BLASTX nr result
ID: Ephedra27_contig00003884
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00003884
(655 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16107.1| unknown [Picea sitchensis] gi|224285605|gb|ACN405... 266 4e-69
gb|ABR17668.1| unknown [Picea sitchensis] 261 1e-67
gb|ABK24684.1| unknown [Picea sitchensis] 256 4e-66
ref|XP_006852315.1| hypothetical protein AMTR_s00049p00200350 [A... 244 2e-62
emb|CBI39777.3| unnamed protein product [Vitis vinifera] 241 2e-61
ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop... 241 2e-61
gb|EXC21514.1| Heterogeneous nuclear ribonucleoprotein 27C [Moru... 239 4e-61
gb|EOY11959.1| RNA-binding family protein [Theobroma cacao] 239 4e-61
ref|XP_006474836.1| PREDICTED: heterogeneous nuclear ribonucleop... 239 7e-61
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ... 238 1e-60
ref|NP_683559.2| RNA recognition motif-containing protein [Arabi... 237 2e-60
ref|XP_006407249.1| hypothetical protein EUTSA_v10021050mg [Eutr... 236 3e-60
ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-bindin... 236 6e-60
emb|CBI18525.3| unnamed protein product [Vitis vinifera] 234 2e-59
ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homol... 234 2e-59
gb|ESW22924.1| hypothetical protein PHAVU_004G006700g [Phaseolus... 234 2e-59
gb|EMJ16735.1| hypothetical protein PRUPE_ppa007179mg [Prunus pe... 233 3e-59
gb|EOY02507.1| RNA-binding family protein isoform 1 [Theobroma c... 233 4e-59
ref|XP_002300392.2| hypothetical protein POPTR_0001s37920g [Popu... 232 8e-59
ref|XP_006298001.1| hypothetical protein CARUB_v10014046mg [Caps... 231 1e-58
>gb|ABR16107.1| unknown [Picea sitchensis] gi|224285605|gb|ACN40521.1| unknown
[Picea sitchensis] gi|224285970|gb|ACN40697.1| unknown
[Picea sitchensis]
Length = 371
Score = 266 bits (680), Expect = 4e-69
Identities = 130/195 (66%), Positives = 157/195 (80%), Gaps = 3/195 (1%)
Frame = +2
Query: 80 QNPKNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGF 259
Q KN+ + +D SPGKIFIGGLS+ETSS+ F YF +YG++ DSVIMKD+ TG+PRGF
Sbjct: 36 QEQKNNGASRDT-SSPGKIFIGGLSRETSSATFTKYFSKYGELTDSVIMKDRATGNPRGF 94
Query: 260 GFVTYSDPSVIDKVLKDKHVLDGKTVEIKRTIPK---APKGGKTKKIFVGGIPTSITADQ 430
GFVTY+DPSV+DKV+KDKH +DGK VEIKRTIP+ A KG KTKKIFVGGIPTSIT D+
Sbjct: 95 GFVTYADPSVVDKVIKDKHFIDGKMVEIKRTIPRGNAATKGPKTKKIFVGGIPTSITEDE 154
Query: 431 LKDFFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKR 610
KD+FSKFGK+++ QIMQ TG SRGFGFVTFDSE+ V+++LS K E+ GKQVE+K+
Sbjct: 155 FKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEEILSHGKMCELGGKQVEIKK 214
Query: 611 AEPKKPLFAPAPTYG 655
AEPKK L P P YG
Sbjct: 215 AEPKKALPEPEPAYG 229
>gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 261 bits (668), Expect = 1e-67
Identities = 125/194 (64%), Positives = 158/194 (81%), Gaps = 2/194 (1%)
Frame = +2
Query: 80 QNPKNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGF 259
Q ND S SPGKIFIGGLS+ T+SSAF +F +YG++ DSVIMKD++TG PRGF
Sbjct: 32 QEKNNDVS------SPGKIFIGGLSRSTTSSAFTKHFSKYGELTDSVIMKDRLTGQPRGF 85
Query: 260 GFVTYSDPSVIDKVLKDKHVLDGKTVEIKRTIPK--APKGGKTKKIFVGGIPTSITADQL 433
GFVTY+DPSVIDKV++DKH+LDGKTVEIKRTIP+ + K KTKK+FVGGIPTSIT D+
Sbjct: 86 GFVTYADPSVIDKVIQDKHILDGKTVEIKRTIPRGNSSKAPKTKKVFVGGIPTSITEDEF 145
Query: 434 KDFFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRA 613
KD+FSKFGK+V+ QIMQ R TG SRGFGF+TF++E+ V++++S+ + +E+ GKQVE+K+A
Sbjct: 146 KDYFSKFGKVVEHQIMQDRNTGRSRGFGFITFETEQAVEEIISQGRMLELGGKQVEIKKA 205
Query: 614 EPKKPLFAPAPTYG 655
EPKKPL P YG
Sbjct: 206 EPKKPLPDAGPIYG 219
>gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 256 bits (654), Expect = 4e-66
Identities = 122/194 (62%), Positives = 158/194 (81%), Gaps = 2/194 (1%)
Frame = +2
Query: 80 QNPKNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGF 259
++ NDTS + + SPGKIFIGGLS+ T++ F +F +YG++ DSVIMKD+ TG PRGF
Sbjct: 32 EDKNNDTSREAS--SPGKIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGF 89
Query: 260 GFVTYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKA--PKGGKTKKIFVGGIPTSITADQL 433
GFVTY+D SV+DKV++DKH+LDG+TVEIKRTIP+ KG KTKKIFVGGIPT+IT D+
Sbjct: 90 GFVTYADASVVDKVIEDKHILDGRTVEIKRTIPRGNTSKGPKTKKIFVGGIPTTITEDEF 149
Query: 434 KDFFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRA 613
KD+FSKFGK+ + QIMQ R+TG SRGFGF+TFDSE+VV++++S+ K IE+ GKQVE+K+A
Sbjct: 150 KDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEEIISQGKMIELGGKQVEIKKA 209
Query: 614 EPKKPLFAPAPTYG 655
EPKKP P +G
Sbjct: 210 EPKKPSSDAGPVHG 223
>ref|XP_006852315.1| hypothetical protein AMTR_s00049p00200350 [Amborella trichopoda]
gi|548855919|gb|ERN13782.1| hypothetical protein
AMTR_s00049p00200350 [Amborella trichopoda]
Length = 366
Score = 244 bits (622), Expect = 2e-62
Identities = 121/202 (59%), Positives = 153/202 (75%), Gaps = 7/202 (3%)
Frame = +2
Query: 71 GSSQNPKNDTS----HKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKV 238
G +++ K+D H SPGKIFIGGL+KET+ + F YF +YG+I DSVIMKD+
Sbjct: 13 GGAEDVKSDDEKSQPHTGEGASPGKIFIGGLAKETTLATFTKYFGKYGEITDSVIMKDRR 72
Query: 239 TGHPRGFGFVTYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKAPKGG---KTKKIFVGGIP 409
TG PRGFGFVTY+DPSV+DKV+++ HV++GK VEIKRTIPK G KTKKIFVGG+P
Sbjct: 73 TGQPRGFGFVTYADPSVVDKVIQENHVINGKQVEIKRTIPKGSIGSKDFKTKKIFVGGVP 132
Query: 410 TSITADQLKDFFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAG 589
TS+T D+ KDFFSKFG++ + QIM+ +T SRGFGF+TF++E+ VDDLL K IE+AG
Sbjct: 133 TSVTDDEFKDFFSKFGEVKEHQIMRDHSTNRSRGFGFITFETEQAVDDLLVKGNRIELAG 192
Query: 590 KQVELKRAEPKKPLFAPAPTYG 655
QVE+K+AEPKKP P P YG
Sbjct: 193 AQVEIKKAEPKKP-NPPPPKYG 213
>emb|CBI39777.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 241 bits (614), Expect = 2e-61
Identities = 115/193 (59%), Positives = 151/193 (78%), Gaps = 4/193 (2%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
K+D H SPGKIFIGGL+K+T+ + FN +F +YGDI DSVIMKD+ TG PRGFGF+
Sbjct: 6 KSDNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFI 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKA---PKGGKTKKIFVGGIPTSITADQLKD 439
TY+DPSV+D+V++D HV++GK VEIKRTIPK K KTKKIFVGG+P+++T D+ K+
Sbjct: 66 TYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTEDEFKN 125
Query: 440 FFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRAEP 619
FFSK+GK+V+ QI++ T SRGFGF+ FDSE+VVD+++SK I++AG QVE+K+AEP
Sbjct: 126 FFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAEP 185
Query: 620 KKPLF-APAPTYG 655
KK PAP YG
Sbjct: 186 KKASNPPPAPAYG 198
>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
vinifera] gi|147768836|emb|CAN78130.1| hypothetical
protein VITISV_036088 [Vitis vinifera]
Length = 348
Score = 241 bits (614), Expect = 2e-61
Identities = 115/193 (59%), Positives = 151/193 (78%), Gaps = 4/193 (2%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
K+D H SPGKIFIGGL+K+T+ + FN +F +YGDI DSVIMKD+ TG PRGFGF+
Sbjct: 6 KSDNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFI 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKA---PKGGKTKKIFVGGIPTSITADQLKD 439
TY+DPSV+D+V++D HV++GK VEIKRTIPK K KTKKIFVGG+P+++T D+ K+
Sbjct: 66 TYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTEDEFKN 125
Query: 440 FFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRAEP 619
FFSK+GK+V+ QI++ T SRGFGF+ FDSE+VVD+++SK I++AG QVE+K+AEP
Sbjct: 126 FFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAEP 185
Query: 620 KKPLF-APAPTYG 655
KK PAP YG
Sbjct: 186 KKASNPPPAPAYG 198
>gb|EXC21514.1| Heterogeneous nuclear ribonucleoprotein 27C [Morus notabilis]
Length = 352
Score = 239 bits (611), Expect = 4e-61
Identities = 117/193 (60%), Positives = 148/193 (76%), Gaps = 4/193 (2%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
K D H SPGKIFIGGL+K+T + FN +F +YG+I+DSVIMKD+ TG PRGFGF+
Sbjct: 6 KGDNPHSGDGASPGKIFIGGLAKDTHYATFNKHFGKYGEIVDSVIMKDRFTGQPRGFGFI 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKA---PKGGKTKKIFVGGIPTSITADQLKD 439
TY+DPSV+D V++D HV++GK VEIKRTIPK K KTKKIFVGGIP+++T D+LK
Sbjct: 66 TYADPSVVDMVIEDTHVINGKQVEIKRTIPKGQGHTKDFKTKKIFVGGIPSTVTEDELKS 125
Query: 440 FFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRAEP 619
FFS++GK+V+ QI+ T SRGFGFV F+SE+VVD+LLSK ++IAG QVE+K+AEP
Sbjct: 126 FFSEYGKVVEHQIIHDHETNRSRGFGFVIFESEEVVDELLSKGNMVDIAGTQVEIKKAEP 185
Query: 620 KKPLF-APAPTYG 655
KK PAP YG
Sbjct: 186 KKASNPPPAPAYG 198
>gb|EOY11959.1| RNA-binding family protein [Theobroma cacao]
Length = 348
Score = 239 bits (611), Expect = 4e-61
Identities = 116/193 (60%), Positives = 148/193 (76%), Gaps = 4/193 (2%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
+ND SPGKIFIGGL+K+T+ FN YF +YG+IIDSVIMKD+ TG PRGFGF+
Sbjct: 6 RNDNPFSGDGASPGKIFIGGLAKDTTFPQFNKYFAKYGEIIDSVIMKDRYTGQPRGFGFI 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKA---PKGGKTKKIFVGGIPTSITADQLKD 439
TY+DPSV+DKV+++ H+++GK VEIKRTIPK K KTKKIFVGGIP+S+T D+ +
Sbjct: 66 TYADPSVVDKVIEEDHIINGKQVEIKRTIPKGSSHSKDFKTKKIFVGGIPSSVTEDEFRS 125
Query: 440 FFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRAEP 619
FFS +GK+++ QI++ T SRGFGF+ FDSE+VVDDLLSK I++AG QVE+K+AEP
Sbjct: 126 FFSNYGKVMEHQIIRDHATNRSRGFGFIIFDSEEVVDDLLSKGNMIDMAGTQVEIKKAEP 185
Query: 620 KKPLF-APAPTYG 655
KK PAP YG
Sbjct: 186 KKASNPPPAPAYG 198
>ref|XP_006474836.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Citrus
sinensis]
Length = 349
Score = 239 bits (609), Expect = 7e-61
Identities = 115/189 (60%), Positives = 147/189 (77%), Gaps = 3/189 (1%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
K D H SPGKIFIGGL K+T+ + FN +F +YGDI DSVIMKD+ TG PRGFGF+
Sbjct: 6 KADNPHTGDGASPGKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFI 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKA---PKGGKTKKIFVGGIPTSITADQLKD 439
TY+DPSV+DKV++D H+++GK VEIKRTIPK K KTKKIFVGGIP+S++ D+LK+
Sbjct: 66 TYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVSEDELKN 125
Query: 440 FFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRAEP 619
FFSK+GK+++ QI++ T SRGFGFV FDSE+VVD++LSK I++AG QVE+K+AEP
Sbjct: 126 FFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEP 185
Query: 620 KKPLFAPAP 646
KK P P
Sbjct: 186 KKSSNPPPP 194
>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis] gi|223538031|gb|EEF39644.1| Heterogeneous
nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 348
Score = 238 bits (607), Expect = 1e-60
Identities = 116/193 (60%), Positives = 148/193 (76%), Gaps = 4/193 (2%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
K+D H SPGKIFIGGL+K+T+ + FN +F RYG+I DSVIMKD+ TG PRGFGF+
Sbjct: 6 KSDNPHSGDGASPGKIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFI 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKA---PKGGKTKKIFVGGIPTSITADQLKD 439
TY+DPSV+DKV++D HV+ GK VEIKRTIPK K KTKKIFVGGIP+S+T D+ K
Sbjct: 66 TYADPSVVDKVIEDTHVIHGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTEDEFKG 125
Query: 440 FFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRAEP 619
FFSK+G++V+ QI++ T SRGFGF+ FDSE+ VD++LS I++AG QVE+K+AEP
Sbjct: 126 FFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEIKKAEP 185
Query: 620 KKPLF-APAPTYG 655
KK PAP+YG
Sbjct: 186 KKASNPPPAPSYG 198
>ref|NP_683559.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994764|dbj|BAB03120.1| unnamed protein product
[Arabidopsis thaliana] gi|19347908|gb|AAL85976.1|
unknown protein [Arabidopsis thaliana]
gi|21689785|gb|AAM67536.1| unknown protein [Arabidopsis
thaliana] gi|62320244|dbj|BAD94504.1| hypothetical
protein [Arabidopsis thaliana]
gi|332641794|gb|AEE75315.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 358
Score = 237 bits (605), Expect = 2e-60
Identities = 113/194 (58%), Positives = 149/194 (76%), Gaps = 5/194 (2%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
+ND SPGKIFIGGL K+T+++ FN +F +YG+I DSVIM+D+ TG PRGFGF+
Sbjct: 6 RNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFI 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKAPKGG-----KTKKIFVGGIPTSITADQL 433
T++DPSV+DKV++D HV++GK VEIKRTIPK G KTKKIFVGGIP+++T D+L
Sbjct: 66 TFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDEL 125
Query: 434 KDFFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRA 613
KDFF+K+G +V+ Q+++ T SRGFGFV FDSE+VVD+LLSK I++A QVE+K+A
Sbjct: 126 KDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKA 185
Query: 614 EPKKPLFAPAPTYG 655
EPKK L P+YG
Sbjct: 186 EPKKSLNRSPPSYG 199
Score = 60.8 bits (146), Expect = 3e-07
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +2
Query: 86 PKNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGF 265
PK ++ KIF+GG+ + +F +YG++++ +++D T RGFGF
Sbjct: 95 PKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGF 154
Query: 266 VTYSDPSVIDKVLKDKHVLD--GKTVEIKRTIPK 361
V + V+D++L +++D VEIK+ PK
Sbjct: 155 VIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPK 188
>ref|XP_006407249.1| hypothetical protein EUTSA_v10021050mg [Eutrema salsugineum]
gi|557108395|gb|ESQ48702.1| hypothetical protein
EUTSA_v10021050mg [Eutrema salsugineum]
Length = 348
Score = 236 bits (603), Expect = 3e-60
Identities = 114/194 (58%), Positives = 149/194 (76%), Gaps = 5/194 (2%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
++D SPGKIFIGGL K+T+++ FN +F +YG+I DSVIM+D+ TG PRGFGF+
Sbjct: 6 RSDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFI 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKAPKGG-----KTKKIFVGGIPTSITADQL 433
TY+DPSV+DKV++D H+++GK VEIKRTIPK G KTKKIFVGGIP+++T D+L
Sbjct: 66 TYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAGGNQSKDFKTKKIFVGGIPSTVTEDEL 125
Query: 434 KDFFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRA 613
KDFF+K+G IV+ QI++ T SRGFGFV FDSE+VVD+LLSK K I++A QVE+K+A
Sbjct: 126 KDFFAKYGTIVEHQIIRDHETNRSRGFGFVIFDSEEVVDELLSKGKMIDMADTQVEIKKA 185
Query: 614 EPKKPLFAPAPTYG 655
EPKK P+YG
Sbjct: 186 EPKKSSNRSPPSYG 199
Score = 60.5 bits (145), Expect = 4e-07
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +2
Query: 86 PKNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGF 265
PK ++ KIF+GG+ + +F +YG I++ I++D T RGFGF
Sbjct: 95 PKGAGGNQSKDFKTKKIFVGGIPSTVTEDELKDFFAKYGTIVEHQIIRDHETNRSRGFGF 154
Query: 266 VTYSDPSVIDKVLKDKHVLD--GKTVEIKRTIPK 361
V + V+D++L ++D VEIK+ PK
Sbjct: 155 VIFDSEEVVDELLSKGKMIDMADTQVEIKKAEPK 188
>ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus] gi|449496860|ref|XP_004160246.1|
PREDICTED: nuclear polyadenylated RNA-binding protein
4-like [Cucumis sativus]
Length = 347
Score = 236 bits (601), Expect = 6e-60
Identities = 116/195 (59%), Positives = 150/195 (76%), Gaps = 6/195 (3%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
K++ H SPGKIFIGGL+K+T+ + FN +F YG+I DSVIMKD+ TG PRGFGF+
Sbjct: 6 KSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFI 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKA---PKGGKTKKIFVGGIPTSITADQLKD 439
TY+DPSV+DKV++D HV++GK VEIKRTIPK K KTKKIFVGGIP+++T D+ K
Sbjct: 66 TYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDEFKH 125
Query: 440 FFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRAEP 619
FFSK+GKIV+ QI++ T SRGFGF+ F+ E+VVD++LSK I+++G QVE+K+AEP
Sbjct: 126 FFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEP 185
Query: 620 KK---PLFAPAPTYG 655
KK PL PAP YG
Sbjct: 186 KKSSNPL--PAPAYG 198
>emb|CBI18525.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 234 bits (597), Expect = 2e-59
Identities = 110/182 (60%), Positives = 147/182 (80%), Gaps = 3/182 (1%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
K +T+H SPGKIFIGGL+K+T+ +AFN +F++YG+I DSVIMKD+ TG PRGFGFV
Sbjct: 6 KGNTTHTGDGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFV 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKA---PKGGKTKKIFVGGIPTSITADQLKD 439
TY+DPSV+D V++D HV++GK VEIKRTIPK K KTKKIFVGG+P+++T D+ KD
Sbjct: 66 TYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTEDEFKD 125
Query: 440 FFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRAEP 619
FFSK+GK+ + QI++ T SRGFGF+ F+SE+VVD++LS+ I++AG QVE+K+AEP
Sbjct: 126 FFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKAEP 185
Query: 620 KK 625
KK
Sbjct: 186 KK 187
>ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 234 bits (597), Expect = 2e-59
Identities = 110/182 (60%), Positives = 147/182 (80%), Gaps = 3/182 (1%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
K +T+H SPGKIFIGGL+K+T+ +AFN +F++YG+I DSVIMKD+ TG PRGFGFV
Sbjct: 6 KGNTTHTGDGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFV 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKA---PKGGKTKKIFVGGIPTSITADQLKD 439
TY+DPSV+D V++D HV++GK VEIKRTIPK K KTKKIFVGG+P+++T D+ KD
Sbjct: 66 TYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTEDEFKD 125
Query: 440 FFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRAEP 619
FFSK+GK+ + QI++ T SRGFGF+ F+SE+VVD++LS+ I++AG QVE+K+AEP
Sbjct: 126 FFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKAEP 185
Query: 620 KK 625
KK
Sbjct: 186 KK 187
>gb|ESW22924.1| hypothetical protein PHAVU_004G006700g [Phaseolus vulgaris]
Length = 374
Score = 234 bits (596), Expect = 2e-59
Identities = 112/190 (58%), Positives = 145/190 (76%), Gaps = 3/190 (1%)
Frame = +2
Query: 80 QNPKNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGF 259
+ P N SPGKIFIGGL++ET+ + F +F +YG+I DSVIMKD+ TG PRGF
Sbjct: 26 EEPHNSQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGF 85
Query: 260 GFVTYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKAPKGGK---TKKIFVGGIPTSITADQ 430
GF+TY+DPSV+DKV++D HV++GK VEIKRTIP+ G K TKKIFVGGIP+++T D+
Sbjct: 86 GFITYADPSVVDKVIEDTHVINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDE 145
Query: 431 LKDFFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKR 610
+DFF+++G++ D QIM+ +T SRGFGF+TFDSE+ VDDLLS IE AG QVE+K+
Sbjct: 146 FRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIEFAGAQVEIKK 205
Query: 611 AEPKKPLFAP 640
AEPKKP AP
Sbjct: 206 AEPKKPNSAP 215
>gb|EMJ16735.1| hypothetical protein PRUPE_ppa007179mg [Prunus persica]
Length = 379
Score = 233 bits (595), Expect = 3e-59
Identities = 111/185 (60%), Positives = 144/185 (77%), Gaps = 3/185 (1%)
Frame = +2
Query: 104 HKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFVTYSDP 283
H SPGKIFIGGL++ET+++ F +F +YG+IIDSVIMKD+ TG PRGFGFVTY+DP
Sbjct: 36 HTGDGASPGKIFIGGLARETTTAQFIKHFGKYGEIIDSVIMKDRKTGQPRGFGFVTYADP 95
Query: 284 SVIDKVLKDKHVLDGKTVEIKRTIPKAPKGG---KTKKIFVGGIPTSITADQLKDFFSKF 454
SV+DKV+ + HV++GK VEIKRTIP+ G KTKKIFVGGIPT++ D+ DFFS+F
Sbjct: 96 SVVDKVIDETHVINGKQVEIKRTIPRGAMGSKDFKTKKIFVGGIPTTVNEDEFSDFFSQF 155
Query: 455 GKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRAEPKKPLF 634
G++ + QIM+ +TG SRGFGF+TFD+E+ VD+LL K +E AG QVE+K+AEPKKP
Sbjct: 156 GEVKEHQIMRDHSTGRSRGFGFITFDTEQSVDELLDKGNKLEFAGAQVEIKKAEPKKPNL 215
Query: 635 APAPT 649
AP+
Sbjct: 216 PAAPS 220
Score = 74.7 bits (182), Expect = 2e-11
Identities = 39/89 (43%), Positives = 52/89 (58%)
Frame = +2
Query: 356 PKAPKGGKTKKIFVGGIPTSITADQLKDFFSKFGKIVDQQIMQKRTTGESRGFGFVTFDS 535
P G KIF+GG+ T Q F K+G+I+D IM+ R TG+ RGFGFVT+
Sbjct: 35 PHTGDGASPGKIFIGGLARETTTAQFIKHFGKYGEIIDSVIMKDRKTGQPRGFGFVTYAD 94
Query: 536 EKVVDDLLSKHKTIEIAGKQVELKRAEPK 622
VVD ++ +T I GKQVE+KR P+
Sbjct: 95 PSVVDKVID--ETHVINGKQVEIKRTIPR 121
>gb|EOY02507.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 368
Score = 233 bits (594), Expect = 4e-59
Identities = 112/197 (56%), Positives = 151/197 (76%), Gaps = 5/197 (2%)
Frame = +2
Query: 74 SSQNPKNDTSHK--DAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGH 247
SS +P++D S SPGKIF+GGL++ET+S+ F +F +YG+I DSVIMKD+ TG
Sbjct: 19 SSDHPEDDKSQPLTGDGASPGKIFVGGLARETNSAQFLEHFGQYGEITDSVIMKDRKTGQ 78
Query: 248 PRGFGFVTYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKAPKGG---KTKKIFVGGIPTSI 418
PRGFGFVTY++PSV+DKV++D H+++GK VEIKRTIPK G KT+KIFVGGIP+S+
Sbjct: 79 PRGFGFVTYAEPSVVDKVIEDTHIINGKQVEIKRTIPKGAAGSKDFKTRKIFVGGIPSSV 138
Query: 419 TADQLKDFFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQV 598
+ D+ KDFF ++G++ + QIM+ T SRGFGF+TF++E VDDLL+K ++ AG QV
Sbjct: 139 SEDEFKDFFMQYGEVKEHQIMRDHATNRSRGFGFITFETEHAVDDLLAKGNKVDFAGAQV 198
Query: 599 ELKRAEPKKPLFAPAPT 649
E+KRAEPKKP PAP+
Sbjct: 199 EIKRAEPKKPNPPPAPS 215
>ref|XP_002300392.2| hypothetical protein POPTR_0001s37920g [Populus trichocarpa]
gi|550349134|gb|EEE85197.2| hypothetical protein
POPTR_0001s37920g [Populus trichocarpa]
Length = 349
Score = 232 bits (591), Expect = 8e-59
Identities = 116/194 (59%), Positives = 149/194 (76%), Gaps = 5/194 (2%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
K D H SPGKIFIGGL+K+T+ + FN +F +YG+I DSVIMKD+ TG PRGFGF+
Sbjct: 6 KIDNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGEITDSVIMKDRYTGQPRGFGFI 65
Query: 269 TYSDPSVIDKVLKDKHVLDGK-TVEIKRTIPKA---PKGGKTKKIFVGGIPTSITADQLK 436
TY+DPSV+DKV++D HV++GK VEIKRTIPK K KTKKIFVGGIP+S+T D+ +
Sbjct: 66 TYADPSVVDKVIEDTHVINGKQQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTEDEFQ 125
Query: 437 DFFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRAE 616
+FFSK GK+V+ QI++ T SRGFGF+ FDSE+VVD++LS I++AG QVE+K+AE
Sbjct: 126 NFFSKHGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMLSNGNMIDMAGTQVEIKKAE 185
Query: 617 PKKPLFAP-APTYG 655
PKK P AP+YG
Sbjct: 186 PKKASNPPSAPSYG 199
>ref|XP_006298001.1| hypothetical protein CARUB_v10014046mg [Capsella rubella]
gi|482566710|gb|EOA30899.1| hypothetical protein
CARUB_v10014046mg [Capsella rubella]
Length = 359
Score = 231 bits (590), Expect = 1e-58
Identities = 111/194 (57%), Positives = 146/194 (75%), Gaps = 5/194 (2%)
Frame = +2
Query: 89 KNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGFV 268
++D SPGKIFIGGL K+T+++ FN +F +YG+I DSVIM+D+ TG PRGFGF+
Sbjct: 6 RSDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFI 65
Query: 269 TYSDPSVIDKVLKDKHVLDGKTVEIKRTIPKAPKGG-----KTKKIFVGGIPTSITADQL 433
T++DPSV+DKV++D HV++GK VEIKRTIPK G KTKKIFVGGIP+++T D L
Sbjct: 66 TFADPSVVDKVIEDNHVINGKQVEIKRTIPKGAGGNQSKDFKTKKIFVGGIPSTVTEDDL 125
Query: 434 KDFFSKFGKIVDQQIMQKRTTGESRGFGFVTFDSEKVVDDLLSKHKTIEIAGKQVELKRA 613
KDFF+K+G + + QI++ T SRGFGFV FDSE+VVD+LLSK I++A QVE+K+A
Sbjct: 126 KDFFAKYGNVAEHQIIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKA 185
Query: 614 EPKKPLFAPAPTYG 655
EPKK P+YG
Sbjct: 186 EPKKSSNRSPPSYG 199
Score = 59.7 bits (143), Expect = 7e-07
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 86 PKNDTSHKDAPGSPGKIFIGGLSKETSSSAFNSYFKRYGDIIDSVIMKDKVTGHPRGFGF 265
PK ++ KIF+GG+ + +F +YG++ + I++D T RGFGF
Sbjct: 95 PKGAGGNQSKDFKTKKIFVGGIPSTVTEDDLKDFFAKYGNVAEHQIIRDHETNRSRGFGF 154
Query: 266 VTYSDPSVIDKVLKDKHVLD--GKTVEIKRTIPK 361
V + V+D++L +++D VEIK+ PK
Sbjct: 155 VIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPK 188