BLASTX nr result

ID: Ephedra27_contig00003585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00003585
         (702 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24494.1| unknown [Picea sitchensis]                              96   1e-17
gb|AFG67784.1| hypothetical protein 2_9274_01, partial [Pinus ta...    82   2e-13
ref|XP_001757786.1| predicted protein [Physcomitrella patens] gi...    69   1e-09
ref|XP_001754282.1| predicted protein [Physcomitrella patens] gi...    64   5e-08
ref|XP_001773729.1| predicted protein [Physcomitrella patens] gi...    62   2e-07
ref|XP_001784434.1| predicted protein [Physcomitrella patens] gi...    59   1e-06

>gb|ABK24494.1| unknown [Picea sitchensis]
          Length = 366

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 47/113 (41%), Positives = 74/113 (65%), Gaps = 8/113 (7%)
 Frame = +2

Query: 8   PLWAAKMMNLELKIRDEVNKRKADKGSSSMLQGLDNMHMEVKQLY--------QQLNSRD 163
           P WA+ M+ L+ K+++E++K+KA   SS++L  LD +H EVK+LY         + +S  
Sbjct: 251 PSWASSMLRLQSKVKEEIDKKKAGASSSALLHELDCVHSEVKKLYIVLDKMLADKTSSAS 310

Query: 164 GDTKVSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGTLSH 322
              K+ E+R+ V +LQ   + L+K M P+E Q++E+Y+MLVSSRV LLG  +H
Sbjct: 311 NREKMDEVRQSVGQLQGYAETLQKGMIPLENQIKELYRMLVSSRVALLGVFTH 363


>gb|AFG67784.1| hypothetical protein 2_9274_01, partial [Pinus taeda]
          Length = 136

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 40/100 (40%), Positives = 65/100 (65%), Gaps = 8/100 (8%)
 Frame = +2

Query: 8   PLWAAKMMNLELKIRDEVNKRKADKGSSSMLQGLDNMHMEVKQLYQQL--------NSRD 163
           P WA+ M+ L+ K+++E++K+KA   SS++L  LD +H EVK+LY  L        NS  
Sbjct: 37  PSWASSMLRLQSKVKEEIDKKKAKASSSALLHELDCVHSEVKKLYNVLDKMLADKANSAS 96

Query: 164 GDTKVSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKML 283
              K+ E+R+ V +LQ+  + L+K M P+E Q++E+Y+ML
Sbjct: 97  NREKMDEVRQSVGQLQRYAEVLQKGMIPLENQIKELYRML 136


>ref|XP_001757786.1| predicted protein [Physcomitrella patens]
           gi|162691062|gb|EDQ77426.1| predicted protein
           [Physcomitrella patens]
          Length = 357

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 38/113 (33%), Positives = 76/113 (67%), Gaps = 7/113 (6%)
 Frame = +2

Query: 2   HQPLWAAKMMNLELKIRDEVNKRKADKGSSSMLQGLDNMHMEVKQLYQ----QLNSRDGD 169
           +Q LWA+ +++L+ ++++E +KRK +KGS ++L+ LDN+ + V++LY+    ++N R   
Sbjct: 241 NQCLWASSLLSLQQRVKEETDKRK-NKGSIALLRELDNVDVLVRRLYEVVDKKVNERSLF 299

Query: 170 TKVSEIREC---VTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGTLS 319
           T   +  +    V +L  + Q+L + +AP+E+ V E++++L++SR+ LL  LS
Sbjct: 300 TNTQDSEQLSFLVEELACTSQNLGRGLAPLEECVNELFRLLIASRIALLDLLS 352


>ref|XP_001754282.1| predicted protein [Physcomitrella patens]
           gi|162694384|gb|EDQ80732.1| predicted protein
           [Physcomitrella patens]
          Length = 381

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 37/132 (28%), Positives = 77/132 (58%), Gaps = 7/132 (5%)
 Frame = +2

Query: 14  WAAKMMNLELKIRDEVNKRKADKGSSSMLQGLDNMHMEVKQLYQQLNSRDGDT------- 172
           W+  +++L+L++++  ++   + GS + L+ L N+   V+ L++ LN    D        
Sbjct: 252 WSEALISLQLRVKEVTDEM--ENGSIAQLEELHNVDASVRGLHEFLNGHLTDNNFLITQE 309

Query: 173 KVSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGTLSHCSRY*KQCAS 352
           +++E++  + +L+K   DL   + P+E QV E+++ML+SSR+ LL T+S+     K C  
Sbjct: 310 EIAEMKVMLEELRKHSSDLGIGLVPLEIQVNELFRMLISSRLALLDTISNS----KTCGP 365

Query: 353 CLRVSSKRLYKN 388
            L +S + +Y++
Sbjct: 366 YLMLSYENVYRS 377


>ref|XP_001773729.1| predicted protein [Physcomitrella patens]
           gi|162674985|gb|EDQ61486.1| predicted protein
           [Physcomitrella patens]
          Length = 361

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 36/109 (33%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
 Frame = +2

Query: 14  WAAKMMNLELKIRDEVNKRKADKGSSSMLQGLDNMHMEVKQLYQ----QLNSRD---GDT 172
           W+A +  L+ ++++E +KRK +KGS ++L+ LD++   V++L++     LN R       
Sbjct: 250 WSASLTTLQQRVKEETDKRK-NKGSIALLRELDSVDASVRRLHEILDRHLNGRAFPLSRE 308

Query: 173 KVSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGTLS 319
           +  E+ + V  L+K   DL + + P+E QV E++K L++SR+ LL  +S
Sbjct: 309 QSQELAQEVEFLRKHSSDLGQGLTPLEVQVNELFKTLIASRLALLDIIS 357


>ref|XP_001784434.1| predicted protein [Physcomitrella patens]
           gi|162664005|gb|EDQ50741.1| predicted protein
           [Physcomitrella patens]
          Length = 361

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 33/109 (30%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
 Frame = +2

Query: 14  WAAKMMNLELKIRDEVNKRKADKGSSSMLQGLDNMHMEVKQLY----QQLNSRD---GDT 172
           W+  +++L+ +++++ +KRK +KGS ++L+ LD++   V++L+    Q L+ R       
Sbjct: 250 WSPSLISLQQRVKEDTDKRK-NKGSIALLRELDSVDASVRRLHGILDQYLSGRAFPLSQE 308

Query: 173 KVSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGTLS 319
           +  E+   V +L+K   DL + + P+E  V E+++ML++SR+ LL  +S
Sbjct: 309 QAQELALDVDELRKHSSDLGQGLTPLEGHVNELFRMLIASRLALLDIIS 357


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