BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00002150
         (422 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002974435.1| hypothetical protein SELMODRAFT_101161 [Sela...    62   8e-08
ref|XP_002985732.1| hypothetical protein SELMODRAFT_122762 [Sela...    62   8e-08
ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [A...    62   1e-07
ref|XP_006390745.1| hypothetical protein EUTSA_v10018219mg [Eutr...    58   1e-06
ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    57   3e-06
emb|CBI29360.3| unnamed protein product [Vitis vinifera]               57   3e-06
emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]    57   3e-06
gb|EIW51732.1| polyadenylate binding protein [Trametes versicolo...    56   4e-06
gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]       56   4e-06
gb|EJD52935.1| polyadenylate binding protein [Auricularia delica...    56   6e-06
ref|XP_006359024.1| PREDICTED: polyadenylate-binding protein 3-l...    55   7e-06
gb|EMJ28161.1| hypothetical protein PRUPE_ppa002618mg [Prunus pe...    55   7e-06
ref|XP_004253267.1| PREDICTED: polyadenylate-binding protein 5-l...    55   7e-06
ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arab...    55   7e-06
gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding...    55   1e-05
gb|EPQ58026.1| polyadenylate binding protein [Gloeophyllum trabe...    55   1e-05
gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]          55   1e-05
gb|EIM90106.1| polyadenylate binding protein [Stereum hirsutum F...    55   1e-05
ref|NP_177322.2| polyadenylate-binding protein 5 [Arabidopsis th...    55   1e-05
ref|XP_005844200.1| hypothetical protein CHLNCDRAFT_59028 [Chlor...    55   1e-05

>ref|XP_002974435.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
           gi|300158033|gb|EFJ24657.1| hypothetical protein
           SELMODRAFT_101161 [Selaginella moellendorffii]
          Length = 642

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/41 (78%), Positives = 34/41 (82%), Gaps = 4/41 (9%)
 Frame = +2

Query: 311 AAPN----ASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           AAPN     SLYVGDLD +VTE QLYDVFN+VAPVLSIRVC
Sbjct: 29  AAPNQFFSTSLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVC 69


>ref|XP_002985732.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
           gi|300146641|gb|EFJ13310.1| hypothetical protein
           SELMODRAFT_122762 [Selaginella moellendorffii]
          Length = 635

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/41 (78%), Positives = 34/41 (82%), Gaps = 4/41 (9%)
 Frame = +2

Query: 311 AAPN----ASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           AAPN     SLYVGDLD +VTE QLYDVFN+VAPVLSIRVC
Sbjct: 29  AAPNQFFSTSLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVC 69


>ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [Amborella trichopoda]
           gi|548844219|gb|ERN03845.1| hypothetical protein
           AMTR_s00078p00149860 [Amborella trichopoda]
          Length = 645

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 26/35 (74%), Positives = 33/35 (94%)
 Frame = +2

Query: 317 PNASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           PNASLYVGDLD SVTE+Q++D+FN +APV+S+RVC
Sbjct: 16  PNASLYVGDLDPSVTETQIFDLFNSIAPVVSVRVC 50


>ref|XP_006390745.1| hypothetical protein EUTSA_v10018219mg [Eutrema salsugineum]
           gi|557087179|gb|ESQ28031.1| hypothetical protein
           EUTSA_v10018219mg [Eutrema salsugineum]
          Length = 685

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +2

Query: 311 AAPNASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           A PN+SLYVGDLDQSV E+ L D+FN+VAPV ++RVC
Sbjct: 55  AHPNSSLYVGDLDQSVNEAHLLDLFNQVAPVQTVRVC 91


>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
           [Vitis vinifera]
          Length = 1093

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +2

Query: 320 NASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           NASLYVGDLD ++ E QLYD+F +VAPVLSIRVC
Sbjct: 472 NASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVC 505


>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +2

Query: 320 NASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           NASLYVGDLD ++ E QLYD+F +VAPVLSIRVC
Sbjct: 12  NASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVC 45


>emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
          Length = 632

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +2

Query: 320 NASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           NASLYVGDLD ++ E QLYD+F +VAPVLSIRVC
Sbjct: 38  NASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVC 71


>gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
          Length = 631

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +2

Query: 311 AAPNASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           AAP+ASLYVG+LD +VTE+ L+++FN + PV SIRVC
Sbjct: 3   AAPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVC 39


>gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
          Length = 658

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = +2

Query: 326 SLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           SLYVGDLDQSVT+SQLYD+FN+V  V+S+RVC
Sbjct: 41  SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVC 72


>gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
          Length = 665

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = +2

Query: 311 AAPNASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           A P+ASLYVG+LD SVTE+ L++VFN + PV SIRVC
Sbjct: 43  APPSASLYVGELDPSVTEAMLFEVFNMIGPVASIRVC 79


>ref|XP_006359024.1| PREDICTED: polyadenylate-binding protein 3-like [Solanum tuberosum]
          Length = 648

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +2

Query: 326 SLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           SLYVGDLD +V E QLY+VFN+VAPVLS+RVC
Sbjct: 48  SLYVGDLDTTVDEGQLYEVFNQVAPVLSVRVC 79


>gb|EMJ28161.1| hypothetical protein PRUPE_ppa002618mg [Prunus persica]
           gi|462423899|gb|EMJ28162.1| hypothetical protein
           PRUPE_ppa002618mg [Prunus persica]
          Length = 651

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/34 (70%), Positives = 31/34 (91%)
 Frame = +2

Query: 320 NASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           + SLYVGDLDQ+VT+SQLYD+FN+V  V+S+RVC
Sbjct: 31  STSLYVGDLDQNVTDSQLYDLFNQVGQVVSVRVC 64


>ref|XP_004253267.1| PREDICTED: polyadenylate-binding protein 5-like [Solanum
           lycopersicum]
          Length = 649

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +2

Query: 326 SLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           SLYVGDLD +V E QLY+VFN+VAPVLS+RVC
Sbjct: 49  SLYVGDLDTAVDEGQLYEVFNQVAPVLSVRVC 80


>ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
           lyrata] gi|297334687|gb|EFH65105.1| hypothetical protein
           ARALYDRAFT_339396 [Arabidopsis lyrata subsp. lyrata]
          Length = 685

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +2

Query: 317 PNASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           PN+SLYVGDLD SV E QL D+FN+VAPV ++RVC
Sbjct: 56  PNSSLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVC 90


>gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
           Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
          Length = 668

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +2

Query: 317 PNASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           PN+SLYVGDLD SV ES L D+FN+VAPV ++RVC
Sbjct: 43  PNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVC 77


>gb|EPQ58026.1| polyadenylate binding protein [Gloeophyllum trabeum ATCC 11539]
          Length = 685

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = +2

Query: 311 AAPNASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           +AP+ASLYVG+LD +VTE+ L+++FN + PV SIRVC
Sbjct: 49  SAPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVC 85


>gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
          Length = 668

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +2

Query: 317 PNASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           PN+SLYVGDLD SV ES L D+FN+VAPV ++RVC
Sbjct: 43  PNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVC 77


>gb|EIM90106.1| polyadenylate binding protein [Stereum hirsutum FP-91666 SS1]
          Length = 682

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = +2

Query: 311 AAPNASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           +AP+ASLYVG+LD +VTE+ L+++FN + PV SIRVC
Sbjct: 40  SAPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVC 76


>ref|NP_177322.2| polyadenylate-binding protein 5 [Arabidopsis thaliana]
           gi|334183841|ref|NP_001185373.1| polyadenylate-binding
           protein 5 [Arabidopsis thaliana]
           gi|322510110|sp|Q05196.3|PABP5_ARATH RecName:
           Full=Polyadenylate-binding protein 5; Short=PABP-5;
           Short=Poly(A)-binding protein 5
           gi|332197109|gb|AEE35230.1| polyadenylate-binding
           protein 5 [Arabidopsis thaliana]
           gi|332197110|gb|AEE35231.1| polyadenylate-binding
           protein 5 [Arabidopsis thaliana]
          Length = 682

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +2

Query: 317 PNASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           PN+SLYVGDLD SV ES L D+FN+VAPV ++RVC
Sbjct: 57  PNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVC 91


>ref|XP_005844200.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
           gi|307103841|gb|EFN52098.1| hypothetical protein
           CHLNCDRAFT_59028 [Chlorella variabilis]
          Length = 634

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +2

Query: 311 AAPNASLYVGDLDQSVTESQLYDVFNRVAPVLSIRVC 421
           A  N+SLYVGDLD+ VTE+QL++VF+++ PV SIRVC
Sbjct: 34  ATHNSSLYVGDLDRDVTEAQLFEVFSQIGPVASIRVC 70