BLASTX nr result
ID: Ephedra27_contig00002222
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00002222
(2422 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK25455.1| unknown [Picea sitchensis] 799 0.0
ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-li... 676 0.0
gb|EOY19345.1| Replication factor C subunit 1 [Theobroma cacao] 675 0.0
ref|XP_002462723.1| hypothetical protein SORBIDRAFT_02g030910 [S... 675 0.0
ref|XP_006663537.1| PREDICTED: replication factor C subunit 1-li... 674 0.0
tpg|DAA42160.1| TPA: hypothetical protein ZEAMMB73_255627 [Zea m... 674 0.0
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li... 672 0.0
emb|CBI24290.3| unnamed protein product [Vitis vinifera] 672 0.0
dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sati... 670 0.0
gb|EEC68391.1| hypothetical protein OsI_36544 [Oryza sativa Indi... 670 0.0
ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group] g... 670 0.0
gb|EMJ00202.1| hypothetical protein PRUPE_ppa000922mg [Prunus pe... 667 0.0
ref|XP_003575946.1| PREDICTED: replication factor C subunit 1-li... 663 0.0
ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutr... 661 0.0
dbj|BAJ33988.1| unnamed protein product [Thellungiella halophila] 661 0.0
ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li... 660 0.0
ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis ... 659 0.0
ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-li... 658 0.0
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi... 658 0.0
ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Popu... 657 0.0
>gb|ABK25455.1| unknown [Picea sitchensis]
Length = 550
Score = 799 bits (2063), Expect = 0.0
Identities = 408/544 (75%), Positives = 463/544 (85%), Gaps = 3/544 (0%)
Frame = +2
Query: 191 MWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSK 370
MWTEKYRPKTP+DI+GNQ+IVK +H+WLA+W+ +HL+T K KG KR G G+ SSN SK
Sbjct: 1 MWTEKYRPKTPDDIIGNQSIVKNIHDWLAHWDEQHLHTEGKESKGKKR-GGGSVSSNASK 59
Query: 371 KAVIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGSTANSIKEMI 550
KAV++SG PGIGKTT+ARL+SQMLGFETIEVNASDSRGKADSKI +G++GSTANSIKEM+
Sbjct: 60 KAVLLSGTPGIGKTTSARLISQMLGFETIEVNASDSRGKADSKIERGMAGSTANSIKEMV 119
Query: 551 NNATIHRG-LTNGGK--KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXXNDRYS 721
+N ++ RG +G K KSVLIMDEVDGMSGGDRGGVSDL NDRY+
Sbjct: 120 SNESLSRGSFMDGSKRGKSVLIMDEVDGMSGGDRGGVSDLIASIKISKIPIICICNDRYN 179
Query: 722 QKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQ 901
QKLKSL+N CLPLNFRKPTKQQMAKRL QVAELEG+KVDEAAL ELGERVNGDMRMALNQ
Sbjct: 180 QKLKSLVNYCLPLNFRKPTKQQMAKRLCQVAELEGLKVDEAALLELGERVNGDMRMALNQ 239
Query: 902 LQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPD 1081
LQYMSLS S +KYADIK+RL+ KDEDITPFTA +KLLG E RLRMDE+MDL MSDPD
Sbjct: 240 LQYMSLSSSILKYADIKARLQGSKKDEDITPFTAVDKLLGYEGGRLRMDERMDLSMSDPD 299
Query: 1082 LVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMG 1261
LVPLLIQENYLNYKP+AA RD DGS RMDLI+RAA+SIADGDIIN QIRRY+QWQHSQMG
Sbjct: 300 LVPLLIQENYLNYKPSAASRDGDGSLRMDLIARAAESIADGDIINVQIRRYRQWQHSQMG 359
Query: 1262 AFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACE 1441
AFASSIIP+AF+HG RE+ VQGE+NFNRFG WLGKNST GKN RLL DVHVH LAS CE
Sbjct: 360 AFASSIIPAAFMHGPREVLVQGERNFNRFGGWLGKNSTLGKNNRLLEDVHVHFLASGTCE 419
Query: 1442 LSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVELSKFQGH 1621
+R LRLDYL L+ QLT PL+TLPK+EAVQ V++FM+EYSL+QEDFDTIVELSKFQGH
Sbjct: 420 PTRGALRLDYLPLLVLQLTRPLQTLPKEEAVQTVVEFMNEYSLNQEDFDTIVELSKFQGH 479
Query: 1622 LDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDEG 1801
DPL GI PAVKAALTK YKQNE+S RVR++DL+PA+ +PGQKK PK+KRVA LL T +
Sbjct: 480 PDPLDGIQPAVKAALTKAYKQNEKSHRVRSSDLLPAILLPGQKKTPKSKRVASLLATVD- 538
Query: 1802 EFPL 1813
E+PL
Sbjct: 539 EYPL 542
>ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-like [Setaria italica]
Length = 989
Score = 676 bits (1744), Expect = 0.0
Identities = 356/607 (58%), Positives = 436/607 (71%), Gaps = 8/607 (1%)
Frame = +2
Query: 2 KEPPNKEQNDNKSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNS--NKALQTS 175
K P K D + S+ ++L S + A + + ++ N + +
Sbjct: 304 KSKPAKAPVDGHQSSNGSEKLQKLQTKSSPAKVEKRAEASPVGKSFASKSNVANASAENR 363
Query: 176 KAE-----TAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTG 340
KA+ + WTEKYRPK PNDIVGNQ++VKQLH+WL +W+ + L++G+KGK G K+
Sbjct: 364 KAKNIDRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDTQFLHSGQKGK-GKKQ-- 420
Query: 341 AGNKSSNTSKKAVIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISG 520
+ N +KKAV++SGPPGIGKTT A++VSQMLG + IEVNASDSRGKADSKI KG+ G
Sbjct: 421 ----ADNGAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGG 476
Query: 521 STANSIKEMINNATIHRGLTN-GGKKSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXX 697
ST+NS+KE+I+NAT++ K+VLIMDEVDGMS GDRGGV+DL
Sbjct: 477 STSNSVKELISNATLNYSDNRLKHPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPII 536
Query: 698 XXXNDRYSQKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNG 877
NDRYSQKLKSL+N CL LNFRKPTKQQM+KRL ++A+ EGI+ E A+EEL ERV+G
Sbjct: 537 CICNDRYSQKLKSLVNYCLMLNFRKPTKQQMSKRLMEIAKKEGIQAQENAMEELAERVHG 596
Query: 878 DMRMALNQLQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKM 1057
D+RMALN LQYMSLS S +KY DI+ RL KDEDI+PFTA +KL G RLRMDE++
Sbjct: 597 DIRMALNHLQYMSLSQSVVKYDDIRERLNSSAKDEDISPFTAVDKLFGFNGGRLRMDERI 656
Query: 1058 DLCMSDPDLVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQ 1237
D MSDPDLVPL+IQENY+NY+PN G+D G +RM+ ++RAA+SIADGD++N QIRRY+
Sbjct: 657 DFGMSDPDLVPLIIQENYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIRRYR 716
Query: 1238 QWQHSQMGAFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVH 1417
QWQ SQ FASSI+P+AF+HG REI GE+NFNRFG WLGK ST KN RLL D H H
Sbjct: 717 QWQLSQAACFASSIVPAAFMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDAHSH 776
Query: 1418 ILASSACELSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIV 1597
ILAS L RE LRLDYL+ LL QLT+PLKT+PKDEAVQ V++FMD YSLSQEDFDTIV
Sbjct: 777 ILASQQANLDRETLRLDYLTLLLRQLTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIV 836
Query: 1598 ELSKFQGHLDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVA 1777
E+SKF+GH P+ GI PAVK+ALTK YKQ SR VR ADLI IPG KK P KRVA
Sbjct: 837 EISKFKGHPSPMDGIQPAVKSALTKAYKQGSSSRVVRAADLI---NIPGMKK-PLKKRVA 892
Query: 1778 KLLNTDE 1798
+L E
Sbjct: 893 AILEPVE 899
>gb|EOY19345.1| Replication factor C subunit 1 [Theobroma cacao]
Length = 1012
Score = 675 bits (1741), Expect = 0.0
Identities = 355/606 (58%), Positives = 436/606 (71%), Gaps = 12/606 (1%)
Frame = +2
Query: 17 KEQNDNKSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKAETAM- 193
+ N K+ K K + ++ + K N S + S K+L TS + T
Sbjct: 271 RASNCGKAHSKEESKKSAESFAASLPKKSPQKMEVKSNSSSAKI-SGKSLTTSVSSTKQR 329
Query: 194 ----------WTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGA 343
WTEKYRPK PN++ GNQ++V QLH WLA+W + L TG KGK G K+
Sbjct: 330 GQPIQHSSLTWTEKYRPKVPNEMTGNQSLVNQLHNWLAHWNEQFLGTGSKGK-GKKQNDP 388
Query: 344 GNKSSNTSKKAVIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGS 523
G +KKAV++SG PGIGKTT+A+LVSQMLGF+TIEVNASDSRGKAD+KI KGI GS
Sbjct: 389 G------AKKAVLLSGTPGIGKTTSAKLVSQMLGFQTIEVNASDSRGKADAKISKGIGGS 442
Query: 524 TANSIKEMINNATIHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXX 700
ANSIKE+++N + + K+VLIMDEVDGMS GDRGG++DL
Sbjct: 443 NANSIKELVSNEALSVNMDRSKHVKTVLIMDEVDGMSAGDRGGIADLIASIKISKIPIIC 502
Query: 701 XXNDRYSQKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGD 880
NDRYSQKLKSL+N CL L+FRKPTKQQMAKRL QVA EG++V+E AL+EL ERVNGD
Sbjct: 503 ICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMQVANAEGLQVNEIALQELAERVNGD 562
Query: 881 MRMALNQLQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMD 1060
MRMALNQLQYMSLS S IKY DI+ RL G KDEDI+PFTA +KL G+ +LRMD+++D
Sbjct: 563 MRMALNQLQYMSLSMSVIKYDDIRQRLLSGSKDEDISPFTAVDKLFGIYGGKLRMDQRID 622
Query: 1061 LCMSDPDLVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQ 1240
L MSDPDLVPLLIQENY+NY+P++ G+D G +RM+LI++AA+SI DGDIIN QIRRY+Q
Sbjct: 623 LSMSDPDLVPLLIQENYINYRPSSIGKDDSGMKRMNLIAQAAESIGDGDIINVQIRRYRQ 682
Query: 1241 WQHSQMGAFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHI 1420
WQ SQ G+ +S IIP+A +HG RE QGE+NFNRFG WLGKNST KN RLL D+HVHI
Sbjct: 683 WQLSQAGSLSSCIIPAALLHGQRETLEQGERNFNRFGGWLGKNSTMSKNYRLLEDLHVHI 742
Query: 1421 LASSACELSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVE 1600
LAS RE LRLDYL+ LLTQLTNPL+ PKDEAV+ V++FM+ YS+SQEDFDT+VE
Sbjct: 743 LASRESSSGRETLRLDYLTVLLTQLTNPLRDKPKDEAVKQVVEFMNAYSISQEDFDTVVE 802
Query: 1601 LSKFQGHLDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAK 1780
LSKFQG +PL+GIP AVKAALTK Y + +++ VR ADL+ +PG KKAPK KR+A
Sbjct: 803 LSKFQGQSNPLEGIPAAVKAALTKAYNEGSKTQMVRAADLV---TLPGMKKAPK-KRIAA 858
Query: 1781 LLNTDE 1798
+L +
Sbjct: 859 ILEPSD 864
>ref|XP_002462723.1| hypothetical protein SORBIDRAFT_02g030910 [Sorghum bicolor]
gi|241926100|gb|EER99244.1| hypothetical protein
SORBIDRAFT_02g030910 [Sorghum bicolor]
Length = 1025
Score = 675 bits (1741), Expect = 0.0
Identities = 360/613 (58%), Positives = 446/613 (72%), Gaps = 10/613 (1%)
Frame = +2
Query: 2 KEPPNKEQNDNKSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKA 181
K P +K+Q++N S +K S+ + + + K + +A +S+ NSN A ++
Sbjct: 345 KAPVDKQQSNN-SFEKLQKSQTKSSPAKVEKRAEASAVG-----KSIASNSNAASASADK 398
Query: 182 E--------TAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRT 337
+ + WTEKYRPK PNDIVGNQ++VKQLH+WL +W+ L++G+KGK G K+
Sbjct: 399 QKPKNVDRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKGK-GKKQ- 456
Query: 338 GAGNKSSNTSKKAVIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGIS 517
+ + +KKAV++SGPPGIGKTT A++VSQMLG + IEVNASDSRGKADSKI KG+
Sbjct: 457 -----ADSAAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVG 511
Query: 518 GSTANSIKEMINNATIHRGLTNGGK--KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXX 691
GST+NSIKE+I+NAT++ G N K K+VLIMDEVDGMS GDRGGV+DL
Sbjct: 512 GSTSNSIKELISNATLNYG-DNRSKHPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIP 570
Query: 692 XXXXXNDRYSQKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERV 871
NDRYSQKLKSL+N CL LNFRKPTKQQM KRL ++A+ EGI+ E A+EEL ERV
Sbjct: 571 IICICNDRYSQKLKSLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERV 630
Query: 872 NGDMRMALNQLQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDE 1051
+GD+RMALN LQYMSLS S +KY DI+ RL KDEDI+PFTA +KL G RLRMDE
Sbjct: 631 HGDIRMALNHLQYMSLSQSVVKYDDIRERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDE 690
Query: 1052 KMDLCMSDPDLVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRR 1231
++D MSDPDLVPL+IQENY+NY+PN G+D G +RM+ ++RAA+SIADGD++N QIRR
Sbjct: 691 RIDFGMSDPDLVPLIIQENYINYRPNTLGKDESGVKRMNALARAAESIADGDLVNVQIRR 750
Query: 1232 YQQWQHSQMGAFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVH 1411
Y+QWQ SQ FASSI+P+A++HG RE+ GE+NFNRFG WLGK ST KN RLL DVH
Sbjct: 751 YRQWQLSQAACFASSIVPAAWMHGNREVLEAGERNFNRFGGWLGKYSTTNKNRRLLEDVH 810
Query: 1412 VHILASSACELSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDT 1591
HILAS L RE LRLDYL+ +L +LT+PLK +PKDEAVQ V++FMD YSLSQEDFDT
Sbjct: 811 SHILASQQANLDREALRLDYLTLILRELTDPLKKMPKDEAVQKVVEFMDTYSLSQEDFDT 870
Query: 1592 IVELSKFQGHLDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKR 1771
IVE+SKF+GH P+ GI PAVK+ALTK YKQ SR VR ADLI IPG KK P KR
Sbjct: 871 IVEVSKFKGHPSPMDGIQPAVKSALTKAYKQGSSSRVVRAADLI---NIPGMKK-PLKKR 926
Query: 1772 VAKLLNTDEGEFP 1810
VA +L E P
Sbjct: 927 VAAILEPLEESVP 939
>ref|XP_006663537.1| PREDICTED: replication factor C subunit 1-like [Oryza brachyantha]
Length = 1061
Score = 674 bits (1740), Expect = 0.0
Identities = 354/603 (58%), Positives = 435/603 (72%), Gaps = 5/603 (0%)
Frame = +2
Query: 17 KEQNDNKSTQKNSDSKRQLTESSGNKDRDYNAR----NGKMNERSVQYNSNKALQTSKAE 184
K Q+DN S ++ + KD + + K N+ V ++ KA +
Sbjct: 386 KHQSDNNSEKQQKSPIKSCPVKVERKDANQITTGKNISPKSNKERVSTDNQKAKIIDRG- 444
Query: 185 TAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSNT 364
+ WTEKYRPK PNDIVGNQ++VKQLH+WL W+++ L++G+KGK G K++ G
Sbjct: 445 SMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKGWDDQFLHSGQKGK-GKKQSDGG------ 497
Query: 365 SKKAVIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGSTANSIKE 544
SKKAV++SGPPGIGKTT A++VSQMLG + IEVNASDSRGKADSKI +G+ GST+NSIKE
Sbjct: 498 SKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIERGVGGSTSNSIKE 557
Query: 545 MINNATIHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXXNDRYS 721
+I+N T++ + K+VL+MDEVDGMS GDRGGV+DL NDRYS
Sbjct: 558 LISNVTLNYSNNRSKQPKAVLVMDEVDGMSAGDRGGVADLIASIKISKIPIVCICNDRYS 617
Query: 722 QKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQ 901
QKLKSL+N CL LNFRKPTKQQM KRL ++A+ EG++ E A+EEL ERV+GD+RMALN
Sbjct: 618 QKLKSLVNYCLLLNFRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNH 677
Query: 902 LQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPD 1081
LQYMSLS S +KY DI+ RL KDEDI+PFTA +KL G RLRMDE++DL MSDPD
Sbjct: 678 LQYMSLSQSVVKYDDIRQRLSSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPD 737
Query: 1082 LVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMG 1261
LVPL+IQENY+NY+P G+D G +RM+ ++RAA+SIADGDI+N QIRRY+QWQ SQ
Sbjct: 738 LVPLIIQENYINYRPITVGKDDSGVKRMNFLARAAESIADGDIVNVQIRRYRQWQLSQAA 797
Query: 1262 AFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACE 1441
+SSI+P+A +HG REI GE+NFNRFG WLGK ST KN RLL D H HILAS
Sbjct: 798 CLSSSIVPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNKRLLEDAHSHILASQQAN 857
Query: 1442 LSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVELSKFQGH 1621
L RE+LRLDYL+ LL QLT+PLKT+PKDEAVQ V++FMD YSLSQEDFDTIVELSKF+GH
Sbjct: 858 LDRESLRLDYLTLLLQQLTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGH 917
Query: 1622 LDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDEG 1801
+P+ GI PAVK+ALTK YKQ SR VR ADL+ IPG KK P KRVA +L E
Sbjct: 918 PNPMDGIQPAVKSALTKAYKQGSSSRVVRAADLV---NIPGMKK-PLKKRVAAILEPVEE 973
Query: 1802 EFP 1810
P
Sbjct: 974 SVP 976
>tpg|DAA42160.1| TPA: hypothetical protein ZEAMMB73_255627 [Zea mays]
Length = 985
Score = 674 bits (1740), Expect = 0.0
Identities = 359/612 (58%), Positives = 441/612 (72%), Gaps = 9/612 (1%)
Frame = +2
Query: 2 KEPPNKEQNDNKSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKA 181
K P +K QN+N S++K S+ + + + K + +A +S+ NSN A ++
Sbjct: 304 KAPVDKRQNNN-SSEKLQKSQTKSSPAKVEKRAEASAVG-----KSIASNSNAASASADK 357
Query: 182 E--------TAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRT 337
+ + WTEKYRPK PNDIVGNQ++VKQLH+WL +W+ L++G+KGK G K+T
Sbjct: 358 QKPKIVDRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKGK-GKKQT 416
Query: 338 GAGNKSSNTSKKAVIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGIS 517
+ +KKAV++SGPPGIGKTT A++VSQMLG + IEVNASDSRGKADSKI KG+
Sbjct: 417 ------DSAAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVG 470
Query: 518 GSTANSIKEMINNATIHRGLTN-GGKKSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXX 694
GST+NSIKE+INNAT++ K+VL+MDEVDGMS GDRGGV+DL
Sbjct: 471 GSTSNSIKELINNATLNYSDNRLKHPKAVLVMDEVDGMSAGDRGGVADLIASIKISKIPI 530
Query: 695 XXXXNDRYSQKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVN 874
NDRYSQKLK+L+N CL LNFRKPTKQQM KRL ++A+ EGI+ E A+EEL ERV+
Sbjct: 531 ICICNDRYSQKLKNLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERVH 590
Query: 875 GDMRMALNQLQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEK 1054
GD+RMALN LQYMSLS S +KY DIK RL KDEDI+PFTA +KL G RLRMDE+
Sbjct: 591 GDIRMALNHLQYMSLSQSVVKYDDIKERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDER 650
Query: 1055 MDLCMSDPDLVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRY 1234
MD MSDPDLVPL+IQENY+NY+PN G+D G +RM+ ++RAA+SIADGD++N QIRRY
Sbjct: 651 MDFGMSDPDLVPLIIQENYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIRRY 710
Query: 1235 QQWQHSQMGAFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHV 1414
+QWQ SQ FASSI+P+A +HG REI GE+NFNRFG WLGK ST KN RLL DVH
Sbjct: 711 RQWQLSQAACFASSIVPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDVHS 770
Query: 1415 HILASSACELSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTI 1594
HILAS L R+ LRLDYL+ +L +LT+PLK + KDEAVQ V++FMD YSLSQEDFDTI
Sbjct: 771 HILASQQANLDRDALRLDYLTLILRELTDPLKKMSKDEAVQKVVEFMDTYSLSQEDFDTI 830
Query: 1595 VELSKFQGHLDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRV 1774
VE+SKF+GH P+ GI PAVK+ALTK YKQ SR VR ADLI IPG KK P KRV
Sbjct: 831 VEVSKFKGHPSPMDGIQPAVKSALTKAYKQGSSSRVVRAADLI---NIPGMKK-PLKKRV 886
Query: 1775 AKLLNTDEGEFP 1810
A +L E P
Sbjct: 887 AAILEPVEESLP 898
>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
Length = 933
Score = 672 bits (1735), Expect = 0.0
Identities = 347/547 (63%), Positives = 417/547 (76%), Gaps = 1/547 (0%)
Frame = +2
Query: 167 QTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAG 346
QT + WTEKY+PK PNDI+GNQ++VKQLHEWLA+W + L+TG KGK G K+ +G
Sbjct: 307 QTIGHASLTWTEKYKPKVPNDIIGNQSLVKQLHEWLAHWNEQFLHTGTKGK-GKKQNDSG 365
Query: 347 NKSSNTSKKAVIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGST 526
+KKAV++SG PGIGKTT+A+LVSQMLGF+ IEVNASD+RGKA++KI KGI GS
Sbjct: 366 ------AKKAVLLSGTPGIGKTTSAKLVSQMLGFQAIEVNASDNRGKANAKIDKGIGGSN 419
Query: 527 ANSIKEMINNATIHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXX 703
ANSIKE+++N + + K+VLIMDEVDGMS GDRGGV+DL
Sbjct: 420 ANSIKELVSNEALGAHMDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICI 479
Query: 704 XNDRYSQKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDM 883
NDRYSQKLKSL+N CL L+FRKPTKQQMAKRL QVA EG++V+E ALEEL ERVNGDM
Sbjct: 480 CNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLLQVANAEGLQVNEIALEELAERVNGDM 539
Query: 884 RMALNQLQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDL 1063
RMALNQLQYMSLS S IKY D++ RL KDEDI+PF A +KL G +LRMDE++DL
Sbjct: 540 RMALNQLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFVAVDKLFGFNGGKLRMDERIDL 599
Query: 1064 CMSDPDLVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQW 1243
MSDPDLVPLLIQENY+NY+P AG+D +G +RM L++RAA+SI DGDIIN QIRRY+QW
Sbjct: 600 SMSDPDLVPLLIQENYINYRPTLAGKDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQW 659
Query: 1244 QHSQMGAFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHIL 1423
Q SQ G+FAS I P+A +HG RE QGE+NFNRFG WLGKNST GKN RLL D+HVH+L
Sbjct: 660 QLSQAGSFASCITPAALLHGQRETLEQGERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLL 719
Query: 1424 ASSACELSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVEL 1603
AS R LR+DYL+ +L +LT+PL+ LPKD+AVQ V++FMD YS+SQEDFDTIVEL
Sbjct: 720 ASRESNSGRGTLRIDYLTLILKRLTDPLRMLPKDDAVQKVVEFMDLYSISQEDFDTIVEL 779
Query: 1604 SKFQGHLDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKL 1783
SKFQGH PL+GI PAVK+ALTK Y + SR VR ADLI +PG KKAPK KR+A +
Sbjct: 780 SKFQGHPSPLEGIQPAVKSALTKAYNKGSSSRLVRAADLI---TLPGIKKAPK-KRIAAI 835
Query: 1784 LNTDEGE 1804
L + E
Sbjct: 836 LEPVDDE 842
>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
Length = 941
Score = 672 bits (1735), Expect = 0.0
Identities = 347/547 (63%), Positives = 417/547 (76%), Gaps = 1/547 (0%)
Frame = +2
Query: 167 QTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAG 346
QT + WTEKY+PK PNDI+GNQ++VKQLHEWLA+W + L+TG KGK G K+ +G
Sbjct: 315 QTIGHASLTWTEKYKPKVPNDIIGNQSLVKQLHEWLAHWNEQFLHTGTKGK-GKKQNDSG 373
Query: 347 NKSSNTSKKAVIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGST 526
+KKAV++SG PGIGKTT+A+LVSQMLGF+ IEVNASD+RGKA++KI KGI GS
Sbjct: 374 ------AKKAVLLSGTPGIGKTTSAKLVSQMLGFQAIEVNASDNRGKANAKIDKGIGGSN 427
Query: 527 ANSIKEMINNATIHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXX 703
ANSIKE+++N + + K+VLIMDEVDGMS GDRGGV+DL
Sbjct: 428 ANSIKELVSNEALGAHMDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICI 487
Query: 704 XNDRYSQKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDM 883
NDRYSQKLKSL+N CL L+FRKPTKQQMAKRL QVA EG++V+E ALEEL ERVNGDM
Sbjct: 488 CNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLLQVANAEGLQVNEIALEELAERVNGDM 547
Query: 884 RMALNQLQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDL 1063
RMALNQLQYMSLS S IKY D++ RL KDEDI+PF A +KL G +LRMDE++DL
Sbjct: 548 RMALNQLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFVAVDKLFGFNGGKLRMDERIDL 607
Query: 1064 CMSDPDLVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQW 1243
MSDPDLVPLLIQENY+NY+P AG+D +G +RM L++RAA+SI DGDIIN QIRRY+QW
Sbjct: 608 SMSDPDLVPLLIQENYINYRPTLAGKDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQW 667
Query: 1244 QHSQMGAFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHIL 1423
Q SQ G+FAS I P+A +HG RE QGE+NFNRFG WLGKNST GKN RLL D+HVH+L
Sbjct: 668 QLSQAGSFASCITPAALLHGQRETLEQGERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLL 727
Query: 1424 ASSACELSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVEL 1603
AS R LR+DYL+ +L +LT+PL+ LPKD+AVQ V++FMD YS+SQEDFDTIVEL
Sbjct: 728 ASRESNSGRGTLRIDYLTLILKRLTDPLRMLPKDDAVQKVVEFMDLYSISQEDFDTIVEL 787
Query: 1604 SKFQGHLDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKL 1783
SKFQGH PL+GI PAVK+ALTK Y + SR VR ADLI +PG KKAPK KR+A +
Sbjct: 788 SKFQGHPSPLEGIQPAVKSALTKAYNKGSSSRLVRAADLI---TLPGIKKAPK-KRIAAI 843
Query: 1784 LNTDEGE 1804
L + E
Sbjct: 844 LEPVDDE 850
>dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sativa Japonica Group]
Length = 1021
Score = 670 bits (1729), Expect = 0.0
Identities = 352/589 (59%), Positives = 432/589 (73%), Gaps = 1/589 (0%)
Frame = +2
Query: 23 QNDNKSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKAETAMWTE 202
+ KS K+S K + GN+ + K N+ S ++ K + + WTE
Sbjct: 354 EKQQKSPMKSSPVK--VERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRG-SLQWTE 410
Query: 203 KYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSKKAVI 382
KYRPK PNDIVGNQ++VKQLH+WL +WE++ L++G+KGK G K+ +G +KKAV+
Sbjct: 411 KYRPKVPNDIVGNQSMVKQLHDWLKSWEDQFLHSGQKGK-GKKQADSG------AKKAVL 463
Query: 383 MSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGSTANSIKEMINNAT 562
+SGPPGIGKTT A++VSQMLG + IEVNASDSRGKADSKI KG+ GST+NSIKE+I+NAT
Sbjct: 464 LSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNAT 523
Query: 563 IHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXXNDRYSQKLKSL 739
++ + K+VL+MDEVDGMS GDRGGV+DL NDRYSQKLKSL
Sbjct: 524 LNYSNNRLKRPKAVLVMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSL 583
Query: 740 MNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSL 919
+N CL LNFRKPTKQQM KRL ++A+ EG++ E A+EEL ERV+GD+RMALN LQYMSL
Sbjct: 584 VNYCLLLNFRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSL 643
Query: 920 SFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLI 1099
S S +KY DI+ RL KDEDI+PFTA +KL G RLRMDE++DL MSDPDLVPL+I
Sbjct: 644 SQSVVKYDDIRQRLNSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLII 703
Query: 1100 QENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSI 1279
QENY+NY+P G+D G +RM+ ++RAA+SIAD DI+N QIRRY+QWQ SQ +SSI
Sbjct: 704 QENYINYRPITVGKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQLSQAACLSSSI 763
Query: 1280 IPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENL 1459
+P+A +HG REI GE+NFNRFG WLGK ST KN RLL D H HILAS L RE+L
Sbjct: 764 VPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILASQQANLDRESL 823
Query: 1460 RLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVELSKFQGHLDPLKG 1639
RLDYL+ LL QLT+PLKT+PKDEAVQ V++FMD YSLSQEDFDTIVELSKF+GH +P+ G
Sbjct: 824 RLDYLTLLLRQLTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDG 883
Query: 1640 IPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 1786
I PAVK+ALTK YKQ SR VR ADL+ IPG KK P KRVA +L
Sbjct: 884 IQPAVKSALTKAYKQGSSSRVVRAADLV---NIPGMKK-PLKKRVAAIL 928
>gb|EEC68391.1| hypothetical protein OsI_36544 [Oryza sativa Indica Group]
Length = 1014
Score = 670 bits (1729), Expect = 0.0
Identities = 352/589 (59%), Positives = 432/589 (73%), Gaps = 1/589 (0%)
Frame = +2
Query: 23 QNDNKSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKAETAMWTE 202
+ KS K+S K + GN+ + K N+ S ++ K + + WTE
Sbjct: 347 EKQQKSPMKSSPVK--VERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRG-SLQWTE 403
Query: 203 KYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSKKAVI 382
KYRPK PNDIVGNQ++VKQLH+WL +WE++ L++G+KGK G K+ +G +KKAV+
Sbjct: 404 KYRPKVPNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGK-GKKQADSG------AKKAVL 456
Query: 383 MSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGSTANSIKEMINNAT 562
+SGPPGIGKTT A++VSQMLG + IEVNASDSRGKADSKI KG+ GST+NSIKE+I+NAT
Sbjct: 457 LSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNAT 516
Query: 563 IHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXXNDRYSQKLKSL 739
++ + K+VL+MDEVDGMS GDRGGV+DL NDRYSQKLKSL
Sbjct: 517 LNYSNNRLKRPKAVLVMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSL 576
Query: 740 MNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSL 919
+N CL LNFRKPTKQQM KRL ++A+ EG++ E A+EEL ERV+GD+RMALN LQYMSL
Sbjct: 577 VNYCLLLNFRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSL 636
Query: 920 SFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLI 1099
S S +KY DI+ RL KDEDI+PFTA +KL G RLRMDE++DL MSDPDLVPL+I
Sbjct: 637 SQSVVKYDDIRQRLNSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLII 696
Query: 1100 QENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSI 1279
QENY+NY+P G+D G +RM+ ++RAA+SIAD DI+N QIRRY+QWQ SQ +SSI
Sbjct: 697 QENYINYRPITVGKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQLSQAACLSSSI 756
Query: 1280 IPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENL 1459
+P+A +HG REI GE+NFNRFG WLGK ST KN RLL D H HILAS L RE+L
Sbjct: 757 VPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILASQQANLDRESL 816
Query: 1460 RLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVELSKFQGHLDPLKG 1639
RLDYL+ LL QLT+PLKT+PKDEAVQ V++FMD YSLSQEDFDTIVELSKF+GH +P+ G
Sbjct: 817 RLDYLTLLLRQLTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDG 876
Query: 1640 IPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 1786
I PAVK+ALTK YKQ SR VR ADL+ IPG KK P KRVA +L
Sbjct: 877 IQPAVKSALTKAYKQGSSSRVVRAADLV---NIPGMKK-PLKKRVAAIL 921
>ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group]
gi|122248776|sp|Q2R2B4.2|RFC1_ORYSJ RecName:
Full=Replication factor C subunit 1; Short=OsRFC1;
AltName: Full=Activator 1 large subunit; AltName:
Full=Activator 1 subunit 1 gi|108864532|gb|ABA94349.2|
BRCA1 C Terminus domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113645345|dbj|BAF28486.1| Os11g0572100 [Oryza sativa
Japonica Group] gi|215697840|dbj|BAG92033.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1021
Score = 670 bits (1729), Expect = 0.0
Identities = 352/589 (59%), Positives = 432/589 (73%), Gaps = 1/589 (0%)
Frame = +2
Query: 23 QNDNKSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKAETAMWTE 202
+ KS K+S K + GN+ + K N+ S ++ K + + WTE
Sbjct: 354 EKQQKSPMKSSPVK--VERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRG-SLQWTE 410
Query: 203 KYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSKKAVI 382
KYRPK PNDIVGNQ++VKQLH+WL +WE++ L++G+KGK G K+ +G +KKAV+
Sbjct: 411 KYRPKVPNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGK-GKKQADSG------AKKAVL 463
Query: 383 MSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGSTANSIKEMINNAT 562
+SGPPGIGKTT A++VSQMLG + IEVNASDSRGKADSKI KG+ GST+NSIKE+I+NAT
Sbjct: 464 LSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNAT 523
Query: 563 IHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXXNDRYSQKLKSL 739
++ + K+VL+MDEVDGMS GDRGGV+DL NDRYSQKLKSL
Sbjct: 524 LNYSNNRLKRPKAVLVMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSL 583
Query: 740 MNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSL 919
+N CL LNFRKPTKQQM KRL ++A+ EG++ E A+EEL ERV+GD+RMALN LQYMSL
Sbjct: 584 VNYCLLLNFRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSL 643
Query: 920 SFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLI 1099
S S +KY DI+ RL KDEDI+PFTA +KL G RLRMDE++DL MSDPDLVPL+I
Sbjct: 644 SQSVVKYDDIRQRLNSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLII 703
Query: 1100 QENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSI 1279
QENY+NY+P G+D G +RM+ ++RAA+SIAD DI+N QIRRY+QWQ SQ +SSI
Sbjct: 704 QENYINYRPITVGKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQLSQAACLSSSI 763
Query: 1280 IPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENL 1459
+P+A +HG REI GE+NFNRFG WLGK ST KN RLL D H HILAS L RE+L
Sbjct: 764 VPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILASQQANLDRESL 823
Query: 1460 RLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVELSKFQGHLDPLKG 1639
RLDYL+ LL QLT+PLKT+PKDEAVQ V++FMD YSLSQEDFDTIVELSKF+GH +P+ G
Sbjct: 824 RLDYLTLLLRQLTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDG 883
Query: 1640 IPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 1786
I PAVK+ALTK YKQ SR VR ADL+ IPG KK P KRVA +L
Sbjct: 884 IQPAVKSALTKAYKQGSSSRVVRAADLV---NIPGMKK-PLKKRVAAIL 928
>gb|EMJ00202.1| hypothetical protein PRUPE_ppa000922mg [Prunus persica]
Length = 961
Score = 667 bits (1722), Expect = 0.0
Identities = 347/585 (59%), Positives = 434/585 (74%), Gaps = 1/585 (0%)
Frame = +2
Query: 35 KSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKAETAMWTEKYRP 214
KS K + L S +K + +A + + ++ +++++ WTEKYRP
Sbjct: 305 KSPNKVASKSISLASSVSHKQLESDASHARRKKQPTEHSAST-----------WTEKYRP 353
Query: 215 KTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSKKAVIMSGP 394
K PNDI+GNQ++VKQLH+WL +W + L+TG K KKG N +++++KKAV++SG
Sbjct: 354 KVPNDIIGNQSLVKQLHDWLVHWHEQFLDTGNK-KKGK------NPTNSSAKKAVLLSGT 406
Query: 395 PGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGSTANSIKEMINNATIHR- 571
PGIGKTT+A+LVSQMLGF+TIEVNASDSRGKADSKI KGI GS ANSIKE+++N +
Sbjct: 407 PGIGKTTSAKLVSQMLGFQTIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNKALSMD 466
Query: 572 GLTNGGKKSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXXNDRYSQKLKSLMNSC 751
GL + K+VLIMDEVDGMS GDRGGV+DL NDRYSQKLKSL+N C
Sbjct: 467 GLKH--PKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPVICICNDRYSQKLKSLVNYC 524
Query: 752 LPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSA 931
L L+FRKPTKQQMAKRL Q+A EG+KV+E ALEEL E+VNGDMRMA+NQLQYMSLS S
Sbjct: 525 LLLSFRKPTKQQMAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSV 584
Query: 932 IKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENY 1111
IKY D++ RL KDEDI+PFTA +KL G + +LRMDE++DL MSDPDLVPLLIQENY
Sbjct: 585 IKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENY 644
Query: 1112 LNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSA 1291
+NY+P++A +D G +RM+LI+ AA+SI +GDI N QIR+Y+QWQ SQ +SSI P+A
Sbjct: 645 INYRPSSAVKDDSGIKRMNLIAHAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAA 704
Query: 1292 FIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDY 1471
+ G RE QGE+NFNRFG WLGKNST GKN+RLL D+HVH+LAS RE LR++Y
Sbjct: 705 LLRGQRETLEQGERNFNRFGGWLGKNSTLGKNSRLLEDLHVHLLASRESSSGRETLRVEY 764
Query: 1472 LSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVELSKFQGHLDPLKGIPPA 1651
LS LL +LT PL+ LPKDEAV V+DFM+ YS+SQ+DFDTIVELSKFQGH +PL GI PA
Sbjct: 765 LSLLLKRLTVPLRELPKDEAVHKVVDFMNTYSISQDDFDTIVELSKFQGHPNPLDGIQPA 824
Query: 1652 VKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 1786
VKAALTK YK+ ++R VR AD + +PG KKAPK KR+A +L
Sbjct: 825 VKAALTKAYKEGSKTRMVRAADFV---TLPGMKKAPK-KRIAAIL 865
>ref|XP_003575946.1| PREDICTED: replication factor C subunit 1-like [Brachypodium
distachyon]
Length = 1048
Score = 663 bits (1711), Expect = 0.0
Identities = 357/613 (58%), Positives = 436/613 (71%), Gaps = 10/613 (1%)
Frame = +2
Query: 2 KEPPNKEQNDN------KSTQKNSDSK--RQLTESSGNKDRDYNARNGKMNERSVQYNSN 157
K P NK + + KS K+S K R+ + ++ +++ K S Y
Sbjct: 369 KPPVNKHEMNKISEKLQKSPSKSSPVKVERRAVDQVSTINKSIASKSNK-ESASTDYQKA 427
Query: 158 KALQTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRT 337
K + + WTEKYRPK PNDIVGNQ++VKQLH+WL +WE + L++ +KGK G K+
Sbjct: 428 KIVDRGALQ---WTEKYRPKVPNDIVGNQSMVKQLHDWLKSWEGQFLHSAQKGK-GKKQI 483
Query: 338 GAGNKSSNTSKKAVIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGIS 517
G +KKAV++SGPPGIGKTT A++VSQMLG + IEVNASDSRGKADSKI KG+
Sbjct: 484 DGG------AKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVG 537
Query: 518 GSTANSIKEMINNATIHRGLTNGGK--KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXX 691
GST+NSIK +I+NAT++ N K K+VL+MDEVDGMS GDRGGV+DL
Sbjct: 538 GSTSNSIKVLISNATLNYS-DNRTKPPKAVLVMDEVDGMSAGDRGGVADLIASIKISKIP 596
Query: 692 XXXXXNDRYSQKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERV 871
NDRYSQKLKSL+N CL LNFRKPTKQQM KRL +A EGI+ E A+EEL ERV
Sbjct: 597 IVCICNDRYSQKLKSLVNYCLLLNFRKPTKQQMGKRLMDIARKEGIQAQENAMEELAERV 656
Query: 872 NGDMRMALNQLQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDE 1051
+GD+RMALN LQYMSLS S +KY DI+ RL KDEDI+PFTA +KL G RLRMDE
Sbjct: 657 HGDIRMALNHLQYMSLSQSVVKYDDIRLRLNSSAKDEDISPFTAVDKLFGFNGGRLRMDE 716
Query: 1052 KMDLCMSDPDLVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRR 1231
++DL MSDPDLVPL+IQENY+NY+P+A G+D G +RM+ ++RAA+SIADGDI+N QIRR
Sbjct: 717 RIDLSMSDPDLVPLIIQENYINYRPSAVGKDDSGVKRMNCLARAAESIADGDIVNVQIRR 776
Query: 1232 YQQWQHSQMGAFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVH 1411
Y+QWQ SQ ASSI+P+A +HG RE F GE+NFNRFG WLGK ST KN RLL DVH
Sbjct: 777 YRQWQLSQAACLASSIVPAALMHGNRETFEAGERNFNRFGGWLGKYSTTNKNKRLLEDVH 836
Query: 1412 VHILASSACELSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDT 1591
HILAS + RE LRLDYL+ LL QL +PLKT+PKDEAVQ V++FMD YSLSQEDFDT
Sbjct: 837 SHILASQQANVDREALRLDYLTLLLRQLADPLKTMPKDEAVQKVVEFMDTYSLSQEDFDT 896
Query: 1592 IVELSKFQGHLDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKR 1771
+VELSKF+GH +P+ GI AVK+ALTK YKQ SR VR+ADLI IPG +K P KR
Sbjct: 897 LVELSKFKGHPNPMDGIQAAVKSALTKAYKQGSSSRVVRSADLI---NIPGMRK-PLKKR 952
Query: 1772 VAKLLNTDEGEFP 1810
VA +L + P
Sbjct: 953 VAAILEPVDESVP 965
>ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutrema salsugineum]
gi|557101796|gb|ESQ42159.1| hypothetical protein
EUTSA_v10012587mg [Eutrema salsugineum]
Length = 962
Score = 661 bits (1706), Expect = 0.0
Identities = 346/591 (58%), Positives = 437/591 (73%), Gaps = 3/591 (0%)
Frame = +2
Query: 23 QNDNKSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKA-ETAM-W 196
+ NK T+K S + S K+ K++ V +S+ A K +T++ W
Sbjct: 293 ERTNKGTEKVSAQLK----ISPQKEETRGKLVAKISPNKVPPHSSPAKAKKKIIQTSLPW 348
Query: 197 TEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSKKA 376
TEKYRPK PN+IVGNQ++V QLH WL++W ++ TG KGK G K AG +KKA
Sbjct: 349 TEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGK-GKKLNDAG------AKKA 401
Query: 377 VIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGSTANSIKEMINN 556
V+MSG PGIGKTT+A+LVSQMLGF+ +EVNASDSRGKA+S I KGI GS AN++KE++NN
Sbjct: 402 VLMSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKELVNN 461
Query: 557 ATIHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXXNDRYSQKLK 733
I + K+VLIMDEVDGMS GDRGGV+DL NDRYSQKLK
Sbjct: 462 EAIAANIDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLK 521
Query: 734 SLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYM 913
SL+N CLPLNFRKPTKQQMAKRL +A+ EG++V+E ALEEL ERVNGD+R+ALNQLQYM
Sbjct: 522 SLVNYCLPLNFRKPTKQQMAKRLTHIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYM 581
Query: 914 SLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPL 1093
SLS S IKY DI+ RL KDEDI+PFTA +KL G +LRMDE++DL MSD DLVPL
Sbjct: 582 SLSMSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDFDLVPL 641
Query: 1094 LIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFAS 1273
L+QENYLNY+P++ G+D ++RM+L++RAA+SIADGDIIN QIRR++QWQ S AS
Sbjct: 642 LVQENYLNYRPSSTGKDE--AKRMELLARAAESIADGDIINVQIRRHRQWQLSLSSCVAS 699
Query: 1274 SIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRE 1453
SI+P++ +HG RE+ QGE+NFNRFG WLGKNST GKNTRLL D+HVH+LAS RE
Sbjct: 700 SILPASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNTRLLEDLHVHVLASRESSSGRE 759
Query: 1454 NLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVELSKFQGHLDPL 1633
+R+DYL LL +LT+PL+TLPKDEAV V++FM+ YS+SQEDFDTI+EL+KF+G +PL
Sbjct: 760 TIRVDYLPLLLNRLTSPLQTLPKDEAVSEVVEFMNSYSISQEDFDTIMELAKFKGRANPL 819
Query: 1634 KGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 1786
+G+PPAVK+ALTK Y + ++R VR AD++ Q+PG KKAPK KR+A +L
Sbjct: 820 EGVPPAVKSALTKKYNETNKTRMVRAADMV---QLPGMKKAPK-KRIAAML 866
>dbj|BAJ33988.1| unnamed protein product [Thellungiella halophila]
Length = 933
Score = 661 bits (1706), Expect = 0.0
Identities = 346/591 (58%), Positives = 437/591 (73%), Gaps = 3/591 (0%)
Frame = +2
Query: 23 QNDNKSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKA-ETAM-W 196
+ NK T+K S + S K+ K++ V +S+ A K +T++ W
Sbjct: 264 ERTNKGTEKVSAQLK----ISPQKEETRGKLVAKISPNKVPPHSSPAKAKKKIIQTSLPW 319
Query: 197 TEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSKKA 376
TEKYRPK PN+IVGNQ++V QLH WL++W ++ TG KGK G K AG +KKA
Sbjct: 320 TEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGK-GKKLNDAG------AKKA 372
Query: 377 VIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGSTANSIKEMINN 556
V+MSG PGIGKTT+A+LVSQMLGF+ +EVNASDSRGKA+S I KGI GS AN++KE++NN
Sbjct: 373 VLMSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKELVNN 432
Query: 557 ATIHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXXNDRYSQKLK 733
I + K+VLIMDEVDGMS GDRGGV+DL NDRYSQKLK
Sbjct: 433 EAIAANIDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLK 492
Query: 734 SLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYM 913
SL+N CLPLNFRKPTKQQMAKRL +A+ EG++V+E ALEEL ERVNGD+R+ALNQLQYM
Sbjct: 493 SLVNYCLPLNFRKPTKQQMAKRLTHIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYM 552
Query: 914 SLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPL 1093
SLS S IKY DI+ RL KDEDI+PFTA +KL G +LRMDE++DL MSD DLVPL
Sbjct: 553 SLSMSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDFDLVPL 612
Query: 1094 LIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFAS 1273
L+QENYLNY+P++ G+D ++RM+L++RAA+SIADGDIIN QIRR++QWQ S AS
Sbjct: 613 LVQENYLNYRPSSTGKDE--AKRMELLARAAESIADGDIINVQIRRHRQWQLSLSSCVAS 670
Query: 1274 SIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRE 1453
SI+P++ +HG RE+ QGE+NFNRFG WLGKNST GKNTRLL D+HVH+LAS RE
Sbjct: 671 SILPASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNTRLLEDLHVHVLASRESSSGRE 730
Query: 1454 NLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVELSKFQGHLDPL 1633
+R+DYL LL +LT+PL+TLPKDEAV V++FM+ YS+SQEDFDTI+EL+KF+G +PL
Sbjct: 731 TIRVDYLPLLLNRLTSPLQTLPKDEAVSEVVEFMNSYSISQEDFDTIMELAKFKGRANPL 790
Query: 1634 KGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 1786
+G+PPAVK+ALTK Y + ++R VR AD++ Q+PG KKAPK KR+A +L
Sbjct: 791 EGVPPAVKSALTKKYNETNKTRMVRAADMV---QLPGMKKAPK-KRIAAML 837
>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 981
Score = 660 bits (1703), Expect = 0.0
Identities = 351/600 (58%), Positives = 431/600 (71%), Gaps = 1/600 (0%)
Frame = +2
Query: 2 KEPPNKEQNDNKSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKA 181
K PP ++ + + S +K+ + +D A ++S T++
Sbjct: 297 KAPPRQDPKKSVVKSEESPTKKNFQKVQAKSHKDLAAGASPAKQKS---------GTAEF 347
Query: 182 ETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSN 361
WTEKYRPK PNDI+GNQ++VKQLH+WLA+W L+ G K KK K + +G
Sbjct: 348 SNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSK-KKVKKASDSG----- 401
Query: 362 TSKKAVIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGSTANSIK 541
+KKAV++ G PGIGKTT+A+LVSQMLGFE IEVNASD+RGK+D+KI KGI GS ANSIK
Sbjct: 402 -AKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIK 460
Query: 542 EMINNATIHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXXNDRY 718
E+I+N ++H + K+VLIMDEVDGMS GDRGGV+DL NDRY
Sbjct: 461 ELISNESLHFKMNQPKHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRY 520
Query: 719 SQKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALN 898
SQKLKSL+N CL L+FRKPTKQQMAKRL QVA EG++V+E ALEEL ERVNGDMRMALN
Sbjct: 521 SQKLKSLVNYCLILSFRKPTKQQMAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALN 580
Query: 899 QLQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDP 1078
QLQY+SLS S IKY DI+ RL KDEDI+PFTA +KL G S +LRMDE++DL MSD
Sbjct: 581 QLQYLSLSMSVIKYDDIRQRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDL 640
Query: 1079 DLVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQM 1258
DLVPLLIQENY+NY+P+A +D G +RMDLI+RAA+SIADGDIIN QIRR++QWQ SQ
Sbjct: 641 DLVPLLIQENYINYRPSAVSKDDTGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQS 700
Query: 1259 GAFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSAC 1438
AS IIP++ +HG RE Q E+NFNRFGAWLGKNSTFGKN RLL D+HVHILAS
Sbjct: 701 SCVASCIIPASLLHGQRETLEQYERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRES 760
Query: 1439 ELSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVELSKFQG 1618
RE+LR++ L+ L +LT PL TLPKDEAV+ V++FM YS+SQEDFDT++ELSKFQG
Sbjct: 761 CSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQG 820
Query: 1619 HLDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDE 1798
+PL G+ PAVKAALTK YK+ ++ VR ADLI +PG KKAPK KR+A +L E
Sbjct: 821 RKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLI---ALPGMKKAPK-KRIAAILEPTE 876
>ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319877|gb|EFH50299.1| AAA-type ATPase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 960
Score = 659 bits (1699), Expect = 0.0
Identities = 348/584 (59%), Positives = 428/584 (73%), Gaps = 1/584 (0%)
Frame = +2
Query: 38 STQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKAETAMWTEKYRPK 217
S QK + L +SS NK GK K ++TS WTEKYRPK
Sbjct: 311 SPQKEETRGKPLAKSSPNK---VPPAKGK----------KKIIETSLP----WTEKYRPK 353
Query: 218 TPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSKKAVIMSGPP 397
PN+IVGNQ++V QLH WL++W ++ TG KGK G K AG +KKAV++SG P
Sbjct: 354 VPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGK-GKKLNDAG------AKKAVLLSGTP 406
Query: 398 GIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGSTANSIKEMINNATIHRGL 577
GIGKTT+A+LVSQMLGF+ +EVNASDSRGKA+S I KGI GS AN++KE++NN + L
Sbjct: 407 GIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEAMAANL 466
Query: 578 TNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXXNDRYSQKLKSLMNSCL 754
K+VLIMDEVDGMS GDRGGV+DL NDRYSQKLKSL+N CL
Sbjct: 467 DRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCL 526
Query: 755 PLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAI 934
PLN+RKPTKQQMAKRL +A+ EG++++E ALEEL ERVNGD+R+ALNQLQYMSLS SAI
Sbjct: 527 PLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLALNQLQYMSLSMSAI 586
Query: 935 KYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYL 1114
KY DI+ RL KDEDI+PFTA +KL G +LRMDE++DL MSDPDLVPLLIQENYL
Sbjct: 587 KYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYL 646
Query: 1115 NYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAF 1294
NY+P+ D ++RMDL++ AA+SIADGDIIN QIRRY+QWQ SQ ASSI+P++
Sbjct: 647 NYRPSGK----DEAKRMDLLALAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASL 702
Query: 1295 IHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYL 1474
+HG RE+ QGE+NFNRFG WLGKNST GKN RL+ D+HVH+LAS RE LR+DYL
Sbjct: 703 LHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRETLRVDYL 762
Query: 1475 SALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVELSKFQGHLDPLKGIPPAV 1654
S LL++LT+PL+TLPKDEAV V+DFM+ YS+SQEDFDTI+EL KF+G +PL+G+PP V
Sbjct: 763 SLLLSRLTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTIMELGKFKGRENPLEGVPPPV 822
Query: 1655 KAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 1786
KAALTK Y + ++R VR AD++ Q+PG KKAPK KR+A +L
Sbjct: 823 KAALTKKYNEMNKTRMVRVADMV---QLPGVKKAPK-KRIAAML 862
>ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 942
Score = 658 bits (1698), Expect = 0.0
Identities = 350/565 (61%), Positives = 420/565 (74%), Gaps = 6/565 (1%)
Frame = +2
Query: 122 KMNERSVQYNSNKALQTSKAETA-----MWTEKYRPKTPNDIVGNQTIVKQLHEWLANWE 286
K E + N K SK+ TA WTEKYRPK PNDI+GNQ++VKQLH+WLA+W
Sbjct: 297 KSEESPTKKNFQKVQAKSKSGTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWN 356
Query: 287 NEHLNTGEKGKKGNKRTGAGNKSSNTSKKAVIMSGPPGIGKTTAARLVSQMLGFETIEVN 466
L+ G K KK K + +G +KKAV++ G PGIGKTT+A+LVSQMLGFE IEVN
Sbjct: 357 ENFLDVGSK-KKVKKASDSG------AKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVN 409
Query: 467 ASDSRGKADSKIVKGISGSTANSIKEMINNATIHRGLTNGGK-KSVLIMDEVDGMSGGDR 643
ASD+RGK+D+KI KGI GS ANSIKE+I+N ++H + K+VLIMDEVDGMS GDR
Sbjct: 410 ASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMNQPKHHKTVLIMDEVDGMSAGDR 469
Query: 644 GGVSDLXXXXXXXXXXXXXXXNDRYSQKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELE 823
GGV+DL NDRYSQKLKSL+N CL L+FRKPTKQQMAKRL QVA E
Sbjct: 470 GGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLVQVANAE 529
Query: 824 GIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTA 1003
G++V+E ALEEL ERVNGDMRMALNQLQY+SLS S IKY DI+ RL KDEDI+PFTA
Sbjct: 530 GLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSKKDEDISPFTA 589
Query: 1004 ANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRA 1183
+KL G S +LRMDE++DL MSD DLVPLLIQENY+NY+P+A +D G +RMDLI+RA
Sbjct: 590 VDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSAVSKDDTGIKRMDLIARA 649
Query: 1184 ADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLG 1363
A+SIADGDIIN QIRR++QWQ SQ AS IIP++ +HG RE Q E+NFNRFGAWLG
Sbjct: 650 AESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASLLHGQRETLEQYERNFNRFGAWLG 709
Query: 1364 KNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAV 1543
KNSTFGKN RLL D+HVHILAS RE+LR++ L+ L +LT PL TLPKDEAV+ V
Sbjct: 710 KNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTV 769
Query: 1544 IDFMDEYSLSQEDFDTIVELSKFQGHLDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLI 1723
++FM YS+SQEDFDT++ELSKFQG +PL G+ PAVKAALTK YK+ ++ VR ADLI
Sbjct: 770 VEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLI 829
Query: 1724 PALQIPGQKKAPKTKRVAKLLNTDE 1798
+PG KKAPK KR+A +L E
Sbjct: 830 ---ALPGMKKAPK-KRIAAILEPTE 850
>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
gi|75168909|sp|Q9C587.1|RFC1_ARATH RecName:
Full=Replication factor C subunit 1; Short=AtRFC1;
AltName: Full=Activator 1 large subunit; AltName:
Full=Activator 1 subunit 1 gi|13374860|emb|CAC34494.1|
replication factor C large subunit-like protein
[Arabidopsis thaliana] gi|48958527|gb|AAT47816.1|
At5g22010 [Arabidopsis thaliana]
gi|332005585|gb|AED92968.1| replication factor C1
[Arabidopsis thaliana]
Length = 956
Score = 658 bits (1697), Expect = 0.0
Identities = 337/545 (61%), Positives = 415/545 (76%), Gaps = 1/545 (0%)
Frame = +2
Query: 155 NKALQTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKR 334
NK ++TS WTEKYRPK PN+IVGNQ++V QLH WL++W ++ TG KGK G K
Sbjct: 333 NKIIETSLP----WTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGK-GKKL 387
Query: 335 TGAGNKSSNTSKKAVIMSGPPGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGI 514
AG SKKAV++SG PGIGKTT+A+LVSQMLGF+ +EVNASDSRGKA+S I KGI
Sbjct: 388 NDAG------SKKAVLLSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGI 441
Query: 515 SGSTANSIKEMINNATIHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXX 691
GS ANS+KE++NN + K+VLIMDEVDGMS GDRGGV+DL
Sbjct: 442 GGSNANSVKELVNNEAMAANFDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIP 501
Query: 692 XXXXXNDRYSQKLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERV 871
NDRYSQKLKSL+N CLPLN+RKPTKQQMAKRL +A+ EG++++E ALEEL ERV
Sbjct: 502 IICICNDRYSQKLKSLVNYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERV 561
Query: 872 NGDMRMALNQLQYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDE 1051
NGD+R+A+NQLQYMSLS S IKY DI+ RL KDEDI+PFTA +KL G +LRMDE
Sbjct: 562 NGDIRLAVNQLQYMSLSMSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDE 621
Query: 1052 KMDLCMSDPDLVPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRR 1231
++DL MSDPDLVPLLIQENYLNY+P+ D ++RMDL++RAA+SIADGDIIN QIRR
Sbjct: 622 RIDLSMSDPDLVPLLIQENYLNYRPSGK----DEAKRMDLLARAAESIADGDIINVQIRR 677
Query: 1232 YQQWQHSQMGAFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVH 1411
Y+QWQ SQ ASSI+P++ +HG RE+ QGE+NFNRFG WLGKNST GKN RL+ D+H
Sbjct: 678 YRQWQLSQSCCVASSILPASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLH 737
Query: 1412 VHILASSACELSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDT 1591
VH+LAS RE LR+DYL LL++LT+PL+TLPKDEAV V+DFM+ YS+SQEDFDT
Sbjct: 738 VHVLASRESSAGRETLRVDYLPLLLSRLTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDT 797
Query: 1592 IVELSKFQGHLDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKR 1771
I+EL KF+G +P++G+PP VKAALTK Y + ++R VR AD++ Q+PG KKAPK KR
Sbjct: 798 ILELGKFKGRENPMEGVPPPVKAALTKKYNEMNKTRMVRVADMV---QLPGVKKAPK-KR 853
Query: 1772 VAKLL 1786
+A +L
Sbjct: 854 IAAML 858
>ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Populus trichocarpa]
gi|550347876|gb|EEE82965.2| hypothetical protein
POPTR_0001s22140g [Populus trichocarpa]
Length = 981
Score = 657 bits (1695), Expect = 0.0
Identities = 349/603 (57%), Positives = 438/603 (72%), Gaps = 14/603 (2%)
Frame = +2
Query: 35 KSTQKNSDSKRQLTESSGNKDRDYNARNGKMNERSVQYNSNKALQTSKAETAMWTEKYRP 214
KS QK L ++ +KD ++ K ++++Q +S +WTEKYRP
Sbjct: 303 KSPQKADLKSSSLMSNATHKDLGAGSQQAKQKDQAIQRSS-----------LIWTEKYRP 351
Query: 215 KTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSKKAVIMSGP 394
K PN+++GN ++V QLH WL NW + +TG KGK G K+ + +T+KKAV++SGP
Sbjct: 352 KVPNEMIGNPSLVTQLHNWLKNWNEQFHDTGNKGK-GKKQ------NDSTAKKAVLLSGP 404
Query: 395 PGIGKTTAARLVSQMLGFETIEVNASDSRGKADSKIVKGISGSTANSIKEMINNATIHRG 574
PGIGKTT+A+LVS+MLGF+ IEVNASD+RGKAD+KI KGISGS AN IKE+I+N +
Sbjct: 405 PGIGKTTSAKLVSKMLGFQAIEVNASDNRGKADAKIFKGISGSNANCIKELISNEALGFE 464
Query: 575 LTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXXNDRYSQKLKSLMNSC 751
+ K+VLIMDEVDGMS GDRGGV+DL NDRYSQKLKSL+N C
Sbjct: 465 MDRSKHLKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYC 524
Query: 752 LPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSA 931
L L+FRKPTKQQMAKRL QVA EG++V+E ALEEL ERVNGDMRMALNQLQYMSLS S
Sbjct: 525 LLLSFRKPTKQQMAKRLTQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSV 584
Query: 932 IKYADIKSRLKDGGKDEDITPFTAANKLL----------GVESSRLRMDEKMDLCMSDPD 1081
I Y D++ RL+ KDEDI+PFTA + +L G +LRMDE++DL MSDPD
Sbjct: 585 INYDDVRQRLQGSAKDEDISPFTAVDNMLLIVIFGVRLFGFSGGKLRMDERIDLSMSDPD 644
Query: 1082 LVP--LLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQ 1255
L ++ QENY+NY+P++ G+D +G +RM LI+RAA+SIADGDIIN QIRRY+QWQ SQ
Sbjct: 645 LEADSVIWQENYINYRPSSIGKDDNGMKRMSLIARAAESIADGDIINVQIRRYRQWQLSQ 704
Query: 1256 MGAFASSIIPSAFIHGYREIFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSA 1435
G+ +S IIP+A +HG RE QGE+NFNRFG WLGKNST GKN+RLL D+HVH+LAS
Sbjct: 705 TGSLSSCIIPAALLHGSRETLEQGERNFNRFGGWLGKNSTAGKNSRLLEDLHVHLLASRE 764
Query: 1436 CELSRENLRLDYLSALLTQLTNPLKTLPKDEAVQAVIDFMDEYSLSQEDFDTIVELSKFQ 1615
+ RE LRLDYL+ LL QLT+PL+ LPKDEAV+ V++FM+ YS+SQED DTIVELSKFQ
Sbjct: 765 SNMGRETLRLDYLTVLLKQLTDPLRVLPKDEAVEKVVEFMNVYSISQEDMDTIVELSKFQ 824
Query: 1616 GHLDPLKGIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLN-T 1792
GH +PL GIP VKAALT+ YK+ +SR VR ADL+ +PG+KKAPK KRVA +L +
Sbjct: 825 GHGNPLDGIPSTVKAALTRAYKEERKSRMVRAADLV---TLPGKKKAPK-KRVAAILEPS 880
Query: 1793 DEG 1801
D+G
Sbjct: 881 DDG 883