BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00002127
         (3173 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [A...   683   0.0  
emb|CBI19367.3| unnamed protein product [Vitis vinifera]              674   0.0  
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   670   0.0  
gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Mor...   647   0.0  
ref|XP_006644254.1| PREDICTED: pre-mRNA-processing protein 40A-l...   646   0.0  
ref|XP_006644253.1| PREDICTED: pre-mRNA-processing protein 40A-l...   646   0.0  
gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus pe...   646   0.0  
gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobr...   645   0.0  
gb|EEE54732.1| hypothetical protein OsJ_02081 [Oryza sativa Japo...   644   0.0  
gb|EOY15665.1| Pre-mRNA-processing protein 40A isoform 5 [Theobr...   639   e-180
gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobr...   639   e-180
ref|XP_002320019.2| FF domain-containing family protein [Populus...   639   e-180
ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-l...   636   e-179
ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-l...   636   e-179
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l...   636   e-179
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l...   627   e-176
ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-l...   626   e-176
ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-l...   622   e-175
ref|XP_003549369.2| PREDICTED: pre-mRNA-processing protein 40A-l...   621   e-175
ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-l...   617   e-173

>ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [Amborella trichopoda]
            gi|548831471|gb|ERM94279.1| hypothetical protein
            AMTR_s00010p00227470 [Amborella trichopoda]
          Length = 985

 Score =  683 bits (1763), Expect = 0.0
 Identities = 369/710 (51%), Positives = 459/710 (64%), Gaps = 11/710 (1%)
 Frame = +2

Query: 548  SYNASQQWAPPAQNN---IQPVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAH 718
            S +  Q W      +   I PV    QQ +   STAP    P  N   Q++SDWQEHT+ 
Sbjct: 163  SGSGGQPWLSSGSQSTTVIPPVVQASQQSSFAASTAP-VATPQPNPTSQSSSDWQEHTSA 221

Query: 719  DGRRYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIP 898
            DGRRYYYN+KT++SSWEKP ELMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP
Sbjct: 222  DGRRYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIP 281

Query: 899  DELKMAREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPN 1078
            DELK+AREQAEK    ++  NSE +                      + +S   T TVP 
Sbjct: 282  DELKLAREQAEKNGTQLT--NSETTDV--------------------VASSTPVTVTVPL 319

Query: 1079 TSIVTPKIASPATP-VLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSAL 1255
            T + +   A  AT   +PS     TS V                          T V ++
Sbjct: 320  TEMPSTVAAISATQSAMPSTSGMATSPV------------------------LVTPVVSV 355

Query: 1256 PNSTVETNSSTML-------NSDKDCVKEEKDSEINEKDLEEAKKTMPVTGKVNVTPLSV 1414
            P + V+ +S+          N   + + +  D E + +DLEEA+K MPV GKVN+TP S 
Sbjct: 356  PAAAVDPSSAGAAYEKIKVDNVSPESIAQVAD-ETSAQDLEEARKAMPVAGKVNITPTSD 414

Query: 1415 EKAADEEPLVYATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQ 1594
            EK  DEEPLV+A+K EAKNAFKELL S HVESDWTWDQAMRVIINDKRYGALKTLGE+KQ
Sbjct: 415  EKTVDEEPLVFASKQEAKNAFKELLVSAHVESDWTWDQAMRVIINDKRYGALKTLGERKQ 474

Query: 1595 AFNEYLTHRKKQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLAV 1774
            AFNEYL  RKK EAEE+R +QK+A+EDF++MLEE KELTS  +WSK   +FE+D+RF AV
Sbjct: 475  AFNEYLGQRKKLEAEEKRTRQKKAREDFVKMLEESKELTSATKWSKAITMFEDDERFRAV 534

Query: 1775 XXXXXXXXLFLSHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSWRKVQDRIA 1954
                    LF  HL                 N+ EYRAFLESCDFIK +S WRKVQDR+ 
Sbjct: 535  ERGRDREELFEMHLEELHRKERAKAQEEHRRNVQEYRAFLESCDFIKASSQWRKVQDRLE 594

Query: 1955 DDERFSRLDNLDRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRKLLEEHKEI 2134
            DDER +RL+ +DRLE+F+EYIRDL              LRR ERKNRD+FRKL+E H   
Sbjct: 595  DDERCARLEKIDRLEIFQEYIRDLEKEEEEQRKLQKEHLRRAERKNRDDFRKLMEGHIAA 654

Query: 2135 GLLTAKTHWHDYCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDKQYHDDKARIKDAM 2314
            G+LTAKTHW +YC KVK+ PAYLAV+SNTSGS PK+LFED  E+LDKQY +D+ RIKDA+
Sbjct: 655  GILTAKTHWREYCMKVKDLPAYLAVSSNTSGSTPKDLFEDTAEELDKQYQEDRTRIKDAV 714

Query: 2315 KMGKIVVASTWNLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXXXXXXXXLA 2494
            KM + V+ STW+ E FK++ISE ++LKS+SE N+KLVFDE++                +A
Sbjct: 715  KMARFVMTSTWSFENFKEAISEDNNLKSISETNLKLVFDELLERLKEKEEKEAKKRQRMA 774

Query: 2495 DEFTDLLHSTKEITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDEYIS 2644
            D+  DLL+S K+I+ SS WE+CK LLE+ + YR+I +E+F R+IF+EY++
Sbjct: 775  DDLKDLLYSIKDISASSRWEECKPLLEENQAYRSINDESFARQIFEEYVA 824



 Score = 61.2 bits (147), Expect = 3e-06
 Identities = 28/38 (73%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +2

Query: 3020 HTSDRKKS--RKHGYDSGSDSESRHKRHKRERDGSRRN 3127
            HTSDRK+S  ++HGY+S S SESRHKRH+R+RDGSRRN
Sbjct: 933  HTSDRKRSSRKQHGYESESGSESRHKRHRRDRDGSRRN 970


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  674 bits (1739), Expect = 0.0
 Identities = 360/691 (52%), Positives = 446/691 (64%), Gaps = 5/691 (0%)
 Frame = +2

Query: 593  IQPVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEK 772
            + PV    QQP+    TA  P     N   Q++SDWQEHT+ DGRRYYYN+KT+ SSWEK
Sbjct: 191  VTPVHQAGQQPSV---TADIPAGNVPNPTHQSSSDWQEHTSADGRRYYYNKKTRLSSWEK 247

Query: 773  PFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVS 952
            P ELMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+ELK+AREQAEK+  V  
Sbjct: 248  PLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKS--VSQ 305

Query: 953  SGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSIVTPKIASPATPVL-- 1126
               SEM                        TASV  ++T  +T         P TPV+  
Sbjct: 306  ETQSEMGTTSNEPAVVAVSLAETPS-----TASVSVSSTTSSTISGMTSSPVPVTPVVAV 360

Query: 1127 ---PSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSALPNSTVETNSSTMLN 1297
               P  + S TS +P                   P     +  + +  + +  N+++M +
Sbjct: 361  VNPPPVVVSGTSAIPIAQSAVTTSAVGVQPSMGTPLPAAVSGSTGVAAAFINPNATSMTS 420

Query: 1298 SDKDCVKEEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAF 1477
             +   +  +  +  + +D+EEAKK + V GK+NVTPL  EK  D+EPLVY+TK+EAKNAF
Sbjct: 421  FEN--LSADATNGASMQDIEEAKKGVAVAGKINVTPLE-EKTLDDEPLVYSTKLEAKNAF 477

Query: 1478 KELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQ 1657
            K LLES +VESDWTWDQAM+ IINDKRYGALKTLGE+KQAFNEYL  RKK EAEERR++Q
Sbjct: 478  KALLESANVESDWTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQ 537

Query: 1658 KRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXLFLSHLXXXXXXX 1837
            K+A+E+F  MLEECKELTS  +WSK   +F++D+RF AV        LF + +       
Sbjct: 538  KKAREEFTTMLEECKELTSSIKWSKAVDMFQDDERFKAVERSRDREDLFENFIMELQKKE 597

Query: 1838 XXXXXXXXXXNIAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLDNLDRLEVFEEYI 2017
                      N  EYR FLESCDFIKVNS WRKVQDR+ DDER SRL+ +DRLE+F+EYI
Sbjct: 598  RTKALEEQKRNRMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYI 657

Query: 2018 RDLXXXXXXXXXXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHWHDYCQKVKEHPA 2197
            RDL             QLRR ERKNRDEFRKL+EEH   G LTAKTHW DYC KVK+   
Sbjct: 658  RDLEREEEEQRKIQKEQLRRAERKNRDEFRKLMEEHVAAGTLTAKTHWRDYCMKVKDSSP 717

Query: 2198 YLAVTSNTSGSRPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVASTWNLEMFKDSIS 2377
            YLAV SNTSGS PK+LFED+ E+L+KQYH+DKARIKDAMK+ K+ +ASTW    FK +I 
Sbjct: 718  YLAVASNTSGSTPKDLFEDVAEELEKQYHEDKARIKDAMKLSKVTIASTWTFGDFKAAIL 777

Query: 2378 EVSDLKSLSEANIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHSTKEITVSSHWED 2557
            +     ++S+ N+KLVF+E++                LAD+F DLL S KEIT SS+WED
Sbjct: 778  DDVGSPNISDVNLKLVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRSKKEITASSNWED 837

Query: 2558 CKLLLEDCKEYRAITEENFRREIFDEYISRM 2650
            CK L E+ +EYR+I EE+F REIF+EYI+ +
Sbjct: 838  CKPLFEESQEYRSIGEESFGREIFEEYIAHL 868


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score =  670 bits (1729), Expect = 0.0
 Identities = 367/699 (52%), Positives = 448/699 (64%), Gaps = 13/699 (1%)
 Frame = +2

Query: 593  IQPVQNGQQQPAAGFSTAPGPVAP--TTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSW 766
            + PV    QQP+    TA  PV+     N   Q++SDWQEHT+ DGRRYYYN+KT+ SSW
Sbjct: 193  VTPVHQAGQQPSV---TADIPVSAGNVPNPTHQSSSDWQEHTSADGRRYYYNKKTRLSSW 249

Query: 767  EKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGV 946
            EKP ELMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+ELK+AREQAEK+  V
Sbjct: 250  EKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKS--V 307

Query: 947  VSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSIVTPKIASPATPVL 1126
                 SEM                        TASV  ++T  +T         P TPV+
Sbjct: 308  SQETQSEMGTTSNEPAVVAVSLAETPS-----TASVSVSSTTSSTISGMTSSPVPVTPVV 362

Query: 1127 -----PSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSALPN------STVE 1273
                 P  + S TS +P                  A +A TT+ V   P+      + V 
Sbjct: 363  AVVNPPPVVVSGTSAIP-----------------IAQSAVTTSAVGVQPSMGTPLPAAVS 405

Query: 1274 TNSSTMLNSDKDCVKEEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYAT 1453
             ++    N   D       +  + +D+EEAKK + V GK+NVTPL  EK  D+EPLVY+T
Sbjct: 406  GSTGVAANLSADAT-----NGASMQDIEEAKKGVAVAGKINVTPLE-EKTLDDEPLVYST 459

Query: 1454 KMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQE 1633
            K+EAKNAFK LLES +VESDWTWDQAM+ IINDKRYGALKTLGE+KQAFNEYL  RKK E
Sbjct: 460  KLEAKNAFKALLESANVESDWTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIE 519

Query: 1634 AEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXLFLSH 1813
            AEERR++QK+A+E+F  MLEECKELTS  +WSK   +F++D+RF AV        LF + 
Sbjct: 520  AEERRMRQKKAREEFTTMLEECKELTSSIKWSKAVDMFQDDERFKAVERSRDREDLFENF 579

Query: 1814 LXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLDNLDR 1993
            +                 N  EYR FLESCDFIKVNS WRKVQDR+ DDER SRL+ +DR
Sbjct: 580  IMELQKKERTKALEEQKRNRMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDR 639

Query: 1994 LEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHWHDYC 2173
            LE+F+EYIRDL             QLRR ERKNRDEFRKL+EEH   G LTAKTHW DYC
Sbjct: 640  LEIFQEYIRDLEREEEEQRKIQKEQLRRAERKNRDEFRKLMEEHVAAGTLTAKTHWRDYC 699

Query: 2174 QKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVASTWNL 2353
             KVK+   YLAV SNTSGS PK+LFED+ E+L+KQYH+DKARIKDAMK+ K+ +ASTW  
Sbjct: 700  MKVKDSSPYLAVASNTSGSTPKDLFEDVAEELEKQYHEDKARIKDAMKLSKVTIASTWTF 759

Query: 2354 EMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHSTKEI 2533
              FK +I +     ++S+ N+KLVF+E++                LAD+F DLL S KEI
Sbjct: 760  GDFKAAILDDVGSPNISDVNLKLVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRSKKEI 819

Query: 2534 TVSSHWEDCKLLLEDCKEYRAITEENFRREIFDEYISRM 2650
            T SS+WEDCK L E+ +EYR+I EE+F REIF+EYI+ +
Sbjct: 820  TASSNWEDCKPLFEESQEYRSIGEESFGREIFEEYIAHL 858


>gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Morus notabilis]
          Length = 994

 Score =  647 bits (1668), Expect = 0.0
 Identities = 356/726 (49%), Positives = 454/726 (62%), Gaps = 24/726 (3%)
 Frame = +2

Query: 545  TSYNASQQWAPPAQNNIQPVQNGQQ---QPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTA 715
            T+    Q W     ++  PV  GQQ    P+A  S       P+T    Q++SDWQEHT+
Sbjct: 135  TAPGPGQPWLSSGIHSAPPVAPGQQVGQPPSAASSADAATNVPSTTQ--QSSSDWQEHTS 192

Query: 716  HDGRRYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTI 895
             DGRRYYYN++TK+S W+KP ELMTP ERADASTVWKE+++ +GRKYYYNK+TK SKWTI
Sbjct: 193  SDGRRYYYNKRTKQSVWDKPVELMTPIERADASTVWKEYSSPDGRKYYYNKVTKQSKWTI 252

Query: 896  PDELKMAREQAEKAA-------------GVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXX 1036
            P+ELK+AREQA+K +             G V+ G+SEM                      
Sbjct: 253  PEELKLAREQAQKESSQGMQSETGLASHGPVAVGSSEMP---SAGTPVASGAPLVATGVA 309

Query: 1037 NLTASVMSTATVPNTSIVTPKIASPATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXX 1216
            +   +V   A++PN+S+      S ATP   S +AS  ++ P                  
Sbjct: 310  SSPVAVTPVASLPNSSMTIS--GSSATPGSQSAVASAVAVQP------------------ 349

Query: 1217 APAATTTTIVSALPNST-----VETNSSTMLNSDKDCVKEEKDSEINEK---DLEEAKKT 1372
             P  T T +  A+  ST     +   ++T + +  + V ++  S ++     D+EEAKK 
Sbjct: 350  -PMVTVTPLNPAISGSTGVSPALGNANTTPVRTYDNRVSQDIASSVDGASILDIEEAKKG 408

Query: 1373 MPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLESVHVESDWTWDQAMRVIIND 1552
            M V GK+NVTP+  EK  D+EPLV+A K EAKNAFK LLES +V+SDWTW+QAMR IIND
Sbjct: 409  MAVAGKINVTPVE-EKPVDDEPLVFANKQEAKNAFKSLLESANVQSDWTWEQAMREIIND 467

Query: 1553 KRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSK 1732
            KRYGALKTLGE+KQAFNEYL  RKK EAEERR++QK+A+E+F  MLEE KELTS  RWSK
Sbjct: 468  KRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTIMLEESKELTSSTRWSK 527

Query: 1733 VTPLFENDKRFLAVXXXXXXXXLFLSHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFI 1912
               +FEND+RF AV        LF S++                 N AEYR FLESCDFI
Sbjct: 528  AVSMFENDERFKAVERARDREDLFESYIVELERKEKEKAAEEHRRNAAEYRKFLESCDFI 587

Query: 1913 KVNSSWRKVQDRIADDERFSRLDNLDRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKN 2092
            KVNS WRKVQ R+ DDER  RL+ LDRL +F++YIRDL             QLRR ERKN
Sbjct: 588  KVNSQWRKVQVRLEDDERCLRLEKLDRLLIFQDYIRDLEKEEEEQKKIQKEQLRRVERKN 647

Query: 2093 RDEFRKLLEEHKEIGLLTAKTHWHDYCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLD 2272
            RDEFRKL+EEH +   LTAKT W DYC KVK+ P Y AV SNTSGS PK+LFED+ E+L+
Sbjct: 648  RDEFRKLMEEHIDAAALTAKTPWRDYCLKVKDLPQYEAVASNTSGSTPKDLFEDVTEELE 707

Query: 2273 KQYHDDKARIKDAMKMGKIVVASTWNLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXX 2452
            KQYHDDKAR+KD +K+GK+   S+W  + FK +I E      + E N+KLV++E++    
Sbjct: 708  KQYHDDKARVKDTLKLGKVSFESSWTFDDFKAAILEDIGSPPILEINLKLVYEELLERAK 767

Query: 2453 XXXXXXXXXXXXLADEFTDLLHSTKEITVSSHWEDCKLLLEDCKEYRAITEENFRREIFD 2632
                        LAD+FT LLHS KEIT +S+WEDC+ L E+C+EYRAI EE+  R+IF+
Sbjct: 768  EKEEKETKKRQRLADDFTKLLHSKKEITTTSNWEDCRQLFEECQEYRAIGEESVTRDIFE 827

Query: 2633 EYISRM 2650
            EYI+ +
Sbjct: 828  EYITHL 833


>ref|XP_006644254.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Oryza
            brachyantha]
          Length = 865

 Score =  646 bits (1667), Expect = 0.0
 Identities = 337/698 (48%), Positives = 448/698 (64%), Gaps = 5/698 (0%)
 Frame = +2

Query: 563  QQWAPPAQNNIQPVQNGQQ---QPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRY 733
            Q W P    N+ PV    Q   QP +  +T P     + NS+  ++SDWQEHT++DG++Y
Sbjct: 26   QPWGPAPGQNVPPVAPLVQPGHQPVSSSTTLP-----SINSSEPSSSDWQEHTSNDGKKY 80

Query: 734  YYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKM 913
            YYN+KT++SSWEKP ELMTP ERADAST WKEFTT EGRKYYYNK+TK SKWTIPDELKM
Sbjct: 81   YYNKKTRQSSWEKPAELMTPLERADASTEWKEFTTQEGRKYYYNKVTKQSKWTIPDELKM 140

Query: 914  AREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSIVT 1093
            ARE AEKA+       +E +                     + T S+++++T+       
Sbjct: 141  ARELAEKASNSRHDHETETTAGAPSGPTSNSVEPSSIPANQSSTMSIVASSTLDAAVNSV 200

Query: 1094 PKIASPATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSALPNSTVE 1273
            P  A  +  +  ++ +S T++                     P+   T ++S    S   
Sbjct: 201  PPGAGSSHNMENTSSSSNTAM-----------------QNGGPSTVITPVISTGIPSVAS 243

Query: 1274 TNSSTMLNSDKDCVKEEKDSE--INEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVY 1447
                +  N++        D +   +  DLEEAKKTMP+ GK+NVTP+  +K ++EEP++Y
Sbjct: 244  DAGISRANNEYSSKASTADMQNGASADDLEEAKKTMPLPGKINVTPVE-DKTSEEEPVIY 302

Query: 1448 ATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKK 1627
            A K+EAKNAFK LLES +VESDWTWDQAMRVIINDKRYGALKTLGE+KQAFNEYL  RKK
Sbjct: 303  ANKLEAKNAFKALLESSNVESDWTWDQAMRVIINDKRYGALKTLGERKQAFNEYLNQRKK 362

Query: 1628 QEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXLFL 1807
             EAEERR++Q++A++DFL MLEECKELTS  RWSK   +FE+DKRF AV        LF 
Sbjct: 363  LEAEERRVKQRKARDDFLAMLEECKELTSSTRWSKAITMFEDDKRFSAVERPREREDLFE 422

Query: 1808 SHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLDNL 1987
            ++L                 +IAEYRAFLESC+FIK N+ WRKVQDR+ DDER SRL+ +
Sbjct: 423  NYLMELQKKERARAAEEHKKHIAEYRAFLESCEFIKANTQWRKVQDRLEDDERCSRLEKI 482

Query: 1988 DRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHWHD 2167
            DRLE+F+EYIRDL             ++RR+ERKNRDEFRK+LEEH   G+L AKT W D
Sbjct: 483  DRLEIFQEYIRDLEKEEEEHKRIHKEKIRRQERKNRDEFRKMLEEHAAEGMLNAKTRWRD 542

Query: 2168 YCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVASTW 2347
            YC +VK+   Y+AV SNTSGS PKELFED++E+++KQY DDKARIK+A+K GKI + ++W
Sbjct: 543  YCAQVKDSHVYMAVASNTSGSMPKELFEDVMEEVEKQYQDDKARIKEAVKSGKIPMVASW 602

Query: 2348 NLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHSTK 2527
             LE F+ ++ E    K ++  N+KL++D+ +                L + F+DLL+S K
Sbjct: 603  TLEDFQTAVMEDDTFKGITNINMKLIYDDQVERLREKEVKEAKKRQRLGENFSDLLYSIK 662

Query: 2528 EITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDEYI 2641
            EI+ SS W+D K L ED +EY+A+  +++ RE+F+E +
Sbjct: 663  EISASSTWDDSKALFEDSQEYKALDSDSYARELFEECV 700



 Score = 61.6 bits (148), Expect = 2e-06
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +2

Query: 3020 HTSDRKKSRKHGYDSGSDSESRHKRHKRERDGSRRN 3127
            H+SDRKKSRKH + S SDSE+RHKRHK++RD SRRN
Sbjct: 812  HSSDRKKSRKHTHASDSDSENRHKRHKKDRDNSRRN 847


>ref|XP_006644253.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Oryza
            brachyantha]
          Length = 866

 Score =  646 bits (1667), Expect = 0.0
 Identities = 337/698 (48%), Positives = 448/698 (64%), Gaps = 5/698 (0%)
 Frame = +2

Query: 563  QQWAPPAQNNIQPVQNGQQ---QPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRY 733
            Q W P    N+ PV    Q   QP +  +T P     + NS+  ++SDWQEHT++DG++Y
Sbjct: 27   QPWGPAPGQNVPPVAPLVQPGHQPVSSSTTLP-----SINSSEPSSSDWQEHTSNDGKKY 81

Query: 734  YYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKM 913
            YYN+KT++SSWEKP ELMTP ERADAST WKEFTT EGRKYYYNK+TK SKWTIPDELKM
Sbjct: 82   YYNKKTRQSSWEKPAELMTPLERADASTEWKEFTTQEGRKYYYNKVTKQSKWTIPDELKM 141

Query: 914  AREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSIVT 1093
            ARE AEKA+       +E +                     + T S+++++T+       
Sbjct: 142  ARELAEKASNSRHDHETETTAGAPSGPTSNSVEPSSIPANQSSTMSIVASSTLDAAVNSV 201

Query: 1094 PKIASPATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSALPNSTVE 1273
            P  A  +  +  ++ +S T++                     P+   T ++S    S   
Sbjct: 202  PPGAGSSHNMENTSSSSNTAM-----------------QNGGPSTVITPVISTGIPSVAS 244

Query: 1274 TNSSTMLNSDKDCVKEEKDSE--INEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVY 1447
                +  N++        D +   +  DLEEAKKTMP+ GK+NVTP+  +K ++EEP++Y
Sbjct: 245  DAGISRANNEYSSKASTADMQNGASADDLEEAKKTMPLPGKINVTPVE-DKTSEEEPVIY 303

Query: 1448 ATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKK 1627
            A K+EAKNAFK LLES +VESDWTWDQAMRVIINDKRYGALKTLGE+KQAFNEYL  RKK
Sbjct: 304  ANKLEAKNAFKALLESSNVESDWTWDQAMRVIINDKRYGALKTLGERKQAFNEYLNQRKK 363

Query: 1628 QEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXLFL 1807
             EAEERR++Q++A++DFL MLEECKELTS  RWSK   +FE+DKRF AV        LF 
Sbjct: 364  LEAEERRVKQRKARDDFLAMLEECKELTSSTRWSKAITMFEDDKRFSAVERPREREDLFE 423

Query: 1808 SHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLDNL 1987
            ++L                 +IAEYRAFLESC+FIK N+ WRKVQDR+ DDER SRL+ +
Sbjct: 424  NYLMELQKKERARAAEEHKKHIAEYRAFLESCEFIKANTQWRKVQDRLEDDERCSRLEKI 483

Query: 1988 DRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHWHD 2167
            DRLE+F+EYIRDL             ++RR+ERKNRDEFRK+LEEH   G+L AKT W D
Sbjct: 484  DRLEIFQEYIRDLEKEEEEHKRIHKEKIRRQERKNRDEFRKMLEEHAAEGMLNAKTRWRD 543

Query: 2168 YCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVASTW 2347
            YC +VK+   Y+AV SNTSGS PKELFED++E+++KQY DDKARIK+A+K GKI + ++W
Sbjct: 544  YCAQVKDSHVYMAVASNTSGSMPKELFEDVMEEVEKQYQDDKARIKEAVKSGKIPMVASW 603

Query: 2348 NLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHSTK 2527
             LE F+ ++ E    K ++  N+KL++D+ +                L + F+DLL+S K
Sbjct: 604  TLEDFQTAVMEDDTFKGITNINMKLIYDDQVERLREKEVKEAKKRQRLGENFSDLLYSIK 663

Query: 2528 EITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDEYI 2641
            EI+ SS W+D K L ED +EY+A+  +++ RE+F+E +
Sbjct: 664  EISASSTWDDSKALFEDSQEYKALDSDSYARELFEECV 701



 Score = 61.6 bits (148), Expect = 2e-06
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +2

Query: 3020 HTSDRKKSRKHGYDSGSDSESRHKRHKRERDGSRRN 3127
            H+SDRKKSRKH + S SDSE+RHKRHK++RD SRRN
Sbjct: 813  HSSDRKKSRKHTHASDSDSENRHKRHKKDRDNSRRN 848


>gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
          Length = 1031

 Score =  646 bits (1666), Expect = 0.0
 Identities = 352/694 (50%), Positives = 443/694 (63%), Gaps = 12/694 (1%)
 Frame = +2

Query: 605  QNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFEL 784
            Q+GQQ  +  F+ +   V   T    Q++SDWQEHT+ DGRRYY+NR+TK+SSWEKP EL
Sbjct: 197  QSGQQPSSTTFTDSAVNVPSQTQ---QSSSDWQEHTSGDGRRYYFNRRTKQSSWEKPLEL 253

Query: 785  MTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSGNS 964
            MTP ERADASTVWKE+T+S+G+KYYYNK+T+ SKWTIP+ELK+AREQA++   +     S
Sbjct: 254  MTPMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKLAREQAQRE--LAQGTRS 311

Query: 965  EMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSIVTPKIASPATPVLP-SNIA 1141
            EM+                     +    + S++  P+TS   P + S    V+P S+ +
Sbjct: 312  EMNLTSHAPPAVA-----------SAETPMGSSSVGPSTSSALPGMVSSPVAVIPVSSFS 360

Query: 1142 SVTSIVP--NXXXXXXXXXXXXXXXXXAPAATTTTIVSALPNST---------VETNSST 1288
            + + I P  +                  P  T T   +++  ST         +  + ST
Sbjct: 361  NPSPIAPTGSSVASGAQSSITGGVGIQPPVVTVTPPPASVSGSTGVPPTLVNAITKSVST 420

Query: 1289 MLNSDKDCVKEEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAK 1468
              N     +    D    + D+EEAK+ M V GKVNVTP S EK  DEEPLVYA+K EAK
Sbjct: 421  FENVTSQDIGSADDGAFTQ-DIEEAKRGMAVAGKVNVTP-SEEKTVDEEPLVYASKQEAK 478

Query: 1469 NAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERR 1648
            NAFK LLES +V SDWTW+Q MR IINDKRYGALKTLGE+KQAFNEYL  RKK E EERR
Sbjct: 479  NAFKALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLENEERR 538

Query: 1649 IQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXLFLSHLXXXX 1828
            ++QK+A+E+F +MLEE KEL S  RWSK   +FEND+RF AV        L+ S++    
Sbjct: 539  MRQKKAREEFSKMLEESKELMSATRWSKAVSMFENDERFKAVERARDREDLYESYIVELE 598

Query: 1829 XXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLDNLDRLEVFE 2008
                         NIAEYR FLESCDFIKVNS WRKVQDR+ DDER  RL+ LDRL +F+
Sbjct: 599  RKEKEKAAEDHKQNIAEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRLLIFQ 658

Query: 2009 EYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHWHDYCQKVKE 2188
            +YIRDL             QLRR ERKNRDEFRKL+EEH   G LTAKT+W DYC KVK+
Sbjct: 659  DYIRDLEKEEEEQKKIQKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTYWRDYCMKVKD 718

Query: 2189 HPAYLAVTSNTSGSRPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVASTWNLEMFKD 2368
              +Y AV SNTSGS PKELFED+ E+L+KQYH+DKARIKDAMK+GK+ +AST   E FK 
Sbjct: 719  LSSYEAVASNTSGSTPKELFEDVAEELEKQYHEDKARIKDAMKLGKVTLASTLTFEEFKV 778

Query: 2369 SISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHSTKEITVSSH 2548
            +I E     S+S+ N KLV++E++                L D+F  LLH+ KEIT SS+
Sbjct: 779  AILEDIGFPSISDINFKLVYEELLERAKEKEEKEAKKRQRLGDDFNKLLHTFKEITASSN 838

Query: 2549 WEDCKLLLEDCKEYRAITEENFRREIFDEYISRM 2650
            WEDCK L E+ +EYR+I EENF RE+F+EYI+ +
Sbjct: 839  WEDCKHLFEETQEYRSIGEENFSREVFEEYITNL 872


>gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
            gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
          Length = 1032

 Score =  645 bits (1665), Expect = 0.0
 Identities = 357/714 (50%), Positives = 446/714 (62%), Gaps = 18/714 (2%)
 Frame = +2

Query: 557  ASQQWAPPAQNNIQ---PVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGR 727
            A Q W      ++    P+Q   QQP    S      AP     P + SDWQEHT+ DGR
Sbjct: 178  AGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPI--HTPPSASDWQEHTSADGR 235

Query: 728  RYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDEL 907
            RYYYN+KT++SSWEKP ELMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+EL
Sbjct: 236  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEEL 295

Query: 908  KMAREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSI 1087
            K+AREQA+  A   +  ++ ++                        A  +S+A +P  +I
Sbjct: 296  KLAREQAQVVASQGAPSDTGVASQAP-------------------VAGAVSSAEMPAAAI 336

Query: 1088 -VTPKIASPATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXA-----PAATTTTIV- 1246
             V+   +  ++PV  + +A+V +  P                  A     PA   T +  
Sbjct: 337  PVSSNTSQASSPVSVTPVAAVANPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPA 396

Query: 1247 -----SALPNSTVETNSSTMLNSDKDCVKEEKDSEIN---EKDLEEAKKTMPVTGKVNVT 1402
                 S  P ++V  N+ TM+ S +    ++     N    +D+EEAKK M   GKVNVT
Sbjct: 397  VSSGGSTTPVTSVNANT-TMIRSLESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVT 455

Query: 1403 PLSVEKAADEEPLVYATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLG 1582
            P+  EK  D+EPLVYA K EAKNAFK LLES +V+SDWTW+Q MR IINDKRYGALKTLG
Sbjct: 456  PVE-EKVPDDEPLVYANKQEAKNAFKSLLESANVQSDWTWEQTMREIINDKRYGALKTLG 514

Query: 1583 EKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKR 1762
            E+KQAFNEYL  RKK EAEERR++QK+A+E+F +MLEE KELTS  RWSK   LFEND+R
Sbjct: 515  ERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSMRWSKAQSLFENDER 574

Query: 1763 FLAVXXXXXXXXLFLSHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSWRKVQ 1942
            F AV        LF +++                 NIAEYR FLESCDFIK NS WRKVQ
Sbjct: 575  FKAVERARDREDLFENYIVELERKERENAAEEKRRNIAEYRKFLESCDFIKANSQWRKVQ 634

Query: 1943 DRIADDERFSRLDNLDRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRKLLEE 2122
            DR+ DDER SRL+ +DRL +F++YI DL             QLRR ERKNRD FRKL++E
Sbjct: 635  DRLEDDERCSRLEKIDRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDE 694

Query: 2123 HKEIGLLTAKTHWHDYCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDKQYHDDKARI 2302
            H   G LTAKT+W DYC KVK+ P YLAV SNTSGS PK+LFED++E+L+KQY  DK  I
Sbjct: 695  HVVDGTLTAKTYWRDYCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHI 754

Query: 2303 KDAMKMGKIVVASTWNLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXXXXXX 2482
            KDAMK GKI + STW +E FK +ISE      +S+ N+KLV++E++              
Sbjct: 755  KDAMKSGKISMVSTWTVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKR 814

Query: 2483 XXLADEFTDLLHSTKEITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDEYIS 2644
              LAD+FT LLH+ KEIT SS WED + L E+ +EYR+I EE+ RREIF+EYI+
Sbjct: 815  QRLADDFTKLLHTYKEITASSDWEDSRPLFEESQEYRSIAEESLRREIFEEYIA 868


>gb|EEE54732.1| hypothetical protein OsJ_02081 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  644 bits (1662), Expect = 0.0
 Identities = 341/700 (48%), Positives = 448/700 (64%), Gaps = 2/700 (0%)
 Frame = +2

Query: 548  SYNASQQWAPPAQNNIQPVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGR 727
            SY A Q W      N+  VQ G Q P +  +T P     + NS+  ++SDWQEHT+ DG+
Sbjct: 156  SYTAMQSWGTAPGQNVPLVQPGHQ-PMSSSATMP-----SINSSETSSSDWQEHTSADGK 209

Query: 728  RYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDEL 907
            +YYYN+KT++SSWEKP ELMTP ERADAST WKEFTT EGRKYYYNK+TK SKWTIPDEL
Sbjct: 210  KYYYNKKTRQSSWEKPAELMTPLERADASTEWKEFTTQEGRKYYYNKVTKQSKWTIPDEL 269

Query: 908  KMAREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSI 1087
            K+ARE AEKA+       +E +                       T++ +  ++VP    
Sbjct: 270  KIARELAEKASNPRPDQETETT----------------AGAPSGPTSNSVEPSSVPANQS 313

Query: 1088 VTPKIASPATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSALPNST 1267
             T  + +P+T    +N +      P+                  P+   T ++S    S 
Sbjct: 314  STTIMGAPSTLDAAAN-SVPPGAGPSHNMENTSSSSNTAMQNGGPSTVVTPVISTEIPSV 372

Query: 1268 VETNSSTMLNSDKDCVKEEKDSE--INEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPL 1441
                  +  N++   +    D++   + ++LEEAKKTM V GK+NVTP+  +K ++EEP+
Sbjct: 373  ASDAGISRANNEYPSLASTADTQNGASAEELEEAKKTMAVPGKINVTPVE-DKTSEEEPV 431

Query: 1442 VYATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHR 1621
             YA K+EAKNAFK LLES +VESDWTWDQAMRVIINDKRYGALKTLGE+KQAFNEYL  R
Sbjct: 432  TYANKLEAKNAFKALLESSNVESDWTWDQAMRVIINDKRYGALKTLGERKQAFNEYLNQR 491

Query: 1622 KKQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXL 1801
            KK EAEERRI+Q++A++DFL MLEE KELTS  RWSK   +FE+D+RF AV        L
Sbjct: 492  KKLEAEERRIKQRKARDDFLAMLEESKELTSSTRWSKAITMFEDDERFSAVERPREREDL 551

Query: 1802 FLSHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLD 1981
            F S+L                 +IAEYRAFLESC+FIK ++ WRKVQ+R+ DDER SRL+
Sbjct: 552  FESYLMELQKKERARAAEEHKRHIAEYRAFLESCEFIKTSTQWRKVQERLEDDERCSRLE 611

Query: 1982 NLDRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHW 2161
             +DRLE+F+EYIRDL             Q+RR+ERKNRDEFRK+LEEH   G+LTAKT W
Sbjct: 612  KIDRLEIFQEYIRDLEKEEEEHKRIHKEQVRRQERKNRDEFRKMLEEHVAEGMLTAKTRW 671

Query: 2162 HDYCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVAS 2341
             DYC +VK+   YLAV SN SGS PK+LFED++E+L+KQY DDKARIK+A+K GKI + +
Sbjct: 672  RDYCAQVKDSSVYLAVASNISGSMPKDLFEDVMEELEKQYQDDKARIKEAVKSGKIPMTT 731

Query: 2342 TWNLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHS 2521
            +W LE F+ +++E   LK ++  N+KL+FD+ +                L + F+DLL+S
Sbjct: 732  SWTLEDFETAVTEDDTLKGITNINMKLIFDDQVERLREKEVKEAKKRQRLGENFSDLLYS 791

Query: 2522 TKEITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDEYI 2641
             KEI+ SS W+D K L ED +EY+A+  E + RE+F+E +
Sbjct: 792  IKEISASSTWDDSKALFEDSQEYKALDSETYSRELFEECV 831



 Score = 61.6 bits (148), Expect = 2e-06
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +2

Query: 3020 HTSDRKKSRKHGYDSGSDSESRHKRHKRERDGSRRN 3127
            H+SDRKKSRKH + S SDSE+RHKRHK++RD SRRN
Sbjct: 949  HSSDRKKSRKHTHASDSDSENRHKRHKKDRDSSRRN 984


>gb|EOY15665.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
          Length = 904

 Score =  639 bits (1649), Expect = e-180
 Identities = 358/723 (49%), Positives = 447/723 (61%), Gaps = 27/723 (3%)
 Frame = +2

Query: 557  ASQQWAPPAQNNIQ---PVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGR 727
            A Q W      ++    P+Q   QQP    S      AP     P + SDWQEHT+ DGR
Sbjct: 178  AGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPI--HTPPSASDWQEHTSADGR 235

Query: 728  RYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDEL 907
            RYYYN+KT++SSWEKP ELMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+EL
Sbjct: 236  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEEL 295

Query: 908  KMAREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSI 1087
            K+AREQA+  A   +  ++ ++                        A  +S+A +P  +I
Sbjct: 296  KLAREQAQVVASQGAPSDTGVASQAP-------------------VAGAVSSAEMPAAAI 336

Query: 1088 -VTPKIASPATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXA-----PAATTTTIV- 1246
             V+   +  ++PV  + +A+V +  P                  A     PA   T +  
Sbjct: 337  PVSSNTSQASSPVSVTPVAAVANPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPA 396

Query: 1247 -----SALPNSTVETNSSTMLNSDKDCVKEEKDSEIN---EKDLEEAKKTMPVTGKVNVT 1402
                 S  P ++V  N+ TM+ S +    ++     N    +D+EEAKK M   GKVNVT
Sbjct: 397  VSSGGSTTPVTSVNANT-TMIRSLESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVT 455

Query: 1403 PLSVEKAADEEPLVYATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLG 1582
            P+  EK  D+EPLVYA K EAKNAFK LLES +V+SDWTW+Q MR IINDKRYGALKTLG
Sbjct: 456  PVE-EKVPDDEPLVYANKQEAKNAFKSLLESANVQSDWTWEQTMREIINDKRYGALKTLG 514

Query: 1583 EKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKR 1762
            E+KQAFNEYL  RKK EAEERR++QK+A+E+F +MLEE KELTS  RWSK   LFEND+R
Sbjct: 515  ERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSMRWSKAQSLFENDER 574

Query: 1763 FLAVXXXXXXXXLFLSHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKV-------- 1918
            F AV        LF +++                 NIAEYR FLESCDFIKV        
Sbjct: 575  FKAVERARDREDLFENYIVELERKERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQ 634

Query: 1919 -NSSWRKVQDRIADDERFSRLDNLDRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNR 2095
             NS WRKVQDR+ DDER SRL+ +DRL +F++YI DL             QLRR ERKNR
Sbjct: 635  ANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNR 694

Query: 2096 DEFRKLLEEHKEIGLLTAKTHWHDYCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDK 2275
            D FRKL++EH   G LTAKT+W DYC KVK+ P YLAV SNTSGS PK+LFED++E+L+K
Sbjct: 695  DAFRKLMDEHVVDGTLTAKTYWRDYCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEK 754

Query: 2276 QYHDDKARIKDAMKMGKIVVASTWNLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXX 2455
            QY  DK  IKDAMK GKI + STW +E FK +ISE      +S+ N+KLV++E++     
Sbjct: 755  QYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKE 814

Query: 2456 XXXXXXXXXXXLADEFTDLLHSTKEITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDE 2635
                       LAD+FT LLH+ KEIT SS WED + L E+ +EYR+I EE+ RREIF+E
Sbjct: 815  KEEKEAKKRQRLADDFTKLLHTYKEITASSDWEDSRPLFEESQEYRSIAEESLRREIFEE 874

Query: 2636 YIS 2644
            YI+
Sbjct: 875  YIA 877


>gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
          Length = 1041

 Score =  639 bits (1649), Expect = e-180
 Identities = 358/723 (49%), Positives = 447/723 (61%), Gaps = 27/723 (3%)
 Frame = +2

Query: 557  ASQQWAPPAQNNIQ---PVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGR 727
            A Q W      ++    P+Q   QQP    S      AP     P + SDWQEHT+ DGR
Sbjct: 178  AGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPI--HTPPSASDWQEHTSADGR 235

Query: 728  RYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDEL 907
            RYYYN+KT++SSWEKP ELMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+EL
Sbjct: 236  RYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEEL 295

Query: 908  KMAREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSI 1087
            K+AREQA+  A   +  ++ ++                        A  +S+A +P  +I
Sbjct: 296  KLAREQAQVVASQGAPSDTGVASQAP-------------------VAGAVSSAEMPAAAI 336

Query: 1088 -VTPKIASPATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXA-----PAATTTTIV- 1246
             V+   +  ++PV  + +A+V +  P                  A     PA   T +  
Sbjct: 337  PVSSNTSQASSPVSVTPVAAVANPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPA 396

Query: 1247 -----SALPNSTVETNSSTMLNSDKDCVKEEKDSEIN---EKDLEEAKKTMPVTGKVNVT 1402
                 S  P ++V  N+ TM+ S +    ++     N    +D+EEAKK M   GKVNVT
Sbjct: 397  VSSGGSTTPVTSVNANT-TMIRSLESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVT 455

Query: 1403 PLSVEKAADEEPLVYATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLG 1582
            P+  EK  D+EPLVYA K EAKNAFK LLES +V+SDWTW+Q MR IINDKRYGALKTLG
Sbjct: 456  PVE-EKVPDDEPLVYANKQEAKNAFKSLLESANVQSDWTWEQTMREIINDKRYGALKTLG 514

Query: 1583 EKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKR 1762
            E+KQAFNEYL  RKK EAEERR++QK+A+E+F +MLEE KELTS  RWSK   LFEND+R
Sbjct: 515  ERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSMRWSKAQSLFENDER 574

Query: 1763 FLAVXXXXXXXXLFLSHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKV-------- 1918
            F AV        LF +++                 NIAEYR FLESCDFIKV        
Sbjct: 575  FKAVERARDREDLFENYIVELERKERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQ 634

Query: 1919 -NSSWRKVQDRIADDERFSRLDNLDRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNR 2095
             NS WRKVQDR+ DDER SRL+ +DRL +F++YI DL             QLRR ERKNR
Sbjct: 635  ANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNR 694

Query: 2096 DEFRKLLEEHKEIGLLTAKTHWHDYCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDK 2275
            D FRKL++EH   G LTAKT+W DYC KVK+ P YLAV SNTSGS PK+LFED++E+L+K
Sbjct: 695  DAFRKLMDEHVVDGTLTAKTYWRDYCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEK 754

Query: 2276 QYHDDKARIKDAMKMGKIVVASTWNLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXX 2455
            QY  DK  IKDAMK GKI + STW +E FK +ISE      +S+ N+KLV++E++     
Sbjct: 755  QYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKE 814

Query: 2456 XXXXXXXXXXXLADEFTDLLHSTKEITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDE 2635
                       LAD+FT LLH+ KEIT SS WED + L E+ +EYR+I EE+ RREIF+E
Sbjct: 815  KEEKEAKKRQRLADDFTKLLHTYKEITASSDWEDSRPLFEESQEYRSIAEESLRREIFEE 874

Query: 2636 YIS 2644
            YI+
Sbjct: 875  YIA 877


>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
            gi|550323102|gb|EEE98334.2| FF domain-containing family
            protein [Populus trichocarpa]
          Length = 1019

 Score =  639 bits (1647), Expect = e-180
 Identities = 341/696 (48%), Positives = 446/696 (64%), Gaps = 10/696 (1%)
 Frame = +2

Query: 593  IQPVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEK 772
            + PVQ    QP+   S++   VA ++NS  Q+ SDWQEHTA DGRRYYYNR+TK+SSW+K
Sbjct: 168  VPPVQPAVVQPSIS-SSSDSTVAVSSNSQ-QSLSDWQEHTASDGRRYYYNRRTKQSSWDK 225

Query: 773  PFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVS 952
            PFELMTP ERADASTVWKEFTT EG+KYYYNK+TK SKW+IP+ELKMAREQA++  G  +
Sbjct: 226  PFELMTPIERADASTVWKEFTTQEGKKYYYNKVTKQSKWSIPEELKMAREQAQQTVGQGN 285

Query: 953  SGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVM----STATVPNTSIVTPK----IAS 1108
               ++ +                     + ++SVM    S++ +  T++  P       S
Sbjct: 286  QSETDAASNVPTAVAVTSSETSTTAVSVS-SSSVMLPGVSSSPISVTAVANPPPVVVSGS 344

Query: 1109 PATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSALPNSTVETNSST 1288
            PA PV  S  AS   + P+                  P  T  ++ +  P + V+  +++
Sbjct: 345  PALPVAHSTTASAVGVQPSV----------------TPLPTAVSVGTGAPAAAVDAKTTS 388

Query: 1289 MLNSDKDCVKEEKDSE--INEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKME 1462
            + + D    +   +S    +  D  E  K     GK N +PL  EK  DEEPLV+A K+E
Sbjct: 389  LSSIDNLLSQSAANSVDGASMMDTAEFNKVSMDMGKTNASPLE-EKTPDEEPLVFANKLE 447

Query: 1463 AKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEE 1642
            AKNAFK LLES +V+SDWTW+Q MR IINDKRY ALKTLGE+KQAFNEYL  RKK EAEE
Sbjct: 448  AKNAFKALLESANVQSDWTWEQTMREIINDKRYAALKTLGERKQAFNEYLGQRKKLEAEE 507

Query: 1643 RRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXLFLSHLXX 1822
            RR++QK+A+E+F +MLEE KELTS  +WSK   LFEND+R+ A+        LF S++  
Sbjct: 508  RRVRQKKAREEFAKMLEESKELTSSMKWSKAISLFENDERYKALERARDREDLFDSYIVD 567

Query: 1823 XXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLDNLDRLEV 2002
                           N+AEYR FLESCDFIK +S WRK+QDR+ DDER   L+ LDRL +
Sbjct: 568  LERKEKEKAAEDRRRNVAEYRKFLESCDFIKASSQWRKIQDRLEDDERCLCLEKLDRLLI 627

Query: 2003 FEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHWHDYCQKV 2182
            F++YIRDL             QLRR ERKNRDEFRKLLEEH   G LTAKTHW DYC KV
Sbjct: 628  FQDYIRDLEKEEEEQKKIQKEQLRRAERKNRDEFRKLLEEHVASGSLTAKTHWLDYCLKV 687

Query: 2183 KEHPAYLAVTSNTSGSRPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVASTWNLEMF 2362
            K+ P Y AV +NTSGS+PK+LFED+ E+L+KQYHDDK RIKDAMK+GKI + STW  E F
Sbjct: 688  KDLPPYQAVATNTSGSKPKDLFEDVSEELEKQYHDDKTRIKDAMKLGKITMVSTWTFEDF 747

Query: 2363 KDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHSTKEITVS 2542
            K ++++      +S+ N+KL+++E++                LAD+FT LL++ KE+T S
Sbjct: 748  KGAVADDIGSPPISDINLKLLYEELVERAKEKEEKEAKKQQRLADDFTKLLYTLKEVTPS 807

Query: 2543 SHWEDCKLLLEDCKEYRAITEENFRREIFDEYISRM 2650
            S+WEDCK L E+ +EYR+I EE+  +EIF+EY++ +
Sbjct: 808  SNWEDCKPLFEESQEYRSIGEESLSKEIFEEYVTHL 843


>ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Solanum
            tuberosum]
          Length = 864

 Score =  636 bits (1640), Expect = e-179
 Identities = 345/678 (50%), Positives = 435/678 (64%), Gaps = 4/678 (0%)
 Frame = +2

Query: 623  PAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFELMTPTER 802
            P++   +A  P  P + ++ Q  SDWQE+ A DGRRYYYN+ TK+SSWEKP ELMTP ER
Sbjct: 173  PSSHQLSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSWEKPLELMTPLER 232

Query: 803  ADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVV----SSGNSEM 970
            ADASTVWKEFTT++GRKYYYNK TK SKWTIPDELK+ARE AE AAG V    +S NS +
Sbjct: 233  ADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSGV 292

Query: 971  SFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSIVTPKIASPATPVLPSNIASVT 1150
                                  + T S ++++ VP    VTP ++   TP L   + S +
Sbjct: 293  QVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVP----VTPAVSDVNTPPL---VVSGS 345

Query: 1151 SIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSALPNSTVETNSSTMLNSDKDCVKEEKD 1330
            S +P+                 +PA + +T  +AL N+  +T  S + N           
Sbjct: 346  SAIPSVSLAVTSSAGVS-----SPAVSGSTESAALANA-YQTQMSGIENLSPQVASSL-- 397

Query: 1331 SEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLESVHVES 1510
            S  + +D+EEAKK M V GK+NV P   EK+ADEEP +YATK EAKNAFK LLES +VES
Sbjct: 398  SGASSQDIEEAKKGMAVAGKINVVPAE-EKSADEEPFLYATKQEAKNAFKALLESANVES 456

Query: 1511 DWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRML 1690
            DWTW+Q MRVIINDKRYGALKTLGE+KQAFNEYL  RKKQEAEERR++Q++AKE+F +ML
Sbjct: 457  DWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKML 516

Query: 1691 EECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXLFLSHLXXXXXXXXXXXXXXXXXN 1870
            EE KELTS  RWSK   +FE+D+RF AV        LF ++L                 N
Sbjct: 517  EESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQEEYRRN 576

Query: 1871 IAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLDNLDRLEVFEEYIRDLXXXXXXXX 2050
              EY+ FLE+C FIKV++ WRKVQD + DDER SRL+ LDRLE+F+EYIRDL        
Sbjct: 577  RLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEKEDEEQR 636

Query: 2051 XXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHWHDYCQKVKEHPAYLAVTSNTSGS 2230
                 QLRR ERKNRD FRK++EEH   G+LTAKT W DYCQ VKE  AY AV SNTSGS
Sbjct: 637  KLQKEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAVASNTSGS 696

Query: 2231 RPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVASTWNLEMFKDSISEVSDLKSLSEA 2410
             PK+LFED+ E+L+KQYH+DK R+KD +K  KI ++STW  E FK +I E     S+ + 
Sbjct: 697  TPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGSPSIHDV 756

Query: 2411 NIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHSTKEITVSSHWEDCKLLLEDCKEY 2590
            N++L+F++++                LA +FTD L S KEIT SS WE+ K L+ED  E+
Sbjct: 757  NLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEF 816

Query: 2591 RAITEENFRREIFDEYIS 2644
            RAI EE   R +F+EY++
Sbjct: 817  RAIGEETISRAVFEEYVA 834


>ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
            tuberosum]
          Length = 872

 Score =  636 bits (1640), Expect = e-179
 Identities = 345/678 (50%), Positives = 435/678 (64%), Gaps = 4/678 (0%)
 Frame = +2

Query: 623  PAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFELMTPTER 802
            P++   +A  P  P + ++ Q  SDWQE+ A DGRRYYYN+ TK+SSWEKP ELMTP ER
Sbjct: 173  PSSHQLSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSWEKPLELMTPLER 232

Query: 803  ADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVV----SSGNSEM 970
            ADASTVWKEFTT++GRKYYYNK TK SKWTIPDELK+ARE AE AAG V    +S NS +
Sbjct: 233  ADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSGV 292

Query: 971  SFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSIVTPKIASPATPVLPSNIASVT 1150
                                  + T S ++++ VP    VTP ++   TP L   + S +
Sbjct: 293  QVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVP----VTPAVSDVNTPPL---VVSGS 345

Query: 1151 SIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSALPNSTVETNSSTMLNSDKDCVKEEKD 1330
            S +P+                 +PA + +T  +AL N+  +T  S + N           
Sbjct: 346  SAIPSVSLAVTSSAGVS-----SPAVSGSTESAALANA-YQTQMSGIENLSPQVASSL-- 397

Query: 1331 SEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLESVHVES 1510
            S  + +D+EEAKK M V GK+NV P   EK+ADEEP +YATK EAKNAFK LLES +VES
Sbjct: 398  SGASSQDIEEAKKGMAVAGKINVVPAE-EKSADEEPFLYATKQEAKNAFKALLESANVES 456

Query: 1511 DWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRML 1690
            DWTW+Q MRVIINDKRYGALKTLGE+KQAFNEYL  RKKQEAEERR++Q++AKE+F +ML
Sbjct: 457  DWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKML 516

Query: 1691 EECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXLFLSHLXXXXXXXXXXXXXXXXXN 1870
            EE KELTS  RWSK   +FE+D+RF AV        LF ++L                 N
Sbjct: 517  EESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQEEYRRN 576

Query: 1871 IAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLDNLDRLEVFEEYIRDLXXXXXXXX 2050
              EY+ FLE+C FIKV++ WRKVQD + DDER SRL+ LDRLE+F+EYIRDL        
Sbjct: 577  RLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEKEDEEQR 636

Query: 2051 XXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHWHDYCQKVKEHPAYLAVTSNTSGS 2230
                 QLRR ERKNRD FRK++EEH   G+LTAKT W DYCQ VKE  AY AV SNTSGS
Sbjct: 637  KLQKEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAVASNTSGS 696

Query: 2231 RPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVASTWNLEMFKDSISEVSDLKSLSEA 2410
             PK+LFED+ E+L+KQYH+DK R+KD +K  KI ++STW  E FK +I E     S+ + 
Sbjct: 697  TPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGSPSIHDV 756

Query: 2411 NIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHSTKEITVSSHWEDCKLLLEDCKEY 2590
            N++L+F++++                LA +FTD L S KEIT SS WE+ K L+ED  E+
Sbjct: 757  NLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEF 816

Query: 2591 RAITEENFRREIFDEYIS 2644
            RAI EE   R +F+EY++
Sbjct: 817  RAIGEETISRAVFEEYVA 834


>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
            tuberosum]
          Length = 1031

 Score =  636 bits (1640), Expect = e-179
 Identities = 345/678 (50%), Positives = 435/678 (64%), Gaps = 4/678 (0%)
 Frame = +2

Query: 623  PAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFELMTPTER 802
            P++   +A  P  P + ++ Q  SDWQE+ A DGRRYYYN+ TK+SSWEKP ELMTP ER
Sbjct: 173  PSSHQLSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSWEKPLELMTPLER 232

Query: 803  ADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVV----SSGNSEM 970
            ADASTVWKEFTT++GRKYYYNK TK SKWTIPDELK+ARE AE AAG V    +S NS +
Sbjct: 233  ADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSGV 292

Query: 971  SFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSIVTPKIASPATPVLPSNIASVT 1150
                                  + T S ++++ VP    VTP ++   TP L   + S +
Sbjct: 293  QVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVP----VTPAVSDVNTPPL---VVSGS 345

Query: 1151 SIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSALPNSTVETNSSTMLNSDKDCVKEEKD 1330
            S +P+                 +PA + +T  +AL N+  +T  S + N           
Sbjct: 346  SAIPSVSLAVTSSAGVS-----SPAVSGSTESAALANA-YQTQMSGIENLSPQVASSL-- 397

Query: 1331 SEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLESVHVES 1510
            S  + +D+EEAKK M V GK+NV P   EK+ADEEP +YATK EAKNAFK LLES +VES
Sbjct: 398  SGASSQDIEEAKKGMAVAGKINVVPAE-EKSADEEPFLYATKQEAKNAFKALLESANVES 456

Query: 1511 DWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRML 1690
            DWTW+Q MRVIINDKRYGALKTLGE+KQAFNEYL  RKKQEAEERR++Q++AKE+F +ML
Sbjct: 457  DWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKML 516

Query: 1691 EECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXLFLSHLXXXXXXXXXXXXXXXXXN 1870
            EE KELTS  RWSK   +FE+D+RF AV        LF ++L                 N
Sbjct: 517  EESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQEEYRRN 576

Query: 1871 IAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLDNLDRLEVFEEYIRDLXXXXXXXX 2050
              EY+ FLE+C FIKV++ WRKVQD + DDER SRL+ LDRLE+F+EYIRDL        
Sbjct: 577  RLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEKEDEEQR 636

Query: 2051 XXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHWHDYCQKVKEHPAYLAVTSNTSGS 2230
                 QLRR ERKNRD FRK++EEH   G+LTAKT W DYCQ VKE  AY AV SNTSGS
Sbjct: 637  KLQKEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAVASNTSGS 696

Query: 2231 RPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVASTWNLEMFKDSISEVSDLKSLSEA 2410
             PK+LFED+ E+L+KQYH+DK R+KD +K  KI ++STW  E FK +I E     S+ + 
Sbjct: 697  TPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGSPSIHDV 756

Query: 2411 NIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHSTKEITVSSHWEDCKLLLEDCKEY 2590
            N++L+F++++                LA +FTD L S KEIT SS WE+ K L+ED  E+
Sbjct: 757  NLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEF 816

Query: 2591 RAITEENFRREIFDEYIS 2644
            RAI EE   R +F+EY++
Sbjct: 817  RAIGEETISRAVFEEYVA 834



 Score = 61.6 bits (148), Expect = 2e-06
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +2

Query: 3020 HTSDRKKSRKHGYDSGSDSESRHKRHKRERDGSRRN 3127
            H+SDRKKS+KH +   SD ESRHKRH+R+RDGSRRN
Sbjct: 979  HSSDRKKSKKHAHSPESDGESRHKRHRRDRDGSRRN 1014


>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 985

 Score =  627 bits (1617), Expect = e-176
 Identities = 345/721 (47%), Positives = 454/721 (62%), Gaps = 20/721 (2%)
 Frame = +2

Query: 548  SYNASQQWAPPAQ---NNIQPVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAH 718
            S   SQ W   A    N + P+    Q  +   +  P   AP  N   Q +SDWQEH + 
Sbjct: 135  SVGNSQPWLSSASQTTNLVSPIDQANQHSSVS-AVNPAANAPVFNQ--QLSSDWQEHASA 191

Query: 719  DGRRYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIP 898
            DGRRYYYN+KTK+SSWEKP ELMTP ERADASTVWKEFT  +GRKYYYNK+TK SKWT+P
Sbjct: 192  DGRRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTAPDGRKYYYNKVTKESKWTMP 251

Query: 899  DELKMAREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPN 1078
            +ELK+AREQA+K A       +++S                     ++ +S+  T +   
Sbjct: 252  EELKLAREQAQKEA--TQGTQTDISVMAPQPTLAAGLSHAETPAISSVNSSISPTVSGVA 309

Query: 1079 TS--IVTPKIASPATP-VLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVS 1249
            TS   VTP ++   +P V+ +  +++T                       P A+TT++  
Sbjct: 310  TSPVPVTPFVSVSNSPSVMVTGSSAITG---------------------TPIASTTSVSG 348

Query: 1250 AL------------PNSTVETNSSTMLNSDKDCVKEEKDS--EINEKDLEEAKKTMPVTG 1387
             +            P + V  N+S++   +    ++ K++    + +D+EEA+K M V G
Sbjct: 349  TVSSQSVAASGGTGPPAVVHANASSVTPFESLASQDVKNTVDGTSTEDIEEARKGMAVAG 408

Query: 1388 KVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGA 1567
            KVN T L  EK+AD+EPLV+A K EAKNAFK LLESV+V+SDWTW+QAMR IINDKRYGA
Sbjct: 409  KVNETVLE-EKSADDEPLVFANKQEAKNAFKALLESVNVQSDWTWEQAMREIINDKRYGA 467

Query: 1568 LKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLF 1747
            LKTLGE+KQAF+EYL HRKK +AEERRI+QK+A+E+F +MLEE KELTS  RWSK   +F
Sbjct: 468  LKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFTKMLEESKELTSSTRWSKAVSMF 527

Query: 1748 ENDKRFLAVXXXXXXXXLFLSHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSS 1927
            END+RF AV        LF S++                 NIAEYR FLESCD+IKV+S 
Sbjct: 528  ENDERFKAVERSRDREDLFESYIVELERKEKERAAEEHKKNIAEYRKFLESCDYIKVSSQ 587

Query: 1928 WRKVQDRIADDERFSRLDNLDRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFR 2107
            WRKVQDR+ DDER SRL+ LDRL +F++YIRDL             ++RR ERKNRDEFR
Sbjct: 588  WRKVQDRLEDDERCSRLEKLDRLLIFQDYIRDLEKEEEDQKKIQKERVRRIERKNRDEFR 647

Query: 2108 KLLEEHKEIGLLTAKTHWHDYCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDKQYHD 2287
            KL+EEH   G+ TAKT W DYC KVKE P Y AV SNTSGS PK+LFED+LEDL+ +YH+
Sbjct: 648  KLMEEHIAAGVFTAKTFWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVLEDLENKYHE 707

Query: 2288 DKARIKDAMKMGKIVVASTWNLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXX 2467
            +K +IKD +K  KI + S+W  + FK +I E   L ++S+ N KLV+++++         
Sbjct: 708  EKTQIKDVVKAAKITITSSWTFDDFKAAIEESGSL-AVSDINFKLVYEDLLERAKEKEEK 766

Query: 2468 XXXXXXXLADEFTDLLHSTKEITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDEYISR 2647
                   LAD+F+ LL S KEIT SS+WED K L E+ +EYR+I EE+F +E+F+E+I+ 
Sbjct: 767  EAKRRQRLADDFSGLLQSLKEITTSSNWEDSKQLFEESEEYRSIGEESFAKEVFEEHITH 826

Query: 2648 M 2650
            +
Sbjct: 827  L 827


>ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-like [Fragaria vesca
            subsp. vesca]
          Length = 990

 Score =  626 bits (1614), Expect = e-176
 Identities = 341/703 (48%), Positives = 436/703 (62%), Gaps = 5/703 (0%)
 Frame = +2

Query: 557  ASQQWAPPAQNN---IQPVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGR 727
            A Q W   + +    + P Q   QQP +  +  P P     N A  ++SDWQEH A DGR
Sbjct: 138  AGQPWMSSSSHQGAAVTPQQQPSQQPTS--TPFPDPAVNAPNLAQPSSSDWQEHMASDGR 195

Query: 728  RYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDEL 907
            RYY+NR T++SSWEKP ELMTP ERADASTVWKE+T+++G+KYYYNK+T+ SKWTIP+EL
Sbjct: 196  RYYFNRSTRQSSWEKPLELMTPLERADASTVWKEYTSADGKKYYYNKVTRESKWTIPEEL 255

Query: 908  KMAREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSI 1087
            K+AREQA++         SEM+                       + S     TV +   
Sbjct: 256  KLAREQAQREH--TQGTQSEMTSTSHAPPATASAEIHAGASSVGPSTSSAQPGTVSSPVA 313

Query: 1088 VTPKIA-SPATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSALPNS 1264
            VTP  A S  +P  PS ++    +  +                  PA+   +  + LP++
Sbjct: 314  VTPISAFSNPSPTTPSGLSVAPGVQSSMATGSVGVQPAVVNVSPLPASNVGS--TGLPST 371

Query: 1265 TVETNSSTMLNSDKDCVKEEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLV 1444
             V T + ++  +             + +D+EEAKK M V GKVNVTP S EKA D+EPLV
Sbjct: 372  LVNTITKSVNENQAPQDSASSIDGASSQDIEEAKKGMAVAGKVNVTP-SEEKAIDDEPLV 430

Query: 1445 YATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRK 1624
            YA+K EAKNAFK LLES +V SDWTW+QAMR IINDKRYGAL+TLGE+KQAFNEYL  RK
Sbjct: 431  YASKQEAKNAFKSLLESANVHSDWTWEQAMREIINDKRYGALRTLGERKQAFNEYLGQRK 490

Query: 1625 KQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXLF 1804
            K E EERRI+QKRA+E+F +MLEE KELTS  RWSK   +FEND+RF AV        L+
Sbjct: 491  KLENEERRIRQKRAREEFTKMLEESKELTSTIRWSKAVTMFENDERFKAVERARDREDLY 550

Query: 1805 LSHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLDN 1984
             S++                 NI+EY+ FLESCDFIK    WRKVQDR+ DDER  RLD 
Sbjct: 551  ESYIVELERKEKEIAAEEHRRNISEYKEFLESCDFIK----WRKVQDRLEDDERCLRLDK 606

Query: 1985 LDRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHWH 2164
             DRL +F+++IRDL             QLRR ERKNRDEFRK+LEEH   G LTAKT W 
Sbjct: 607  FDRLLIFQDHIRDLEKEEEEQKKIQKEQLRRIERKNRDEFRKILEEHAADGTLTAKTQWR 666

Query: 2165 DYCQKVKEHPAYLAVTSNTSG-SRPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVAS 2341
            DYC KVK+ P Y AV +NT G S PK+LFED+ EDL+KQ+ +DKAR+KDAMK G+I + S
Sbjct: 667  DYCMKVKDLPQYEAVAANTHGSSTPKDLFEDVAEDLEKQFVEDKARVKDAMKQGQITMVS 726

Query: 2342 TWNLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHS 2521
            +W  E FK ++       S+SE N+KL +++I+                +AD+F  LLH+
Sbjct: 727  SWTFEEFKAAVVNDIGFPSISELNLKLAYEDILERAREKEEKEAKKRLRIADDFHKLLHT 786

Query: 2522 TKEITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDEYISRM 2650
             KEITVSS WEDCK L E+ +EYR++ +E+F REIF+EYI+ +
Sbjct: 787  FKEITVSSSWEDCKQLFEETQEYRSVGDEDFGREIFEEYITSL 829


>ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-like [Glycine max]
          Length = 997

 Score =  622 bits (1604), Expect = e-175
 Identities = 341/699 (48%), Positives = 443/699 (63%), Gaps = 3/699 (0%)
 Frame = +2

Query: 557  ASQQWAPPAQNNIQPVQNGQQQPA---AGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGR 727
            + Q W   A  +   V +   QPA   +  +T+   V   TN   Q+ SDWQEHT+ DGR
Sbjct: 147  SGQPWPSSASQSAVAVTS--VQPAGVQSSGATSTDAVINATNQ--QSLSDWQEHTSADGR 202

Query: 728  RYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDEL 907
            RYYYN++T++SSWEKP ELM+P ERADASTVWKEFT+SEGRKYYYNK+T+ S W+IP+EL
Sbjct: 203  RYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSEGRKYYYNKVTQQSTWSIPEEL 262

Query: 908  KMAREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTSI 1087
            K+AREQA+ AA       SE S                     +L  S+ S     + S 
Sbjct: 263  KLAREQAQNAAN--QGMQSETSDTCNAVVSSTETPTPTAANAASLNTSLTSNGLASSPSS 320

Query: 1088 VTPKIASPATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAATTTTIVSALPNST 1267
            VTP IA+  +  L S ++  TS+  +                 + A T     S L  ++
Sbjct: 321  VTP-IAATDSQRLVSGLSG-TSVSHSMATPSTTGVEPSTVVTTSAAPTIVAGSSGLAENS 378

Query: 1268 VETNSSTMLNSDKDCVKEEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVY 1447
             +      +  ++        +  + +D+EEAK+ +PV GK NVTP   EK  D+E LVY
Sbjct: 379  PQQPKMPPVVENQASQDFASANGSSLQDIEEAKRPLPVVGKNNVTPPE-EKTNDDETLVY 437

Query: 1448 ATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKK 1627
            A K+EAKNAFK LLESV V+SDWTW+QAMR IINDKRY ALKTLGE+KQAFNEYL  RKK
Sbjct: 438  ANKLEAKNAFKALLESVSVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKK 497

Query: 1628 QEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLAVXXXXXXXXLFL 1807
             EAEERR++QKRA+E+F +MLEECKELTS  RWSK   +FEND+RF AV        LF 
Sbjct: 498  LEAEERRMKQKRAREEFTKMLEECKELTSSMRWSKAISMFENDERFNAVERPRDREDLFE 557

Query: 1808 SHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSWRKVQDRIADDERFSRLDNL 1987
            S++                 NIAEYR FLESCD++KVNS WRK+QDR+ DD+R+ RL+ +
Sbjct: 558  SYMVELERKEKENAAEEHRQNIAEYRKFLESCDYVKVNSPWRKIQDRLEDDDRYLRLEKI 617

Query: 1988 DRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRKLLEEHKEIGLLTAKTHWHD 2167
            DRL VF++YIRDL             ++RR ERKNRD FRKLL EH   G+LTAKT W +
Sbjct: 618  DRLLVFQDYIRDLEKEEEEQKRIQKDRIRRGERKNRDAFRKLLGEHVSAGILTAKTQWRE 677

Query: 2168 YCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDKQYHDDKARIKDAMKMGKIVVASTW 2347
            YC KV++ P Y AV SNTSGS PK+LFED+ EDL+KQYH+DK  IKD +K GKI V +T 
Sbjct: 678  YCLKVRDLPQYQAVASNTSGSTPKDLFEDVAEDLEKQYHEDKTLIKDTVKSGKITVVTTS 737

Query: 2348 NLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXXXXXXXXLADEFTDLLHSTK 2527
              E FK ++ E +  +++SE N+KL+F+E++                LAD+FT+LL++ K
Sbjct: 738  VFEEFKVAVLEGAACQTISEINLKLIFEELLERAKEKEEKEAKKRQRLADDFTNLLYTFK 797

Query: 2528 EITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDEYIS 2644
            +IT SS WEDCK L E+ +EYR+I +E++ REIF+EYI+
Sbjct: 798  DITTSSKWEDCKSLFEETQEYRSIGDESYSREIFEEYIT 836


>ref|XP_003549369.2| PREDICTED: pre-mRNA-processing protein 40A-like [Glycine max]
          Length = 1008

 Score =  621 bits (1602), Expect = e-175
 Identities = 344/717 (47%), Positives = 447/717 (62%), Gaps = 21/717 (2%)
 Frame = +2

Query: 557  ASQQWAPPAQNNIQPVQNGQQQPAAGFSTAPGPVAPTTNSAP--QNTSDWQEHTAHDGRR 730
            A Q W   A  ++  V + Q   +AG  ++      T  +A   Q+ SDWQEHT+ DGRR
Sbjct: 152  AGQSWPSSASQSVAAVTSVQ---SAGVQSSGAASTDTVTNATNQQSLSDWQEHTSADGRR 208

Query: 731  YYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELK 910
            YYYN++T++SSWEKP ELM+P ERADASTVWKEFT SEGRKYYYNK+T+ S W+IP+ELK
Sbjct: 209  YYYNKRTRQSSWEKPLELMSPIERADASTVWKEFT-SEGRKYYYNKVTQQSTWSIPEELK 267

Query: 911  MAREQAEKAA--GVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTATVPNTS 1084
            +AREQA+KAA  G+ S  N   +                     + TA+   T T  N +
Sbjct: 268  LAREQAQKAANQGMQSETNDTSN------------------AAVSSTATPTPTPTAVNAA 309

Query: 1085 IVTPKIASPATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAATTT-----TIVS 1249
             +   + S  +  L S+ +SVT I                        +TT     T+V+
Sbjct: 310  SLNTSLTSNHSNGLASSPSSVTPIAATDSQQSVSGLSGSSVSHSIVTPSTTGVEPSTVVT 369

Query: 1250 ALPNSTVETNSSTMLNSDKDCVK---------EEKDSEINE---KDLEEAKKTMPVTGKV 1393
                 T+   SS +  +     K          +  + +N    +D+EEAK+++PV GK 
Sbjct: 370  TSAAPTIVAGSSGLAENSPQQSKMPPLVENQASQDFASVNGSSLQDIEEAKRSLPVVGKN 429

Query: 1394 NVTPLSVEKAADEEPLVYATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALK 1573
            NV P   EK  D+E LVYA K+EAK AFK LLESV+V+SDWTW+QAMR IINDKRY ALK
Sbjct: 430  NVVPPE-EKTNDDETLVYANKLEAKLAFKALLESVNVQSDWTWEQAMREIINDKRYNALK 488

Query: 1574 TLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFEN 1753
            TLGE+KQAFNEYL  RKK EAEERR++QKRA+E+F +MLEECKELTS  RWSK   +FEN
Sbjct: 489  TLGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLEECKELTSSMRWSKAISMFEN 548

Query: 1754 DKRFLAVXXXXXXXXLFLSHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSWR 1933
            D+RF AV        LF S++                 NIAEYR FLESCD++K NS WR
Sbjct: 549  DERFNAVERLRDREDLFESYMVELERKEKENAAEEHRRNIAEYRKFLESCDYVKANSHWR 608

Query: 1934 KVQDRIADDERFSRLDNLDRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRKL 2113
            K+QDR+ DD+R+ RL+ +D L VF++YIRDL             Q+RR ERKNRD FRKL
Sbjct: 609  KIQDRLEDDDRYLRLEKIDCLLVFQDYIRDLEKEEEEQKRIQKDQIRRGERKNRDAFRKL 668

Query: 2114 LEEHKEIGLLTAKTHWHDYCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDKQYHDDK 2293
            LEEH   G+LTAKT WH+YC KV++ P Y AV SNTSGS PK+LFED  EDL+KQYH+DK
Sbjct: 669  LEEHVAAGILTAKTQWHEYCLKVRDLPQYQAVASNTSGSTPKDLFEDAAEDLEKQYHEDK 728

Query: 2294 ARIKDAMKMGKIVVASTWNLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXXX 2473
              IKD +K GKI V +T   E FK ++ E +  +++SE N+KL+F+E++           
Sbjct: 729  TLIKDTIKSGKITVVTTSVFEEFKVAVLEEAACQTISEINLKLIFEELLERAKEKEEKEA 788

Query: 2474 XXXXXLADEFTDLLHSTKEITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDEYIS 2644
                 LAD+FT+LL++ K+IT SS WEDCK L E+ +EYR+I +E++ REIF+EYI+
Sbjct: 789  KKRQRLADDFTNLLYTFKDITASSKWEDCKSLFEEAQEYRSIGDESYSREIFEEYIT 845


>ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cicer arietinum]
          Length = 1000

 Score =  617 bits (1590), Expect = e-173
 Identities = 342/718 (47%), Positives = 445/718 (61%), Gaps = 24/718 (3%)
 Frame = +2

Query: 563  QQWAPPAQNNIQPVQNGQQQPAAGFSTAP----------GPVAPTTNSAPQNTSDWQEHT 712
            Q  APPA    QP  +   Q AA  ++ P             A T  +   + SDWQEH+
Sbjct: 145  QMLAPPAG---QPWPSSVSQSAAAVTSVPPAGVQSSGTASTDAATNTTNHNSASDWQEHS 201

Query: 713  AHDGRRYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWT 892
            + DGRRYYYN++T++SSWEKP ELM+P ERADASTVWKEFT+S+GRKYYYNK+T+ S WT
Sbjct: 202  SADGRRYYYNKRTRQSSWEKPLELMSPLERADASTVWKEFTSSDGRKYYYNKVTQQSTWT 261

Query: 893  IPDELKMAREQAEKAAGVVSSGN-SEMSFXXXXXXXXXXXXXXXXXXXXNLTASVMSTAT 1069
            IP+ELK+ARE A K    +S G  SE S                     N   S  +T T
Sbjct: 262  IPEELKLAREHAHKT---ISQGTVSETS------------------DTSNAAGSFAATPT 300

Query: 1070 VPN-------TSIVTPKIASPATPVLPSNIASVTSIVPNXXXXXXXXXXXXXXXXXAPAA 1228
              N       TS       S  TP+  ++   + S +                   +P  
Sbjct: 301  AANADSFNALTSNGLASSPSSITPIAATDHQQLFSGLSGTSVSHSVVTSSATGVEPSPVV 360

Query: 1229 TTTTIVSALPNST-VETNS--STMLNSDKDCVKEEKDSEINE---KDLEEAKKTMPVTGK 1390
            T +T  + +  S+ V  NS  S + +  ++   ++  + +N    +DLEEAK+ +PV GK
Sbjct: 361  TVSTAPTTVAGSSGVAANSLDSKIPSIVENLATQDSTTSVNGAPLQDLEEAKRGLPVVGK 420

Query: 1391 VNVTPLSVEKAADEEPLVYATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGAL 1570
             NVTP S EK  D E LVYA K+EAKNAFK LLESV V+SDWTW+QAMR I+NDKRY AL
Sbjct: 421  TNVTP-SEEKTNDGETLVYANKLEAKNAFKALLESVSVQSDWTWEQAMREIVNDKRYNAL 479

Query: 1571 KTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFE 1750
            KTLGE+KQAFNEYL  RKK EAEERRI+QK+A+E+F +MLEECKELTS  RWSK   + E
Sbjct: 480  KTLGERKQAFNEYLGQRKKLEAEERRIKQKKAREEFTKMLEECKELTSSTRWSKAISMLE 539

Query: 1751 NDKRFLAVXXXXXXXXLFLSHLXXXXXXXXXXXXXXXXXNIAEYRAFLESCDFIKVNSSW 1930
            +D+RF AV        LF S++                 N+AEYR FL+SCD++KVNS W
Sbjct: 540  SDERFSAVERPRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLQSCDYVKVNSHW 599

Query: 1931 RKVQDRIADDERFSRLDNLDRLEVFEEYIRDLXXXXXXXXXXXXXQLRRKERKNRDEFRK 2110
            RK+QDR+ DD+R+ +L+ +DRL VF++YIRDL             +LRR ERKNRD FRK
Sbjct: 600  RKIQDRLEDDDRYLQLEKIDRLLVFQDYIRDLEKEEEEQKKIQKERLRRGERKNRDAFRK 659

Query: 2111 LLEEHKEIGLLTAKTHWHDYCQKVKEHPAYLAVTSNTSGSRPKELFEDILEDLDKQYHDD 2290
            LLEEH   G+LTAKT W DYC KVKE P Y AV SNTSGS PK+LFED+ EDL+KQYH+D
Sbjct: 660  LLEEHVADGVLTAKTQWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVFEDLEKQYHED 719

Query: 2291 KARIKDAMKMGKIVVASTWNLEMFKDSISEVSDLKSLSEANIKLVFDEIMXXXXXXXXXX 2470
            K+ IKD +K GKI V +T   E FK  + E +  + +SE N+KL+++E++          
Sbjct: 720  KSLIKDTLKSGKITVVTTSVFEDFKSVVLEEAACQKISEINLKLLYEELLERAKEKEEKE 779

Query: 2471 XXXXXXLADEFTDLLHSTKEITVSSHWEDCKLLLEDCKEYRAITEENFRREIFDEYIS 2644
                  LAD+FT++L++ K+IT +S WEDCK L E+ +EYR+I +E++ REIF+EYI+
Sbjct: 780  AKKRQRLADDFTNVLYTLKDITTTSEWEDCKPLFEETQEYRSIGDESYSREIFEEYIT 837