BLASTX nr result
ID: Ephedra27_contig00002260
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00002260
(568 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006398352.1| hypothetical protein EUTSA_v10000815mg [Eutr... 138 9e-31
ref|NP_199470.1| pentatricopeptide repeat-containing protein [Ar... 137 2e-30
ref|XP_002863397.1| pentatricopeptide repeat-containing protein ... 136 4e-30
ref|XP_006281680.1| hypothetical protein CARUB_v10027819mg [Caps... 132 5e-29
ref|XP_006385629.1| hypothetical protein POPTR_0003s08800g [Popu... 132 8e-29
gb|EMJ11528.1| hypothetical protein PRUPE_ppa002049mg [Prunus pe... 131 1e-28
ref|XP_006352838.1| PREDICTED: pentatricopeptide repeat-containi... 130 3e-28
ref|XP_004245879.1| PREDICTED: pentatricopeptide repeat-containi... 129 5e-28
ref|XP_004300258.1| PREDICTED: pentatricopeptide repeat-containi... 128 9e-28
gb|EXB99769.1| hypothetical protein L484_023300 [Morus notabilis] 126 4e-27
gb|EOY24047.1| Pentatricopeptide (PPR) repeat-containing protein... 125 7e-27
ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containi... 125 7e-27
ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containi... 122 5e-26
ref|XP_006600892.1| PREDICTED: pentatricopeptide repeat-containi... 122 6e-26
ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containi... 122 6e-26
ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containi... 121 1e-25
ref|XP_006467283.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
ref|XP_006856269.1| hypothetical protein AMTR_s00047p00074820 [A... 120 2e-25
ref|XP_004293389.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
ref|XP_002519842.1| pentatricopeptide repeat-containing protein,... 120 2e-25
>ref|XP_006398352.1| hypothetical protein EUTSA_v10000815mg [Eutrema salsugineum]
gi|557099441|gb|ESQ39805.1| hypothetical protein
EUTSA_v10000815mg [Eutrema salsugineum]
Length = 642
Score = 138 bits (348), Expect = 9e-31
Identities = 72/189 (38%), Positives = 111/189 (58%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V DL ++G PD + CGCLL+V+ C+ ED K + CL++A+ L + V +L EK +
Sbjct: 426 VFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANQKLVTFVKLLVDEKTE 485
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
+ +++E+ +V+ ++ R FCN LID+ + +RAH+LL LG FG+YP L+ K+
Sbjct: 486 FETVKEEFKIVINETQVEARRPFCNCLIDICRGKKRHERAHELLYLGTLFGLYPGLHNKT 545
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSL 29
KEW L LS AA TA + W+++++N + EDLP F+ TG G H Q L
Sbjct: 546 VKEWSLDVRSLSVGAAETALEEWMRTLANIVRRQ--EDLPELFLAQTGTGTHRF--SQGL 601
Query: 28 SASLGSVLE 2
+ S S L+
Sbjct: 602 ANSFASHLQ 610
>ref|NP_199470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180372|sp|Q9LS25.1|PP420_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g46580, chloroplastic; Flags: Precursor
gi|8885599|dbj|BAA97529.1| unnamed protein product
[Arabidopsis thaliana] gi|332008017|gb|AED95400.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 711
Score = 137 bits (345), Expect = 2e-30
Identities = 67/172 (38%), Positives = 105/172 (61%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V DL K+G PD + CGCLL+V+ C+ ED K + CL++A+ L + V+++ EK +
Sbjct: 489 VFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTE 548
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
Y +++E+ +V+ ++ R FCN LID+ +RAH+LL LG FG+YP L+ K+
Sbjct: 549 YETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKT 608
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRH 53
KEW L LS AA TA + W+++++N ++ E+LP F+ TG G H
Sbjct: 609 IKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQ--EELPELFLAQTGTGTH 658
>ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297309232|gb|EFH39656.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 711
Score = 136 bits (342), Expect = 4e-30
Identities = 66/172 (38%), Positives = 106/172 (61%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V DL ++G PD + CGCLL+V+ C+ ED K + CL++A+ L + V+++ EK +
Sbjct: 489 VFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANRKLVTFVNLIVDEKTE 548
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
+ +++E+ +V+ ++ R FCN LID+ + +RAH+LL LG FG+YP L+ K+
Sbjct: 549 FETVKEEFKLVINATQVEARRPFCNCLIDICRGKKRHERAHELLYLGTLFGLYPGLHNKT 608
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRH 53
KEW L LS AA TA + W+++++N ++ EDLP F+ TG G H
Sbjct: 609 IKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQ--EDLPELFLAQTGTGTH 658
>ref|XP_006281680.1| hypothetical protein CARUB_v10027819mg [Capsella rubella]
gi|482550384|gb|EOA14578.1| hypothetical protein
CARUB_v10027819mg [Capsella rubella]
Length = 715
Score = 132 bits (333), Expect = 5e-29
Identities = 65/172 (37%), Positives = 103/172 (59%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V DL ++G PD + CGCLL+V+ C+ ED K + CL+KA+ L + V+++ E +
Sbjct: 494 VFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLEKANQKLVTFVNLIVDENTE 553
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
+ +++E+ +V+ ++ R FCN LID+ + +RAH+LL LG FG+YP L+ K+
Sbjct: 554 FETVKEEFKLVINATQVEARRPFCNCLIDICRGKKRHERAHELLYLGTLFGLYPGLHNKT 613
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRH 53
KEW L LS AA TA + W++++++ + EDLP F TG G H
Sbjct: 614 MKEWSLDVRSLSVGAAETALEEWMRTLASIIRRQ--EDLPDLFFAQTGTGTH 663
>ref|XP_006385629.1| hypothetical protein POPTR_0003s08800g [Populus trichocarpa]
gi|550342759|gb|ERP63426.1| hypothetical protein
POPTR_0003s08800g [Populus trichocarpa]
Length = 721
Score = 132 bits (331), Expect = 8e-29
Identities = 68/174 (39%), Positives = 106/174 (60%)
Frame = -1
Query: 532 DVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKIDYGSLEEKLGVVL 353
D +FCGCLL+V + CD+ ED +K L CLK+A+ L ++V +++ E+ + +L+E+ V+
Sbjct: 508 DDRFCGCLLSVASLCDESEDVAKVLACLKQANPRLVALVRLIEEEETSFETLKEEFRAVV 567
Query: 352 AGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKSPKEWCLQAVGLS 173
+G ++ R FCN LID+ + RAH+LL LG +G+YPDL+ K+ KEW L LS
Sbjct: 568 SGAVVETRRPFCNCLIDICRKRDLHGRAHELLYLGTLYGLYPDLHHKTVKEWSLDVRSLS 627
Query: 172 FHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSLSASLGS 11
AA TA + W+ +++ ++ E+LP F +TG G H Q L+ S S
Sbjct: 628 VGAAHTALEEWMGTLTKFVQ--RNEELPELFSAHTGSGTHKF--SQGLANSFDS 677
>gb|EMJ11528.1| hypothetical protein PRUPE_ppa002049mg [Prunus persica]
Length = 724
Score = 131 bits (329), Expect = 1e-28
Identities = 68/183 (37%), Positives = 109/183 (59%)
Frame = -1
Query: 550 KKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKIDYGSLEE 371
++G PD + CGCLL+V++ C+K ED K L CL++A+ L ++V +L+ +K+ + ++++
Sbjct: 508 ERGVKPDDRLCGCLLSVVSLCEKTEDEDKVLSCLQQANPKLVTLVKVLQDKKLGFETIKD 567
Query: 370 KLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKSPKEWCL 191
+ V++G +S R FCN LID+ +RAH+LL LG +G+YP L+ K+ +EWCL
Sbjct: 568 EFRDVISGTSVESRRPFCNCLIDICRNKNNHERAHELLYLGTLYGLYPGLHNKTSREWCL 627
Query: 190 QAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSLSASLGS 11
LS AA TA + W+ ++ ++ E LP F TG G H Q L+ S S
Sbjct: 628 DVRSLSIGAAHTALEEWMGTLYKIVQRE--EALPELFSAQTGTGTHKF--SQGLAHSFAS 683
Query: 10 VLE 2
+E
Sbjct: 684 HVE 686
>ref|XP_006352838.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Solanum tuberosum]
Length = 711
Score = 130 bits (326), Expect = 3e-28
Identities = 71/189 (37%), Positives = 109/189 (57%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V ++ ++G PD + CGCLL+V++YC K +D K L CL++A+ L + V ML+ E
Sbjct: 493 VFEISVQRGVKPDDRLCGCLLSVVSYC-KGDDADKVLACLQQANPRLVTFVKMLEDESTS 551
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
Y ++E+ +L D+ R FCN LID+ +RAH+LL LG +G+YP L+ K+
Sbjct: 552 YDIVKEEFRSILTNTSDDARRPFCNCLIDICRKRNLAERAHELLYLGTVYGLYPGLHTKT 611
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSL 29
P+EW L LS AA TAF+ W+++++ ++ S E LP TG G H Q L
Sbjct: 612 PEEWRLNVRALSVGAAQTAFEEWMRTLAKIVQ--SEEPLPEVLSANTGAGTHKF--SQGL 667
Query: 28 SASLGSVLE 2
+ + S +E
Sbjct: 668 ANAFASHVE 676
>ref|XP_004245879.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Solanum lycopersicum]
Length = 711
Score = 129 bits (324), Expect = 5e-28
Identities = 71/189 (37%), Positives = 109/189 (57%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V ++ ++G PD + CGCLL+V++YC K +D K L CL++A+ L + V ML+ E
Sbjct: 493 VFEVSVQRGVKPDDRLCGCLLSVVSYC-KGDDADKVLACLQQANPRLVTFVKMLEDESTS 551
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
Y ++E+ +L D+ R FCN LID+ +RAH+LL LG +G+YP L+ K+
Sbjct: 552 YDIVKEEFRSILTNTSDDARRPFCNCLIDICRKRNRAERAHELLYLGTVYGLYPGLHTKT 611
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSL 29
P+EW L LS AA TAF+ W+++++ ++ S E LP TG G H Q L
Sbjct: 612 PEEWRLNVRALSVGAAQTAFEEWMRTLAKIVQ--SEEPLPEVLSANTGAGTHKF--SQGL 667
Query: 28 SASLGSVLE 2
+ + S +E
Sbjct: 668 ANAFASHVE 676
>ref|XP_004300258.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 716
Score = 128 bits (322), Expect = 9e-28
Identities = 67/186 (36%), Positives = 106/186 (56%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V ++ ++G PD + CGCLL+V++ C+K ED CL++A+ L ++V +L+ EK+
Sbjct: 496 VFNVAVERGVKPDDRLCGCLLSVVSLCEKTEDEDMVFSCLQQANLKLVTLVKLLQDEKVG 555
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
+ +++++ V+ +S R FCN LID+ +RAH+LL LG +G+YP L+ K+
Sbjct: 556 FEAIKDEFRDVIGSTAVESRRPFCNCLIDICRNKNKHERAHELLYLGTLYGLYPGLHNKT 615
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSL 29
EWCL LS AA TA + W+ ++ ++ E LP F TG G H Q L
Sbjct: 616 ANEWCLDVRSLSIGAAHTALEEWMGTLYKIIQRE--EALPKLFSAQTGAGTHKF--SQGL 671
Query: 28 SASLGS 11
+ S GS
Sbjct: 672 AHSFGS 677
>gb|EXB99769.1| hypothetical protein L484_023300 [Morus notabilis]
Length = 710
Score = 126 bits (316), Expect = 4e-27
Identities = 69/189 (36%), Positives = 106/189 (56%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V + +KG PD + CGCLL+V++ CD D K L CL++A+ L V +L+ E+
Sbjct: 489 VFSFVVEKGVRPDDRLCGCLLSVVSMCDDVGDEEKVLACLQQANPKLVVFVRLLQGEETS 548
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
+ +++++ V++ ++ R FCN LIDM + +RAH+LL LG +G+YP L+ K+
Sbjct: 549 FKTVKDEFRSVISDTSIEARRPFCNCLIDMCRNRGHHERAHELLYLGTLYGLYPGLHNKT 608
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSL 29
KEWCL LS AA TA + W+ ++ ++ E+LP F TG G H Q L
Sbjct: 609 AKEWCLDVRSLSIGAAQTALEEWMGTLYRIVQRK--EELPELFSAQTGVGTHKF--SQGL 664
Query: 28 SASLGSVLE 2
+ S S E
Sbjct: 665 ANSFASHAE 673
>gb|EOY24047.1| Pentatricopeptide (PPR) repeat-containing protein [Theobroma cacao]
Length = 711
Score = 125 bits (314), Expect = 7e-27
Identities = 66/183 (36%), Positives = 104/183 (56%)
Frame = -1
Query: 550 KKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKIDYGSLEE 371
++G PD + CGCLL+V++ C+K ED K L CL++A+ L + V +++ EK +++E
Sbjct: 495 EQGIKPDDRLCGCLLSVVSLCEKREDMDKVLACLQQANPRLVAFVKLIEEEKSSLDTVKE 554
Query: 370 KLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKSPKEWCL 191
+ +++ D+ R FCN LID+ + +RAH LL LG +G+YP L+ K+ EW L
Sbjct: 555 EFKGIISDTTDDARRPFCNCLIDICRSKNLHERAHDLLYLGTVYGLYPGLHNKTVNEWSL 614
Query: 190 QAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSLSASLGS 11
LS AA TA + W+ +++ ++ E LP F TG G H Q LS + S
Sbjct: 615 DVRSLSVGAAQTALEEWMGTLAKIVKRE--EALPELFSAQTGTGTHRF--SQGLSNAFAS 670
Query: 10 VLE 2
L+
Sbjct: 671 HLK 673
>ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic [Vitis vinifera]
Length = 723
Score = 125 bits (314), Expect = 7e-27
Identities = 68/186 (36%), Positives = 110/186 (59%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V ++ ++G PD + CGCLL+V+++C+ ED +K L CL++A+ L + V++L+ EKI
Sbjct: 502 VFEVSLERGVKPDDRLCGCLLSVVSFCEGAEDANKVLACLQQANPKLVAFVNLLE-EKIS 560
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
+ +L+E+ +L ++ R FCN LID+ +RAH+LL LG +G+YP L+ ++
Sbjct: 561 FEALKEEFRGILTDTAVEARRPFCNCLIDICRNRSLHERAHELLYLGTLYGLYPGLHNRT 620
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSL 29
EWCL LS AA TA + W+ ++S ++ E LP F TG G H Q L
Sbjct: 621 ADEWCLDVRSLSVGAAHTALEEWMGTLSKIVQRE--EALPEAFSANTGTGTHKF--SQGL 676
Query: 28 SASLGS 11
+++ S
Sbjct: 677 ASAFAS 682
>ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 712
Score = 122 bits (307), Expect = 5e-26
Identities = 65/188 (34%), Positives = 107/188 (56%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V D+ ++G PD + CGCLL+V++ D K L CL++A+ L + + +++ EK
Sbjct: 492 VFDISVERGIKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQQANPKLVAFIHLIEDEKTS 551
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
+ +++E+ +++ + R FCN LID+ + +RAH+LL LG +G+YP L+ K+
Sbjct: 552 FETVKEEFKGIMSNAAVEVRRPFCNCLIDICRNKDLLERAHELLYLGTLYGLYPGLHNKT 611
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSL 29
+EWCL LS AALTA + W+ +++ ++ E LP F+ TG G H Q L
Sbjct: 612 VEEWCLDVRSLSVGAALTALEEWMWTLTKIVKRE--ETLPELFLAQTGTGAHKF--AQGL 667
Query: 28 SASLGSVL 5
+ S S L
Sbjct: 668 NISFASHL 675
>ref|XP_006600892.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like isoform X2 [Glycine max]
Length = 655
Score = 122 bits (306), Expect = 6e-26
Identities = 64/182 (35%), Positives = 104/182 (57%)
Frame = -1
Query: 550 KKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKIDYGSLEE 371
++G PD + CGCLL+V++ D K L CL++A+ L + + +++ EK + S++E
Sbjct: 439 ERGIKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQRANPKLVAFIHLIEDEKSSFESVKE 498
Query: 370 KLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKSPKEWCL 191
+ +++ + R FCN LID+ + ++RAH+LL LG +G+YP L+ K+ EWCL
Sbjct: 499 EFKGIMSNAAVEVRRPFCNCLIDICRNKDLRERAHELLYLGTLYGLYPGLHNKTDNEWCL 558
Query: 190 QAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSLSASLGS 11
LS AALTA + W+ +++ ++ E LP F+ TG G H Q L+ S S
Sbjct: 559 DVRSLSVGAALTALEEWMWTLTKIVKRE--ETLPELFLAQTGTGAHKF--AQGLNISFAS 614
Query: 10 VL 5
L
Sbjct: 615 HL 616
>ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like isoform X1 [Glycine max]
Length = 714
Score = 122 bits (306), Expect = 6e-26
Identities = 64/182 (35%), Positives = 104/182 (57%)
Frame = -1
Query: 550 KKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKIDYGSLEE 371
++G PD + CGCLL+V++ D K L CL++A+ L + + +++ EK + S++E
Sbjct: 498 ERGIKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQRANPKLVAFIHLIEDEKSSFESVKE 557
Query: 370 KLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKSPKEWCL 191
+ +++ + R FCN LID+ + ++RAH+LL LG +G+YP L+ K+ EWCL
Sbjct: 558 EFKGIMSNAAVEVRRPFCNCLIDICRNKDLRERAHELLYLGTLYGLYPGLHNKTDNEWCL 617
Query: 190 QAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSLSASLGS 11
LS AALTA + W+ +++ ++ E LP F+ TG G H Q L+ S S
Sbjct: 618 DVRSLSVGAALTALEEWMWTLTKIVKRE--ETLPELFLAQTGTGAHKF--AQGLNISFAS 673
Query: 10 VL 5
L
Sbjct: 674 HL 675
>ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Cucumis sativus]
gi|449521148|ref|XP_004167592.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Cucumis sativus]
Length = 710
Score = 121 bits (304), Expect = 1e-25
Identities = 66/186 (35%), Positives = 102/186 (54%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V ++ +KG PD + CGCLL+VL+ C ED +K CL++A+ L S +++L+ I
Sbjct: 488 VFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINLLQQNDIT 547
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
+ ++ + +L ++ R FCN LID+ ++RAH+LL LG +G+YP L+ K+
Sbjct: 548 FEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKT 607
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSL 29
EWCL LS AA TA + W+ ++S ++ E LP TG G H Q L
Sbjct: 608 ETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRE--EALPELLSAQTGAGTHRF--SQGL 663
Query: 28 SASLGS 11
+ S S
Sbjct: 664 ANSFAS 669
>ref|XP_006467283.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Citrus sinensis]
Length = 695
Score = 120 bits (302), Expect = 2e-25
Identities = 65/164 (39%), Positives = 93/164 (56%)
Frame = -1
Query: 544 GFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKIDYGSLEEKL 365
G PD +FCGCLL V+T KEE K ++C++K+++ L +V +L E+ G +++
Sbjct: 476 GITPDDRFCGCLLNVMTQTPKEE-LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEA 534
Query: 364 GVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKSPKEWCLQA 185
+ + KD + +CN LID+ + A KLL LG+ VY D+ +SP +W L
Sbjct: 535 TELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHL 594
Query: 184 VGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRH 53
LS AALTA WI +S ALE SGE+ PP I TG G+H
Sbjct: 595 KSLSLGAALTALHIWINDLSKALE--SGEEFPPLLGINTGHGKH 636
>ref|XP_006856269.1| hypothetical protein AMTR_s00047p00074820 [Amborella trichopoda]
gi|548860129|gb|ERN17736.1| hypothetical protein
AMTR_s00047p00074820 [Amborella trichopoda]
Length = 711
Score = 120 bits (302), Expect = 2e-25
Identities = 59/168 (35%), Positives = 101/168 (60%)
Frame = -1
Query: 556 IFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKIDYGSL 377
+ + G PD + C CLL+V++ K+E + CL++A+ L+S+V ++ ++++ G L
Sbjct: 493 VLEMGLSPDDRLCSCLLSVMSQTPKKE-LDVLMDCLERANTKLSSVVKLIVRDELEQGIL 551
Query: 376 EEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKSPKEW 197
++++G + + +++ + +CN LID+ + DRA +LL LG+ +Y + KSP +W
Sbjct: 552 KQEVGDLFYNLGEETRKAYCNCLIDLCVNLDLLDRACELLELGLSLEIYTGIQSKSPTQW 611
Query: 196 CLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRH 53
L LS AALTA W+ +S ALE SGE+ PP I+TG G+H
Sbjct: 612 SLHVRSLSLGAALTALHAWMNDLSRALE--SGEEFPPLLGIHTGHGKH 657
>ref|XP_004293389.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 683
Score = 120 bits (302), Expect = 2e-25
Identities = 64/168 (38%), Positives = 96/168 (57%)
Frame = -1
Query: 556 IFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKIDYGSL 377
+ + G PD +FCGCLL V+T K+E SK C+++ + L S+V +L + +
Sbjct: 465 LLELGITPDERFCGCLLNVMTLTPKDE-LSKLTDCIERGNEKLGSVVRLLVETQDSSENF 523
Query: 376 EEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKSPKEW 197
+++ +L V D + +CN LID+ + +RA +LL LG+ +Y D+ +SP +W
Sbjct: 524 KKEASELLTSVGSDVKKAYCNCLIDLCVNLDLLERACELLDLGLTLEIYTDIQSRSPTQW 583
Query: 196 CLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRH 53
L GLS AALTA WI +S +LE SGE+LPP I TG G+H
Sbjct: 584 SLYLKGLSLGAALTALHVWINDLSRSLE--SGEELPPLLGINTGHGKH 629
>ref|XP_002519842.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540888|gb|EEF42446.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 677
Score = 120 bits (302), Expect = 2e-25
Identities = 64/189 (33%), Positives = 106/189 (56%)
Frame = -1
Query: 568 VCDLIFKKGFVPDVKFCGCLLAVLTYCDKEEDFSKALKCLKKADAGLASIVSMLKSEKID 389
V + ++G PD + CGCLL+V++ C++ ED K L CL+ A+ L ++V ++ E+
Sbjct: 456 VFNFSMERGVNPDDRLCGCLLSVVSLCEESEDVDKVLACLQVANPKLVALVKLIAEEESS 515
Query: 388 YGSLEEKLGVVLAGVPKDSGRIFCNFLIDMSHAFEYQDRAHKLLSLGMQFGVYPDLYMKS 209
+ +++E+ +++ ++ R FCN LID+ RAH+LL LG +G+YPDL+ K+
Sbjct: 516 FETVKEEFKAIVSDTAVEARRPFCNCLIDVCRNRNLHGRAHELLYLGSLYGLYPDLHNKT 575
Query: 208 PKEWCLQAVGLSFHAALTAFQRWIKSVSNALEDSSGEDLPPFFVIYTGRGRHHLLPEQSL 29
EW L LS AA TA + W+ ++ ++ E LP F +TG G H Q L
Sbjct: 576 EDEWSLDVRSLSVGAAHTALEEWMGTLVKFVQ--RNEALPEIFSAHTGTGTHKF--SQGL 631
Query: 28 SASLGSVLE 2
+ + S +E
Sbjct: 632 ANAFASHVE 640