjct: 61  SMKNILERYKASTGIGLLDYQDQML 85


>dbj|BAG48500.1| B-class MADS-box transcription factor [Cryptomeria japonica]
          Length = 229

 Score =  115 bits (288), Expect = 6e-24
 Identities = 58/85 (68%), Positives = 71/85 (83%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIK IEN +NRQVTFSKR+GGL KKA ELSVLC+AEVALI+FS+TGKL E+AS 
Sbjct: 1   MGRGKIEIKRIENVSNRQVTFSKRKGGLRKKAHELSVLCDAEVALIIFSSTGKLIEYASS 60

Query: 76  NMKDTLKKFEAVSGIVSSDYQRQQL 2
           +MK  L+++  VSG    DY++QQ+
Sbjct: 61  SMKKILERYVTVSGARVWDYEQQQM 85


>dbj|BAG48501.1| B-class MADS-box transcription factor [Cryptomeria japonica]
          Length = 229

 Score =  114 bits (284), Expect = 2e-23
 Identities = 58/85 (68%), Positives = 69/85 (81%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIK IEN  NRQVTFSKR+GGL KKA ELSVLC+AEVALIVFS+TGKL E++S 
Sbjct: 1   MGRGKIEIKKIENITNRQVTFSKRKGGLRKKAHELSVLCDAEVALIVFSSTGKLVEYSSS 60

Query: 76  NMKDTLKKFEAVSGIVSSDYQRQQL 2
           +MK  L+++  VSG    DY R+Q+
Sbjct: 61  SMKKVLQRYVTVSGARLWDYDRKQM 85


>dbj|BAD93173.1| MADS-box transcription factor GbMADS9 [Ginkgo biloba]
          Length = 227

 Score =  112 bits (281), Expect = 4e-23
 Identities = 58/85 (68%), Positives = 68/85 (80%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIK IEN  NRQVTF+KRRGGLLKKA ELSVLC AEVALI+FS TGKL E++S 
Sbjct: 1   MGRGKIEIKRIENAANRQVTFAKRRGGLLKKAHELSVLCAAEVALIIFSGTGKLFEYSSS 60

Query: 76  NMKDTLKKFEAVSGIVSSDYQRQQL 2
           +MK  L+++E +SG    DY+ Q L
Sbjct: 61  SMKTILERYERLSGARLWDYEHQNL 85


>gb|AAF28863.1|AF120097_1 DEF/GLO-like protein [Pinus radiata]
          Length = 220

 Score =  110 bits (274), Expect = 3e-22
 Identities = 60/94 (63%), Positives = 71/94 (75%), Gaps = 9/94 (9%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIKMIEN  NRQVTFSKRRGGL KKA+ELSVLC AEVALI+FS+TGKL EW+S 
Sbjct: 1   MGRGKIEIKMIENATNRQVTFSKRRGGLKKKAQELSVLCNAEVALIIFSSTGKLHEWSSS 60

Query: 76  --------NMKDTLKKFE-AVSGIVSSDYQRQQL 2
                   +MK  L++++ +  G+   DYQ QQL
Sbjct: 61  SSFFMLQKSMKKILERYQKSEQGLGLMDYQHQQL 94


>sp|Q9XGJ4.1|GGM13_GNEGN RecName: Full=MADS-box protein GGM13 gi|5019464|emb|CAB44459.1|
           putative MADS domain transcription factor GGM13 [Gnetum
           gnemon]
          Length = 237

 Score =  107 bits (267), Expect = 2e-21
 Identities = 55/87 (63%), Positives = 69/87 (79%), Gaps = 2/87 (2%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEW--A 83
           MGRGKIEIK IEN  NRQVTFSKRRGGLLKKA ELSVLC+AE+ LI+FS++GKL E+  A
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60

Query: 82  SDNMKDTLKKFEAVSGIVSSDYQRQQL 2
           S +MK  +++++ VSG   ++Y  Q L
Sbjct: 61  SSSMKKIIERYQKVSGARITEYDNQHL 87


>ref|XP_006339359.1| PREDICTED: agamous-like MADS-box protein AGL11-like isoform X2
           [Solanum tuberosum]
          Length = 226

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/85 (62%), Positives = 68/85 (80%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIK IEN  NRQVTF KRR GLLKKA ELSVLC+AE+ALIVFST G+L E++++
Sbjct: 1   MGRGKIEIKRIENNTNRQVTFCKRRNGLLKKAYELSVLCDAEIALIVFSTRGRLYEYSNN 60

Query: 76  NMKDTLKKFEAVSGIVSSDYQRQQL 2
           N+K T+++++  +   SS Y  Q+L
Sbjct: 61  NVKATIERYKKATAETSSAYTTQEL 85


>ref|XP_006339358.1| PREDICTED: agamous-like MADS-box protein AGL11-like isoform X1
           [Solanum tuberosum]
          Length = 232

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/85 (62%), Positives = 68/85 (80%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIK IEN  NRQVTF KRR GLLKKA ELSVLC+AE+ALIVFST G+L E++++
Sbjct: 1   MGRGKIEIKRIENNTNRQVTFCKRRNGLLKKAYELSVLCDAEIALIVFSTRGRLYEYSNN 60

Query: 76  NMKDTLKKFEAVSGIVSSDYQRQQL 2
           N+K T+++++  +   SS Y  Q+L
Sbjct: 61  NVKATIERYKKATAETSSAYTTQEL 85


>ref|NP_001234194.1| TAGL11 transcription factor [Solanum lycopersicum]
           gi|24967137|gb|AAM33102.2| TAGL11 transcription factor
           [Solanum lycopersicum]
          Length = 223

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/85 (62%), Positives = 68/85 (80%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIK IEN  NRQVTF KRR GLLKKA ELSVLC+AE+ALIVFST G+L E++++
Sbjct: 1   MGRGKIEIKRIENNTNRQVTFCKRRNGLLKKAYELSVLCDAEIALIVFSTRGRLYEYSNN 60

Query: 76  NMKDTLKKFEAVSGIVSSDYQRQQL 2
           N+K T+++++  +   SS Y  Q+L
Sbjct: 61  NVKATIERYKKATAETSSAYTTQEL 85


>ref|XP_006843513.1| hypothetical protein AMTR_s00053p00228660 [Amborella trichopoda]
           gi|548845880|gb|ERN05188.1| hypothetical protein
           AMTR_s00053p00228660 [Amborella trichopoda]
          Length = 188

 Score =  106 bits (264), Expect = 4e-21
 Identities = 55/90 (61%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIK IEN  +RQVTFSKRR GLLKKA+ELS+LC+AEVALI+FS+TGKL E+ S 
Sbjct: 1   MGRGKIEIKKIENATSRQVTFSKRRAGLLKKAQELSILCDAEVALIIFSSTGKLFEFPSS 60

Query: 76  NMKDTLKKF-----EAVSGIVSSDYQRQQL 2
            MK TL ++      + S +V  D++ QQ+
Sbjct: 61  GMKKTLARYNQCSDSSESSLVECDFEMQQV 90


>dbj|BAD93174.1| MADS-box transcription factor GbMADS10 [Ginkgo biloba]
          Length = 229

 Score =  106 bits (264), Expect = 4e-21
 Identities = 54/87 (62%), Positives = 69/87 (79%), Gaps = 2/87 (2%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEW--A 83
           MGRGKIEIK IEN  NRQVTFSKRRGGLLKKA ELSVLC+AE+ LI+FS+TGKL E+  A
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSTGKLFEYSSA 60

Query: 82  SDNMKDTLKKFEAVSGIVSSDYQRQQL 2
           + +M+  +++++ VSG   S++  Q L
Sbjct: 61  TSSMRKIIERYQKVSGARLSEFDNQHL 87


>gb|AGV28074.1| Bsister-like protein, partial [Welwitschia mirabilis]
          Length = 229

 Score =  105 bits (262), Expect = 6e-21
 Identities = 54/85 (63%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEW--A 83
           MGRGKIEIK IEN  NRQVTFSKRRGGLLKKA ELS LC+AE+ LI+FS++GKL E+  A
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSFLCDAELGLIIFSSSGKLFEYSSA 60

Query: 82  SDNMKDTLKKFEAVSGIVSSDYQRQ 8
           S +MK  +++++ VSG   +DY  Q
Sbjct: 61  SSSMKKIIERYQKVSGARITDYDNQ 85


>gb|ABD77426.1| MADS-box protein 9 [Petunia x hybrida]
          Length = 269

 Score =  105 bits (262), Expect = 6e-21
 Identities = 51/69 (73%), Positives = 62/69 (89%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKI+IK+IEN NNRQVTFSKRR GLLKKA ELSVLC+AEVA+I+FS+TGKL E++S 
Sbjct: 1   MGRGKIDIKLIENVNNRQVTFSKRRAGLLKKANELSVLCDAEVAVIIFSSTGKLFEFSST 60

Query: 76  NMKDTLKKF 50
           +MK TL ++
Sbjct: 61  SMKQTLSRY 69


>gb|AAQ72497.1| MADS-box protein 9 [Petunia x hybrida] gi|164451774|gb|ABY56804.1|
           MADS-box protein 9 [Petunia x hybrida]
          Length = 269

 Score =  105 bits (262), Expect = 6e-21
 Identities = 51/69 (73%), Positives = 62/69 (89%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKI+IK+IEN NNRQVTFSKRR GLLKKA ELSVLC+AEVA+I+FS+TGKL E++S 
Sbjct: 1   MGRGKIDIKLIENVNNRQVTFSKRRAGLLKKANELSVLCDAEVAVIIFSSTGKLFEFSST 60

Query: 76  NMKDTLKKF 50
           +MK TL ++
Sbjct: 61  SMKQTLSRY 69


>gb|AGK89797.1| B-sister MADS-box transcription factor [Taxus baccata]
          Length = 279

 Score =  104 bits (260), Expect = 1e-20
 Identities = 53/87 (60%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEW--A 83
           MGRGKIEIK IEN  NRQVTFSKRRGGL+KKA ELSVLC+AE+ LI+FS TGKL E+  A
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFSKRRGGLMKKAHELSVLCDAELGLIIFSNTGKLFEYATA 60

Query: 82  SDNMKDTLKKFEAVSGIVSSDYQRQQL 2
           + +MK  +++++  SG    ++  QQL
Sbjct: 61  TSSMKKIIERYQKASGARLCEFDNQQL 87


>ref|XP_001776709.1| MIKCC MADS-domain protein PPMC6 [Physcomitrella patens]
           gi|162672001|gb|EDQ58545.1| MIKCC MADS-domain protein
           PPMC6 [Physcomitrella patens]
          Length = 284

 Score =  104 bits (259), Expect = 1e-20
 Identities = 54/80 (67%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
 Frame = -1

Query: 256 MGRGKIEIKMIENPNNRQVTFSKRRGGLLKKARELSVLCEAEVALIVFSTTGKLTEWASD 77
           MGRGKIEIK IENP +RQVTFSKRRGGLLKKA EL+VLC+AEVALI+FS+TGKL E+AS 
Sbjct: 1   MGRGKIEIKKIENPTSRQVTFSKRRGGLLKKAHELAVLCDAEVALIIFSSTGKLFEFASS 60

Query: 76  -NMKDTLKKFEAVSGIVSSD 20
            +M+D L+++      V +D
Sbjct: 61  GSMRDILERYSKCPDGVQTD 80


Top