BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00003409
         (802 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25816.1| unknown [Picea sitchensis]                             197   5e-48
ref|XP_006585341.1| PREDICTED: 30S ribosomal protein 2, chloropl...   183   7e-44
ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloropl...   183   7e-44
ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloropl...   182   9e-44
gb|EXB59937.1| 30S ribosomal protein 2 [Morus notabilis]              181   3e-43
ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloropl...   181   3e-43
gb|AHA84212.1| chloroplast 30S ribosomal protein 2 [Phaseolus vu...   179   8e-43
gb|ESW21069.1| hypothetical protein PHAVU_005G039000g [Phaseolus...   179   1e-42
ref|XP_004515536.1| PREDICTED: 30S ribosomal protein 2, chloropl...   177   4e-42
gb|AFK42365.1| unknown [Medicago truncatula]                          176   9e-42
ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula] ...   176   9e-42
ref|XP_006482842.1| PREDICTED: 30S ribosomal protein 2, chloropl...   175   2e-41
gb|EOX96750.1| RNA-binding family protein [Theobroma cacao]           174   3e-41
ref|XP_006439065.1| hypothetical protein CICLE_v10032498mg [Citr...   172   9e-41
ref|XP_002314019.1| hypothetical protein POPTR_0009s07030g [Popu...   172   1e-40
gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]      172   2e-40
ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloropl...   171   2e-40
ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ri...   170   5e-40
ref|XP_006660491.1| PREDICTED: 30S ribosomal protein 2, chloropl...   169   8e-40
ref|XP_004956457.1| PREDICTED: 30S ribosomal protein 2, chloropl...   169   8e-40

>gb|ABK25816.1| unknown [Picea sitchensis]
          Length = 248

 Score =  197 bits (500), Expect = 5e-48
 Identities = 98/139 (70%), Positives = 119/139 (85%), Gaps = 1/139 (0%)
 Frame = -1

Query: 418 KPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEE 239
           K +   R++YVGNIPR+ TNEELA +F E G V+KAEVMYDKYT++SRRFAFVTMSTVE+
Sbjct: 67  KQKEIERRLYVGNIPRTSTNEELAKIFGECGNVEKAEVMYDKYTKRSRRFAFVTMSTVED 126

Query: 238 AQAAVEKLNETEMGGRTIKVNISEKPLDLSGLKAQTEE-PFIDSPHKVYVGNISRTVTTE 62
           AQAA+EK+N TE+GGR IKVNI+EKPLD+SGL   TEE  FIDSP+KVYVGN+++ VTTE
Sbjct: 127 AQAAIEKMNGTEIGGRVIKVNITEKPLDVSGLNRLTEEAEFIDSPYKVYVGNLAKAVTTE 186

Query: 61  TLKKAFSEKGSILSAKVVR 5
           TLKK F+EKG++L AKV R
Sbjct: 187 TLKKKFAEKGNVLDAKVTR 205


>ref|XP_006585341.1| PREDICTED: 30S ribosomal protein 2, chloroplastic isoform X2
           [Glycine max]
          Length = 302

 Score =  183 bits (464), Expect = 7e-44
 Identities = 95/145 (65%), Positives = 115/145 (79%), Gaps = 3/145 (2%)
 Frame = -1

Query: 430 QTAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMS 251
           Q A   E   R++YVGNIPR+VTNEELA +  E G V+KAEVMYDKY+ +SRRFAFVTM 
Sbjct: 116 QAATATEASARRLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMK 175

Query: 250 TVEEAQAAVEKLNETEMGGRTIKVNISEKPL---DLSGLKAQTEEPFIDSPHKVYVGNIS 80
           TVE+A A +EKLN TE+GGR +KVN++EKPL   DL  L+A+ E  FIDSPHKVYVGN++
Sbjct: 176 TVEDATAVIEKLNGTEIGGREVKVNVTEKPLSTPDLPLLQAE-ESEFIDSPHKVYVGNLA 234

Query: 79  RTVTTETLKKAFSEKGSILSAKVVR 5
           +TVTT+TLK  FSEKG +LSAKV R
Sbjct: 235 KTVTTDTLKNFFSEKGKVLSAKVSR 259



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 32/74 (43%), Positives = 46/74 (62%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT + L   FSE G V  A+V     T KS  + FVT S+ E+ +AA+  
Sbjct: 227 KVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISS 286

Query: 217 LNETEMGGRTIKVN 176
            N + + G+TI+VN
Sbjct: 287 FNNSLLEGQTIRVN 300


>ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic isoform X1
           [Glycine max]
          Length = 246

 Score =  183 bits (464), Expect = 7e-44
 Identities = 95/145 (65%), Positives = 115/145 (79%), Gaps = 3/145 (2%)
 Frame = -1

Query: 430 QTAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMS 251
           Q A   E   R++YVGNIPR+VTNEELA +  E G V+KAEVMYDKY+ +SRRFAFVTM 
Sbjct: 60  QAATATEASARRLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMK 119

Query: 250 TVEEAQAAVEKLNETEMGGRTIKVNISEKPL---DLSGLKAQTEEPFIDSPHKVYVGNIS 80
           TVE+A A +EKLN TE+GGR +KVN++EKPL   DL  L+A+ E  FIDSPHKVYVGN++
Sbjct: 120 TVEDATAVIEKLNGTEIGGREVKVNVTEKPLSTPDLPLLQAE-ESEFIDSPHKVYVGNLA 178

Query: 79  RTVTTETLKKAFSEKGSILSAKVVR 5
           +TVTT+TLK  FSEKG +LSAKV R
Sbjct: 179 KTVTTDTLKNFFSEKGKVLSAKVSR 203



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 32/74 (43%), Positives = 46/74 (62%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT + L   FSE G V  A+V     T KS  + FVT S+ E+ +AA+  
Sbjct: 171 KVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISS 230

Query: 217 LNETEMGGRTIKVN 176
            N + + G+TI+VN
Sbjct: 231 FNNSLLEGQTIRVN 244


>ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Glycine max]
          Length = 246

 Score =  182 bits (463), Expect = 9e-44
 Identities = 95/145 (65%), Positives = 115/145 (79%), Gaps = 3/145 (2%)
 Frame = -1

Query: 430 QTAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMS 251
           Q A   E   R++YVGNIPR+VTN+ELA +  E G V+KAEVMYDKY+ +SRRFAFVTM 
Sbjct: 60  QAATATEAAARRLYVGNIPRTVTNDELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMK 119

Query: 250 TVEEAQAAVEKLNETEMGGRTIKVNISEKP---LDLSGLKAQTEEPFIDSPHKVYVGNIS 80
           TVE+A A +EKLN TE+GGR IKVN++EKP   LDL  L+A+ E  FIDSPHKVYVGN++
Sbjct: 120 TVEDATAVIEKLNGTELGGREIKVNVTEKPLSTLDLPLLQAE-ESEFIDSPHKVYVGNLA 178

Query: 79  RTVTTETLKKAFSEKGSILSAKVVR 5
           +TVTT+TLK  FSEKG +LSAKV R
Sbjct: 179 KTVTTDTLKNFFSEKGKVLSAKVSR 203



 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 31/74 (41%), Positives = 45/74 (60%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT + L   FSE G V  A+V     T KS  + FVT  + E+ +AA+  
Sbjct: 171 KVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFPSEEDVEAAISS 230

Query: 217 LNETEMGGRTIKVN 176
            N + + G+TI+VN
Sbjct: 231 FNNSLLEGQTIRVN 244


>gb|EXB59937.1| 30S ribosomal protein 2 [Morus notabilis]
          Length = 267

 Score =  181 bits (459), Expect = 3e-43
 Identities = 90/133 (67%), Positives = 109/133 (81%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVE 221
           R++YVGNIPR+VTN ELA +  E+G V+KAEVMYDKY+ +SRRFAFVTM TVE+A AA+E
Sbjct: 77  RRLYVGNIPRTVTNNELAKIVGEYGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIE 136

Query: 220 KLNETEMGGRTIKVNISEKPLDLSGLKAQTEE-PFIDSPHKVYVGNISRTVTTETLKKAF 44
           KLN TE+GGR IKVN++EKPL    L  Q EE  F+DSPHKVYVGN+++ VTTETLK  F
Sbjct: 137 KLNGTEIGGREIKVNVTEKPLSGVDLSLQAEESQFVDSPHKVYVGNLAKNVTTETLKNFF 196

Query: 43  SEKGSILSAKVVR 5
           SEKG++L AKV R
Sbjct: 197 SEKGNVLGAKVSR 209


>ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
           sativus] gi|449489082|ref|XP_004158209.1| PREDICTED: 30S
           ribosomal protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 251

 Score =  181 bits (459), Expect = 3e-43
 Identities = 95/145 (65%), Positives = 114/145 (78%), Gaps = 4/145 (2%)
 Frame = -1

Query: 427 TAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMST 248
           T     +  RK+Y+GNIPR+V NEEL  +  E G V+KAEVMYDKY+ +SRRFAFVTM T
Sbjct: 65  TQGASSVAERKLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKT 124

Query: 247 VEEAQAAVEKLNETEMGGRTIKVNISEKP----LDLSGLKAQTEEPFIDSPHKVYVGNIS 80
           VE+A AA+EKLNETE+GGR IKVNI+EKP    +D+S L+A+ E  FIDSP+KVYVGNIS
Sbjct: 125 VEDANAAIEKLNETEVGGRKIKVNITEKPVVNTVDMSFLQAE-ESQFIDSPYKVYVGNIS 183

Query: 79  RTVTTETLKKAFSEKGSILSAKVVR 5
            TV+TETLK  FSEKG +LSAKV R
Sbjct: 184 STVSTETLKNFFSEKGKVLSAKVSR 208



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 33/74 (44%), Positives = 42/74 (56%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGNI  +V+ E L   FSE G V  A+V     T KS  + FVT S+ EE  AA+  
Sbjct: 176 KVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVDAAISS 235

Query: 217 LNETEMGGRTIKVN 176
            N   + G+ I+VN
Sbjct: 236 FNNALLEGQPIRVN 249


>gb|AHA84212.1| chloroplast 30S ribosomal protein 2 [Phaseolus vulgaris]
          Length = 246

 Score =  179 bits (455), Expect = 8e-43
 Identities = 92/144 (63%), Positives = 114/144 (79%), Gaps = 2/144 (1%)
 Frame = -1

Query: 430 QTAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMS 251
           Q A   E   R++YVGNIPR+V N+EL+ +  E G ++KAEVMYDKY+ +SRRFAFVTM 
Sbjct: 60  QAATVTEAAARRLYVGNIPRTVNNDELSKIVQEHGAIEKAEVMYDKYSGRSRRFAFVTMK 119

Query: 250 TVEEAQAAVEKLNETEMGGRTIKVNISEKPLDLSGLK-AQTEE-PFIDSPHKVYVGNISR 77
           TVE+A A +EKLN TE+GGR IKVN++EKPL  S L  +Q+EE  FIDSPHKVYVGN+++
Sbjct: 120 TVEDANAVIEKLNGTEIGGREIKVNVTEKPLSTSDLPLSQSEESQFIDSPHKVYVGNLAK 179

Query: 76  TVTTETLKKAFSEKGSILSAKVVR 5
           TVTT+TLKK F EKG +LSAKV R
Sbjct: 180 TVTTDTLKKFFFEKGKVLSAKVSR 203



 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 28/74 (37%), Positives = 44/74 (59%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT + L   F E G V  A+V     T KS  + FVT S+ ++ +AA+  
Sbjct: 171 KVYVGNLAKTVTTDTLKKFFFEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEDDVEAAISS 230

Query: 217 LNETEMGGRTIKVN 176
            N + + G+ ++VN
Sbjct: 231 FNNSSLEGQKVRVN 244


>gb|ESW21069.1| hypothetical protein PHAVU_005G039000g [Phaseolus vulgaris]
          Length = 241

 Score =  179 bits (454), Expect = 1e-42
 Identities = 90/134 (67%), Positives = 112/134 (83%), Gaps = 2/134 (1%)
 Frame = -1

Query: 400 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVE 221
           R++YVGNIPR+V N+EL+ +  E G ++KAEVMYDKY+ +SRRFAFVTM TVE+A A +E
Sbjct: 65  RRLYVGNIPRTVNNDELSKIVQEHGAIEKAEVMYDKYSGRSRRFAFVTMKTVEDANAVIE 124

Query: 220 KLNETEMGGRTIKVNISEKPLDLSGLK-AQTEE-PFIDSPHKVYVGNISRTVTTETLKKA 47
           KLN TE+GGR IKVN++EKPL  S L  +Q+EE  FIDSPHKVYVGN+++TVTT+TLKK 
Sbjct: 125 KLNGTEIGGREIKVNVTEKPLSTSDLPLSQSEESQFIDSPHKVYVGNLAKTVTTDTLKKF 184

Query: 46  FSEKGSILSAKVVR 5
           FSEKG +LSAKV R
Sbjct: 185 FSEKGKVLSAKVSR 198



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT + L   FSE G V  A+V     T KS  + FVT S+ ++ +AA+  
Sbjct: 166 KVYVGNLAKTVTTDTLKKFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEDDVEAAISS 225

Query: 217 LNETEMGGRTIKVN 176
            N + + G+ ++VN
Sbjct: 226 FNNSSLEGQKVRVN 239


>ref|XP_004515536.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cicer
           arietinum]
          Length = 250

 Score =  177 bits (449), Expect = 4e-42
 Identities = 88/142 (61%), Positives = 112/142 (78%), Gaps = 1/142 (0%)
 Frame = -1

Query: 427 TAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMST 248
           T   P+   RK+Y+GNIPR+VTN+ELA +  E G+V+KAEVMYDKY+++SRRFAFVTM T
Sbjct: 66  TVTSPKEADRKLYIGNIPRTVTNDELAQIVQEHGSVEKAEVMYDKYSKRSRRFAFVTMKT 125

Query: 247 VEEAQAAVEKLNETEMGGRTIKVNISEKPLDLSGLKAQTEE-PFIDSPHKVYVGNISRTV 71
           +E+A A VEKLN T++GGR IKVNI+EKPL    L  Q EE  F+DSP+KVYVGN+++TV
Sbjct: 126 IEDANAVVEKLNGTQIGGREIKVNITEKPLTTVDLSLQAEESTFVDSPYKVYVGNLAKTV 185

Query: 70  TTETLKKAFSEKGSILSAKVVR 5
           T+++LK  FSEKG  L AKV R
Sbjct: 186 TSDSLKNLFSEKGKALGAKVSR 207



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 31/74 (41%), Positives = 45/74 (60%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT++ L  +FSE G    A+V     T KS  F FVT S+ E+ +AA+  
Sbjct: 175 KVYVGNLAKTVTSDSLKNLFSEKGKALGAKVSRVPGTSKSSGFGFVTFSSDEDVEAAISS 234

Query: 217 LNETEMGGRTIKVN 176
            N   + G+ I+VN
Sbjct: 235 FNNALLEGQKIRVN 248


>gb|AFK42365.1| unknown [Medicago truncatula]
          Length = 235

 Score =  176 bits (446), Expect = 9e-42
 Identities = 88/133 (66%), Positives = 109/133 (81%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVE 221
           RK+YVGNIPR+V+N+EL  +  E G V+KAEVMYDKY+++SRRFAFVTM TVE+A AA E
Sbjct: 60  RKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAE 119

Query: 220 KLNETEMGGRTIKVNISEKPLDLSGLKAQT-EEPFIDSPHKVYVGNISRTVTTETLKKAF 44
           KLN TE+GGR IKVNI+EKPL   GL  Q  E  F+DSP+KVYVGN+++ VT+++LKK F
Sbjct: 120 KLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSDSLKKFF 179

Query: 43  SEKGSILSAKVVR 5
           SEKG+ LSAKV R
Sbjct: 180 SEKGNALSAKVSR 192



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT++ L   FSE G    A+V     T KS  F FVT S+ E+ +AA+  
Sbjct: 160 KVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISS 219

Query: 217 LNETEMGGRTIKVN 176
            N   + G+ I+VN
Sbjct: 220 FNNALLEGQKIRVN 233


>ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula]
           gi|355488100|gb|AES69303.1| 30S ribosomal protein
           [Medicago truncatula]
          Length = 235

 Score =  176 bits (446), Expect = 9e-42
 Identities = 88/133 (66%), Positives = 109/133 (81%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVE 221
           RK+YVGNIPR+V+N+EL  +  E G V+KAEVMYDKY+++SRRFAFVTM TVE+A AA E
Sbjct: 60  RKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAE 119

Query: 220 KLNETEMGGRTIKVNISEKPLDLSGLKAQT-EEPFIDSPHKVYVGNISRTVTTETLKKAF 44
           KLN TE+GGR IKVNI+EKPL   GL  Q  E  F+DSP+KVYVGN+++ VT+++LKK F
Sbjct: 120 KLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSDSLKKFF 179

Query: 43  SEKGSILSAKVVR 5
           SEKG+ LSAKV R
Sbjct: 180 SEKGNALSAKVSR 192



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT++ L   FSE G    A+V     T KS  F FVT S+ E+ +AA+  
Sbjct: 160 KVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISS 219

Query: 217 LNETEMGGRTIKVN 176
            N   + G+ I+VN
Sbjct: 220 FNNALLEGQKIRVN 233


>ref|XP_006482842.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Citrus
           sinensis]
          Length = 258

 Score =  175 bits (443), Expect = 2e-41
 Identities = 88/137 (64%), Positives = 112/137 (81%), Gaps = 3/137 (2%)
 Frame = -1

Query: 406 FRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAA 227
           F R+VY+GNIPR++ N+EL  +  E G V+KAEV+YDKYT +SRRFAFV M TVE+A A 
Sbjct: 80  FARRVYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAV 139

Query: 226 VEKLNETEMGGRTIKVNISEKPL---DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETL 56
           +EKLN TE+GGR IKVNI+EKPL   DLS L+A+ +  F+DSP+KVYVGN+++TVT+E L
Sbjct: 140 IEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAE-DSNFVDSPYKVYVGNLAKTVTSEML 198

Query: 55  KKAFSEKGSILSAKVVR 5
           KK FSEKG +LSAKV+R
Sbjct: 199 KKCFSEKGQVLSAKVLR 215



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 35/74 (47%), Positives = 49/74 (66%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT+E L   FSE G V  A+V+    T KS  F FVT S+ E+A+AA+  
Sbjct: 183 KVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTFSSEEDAEAAISS 242

Query: 217 LNETEMGGRTIKVN 176
           LN + + G+ I+VN
Sbjct: 243 LNNSLLEGQRIRVN 256


>gb|EOX96750.1| RNA-binding family protein [Theobroma cacao]
          Length = 253

 Score =  174 bits (441), Expect = 3e-41
 Identities = 88/135 (65%), Positives = 111/135 (82%), Gaps = 3/135 (2%)
 Frame = -1

Query: 400 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVE 221
           R++Y+GNIPR+V N+EL  +  E G V+KAEVMYDKY+ +SRRFAFVTM TVE+A AA+E
Sbjct: 77  RRLYIGNIPRTVNNDELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIE 136

Query: 220 KLNETEMGGRTIKVNISEKPL---DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKK 50
           KLN TE+G R IKVNI+EKPL   DLS L+ + +  F+DSPHKVYVGN+++T+TT+TLKK
Sbjct: 137 KLNGTEIGQREIKVNITEKPLPQVDLSLLQDE-DSQFVDSPHKVYVGNLAKTITTDTLKK 195

Query: 49  AFSEKGSILSAKVVR 5
            FSEKG +LSAKV R
Sbjct: 196 FFSEKGKVLSAKVSR 210



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 31/74 (41%), Positives = 45/74 (60%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ +++T + L   FSE G V  A+V     T KS  F FVT S+ EE +AA+  
Sbjct: 178 KVYVGNLAKTITTDTLKKFFSEKGKVLSAKVSRVPGTSKSGGFGFVTFSSEEEVEAAISA 237

Query: 217 LNETEMGGRTIKVN 176
            N + + G+ ++VN
Sbjct: 238 FNNSLLEGQQVRVN 251


>ref|XP_006439065.1| hypothetical protein CICLE_v10032498mg [Citrus clementina]
           gi|557541261|gb|ESR52305.1| hypothetical protein
           CICLE_v10032498mg [Citrus clementina]
          Length = 258

 Score =  172 bits (437), Expect = 9e-41
 Identities = 87/137 (63%), Positives = 111/137 (81%), Gaps = 3/137 (2%)
 Frame = -1

Query: 406 FRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAA 227
           F R+VY+GNIPR++ N+EL  +  E G V+KAEV+YDKYT +SRRFAFV M TVE+A A 
Sbjct: 80  FARRVYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAV 139

Query: 226 VEKLNETEMGGRTIKVNISEKPL---DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETL 56
           +EKLN TE+GGR IKVNI+EKPL   DLS L+A+ +  F+DSP+KVYVGN+++TVT+E L
Sbjct: 140 IEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAE-DSNFVDSPYKVYVGNLAKTVTSEML 198

Query: 55  KKAFSEKGSILSAKVVR 5
           KK FSEKG +L+AKV R
Sbjct: 199 KKCFSEKGQVLNAKVSR 215



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 35/74 (47%), Positives = 48/74 (64%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT+E L   FSE G V  A+V     T KS  F FVT S+ E+A+AA+  
Sbjct: 183 KVYVGNLAKTVTSEMLKKCFSEKGQVLNAKVSRVPGTSKSSGFGFVTFSSEEDAEAAISS 242

Query: 217 LNETEMGGRTIKVN 176
           LN + + G+ I+VN
Sbjct: 243 LNNSLLEGQRIRVN 256


>ref|XP_002314019.1| hypothetical protein POPTR_0009s07030g [Populus trichocarpa]
           gi|222850427|gb|EEE87974.1| hypothetical protein
           POPTR_0009s07030g [Populus trichocarpa]
          Length = 255

 Score =  172 bits (436), Expect = 1e-40
 Identities = 87/135 (64%), Positives = 110/135 (81%), Gaps = 3/135 (2%)
 Frame = -1

Query: 400 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVE 221
           R++YVGNIPR++TNEEL  +  E G V+KAEVMYDKY+ +SRRFAFVTM T E+A AA+E
Sbjct: 79  RRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANAAIE 138

Query: 220 KLNETEMGGRTIKVNISEKP---LDLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKK 50
           KLN TE+GGR IKVNI+EKP   LDL  L++  E  F+DSP+KVYVGN+++TV T+TLK 
Sbjct: 139 KLNGTEIGGREIKVNITEKPLQSLDLPSLQSD-ESQFVDSPYKVYVGNLAKTVATDTLKN 197

Query: 49  AFSEKGSILSAKVVR 5
            FS+KG++LSAKV R
Sbjct: 198 FFSKKGNVLSAKVSR 212



 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 29/74 (39%), Positives = 43/74 (58%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++V  + L   FS+ G V  A+V     T KS  F FVT S+ E+ + A+  
Sbjct: 180 KVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISS 239

Query: 217 LNETEMGGRTIKVN 176
            N + + G+ I+VN
Sbjct: 240 FNNSLLEGQPIRVN 253


>gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score =  172 bits (435), Expect = 2e-40
 Identities = 87/135 (64%), Positives = 110/135 (81%), Gaps = 3/135 (2%)
 Frame = -1

Query: 400 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVE 221
           R++YVGNIPR++TNEEL  +  E G V+KAEVMYDKY+ +SRRFAFVTM T E+A AA+E
Sbjct: 79  RRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANAAIE 138

Query: 220 KLNETEMGGRTIKVNISEKP---LDLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKK 50
           KLN TE+GGR IKVNI+EKP   LDL  L++  E  F+DSP+KVYVGN+++TV T+TLK 
Sbjct: 139 KLNGTEIGGREIKVNITEKPLQSLDLPSLQSD-ETQFVDSPYKVYVGNLAKTVATDTLKN 197

Query: 49  AFSEKGSILSAKVVR 5
            FS+KG++LSAKV R
Sbjct: 198 FFSKKGNVLSAKVSR 212



 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 29/74 (39%), Positives = 43/74 (58%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++V  + L   FS+ G V  A+V     T KS  F FVT S+ E+ + A+  
Sbjct: 180 KVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISS 239

Query: 217 LNETEMGGRTIKVN 176
            N + + G+ I+VN
Sbjct: 240 FNNSLLEGQPIRVN 253


>ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
           gi|297736206|emb|CBI24844.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score =  171 bits (434), Expect = 2e-40
 Identities = 92/143 (64%), Positives = 115/143 (80%), Gaps = 4/143 (2%)
 Frame = -1

Query: 421 AKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVE 242
           A  ++  R++YVGNIPR++ + ELA +  E G V+KAEVMYDKY+ +SRRFAFVTM TVE
Sbjct: 63  ATSDVAARRLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVE 122

Query: 241 EAQAAVEKLNETEMGGRTIKVNISEKP---LDLSGLKAQTEEPFIDSPHKVYVGNISRTV 71
           +A AA+EKLN TE+GGR IKVNI+EKP   LD+S L+A+ E  FIDSPHKVYVGN++RTV
Sbjct: 123 DANAAIEKLNGTEIGGREIKVNITEKPLLTLDMSLLQAE-ESQFIDSPHKVYVGNLARTV 181

Query: 70  TTETLKKAFSEK-GSILSAKVVR 5
           TT+TL + FSEK G +LSAKV R
Sbjct: 182 TTDTLTQFFSEKGGKVLSAKVSR 204


>ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223547691|gb|EEF49184.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 256

 Score =  170 bits (431), Expect = 5e-40
 Identities = 86/135 (63%), Positives = 109/135 (80%), Gaps = 3/135 (2%)
 Frame = -1

Query: 400 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVE 221
           +++Y+GNIPR+V N+EL  +  E G V+KAEVMYDKY+ +SRRFAFVTM TVE+A A +E
Sbjct: 80  KRLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMRTVEDANAVIE 139

Query: 220 KLNETEMGGRTIKVNISEKPL---DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKK 50
           KLN T++GGR IKVNI+EKPL   DLS L+ + E  F+DSPHKVYVGN+++TVT+E LK 
Sbjct: 140 KLNGTQIGGREIKVNITEKPLASGDLSFLQLE-ESQFVDSPHKVYVGNLAKTVTSEILKN 198

Query: 49  AFSEKGSILSAKVVR 5
            FSEKG +LSAKV R
Sbjct: 199 FFSEKGKVLSAKVSR 213



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 31/74 (41%), Positives = 45/74 (60%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT+E L   FSE G V  A+V     T KS  + FV+ S  E+ +AA+  
Sbjct: 181 KVYVGNLAKTVTSEILKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEEDVEAAISS 240

Query: 217 LNETEMGGRTIKVN 176
            N + + G+ I+VN
Sbjct: 241 FNNSLLEGQKIRVN 254


>ref|XP_006660491.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Oryza
           brachyantha]
          Length = 243

 Score =  169 bits (429), Expect = 8e-40
 Identities = 88/140 (62%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
 Frame = -1

Query: 421 AKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVE 242
           A  E+  RK+YVGNIPR+VTN+ELA +F++ GTV +AEVMYDKYT +SRRF FVTMST E
Sbjct: 61  APEEVAARKLYVGNIPRTVTNDELAAMFADHGTVDRAEVMYDKYTGRSRRFGFVTMSTPE 120

Query: 241 EAQAAVEKLNETEMGGRTIKVNISEKPLDLSGLKAQTEEP-FIDSPHKVYVGNISRTVTT 65
           EA AA+E LNETE+GGR IKVN++E  L      A   EP F+DS +KVYVGN++++VTT
Sbjct: 121 EANAAIESLNETEVGGRKIKVNVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKSVTT 180

Query: 64  ETLKKAFSEKGSILSAKVVR 5
           E LK  FSEKG +LSA V R
Sbjct: 181 EMLKNFFSEKGQVLSATVSR 200



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 36/74 (48%), Positives = 46/74 (62%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ +SVT E L   FSE G V  A V     T KS+ + FVT S+ EE +AAV  
Sbjct: 168 KVYVGNLAKSVTTEMLKNFFSEKGQVLSATVSRIPGTSKSKGYGFVTFSSDEEVEAAVST 227

Query: 217 LNETEMGGRTIKVN 176
            N+ E+ G+ I+VN
Sbjct: 228 FNDAELEGQPIRVN 241


>ref|XP_004956457.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like isoform X2
           [Setaria italica]
          Length = 244

 Score =  169 bits (429), Expect = 8e-40
 Identities = 88/138 (63%), Positives = 107/138 (77%), Gaps = 1/138 (0%)
 Frame = -1

Query: 421 AKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVE 242
           A  E+  RK+YVGNIPR+VTN+EL  +F+  GTV++AEVMYDKYT +SRRF FVTMSTVE
Sbjct: 62  APAEVAARKLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTVE 121

Query: 241 EAQAAVEKLNETEMGGRTIKVNISEKPLDLSGLKAQTEEP-FIDSPHKVYVGNISRTVTT 65
           EA AA+E LNETE+GGR IKVN++E  L      A   EP F+DS +KVYVGN+++TVTT
Sbjct: 122 EANAAIEALNETEVGGRKIKVNVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKTVTT 181

Query: 64  ETLKKAFSEKGSILSAKV 11
           E LK  F+EKG ILSA V
Sbjct: 182 EVLKNFFAEKGQILSATV 199



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 33/74 (44%), Positives = 46/74 (62%)
 Frame = -1

Query: 397 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFAFVTMSTVEEAQAAVEK 218
           KVYVGN+ ++VT E L   F+E G +  A V +   T KS+ + FVT S+ EE +AAV  
Sbjct: 169 KVYVGNLAKTVTTEVLKNFFAEKGQILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVAT 228

Query: 217 LNETEMGGRTIKVN 176
            N  E+ G+ I+VN
Sbjct: 229 FNNAELEGQPIRVN 242