BLASTX nr result

ID: Ephedra27_contig00003030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00003030
         (1891 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002295666.1| predicted protein [Thalassiosira pseudonana ...    62   7e-07
gb|EJK50256.1| hypothetical protein THAOC_30800, partial [Thalas...    60   3e-06
ref|XP_002288130.1| predicted protein [Thalassiosira pseudonana ...    60   4e-06

>ref|XP_002295666.1| predicted protein [Thalassiosira pseudonana CCMP1335]
            gi|209585698|gb|ACI64383.1| predicted protein
            [Thalassiosira pseudonana CCMP1335]
          Length = 3283

 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 98/468 (20%), Positives = 181/468 (38%), Gaps = 19/468 (4%)
 Frame = +3

Query: 465  QSSTYKDSCQSNYGPGSSRPPRLTKVRRN-LNIPTVKPTLRNIPTVKPPLRNDTKSEKDE 641
            Q +T      S+ G  +S+P  L     N    P+  P+    PT  P        +   
Sbjct: 1711 QPTTQPSILPSDSGVPTSQPSDLPSTSGNPTTTPSSSPSSSGRPTTMPSDSPSLSGKPSS 1770

Query: 642  LPSKFKNWD--PFLSSSDNEELRSRINSW---SPFTDGFKAEDVKNGVAFTFKGNAGAEN 806
             PS   +    P  + SD+  L  + +S    SP   G  A    +  + +  G   ++ 
Sbjct: 1771 APSDSPSLSGQPSSAPSDSPSLSGKPSSAPSDSPSLSGKPASAPSDSPSAS--GAPTSQP 1828

Query: 807  NSTLKEINPNVSLKSDSASFDNHGRSLFGDE-NHDEMGARSKMWNPFVNGKHHEAGESAV 983
            + +  +     ++ SDS S      S   D  +     + +   +P ++GK   A   + 
Sbjct: 1829 SDSPSQSGQTTTMPSDSPSLSGKPSSAPSDSPSLSGQPSSAPSDSPSLSGKPSSAPSDS- 1887

Query: 984  PSQGGFAFSVGTESKDYVRRRQKQNLQRRMGVNDSGETSKVQNVKMNDNVHGDNPCVSKG 1163
            PS  G   S  ++S                G   S  +           +  D+P +S  
Sbjct: 1888 PSLSGKPSSAPSDSPS------------ASGAPTSQPSDSPSQSGQPTTMPSDSPSLSGK 1935

Query: 1164 PHSGLADNPSVNKMPHSGMADNPSVNRMPHAALADNPNVNKMPADNPFVNKMPADNPFVN 1343
            P S  +D+PS++  P S  +D+PS++  P +A +D+P+++  P+  P +  +P+ + +  
Sbjct: 1936 PSSAPSDSPSLSGQPSSAPSDSPSLSGKPSSAPSDSPSLSGKPSLQPSI--LPSASGYPT 1993

Query: 1344 KMP-----HSGLVAEEKMESSLKFTFGLGTPKQSHSTHA--TDKAATVANKGTQSYVFSA 1502
             MP      SG    E  +S         +P  + ST    + + + + +   +     +
Sbjct: 1994 SMPSSIPSSSGNPTTEPSDSPSLSGHPSSSPSDNPSTSGAPSSQPSDIPSFSGKPSNSPS 2053

Query: 1503 GTSGVFSQPSVSQTLKPENSSGNVNSWPFMGSLSSSLNQIFAFSSNEDAETKNLSRKKRE 1682
             +  + +QPS SQ     +SSG  +S P     SS +       S++ +++ +LS +   
Sbjct: 2054 DSPTLSAQPS-SQPSSAPSSSGAPSSHPSSSPSSSGM------PSSQPSDSPSLSSQPSS 2106

Query: 1683 KCQIHSSIRGK-----HGRPSTTPKPQRQKVSAVTNQSEEGSPMDCSP 1811
               +  SI G+        PS +  P  Q   A +  S+  S    SP
Sbjct: 2107 APSVSPSISGQPSSSPSDSPSASSAPSSQPSQAPSGSSKPSSSPSLSP 2154


>gb|EJK50256.1| hypothetical protein THAOC_30800, partial [Thalassiosira oceanica]
          Length = 1175

 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 96/470 (20%), Positives = 177/470 (37%), Gaps = 70/470 (14%)
 Frame = +3

Query: 456  NYNQSSTYKDSCQSNYGPGSSRPPRLTKVRRNLNIPTVKPTLRNIPTVKPPLRNDTKSEK 635
            +Y  S +   S Q + GP  S  P         + P+  P++   P+ +P +   +    
Sbjct: 6    SYGPSISSAPSSQPSQGPSVSTEPS--------SQPSQGPSISTAPSSQPSMNPTSTGNP 57

Query: 636  DELPSKFKNWDPFLSSSDNEELRSRINSWSPFTDGFKAEDVKNGVAFTFKGN-------- 791
              +PS+        S S ++E  S + S SP T G  +     G + + + +        
Sbjct: 58   TSMPSE--------SPSVSQE-PSSMPSMSPSTSGAPSSQPSEGPSVSTEPSHAPSDSPS 108

Query: 792  -AGAENNSTLKE----INPNVSLKSDSASFDNHGRSLFGDENHDEMGARSKMW------- 935
             +GA ++S  +       P++S    S   DN   S     +   M   +  W       
Sbjct: 109  VSGAPSSSPSESPSISAQPSISTMPSSQPSDNPSTST-EPSSSPSMNPSASQWPTSLPSE 167

Query: 936  NPFVNGKHHEAGE-----SAVPSQGGFAFSVGTESKDYVRRRQKQNLQRRMGVNDSGETS 1100
            +P ++ +   + E     S VPS   +  S+ +ES          +       N S  TS
Sbjct: 168  SPSISTRPSVSTEPSSQPSMVPSASQWPTSLPSESPSI-----STSPSSSPSANPSVSTS 222

Query: 1101 KVQNVKMNDNVHG-----------------------------------DNPCVSKGPHSG 1175
                  MN ++ G                                   ++P +S  P S 
Sbjct: 223  PSSQPSMNPSLSGQPSSTPSESPSVSGMPSSQPSMSPTSTGNPTSVPSESPSISTSPSSQ 282

Query: 1176 LADNPSVNKMPHSGMADNPSVNRMPHAALADNPNVNKMPADNPFVN--------KMPADN 1331
             ++NPS +  P S  +  PSV+  P ++ +++P+V+ MP+  P  N          P+++
Sbjct: 283  PSENPSTSTAPSSQPSQGPSVSAAPSSSPSESPSVSGMPSSQPSANPTTTGNPTSTPSES 342

Query: 1332 PFVNKMPHSGLVAEEKMESSLKFTFGLGTPKQS-HSTHATDKAATVANKGTQSYVFSAGT 1508
            P V+  P S + +E    S +  +     P  + + T    ++ +V+ + + S   S  T
Sbjct: 343  PSVSGQP-SSMPSENPSVSGMPSSQPSANPTSTGNPTSTPSESPSVSQEPSSSPSMSPST 401

Query: 1509 SGV-FSQPSVSQTLKPENSSGNVNSWPFMGSLSSSLNQIFAFSSNEDAET 1655
            SG   S PS   ++  + S    +S    G+ SSS ++  + S+     T
Sbjct: 402  SGAPSSHPSEGPSVSAKPSHAPSDSPSVSGAPSSSPSESPSISAQPSIST 451


>ref|XP_002288130.1| predicted protein [Thalassiosira pseudonana CCMP1335]
            gi|220977246|gb|EED95573.1| predicted protein
            [Thalassiosira pseudonana CCMP1335]
          Length = 4505

 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 103/473 (21%), Positives = 188/473 (39%), Gaps = 23/473 (4%)
 Frame = +3

Query: 447  PVFNYNQSSTYKDSCQSNYGPGSSRPPRLTKVRRNLNIPTVKPTLR----NIPTVKPPLR 614
            P  +   SS   DS  ++  P S      ++  +   +P+  P+L     + P+  P L 
Sbjct: 2304 PSLSGKPSSAPSDSPSASGAPTSQPSDSPSQSGQPTTMPSDSPSLSGKPSSAPSDSPSLS 2363

Query: 615  NDTKSEKDELPSKFKNWDPFLSSSDNEELRSRINSWSPFTDGFKAEDVKNGVAFTFKGNA 794
                S   + PS   +  P  + SD+  L  + +S +P +D   A              +
Sbjct: 2364 GQPSSAPSDSPSL--SGKPSSAPSDSPSLSGKPSS-AP-SDSPSASGAPTSQPSDSPSQS 2419

Query: 795  GAENNSTLKEINPNVSLKSDSASFDNHGRSLFGDENHDEMGARSKMWNPFVNGKHHEAGE 974
            G    +T+   +P++S K  SA  D+   SL G  +     +      P ++GK   A  
Sbjct: 2420 GQP--TTMPSDSPSLSGKPSSAPSDSP--SLSGQPSSAPSDS------PSLSGKPSSAPS 2469

Query: 975  SAVPSQGGFAFSVGTESKDY--VRRRQKQNLQRRMGVNDSGETSKVQNVKMNDNVHGDNP 1148
             + PS  G   S  ++S         Q  +   + G   +  +          +   D+P
Sbjct: 2470 DS-PSLSGKPSSAPSDSPSASGAPTSQPSDSPSQSGQPTTMPSDSPSLSGKPSSAPSDSP 2528

Query: 1149 CVSKGPHSGLADNPSVNKMPHSGMADNPSVNRMPHAALADNPNVN----KMPADNPFVN- 1313
             +S  P S  +D+PS++  P S  +D+PS++  P +A +DNP+ +      P+D+P  + 
Sbjct: 2529 SLSGQPSSAPSDSPSLSGKPSSAPSDSPSLSGKPSSAPSDNPSASGAPTSQPSDSPSQSG 2588

Query: 1314 ---KMPADNPFVNKMPHSGLVAEEKMESSLKFTFGLGTPKQSHSTHATDKAATVANKGTQ 1484
                MP+D+P ++  P S       +                  + A   + +++ K + 
Sbjct: 2589 QPTTMPSDSPSLSGKPSSAPSDSPSLSGQPSSAPSDSPSLSGKPSSAPSDSPSLSGKPSS 2648

Query: 1485 SYVFSAGTSGV-FSQPSVSQTLKPENSSGNVNSWPFMGSLSSSLNQIFAFS---SNEDAE 1652
            +   +   SG   SQPS S +   + ++   +S    G  SS+ +   + S   S+  ++
Sbjct: 2649 APSDNPSASGAPTSQPSDSPSQSGQPTTMPSDSPSLSGKPSSAPSDSPSLSGQPSSAPSD 2708

Query: 1653 TKNLSRKKREKCQIHSSIRGKHGRPSTTPKPQRQKVSAVTNQ-----SEEGSP 1796
            + +LS K         S+ GK   PS+ P        A T+Q     S+ G P
Sbjct: 2709 SPSLSGKPSSAPSDSPSLSGK---PSSAPSDSPSASGAPTSQPSDSPSQSGQP 2758



 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 103/473 (21%), Positives = 188/473 (39%), Gaps = 23/473 (4%)
 Frame = +3

Query: 447  PVFNYNQSSTYKDSCQSNYGPGSSRPPRLTKVRRNLNIPTVKPTLR----NIPTVKPPLR 614
            P  +   SS   D+  ++  P S      ++  +   +P+  P+L     + P+  P L 
Sbjct: 2556 PSLSGKPSSAPSDNPSASGAPTSQPSDSPSQSGQPTTMPSDSPSLSGKPSSAPSDSPSLS 2615

Query: 615  NDTKSEKDELPSKFKNWDPFLSSSDNEELRSRINSWSPFTDGFKAEDVKNGVAFTFKGNA 794
                S   + PS   +  P  + SD+  L  + +S +P +D   A              +
Sbjct: 2616 GQPSSAPSDSPSL--SGKPSSAPSDSPSLSGKPSS-AP-SDNPSASGAPTSQPSDSPSQS 2671

Query: 795  GAENNSTLKEINPNVSLKSDSASFDNHGRSLFGDENHDEMGARSKMWNPFVNGKHHEAGE 974
            G    +T+   +P++S K  SA  D+   SL G  +     +      P ++GK   A  
Sbjct: 2672 GQP--TTMPSDSPSLSGKPSSAPSDSP--SLSGQPSSAPSDS------PSLSGKPSSAPS 2721

Query: 975  SAVPSQGGFAFSVGTESKDY--VRRRQKQNLQRRMGVNDSGETSKVQNVKMNDNVHGDNP 1148
             + PS  G   S  ++S         Q  +   + G   +  +          +   D+P
Sbjct: 2722 DS-PSLSGKPSSAPSDSPSASGAPTSQPSDSPSQSGQPTTMPSDSPSLSGKPSSAPSDSP 2780

Query: 1149 CVSKGPHSGLADNPSVNKMPHSGMADNPSVNRMPHAALADNPNVN----KMPADNPFVN- 1313
             +S  P S  +D+PS++  P S  +D+PS++  P +A +DNP+ +      P+D+P  + 
Sbjct: 2781 SLSGQPSSAPSDSPSLSGKPSSAPSDSPSLSGKPSSAPSDNPSASGAPTSQPSDSPSQSG 2840

Query: 1314 ---KMPADNPFVNKMPHSGLVAEEKMESSLKFTFGLGTPKQSHSTHATDKAATVANKGTQ 1484
                MP+D+P ++  P S       +                  + A   + +++ K + 
Sbjct: 2841 QPTTMPSDSPSLSGKPSSAPSDSPSLSGQPSSAPSDSPSLSGKPSSAPSDSPSLSGKPSS 2900

Query: 1485 SYVFSAGTSGV-FSQPSVSQTLKPENSSGNVNSWPFMGSLSSSLNQIFAFS---SNEDAE 1652
            +   S   SG   SQPS S +   + ++   +S    G  SS+ +   + S   S+  ++
Sbjct: 2901 APSDSPSASGAPTSQPSDSPSQSGQPTTMPSDSPSLSGKPSSAPSDSPSLSGQPSSAPSD 2960

Query: 1653 TKNLSRKKREKCQIHSSIRGKHGRPSTTPKPQRQKVSAVTNQ-----SEEGSP 1796
            + +LS K         S+ GK   PS+ P        A T+Q     S+ G P
Sbjct: 2961 SPSLSGKPSSAPSDSPSLSGK---PSSAPSDNPSASGAPTSQPSDSPSQSGQP 3010



 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 103/473 (21%), Positives = 188/473 (39%), Gaps = 23/473 (4%)
 Frame = +3

Query: 447  PVFNYNQSSTYKDSCQSNYGPGSSRPPRLTKVRRNLNIPTVKPTLR----NIPTVKPPLR 614
            P  +   SS   D+  ++  P S      ++  +   +P+  P+L     + P+  P L 
Sbjct: 2808 PSLSGKPSSAPSDNPSASGAPTSQPSDSPSQSGQPTTMPSDSPSLSGKPSSAPSDSPSLS 2867

Query: 615  NDTKSEKDELPSKFKNWDPFLSSSDNEELRSRINSWSPFTDGFKAEDVKNGVAFTFKGNA 794
                S   + PS   +  P  + SD+  L  + +S +P +D   A              +
Sbjct: 2868 GQPSSAPSDSPSL--SGKPSSAPSDSPSLSGKPSS-AP-SDSPSASGAPTSQPSDSPSQS 2923

Query: 795  GAENNSTLKEINPNVSLKSDSASFDNHGRSLFGDENHDEMGARSKMWNPFVNGKHHEAGE 974
            G    +T+   +P++S K  SA  D+   SL G  +     +      P ++GK   A  
Sbjct: 2924 GQP--TTMPSDSPSLSGKPSSAPSDSP--SLSGQPSSAPSDS------PSLSGKPSSAPS 2973

Query: 975  SAVPSQGGFAFSVGTE--SKDYVRRRQKQNLQRRMGVNDSGETSKVQNVKMNDNVHGDNP 1148
             + PS  G   S  ++  S       Q  +   + G   +  +          +   D+P
Sbjct: 2974 DS-PSLSGKPSSAPSDNPSASGAPTSQPSDSPSQSGQPTTMPSDSPSLSGKPSSAPSDSP 3032

Query: 1149 CVSKGPHSGLADNPSVNKMPHSGMADNPSVNRMPHAALADNPNVN----KMPADNPFVN- 1313
             +S  P S  +D+PS++  P S  +D+PS++  P +A +DNP+ +      P+D+P  + 
Sbjct: 3033 SLSGQPSSAPSDSPSLSGKPSSAPSDSPSLSGKPSSAPSDNPSASGAPTSQPSDSPSQSG 3092

Query: 1314 ---KMPADNPFVNKMPHSGLVAEEKMESSLKFTFGLGTPKQSHSTHATDKAATVANKGTQ 1484
                MP+D+P ++  P S       +                  + A   + +++ K + 
Sbjct: 3093 QPTTMPSDSPSLSGKPSSAPSDSPSLSGQPSSAPSDSPSLSGKPSSAPSDSPSLSGKPSS 3152

Query: 1485 SYVFSAGTSGV-FSQPSVSQTLKPENSSGNVNSWPFMGSLSSSLNQIFAFS---SNEDAE 1652
            +   S   SG   SQPS S +   + ++   +S    G  SS+ +   + S   S+  ++
Sbjct: 3153 APSDSPSASGAPTSQPSDSPSQSGQPTTMPSDSPSLSGKPSSAPSDSPSLSGQPSSAPSD 3212

Query: 1653 TKNLSRKKREKCQIHSSIRGKHGRPSTTPKPQRQKVSAVTNQ-----SEEGSP 1796
            + +LS K         S+ GK   PS+ P        A T+Q     S+ G P
Sbjct: 3213 SPSLSGKPSSAPSDSPSLSGK---PSSAPSDSPSASGAPTSQPSDSPSQSGQP 3262


Top