BLASTX nr result

ID: Ephedra27_contig00003400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00003400
         (517 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76935.1| unknown [Picea sitchensis]                              59   5e-07
ref|XP_002308522.1| YGGT family protein [Populus trichocarpa] gi...    57   3e-06
ref|NP_001150770.1| YGGT family protein [Zea mays] gi|195641708|...    56   4e-06
ref|XP_004985502.1| PREDICTED: uncharacterized protein LOC101785...    55   7e-06
ref|XP_004303461.1| PREDICTED: uncharacterized protein LOC101299...    55   1e-05

>gb|ADE76935.1| unknown [Picea sitchensis]
          Length = 253

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/60 (50%), Positives = 45/60 (75%)
 Frame = -3

Query: 515 GGSIDLSPILAFVVLNAVTSTATALPAEMPKNSEIATFDASISSECAPPPVRQNNYLKKK 336
           GG++DLSPI+AF +LNAVTS A+ALPAE+PK +E     AS+ S+ +   ++Q  +LK++
Sbjct: 180 GGTLDLSPIIAFFLLNAVTSAASALPAELPKGAESKGGLASMPSQYSKLSMQQKLWLKRQ 239


>ref|XP_002308522.1| YGGT family protein [Populus trichocarpa]
           gi|222854498|gb|EEE92045.1| YGGT family protein [Populus
           trichocarpa]
          Length = 252

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = -3

Query: 515 GGSIDLSPILAFVVLNAVTSTATALPAEMPKN 420
           GG++DLSPILAF+VLNA TSTATALPAE+P+N
Sbjct: 182 GGTLDLSPILAFLVLNAFTSTATALPAELPEN 213


>ref|NP_001150770.1| YGGT family protein [Zea mays] gi|195641708|gb|ACG40322.1| YGGT
           family protein [Zea mays] gi|414865122|tpg|DAA43679.1|
           TPA: YGGT family protein [Zea mays]
          Length = 236

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = -3

Query: 515 GGSIDLSPILAFVVLNAVTSTATALPAEMPKNSEIATFD-ASISSECAPPPVRQNNYLKK 339
           GG++DLSPILAF+VLNA TSTA ALPAE+P ++        + SS  A P   Q  ++++
Sbjct: 164 GGTLDLSPILAFLVLNAFTSTAAALPAELPSSAAAQHHQRTAASSSSATPSPNQRKWMRR 223


>ref|XP_004985502.1| PREDICTED: uncharacterized protein LOC101785923 [Setaria italica]
          Length = 240

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
 Frame = -3

Query: 515 GGSIDLSPILAFVVLNAVTSTATALPAEMPKNS---EIATFDASISSECAPPPVRQNNYL 345
           GG++DLSPILAF+VLNA TSTA ALPAE+P ++   E     ++ +S C+ P     N  
Sbjct: 164 GGTLDLSPILAFLVLNAFTSTAAALPAELPDSAAAPEHHRHSSAATSSCSAPLDLTANQR 223

Query: 344 KKKGFGNWRS*KSDRRHQG 288
           K      W      R+ QG
Sbjct: 224 K------WMQRMQSRKSQG 236


>ref|XP_004303461.1| PREDICTED: uncharacterized protein LOC101299599 [Fragaria vesca
           subsp. vesca]
          Length = 245

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/60 (55%), Positives = 42/60 (70%)
 Frame = -3

Query: 515 GGSIDLSPILAFVVLNAVTSTATALPAEMPKNSEIATFDASISSECAPPPVRQNNYLKKK 336
           GG++DLSPILAF+VLNA TSTA ALPAE+P +S  A+ +   SS    P + Q   L+KK
Sbjct: 178 GGTLDLSPILAFLVLNAFTSTAAALPAELPASS-AASQELGASS---TPGITQLTTLQKK 233


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