BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00002266
         (426 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMC82419.1| hypothetical protein A306_09606, partial [Columba...    58   1e-06

>gb|EMC82419.1| hypothetical protein A306_09606, partial [Columba livia]
          Length = 310

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/130 (26%), Positives = 44/130 (33%)
 Frame = -3

Query: 424 HRDSLTTKCRWRTYNIPSHHDSLTIPSHRDSLTTKCWWRTYSIPSHRDSLTIPSHRDSLT 245
           H  +    C  RT   P HH +   P H  +    C  RT   P H  +   P H  +  
Sbjct: 1   HHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAG 60

Query: 244 TKCWWRTYSIPSHRDSLTIPSHRDSLTTKCWWRWRKTYNIPSHYDSLTIPSHGDLLTTEC 65
             C  RT   P H  +   P H  +    C  R   T   P H+ +   P H       C
Sbjct: 61  CPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHR---TAGCPCHHRTAGCPCHHRTAGCPC 117

Query: 64  GWRTYNIPSH 35
             RT   P H
Sbjct: 118 HHRTAGCPCH 127



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/130 (26%), Positives = 44/130 (33%)
 Frame = -3

Query: 424 HRDSLTTKCRWRTYNIPSHHDSLTIPSHRDSLTTKCWWRTYSIPSHRDSLTIPSHRDSLT 245
           H  +    C  RT   P HH +   P H  +    C  RT   P H  +   P H  +  
Sbjct: 37  HHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAG 96

Query: 244 TKCWWRTYSIPSHRDSLTIPSHRDSLTTKCWWRWRKTYNIPSHYDSLTIPSHGDLLTTEC 65
             C  RT   P H  +   P H  +    C  R   T   P H+ +   P H       C
Sbjct: 97  CPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHR---TAGCPCHHRTAGCPCHHRTAGCPC 153

Query: 64  GWRTYNIPSH 35
             RT   P H
Sbjct: 154 HHRTAGCPCH 163



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/130 (26%), Positives = 44/130 (33%)
 Frame = -3

Query: 424 HRDSLTTKCRWRTYNIPSHHDSLTIPSHRDSLTTKCWWRTYSIPSHRDSLTIPSHRDSLT 245
           H  +    C  RT   P HH +   P H  +    C  RT   P H  +   P H  +  
Sbjct: 73  HHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAG 132

Query: 244 TKCWWRTYSIPSHRDSLTIPSHRDSLTTKCWWRWRKTYNIPSHYDSLTIPSHGDLLTTEC 65
             C  RT   P H  +   P H  +    C  R   T   P H+ +   P H       C
Sbjct: 133 CPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHR---TAGCPCHHRTAGCPCHHRTAGCPC 189

Query: 64  GWRTYNIPSH 35
             RT   P H
Sbjct: 190 HHRTAGCPCH 199



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/130 (26%), Positives = 44/130 (33%)
 Frame = -3

Query: 424 HRDSLTTKCRWRTYNIPSHHDSLTIPSHRDSLTTKCWWRTYSIPSHRDSLTIPSHRDSLT 245
           H  +    C  RT   P HH +   P H  +    C  RT   P H  +   P H  +  
Sbjct: 109 HHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAG 168

Query: 244 TKCWWRTYSIPSHRDSLTIPSHRDSLTTKCWWRWRKTYNIPSHYDSLTIPSHGDLLTTEC 65
             C  RT   P H  +   P H  +    C  R   T   P H+ +   P H       C
Sbjct: 169 CPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHR---TAGCPCHHRTAGCPCHHRTAGCPC 225

Query: 64  GWRTYNIPSH 35
             RT   P H
Sbjct: 226 HHRTAGCPCH 235



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/130 (26%), Positives = 44/130 (33%)
 Frame = -3

Query: 424 HRDSLTTKCRWRTYNIPSHHDSLTIPSHRDSLTTKCWWRTYSIPSHRDSLTIPSHRDSLT 245
           H  +    C  RT   P HH +   P H  +    C  RT   P H  +   P H  +  
Sbjct: 145 HHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAG 204

Query: 244 TKCWWRTYSIPSHRDSLTIPSHRDSLTTKCWWRWRKTYNIPSHYDSLTIPSHGDLLTTEC 65
             C  RT   P H  +   P H  +    C  R   T   P H+ +   P H       C
Sbjct: 205 CPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHR---TAGCPCHHRTAGCPCHHRTAGCPC 261

Query: 64  GWRTYNIPSH 35
             RT   P H
Sbjct: 262 HHRTAGCPCH 271



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/130 (26%), Positives = 44/130 (33%)
 Frame = -3

Query: 424 HRDSLTTKCRWRTYNIPSHHDSLTIPSHRDSLTTKCWWRTYSIPSHRDSLTIPSHRDSLT 245
           H  +    C  RT   P HH +   P H  +    C  RT   P H  +   P H  +  
Sbjct: 181 HHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHRTAG 240

Query: 244 TKCWWRTYSIPSHRDSLTIPSHRDSLTTKCWWRWRKTYNIPSHYDSLTIPSHGDLLTTEC 65
             C  RT   P H  +   P H  +    C  R   T   P H+ +   P H       C
Sbjct: 241 CPCHHRTAGCPCHHRTAGCPCHHRTAGCPCHHR---TAGCPCHHRTAGCPCHHRTAGCPC 297

Query: 64  GWRTYNIPSH 35
             RT   P H
Sbjct: 298 HHRTAGCPCH 307