BLASTX nr result

ID: Ephedra27_contig00002397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00002397
         (819 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26173.1| unknown [Picea sitchensis]                              90   1e-15
ref|XP_006853728.1| hypothetical protein AMTR_s00056p00165600 [A...    64   5e-08
ref|XP_004172680.1| PREDICTED: probable inactive poly [ADP-ribos...    59   2e-06
ref|XP_004508868.1| PREDICTED: probable inactive poly [ADP-ribos...    58   5e-06

>gb|ABK26173.1| unknown [Picea sitchensis]
          Length = 259

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 44/75 (58%), Positives = 58/75 (77%)
 Frame = +1

Query: 88  KGSKGMHVSPLMSFQRLFSVIRKSLPGVYMNLLERVYADYRGGKVGKDALIKEVRVIAGD 267
           KGS  +  +  MSF +LFSVIRKSLP  YMN LE +YA Y+ GK+GKD +I++VR+I GD
Sbjct: 76  KGSTQIPCAASMSFPKLFSVIRKSLPTAYMNTLEHLYAQYKAGKIGKDIIIRKVRMIVGD 135

Query: 268 KLLMSAIQSIQKTTE 312
           KLL++AIQSI+  T+
Sbjct: 136 KLLIAAIQSIRGQTK 150


>ref|XP_006853728.1| hypothetical protein AMTR_s00056p00165600 [Amborella trichopoda]
           gi|548857389|gb|ERN15195.1| hypothetical protein
           AMTR_s00056p00165600 [Amborella trichopoda]
          Length = 732

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
 Frame = +1

Query: 73  HNIHEKGSKGMHVSPL------MSFQRLFSVIRKSLPGVYMNLLERVYADYRGGKVGKDA 234
           H + E   +    SPL      MSF  LFSVI K L    +  LE +Y +++ GK+GKD 
Sbjct: 641 HMLTEANGQSPKTSPLLGGTSKMSFPTLFSVIGKYLSPSTVGTLEHLYNEFKAGKIGKDT 700

Query: 235 LIKEVRVIAGDKLLMSAIQSIQ 300
           LI +VR IAGDK+L++AI SI+
Sbjct: 701 LIGKVRSIAGDKVLIAAINSIR 722


>ref|XP_004172680.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5-like
           [Cucumis sativus]
          Length = 388

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 31/78 (39%), Positives = 45/78 (57%)
 Frame = +1

Query: 103 MHVSPLMSFQRLFSVIRKSLPGVYMNLLERVYADYRGGKVGKDALIKEVRVIAGDKLLMS 282
           M  SP M F  L SV+ K LP   + ++ + + D+R  K+ +  LIK VR+IAGDKLL+ 
Sbjct: 287 MPTSPWMPFPSLISVLSKYLPAPEIAMITKYHKDHRDHKISRHELIKRVRLIAGDKLLIH 346

Query: 283 AIQSIQKTTESGSFNKEG 336
            I+S +    +G    EG
Sbjct: 347 VIKSFRTQESNGDVGFEG 364


>ref|XP_004508868.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5-like
           [Cicer arietinum]
          Length = 324

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 31/75 (41%), Positives = 46/75 (61%)
 Frame = +1

Query: 112 SPLMSFQRLFSVIRKSLPGVYMNLLERVYADYRGGKVGKDALIKEVRVIAGDKLLMSAIQ 291
           SP M F  LFSV+ K LP   +  + + + +YR  K+ +  LI++VR+IAGDKLL+S I+
Sbjct: 243 SPWMPFPALFSVLSKILPPSDIGFIAKFHKEYREKKILRHELIQKVRLIAGDKLLVSVIK 302

Query: 292 SIQKTTESGSFNKEG 336
           S +      SF + G
Sbjct: 303 SFRAKKLPASFKQTG 317


Top