BLASTX nr result
ID: Ephedra27_contig00003400
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00003400 (517 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADE76935.1| unknown [Picea sitchensis] 59 5e-07 ref|XP_002308522.1| YGGT family protein [Populus trichocarpa] gi... 57 3e-06 ref|NP_001150770.1| YGGT family protein [Zea mays] gi|195641708|... 56 4e-06 ref|XP_004985502.1| PREDICTED: uncharacterized protein LOC101785... 55 7e-06 ref|XP_004303461.1| PREDICTED: uncharacterized protein LOC101299... 55 1e-05 >gb|ADE76935.1| unknown [Picea sitchensis] Length = 253 Score = 59.3 bits (142), Expect = 5e-07 Identities = 30/60 (50%), Positives = 45/60 (75%) Frame = -3 Query: 515 GGSIDLSPILAFVVLNAVTSTATALPAEMPKNSEIATFDASISSECAPPPVRQNNYLKKK 336 GG++DLSPI+AF +LNAVTS A+ALPAE+PK +E AS+ S+ + ++Q +LK++ Sbjct: 180 GGTLDLSPIIAFFLLNAVTSAASALPAELPKGAESKGGLASMPSQYSKLSMQQKLWLKRQ 239 >ref|XP_002308522.1| YGGT family protein [Populus trichocarpa] gi|222854498|gb|EEE92045.1| YGGT family protein [Populus trichocarpa] Length = 252 Score = 56.6 bits (135), Expect = 3e-06 Identities = 26/32 (81%), Positives = 31/32 (96%) Frame = -3 Query: 515 GGSIDLSPILAFVVLNAVTSTATALPAEMPKN 420 GG++DLSPILAF+VLNA TSTATALPAE+P+N Sbjct: 182 GGTLDLSPILAFLVLNAFTSTATALPAELPEN 213 >ref|NP_001150770.1| YGGT family protein [Zea mays] gi|195641708|gb|ACG40322.1| YGGT family protein [Zea mays] gi|414865122|tpg|DAA43679.1| TPA: YGGT family protein [Zea mays] Length = 236 Score = 56.2 bits (134), Expect = 4e-06 Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%) Frame = -3 Query: 515 GGSIDLSPILAFVVLNAVTSTATALPAEMPKNSEIATFD-ASISSECAPPPVRQNNYLKK 339 GG++DLSPILAF+VLNA TSTA ALPAE+P ++ + SS A P Q ++++ Sbjct: 164 GGTLDLSPILAFLVLNAFTSTAAALPAELPSSAAAQHHQRTAASSSSATPSPNQRKWMRR 223 >ref|XP_004985502.1| PREDICTED: uncharacterized protein LOC101785923 [Setaria italica] Length = 240 Score = 55.5 bits (132), Expect = 7e-06 Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%) Frame = -3 Query: 515 GGSIDLSPILAFVVLNAVTSTATALPAEMPKNS---EIATFDASISSECAPPPVRQNNYL 345 GG++DLSPILAF+VLNA TSTA ALPAE+P ++ E ++ +S C+ P N Sbjct: 164 GGTLDLSPILAFLVLNAFTSTAAALPAELPDSAAAPEHHRHSSAATSSCSAPLDLTANQR 223 Query: 344 KKKGFGNWRS*KSDRRHQG 288 K W R+ QG Sbjct: 224 K------WMQRMQSRKSQG 236 >ref|XP_004303461.1| PREDICTED: uncharacterized protein LOC101299599 [Fragaria vesca subsp. vesca] Length = 245 Score = 55.1 bits (131), Expect = 1e-05 Identities = 33/60 (55%), Positives = 42/60 (70%) Frame = -3 Query: 515 GGSIDLSPILAFVVLNAVTSTATALPAEMPKNSEIATFDASISSECAPPPVRQNNYLKKK 336 GG++DLSPILAF+VLNA TSTA ALPAE+P +S A+ + SS P + Q L+KK Sbjct: 178 GGTLDLSPILAFLVLNAFTSTAAALPAELPASS-AASQELGASS---TPGITQLTTLQKK 233