BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00002114
         (3201 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19931.1| viral replicase [Nandina mosaic virus]                 848   0.0  
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...   840   0.0  
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...   839   0.0  
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...   837   0.0  
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...   836   0.0  
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...   836   0.0  
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...   836   0.0  
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...   835   0.0  
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...   833   0.0  
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a...   831   0.0  
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...   735   0.0  
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]             615   e-173
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5...   612   e-172
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo...   580   e-162
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A...   562   e-157
gb|AFM77886.1| replicase [Hosta virus X]                              556   e-155
ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CA...   556   e-155
ref|NP_077079.1| replicase [Clover yellow mosaic virus]               548   e-153
gb|AAF67818.1|AF111193_1 replicase [Potato virus X]                   544   e-151
gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X]          544   e-151

>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  848 bits (2192), Expect = 0.0
 Identities = 415/453 (91%), Positives = 427/453 (94%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLSLVREDKIEEFS                 VE+ TT LDDF+E L DKFDR
Sbjct: 888  EATPYLKTFLSLVREDKIEEFSAPPDPPKSVMPPVTHFPVEECTTALDDFREELHDKFDR 947

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIFTEAHGHTNCVQ DDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL
Sbjct: 948  EIFTEAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 1007

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW NYHKAM LPKEQP+FSE+LWTRCAEEVQNTYLKKS+NQ+KGGERRQSPDFHEHQ
Sbjct: 1008 GDILWTNYHKAMNLPKEQPDFSEELWTRCAEEVQNTYLKKSLNQLKGGERRQSPDFHEHQ 1067

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN
Sbjct: 1068 ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 1127

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CEKTPQDLSRWVL+YWDFSKP+YANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL
Sbjct: 1128 CEKTPQDLSRWVLSYWDFSKPAYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 1187

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF IPEGTAQIYAGDDCAIAQV
Sbjct: 1188 DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFNIPEGTAQIYAGDDCAIAQV 1247

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEKPSFALLK+RIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ
Sbjct: 1248 CPEKPSFALLKDRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1307

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            KKAGVKDAI+NV+ANYSLDAKLAYSLGD+L DL
Sbjct: 1308 KKAGVKDAITNVVANYSLDAKLAYSLGDELHDL 1340


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  840 bits (2169), Expect = 0.0
 Identities = 410/453 (90%), Positives = 422/453 (93%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKFDR
Sbjct: 900  EATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDR 959

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDL
Sbjct: 960  EIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDL 1019

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQ
Sbjct: 1020 GDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQ 1079

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMIN
Sbjct: 1080 ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMIN 1139

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL
Sbjct: 1140 CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 1199

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQV
Sbjct: 1200 DIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQV 1259

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ
Sbjct: 1260 CPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1319

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            KKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1320 KKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  839 bits (2167), Expect = 0.0
 Identities = 411/453 (90%), Positives = 421/453 (92%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKFDR
Sbjct: 900  EATPYLKTFLSLVREDKIEEFTATTAEAKPVAPPCTHFPVEDGTTTLDDFKEELHDKFDR 959

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIF   HGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLTIS PEAN+ EFRAKKDL
Sbjct: 960  EIFNPTHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTISNPEANLAEFRAKKDL 1019

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+ QIKGGERRQSPDFHEHQ
Sbjct: 1020 GDILWENYRKAMKLPNEQPDFSEDLWIRCAEEVQNTYLKKSVAQIKGGERRQSPDFHEHQ 1079

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR+ALSPNNIMIN
Sbjct: 1080 ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFREALSPNNIMIN 1139

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL
Sbjct: 1140 CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 1199

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQV
Sbjct: 1200 DIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQV 1259

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ
Sbjct: 1260 CPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1319

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            KKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1320 KKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  837 bits (2161), Expect = 0.0
 Identities = 408/453 (90%), Positives = 421/453 (92%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKFDR
Sbjct: 900  EATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDR 959

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDL
Sbjct: 960  EIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDL 1019

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEH 
Sbjct: 1020 GDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHH 1079

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMIN
Sbjct: 1080 ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMIN 1139

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CE+TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL
Sbjct: 1140 CERTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 1199

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQV
Sbjct: 1200 DIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQV 1259

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ
Sbjct: 1260 CPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1319

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            KKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1320 KKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  836 bits (2160), Expect = 0.0
 Identities = 409/453 (90%), Positives = 421/453 (92%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKFDR
Sbjct: 900  EATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDR 959

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDL
Sbjct: 960  EIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDL 1019

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQ
Sbjct: 1020 GDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQ 1079

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMIN
Sbjct: 1080 ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMIN 1139

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL
Sbjct: 1140 CEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 1199

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQV
Sbjct: 1200 DIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQV 1259

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ
Sbjct: 1260 CPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1319

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            KKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1320 KKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  836 bits (2160), Expect = 0.0
 Identities = 409/453 (90%), Positives = 421/453 (92%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKFDR
Sbjct: 900  EATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDR 959

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDL
Sbjct: 960  EIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDL 1019

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQ
Sbjct: 1020 GDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQ 1079

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMIN
Sbjct: 1080 ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMIN 1139

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL
Sbjct: 1140 CEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 1199

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQV
Sbjct: 1200 DIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQV 1259

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ
Sbjct: 1260 CPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1319

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            KKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1320 KKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  836 bits (2160), Expect = 0.0
 Identities = 409/453 (90%), Positives = 421/453 (92%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKFDR
Sbjct: 900  EATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDR 959

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDL
Sbjct: 960  EIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDL 1019

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQ
Sbjct: 1020 GDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQ 1079

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMIN
Sbjct: 1080 ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMIN 1139

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL
Sbjct: 1140 CEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 1199

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQV
Sbjct: 1200 DIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQV 1259

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ
Sbjct: 1260 CPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1319

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            KKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1320 KKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  835 bits (2158), Expect = 0.0
 Identities = 408/453 (90%), Positives = 420/453 (92%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKFDR
Sbjct: 900  EATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDR 959

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKKDL
Sbjct: 960  EIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDL 1019

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQ
Sbjct: 1020 GDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQ 1079

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMIN
Sbjct: 1080 ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMIN 1139

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL
Sbjct: 1140 CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 1199

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKLSPKIF+GTL+IMRLTGEGP FDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQV
Sbjct: 1200 DIKLSPKIFMGTLTIMRLTGEGPAFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQV 1259

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ
Sbjct: 1260 CPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1319

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            KKAGVKDAI+NV+ NYSLDAKLAYSLGDDLQDL
Sbjct: 1320 KKAGVKDAITNVVDNYSLDAKLAYSLGDDLQDL 1352


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
            gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
            replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
            [Plantago asiatica mosaic virus]
          Length = 1385

 Score =  833 bits (2152), Expect = 0.0
 Identities = 408/453 (90%), Positives = 420/453 (92%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLSLVREDKI EF                  VE+  TTLDDFKE L DKFDR
Sbjct: 905  EATPYLKTFLSLVREDKITEFQAPADAPKPVTPPVTHFPVEEPATTLDDFKEELRDKFDR 964

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIFT   GHTNCVQ DDPTTQLFSHQQAKDEALLWE I+ARL ISTPEANIEEFRAKKDL
Sbjct: 965  EIFTSDRGHTNCVQTDDPTTQLFSHQQAKDEALLWEMIRARLKISTPEANIEEFRAKKDL 1024

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW NYH+AM LPKEQP+FSEDLW RCAEEVQNTYLKK++ Q+KGGERRQSPDFHEHQ
Sbjct: 1025 GDILWVNYHRAMGLPKEQPDFSEDLWNRCAEEVQNTYLKKTMAQLKGGERRQSPDFHEHQ 1084

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGAK+IKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN
Sbjct: 1085 ILIFLKSQWVKKMEKLGAKEIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 1144

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL
Sbjct: 1145 CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 1204

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQV
Sbjct: 1205 DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQV 1264

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ
Sbjct: 1265 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1324

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            KKAGV+DAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1325 KKAGVRDAITNVVANYSLDAKLAYSLGDDLQDL 1357


>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
            virus]
          Length = 711

 Score =  831 bits (2147), Expect = 0.0
 Identities = 404/453 (89%), Positives = 422/453 (93%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLSLVRED++ EFS                 VED TTTLDDF+E L DKFDR
Sbjct: 231  EATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDR 290

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEAN+ EFRAKKDL
Sbjct: 291  EIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDL 350

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQSPDFHEHQ
Sbjct: 351  GDILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQ 410

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMIN
Sbjct: 411  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMIN 470

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL
Sbjct: 471  CEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 530

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QV
Sbjct: 531  DIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQV 590

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ
Sbjct: 591  CPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 650

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            KKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 651  KKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 683


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
            gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
            [Tulip virus X]
          Length = 1361

 Score =  735 bits (1898), Expect = 0.0
 Identities = 359/453 (79%), Positives = 393/453 (86%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLSLVRE K+EEF+                 VE+ + TL   ++SL+DK+DR
Sbjct: 881  EATPYLKTFLSLVREHKLEEFTAVEDPPQEVAPPVTHFPVENASHTLGLIQDSLADKYDR 940

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EI    HG TNCVQ +D T QLFSHQQAKDEALLWETI ARL +STPEAN+ EF AKKDL
Sbjct: 941  EILNTNHGFTNCVQTEDLTVQLFSHQQAKDEALLWETIDARLRLSTPEANLAEFHAKKDL 1000

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GD+LW NYH+AMKLPKEQP+FS +LW RCA EVQ TYL KS+ QIKGGERRQSPDF E++
Sbjct: 1001 GDVLWENYHRAMKLPKEQPDFSPELWERCAAEVQQTYLSKSLQQIKGGERRQSPDFPENK 1060

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR+RDAL PNNIMIN
Sbjct: 1061 ILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVMLYGTMARYMRRYRDALGPNNIMIN 1120

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CE+TP DLSRWV N+WDF+KP YANDFTAFDQSQDGAMLQFEILKAK+FNLPEWVIEGYL
Sbjct: 1121 CERTPADLSRWVRNHWDFTKPXYANDFTAFDQSQDGAMLQFEILKAKFFNLPEWVIEGYL 1180

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKL+P+IF GTL+IMRLTGEGPTFDANTECNIAYTHTRF IP+  AQ+YAGDDCAIA+V
Sbjct: 1181 DIKLTPQIFTGTLAIMRLTGEGPTFDANTECNIAYTHTRFHIPDHVAQLYAGDDCAIAEV 1240

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            C EKPSFALLKNRIALQAKPAY PQ RG WAEFCGYLITPKGLIKDPLKLH+SLELAKA 
Sbjct: 1241 CQEKPSFALLKNRIALQAKPAYAPQTRGAWAEFCGYLITPKGLIKDPLKLHSSLELAKAL 1300

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            +K G KDAI+NV+ANYSLDAK+AYSLGDDLQDL
Sbjct: 1301 RKQGRKDAITNVVANYSLDAKMAYSLGDDLQDL 1333


>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  615 bits (1586), Expect = e-173
 Identities = 308/453 (67%), Positives = 347/453 (76%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLK FLS VRE+ I                     VE+ +  L  + E + +KF+R
Sbjct: 907  EATPYLKAFLSTVREEAIAAHQLPNADPRPDPEPKTHFPVENTSCALGAYMEKVPEKFER 966

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIFTE  GHTNCVQ  +P  QLF HQQAKDEALLWETIKARLTIS+PEAN EEF  KKD+
Sbjct: 967  EIFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARLTISSPEANWEEFYRKKDI 1026

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW +Y KAM LP+E   FSEDLW   A EVQNTYL K +N +K GERRQSPDF +HQ
Sbjct: 1027 GDILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQ 1086

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            IL+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+ L PN+I IN
Sbjct: 1087 ILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREVLGPNHIKIN 1146

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CE TP+DLSR++ NYWDF   SYANDFTAFDQSQDGAMLQFEILKAK+FN+PE +I+GYL
Sbjct: 1147 CEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDGAMLQFEILKAKHFNIPEEIIQGYL 1206

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP GTAQ+YAGDD AIA V
Sbjct: 1207 DIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPPGTAQLYAGDDSAIACV 1266

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
             PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLIKDP KL ASL+L +A 
Sbjct: 1267 PPERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLIKDPAKLFASLKLLQA- 1325

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
              +G K  +     NY  D  LAY+L D L ++
Sbjct: 1326 -TSGSKKELVEAAGNYERDVGLAYALKDSLYEI 1357


>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
            viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  612 bits (1577), Expect = e-172
 Identities = 307/453 (67%), Positives = 346/453 (76%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLK FLS VRE+ I                     VE+ +  L  + E + +KF+R
Sbjct: 907  EATPYLKAFLSTVREEAIAAHQLPSADPRPDPEPKTHFPVENTSCALGAYMEKVPEKFER 966

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIFTE  GHTNCVQ  +P  QLF HQQAKDEALLWETIKARLTIS+PEAN EEF  KKD+
Sbjct: 967  EIFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARLTISSPEANWEEFYKKKDI 1026

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW +Y KAM LP+E   FSEDLW   A EVQNTYL K +N +K GERRQSPDF +HQ
Sbjct: 1027 GDILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQ 1086

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            IL+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+AL PN+I IN
Sbjct: 1087 ILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREALGPNHIKIN 1146

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CE TP+DLSR++ NYWDF   SYANDFTAFDQSQD AMLQFEILKAK+FN+P  +I+GYL
Sbjct: 1147 CEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDAAMLQFEILKAKHFNIPGEIIQGYL 1206

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP GTAQ+YAGDD AIA V
Sbjct: 1207 DIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPPGTAQLYAGDDSAIACV 1266

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
             PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLIKDP KL ASL+L +A 
Sbjct: 1267 PPERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLIKDPAKLFASLKLLQA- 1325

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
              +G K  +     NY  D  LAY+L D L ++
Sbjct: 1326 -TSGSKKELVEAAGNYERDVGLAYALKDSLYEI 1357


>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
            gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
            RNA polymerase [Cassava common mosaic virus]
            gi|1587823|prf||2207297A ORF 1
          Length = 1449

 Score =  580 bits (1496), Expect = e-162
 Identities = 300/458 (65%), Positives = 339/458 (74%), Gaps = 5/458 (1%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFLS+VREDKI E+                  VE+  T L++F E L+ K +R
Sbjct: 975  EATPYLKTFLSMVREDKILEWRPKEPEPAKEEPPKTHFPVENGNTILEEFTEELAQKHER 1034

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EIF E+HGHTNCVQ D+   Q  SHQQAKDEALLWETIKARL IS  + N  EF  KKD+
Sbjct: 1035 EIFNESHGHTNCVQTDNKIIQTLSHQQAKDEALLWETIKARLVISHKQHNWTEFVKKKDI 1094

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GDILW NY +AM LP++   F E+LW   A E+Q+TYL KS   +K GERRQSPDF E  
Sbjct: 1095 GDILWLNYKRAMHLPEDPIPF-EELWELAAREIQHTYLSKSTQMLKNGERRQSPDFGEKD 1153

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR RD   P +IMIN
Sbjct: 1154 ILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRIRDIYMPEHIMIN 1213

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CE+TP DLS W LNYW+F KPSYANDFTAFDQSQDGAMLQFEILKAK+ N+PEWV+EGYL
Sbjct: 1214 CERTPTDLSYWALNYWNFDKPSYANDFTAFDQSQDGAMLQFEILKAKHHNIPEWVLEGYL 1273

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIKL  +IFLGTLSIMRLTGE  TFDANTECNIAYTHTRF+IPEG AQ     D A+   
Sbjct: 1274 DIKLDSRIFLGTLSIMRLTGEYQTFDANTECNIAYTHTRFDIPEGVAQ-----DSAMDAT 1328

Query: 1081 CPEKPSFALLKNRIALQ-----AKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 1245
            C EKPSF L+++ ++L+      KP    Q  G+WAEFCGYLITPKGLIKDPLKL AS  
Sbjct: 1329 CLEKPSFKLIESELSLKLYAGDCKPCLKAQIPGEWAEFCGYLITPKGLIKDPLKLAASFR 1388

Query: 1246 LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            LAK + K      + N + NY+ D KLAY LGDDL +L
Sbjct: 1389 LAKERGKR----ELDNCLENYARDMKLAYDLGDDLLEL 1422


>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
            [Allium virus X]
          Length = 1701

 Score =  562 bits (1448), Expect = e-157
 Identities = 278/452 (61%), Positives = 336/452 (74%)
 Frame = +1

Query: 4    ATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDRE 183
            ATPYLKTFL   RE++++E                   VE++   L++  E L +K DRE
Sbjct: 1229 ATPYLKTFLDFTREERLKESQPREQEPTEPEGPTTHFPVENEKFVLEEQVEELLEKHDRE 1288

Query: 184  IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLG 363
            I    HGHTNCVQ +D   QLFSHQQAKD+ALLW TI+ARL IS P+ANI EF AKK++G
Sbjct: 1289 ILRPDHGHTNCVQTEDAVIQLFSHQQAKDQALLWATIEARLKISNPKANIAEFNAKKEIG 1348

Query: 364  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQI 543
            D+L+ +YH+AMKLP +   F EDLW  CA+EVQ TYL K IN +K GE RQSPDF ++ I
Sbjct: 1349 DVLFEHYHQAMKLPDKPIPFMEDLWVACAQEVQGTYLSKPINMLKNGEYRQSPDFDKNTI 1408

Query: 544  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 723
             +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR R+A  P  IMINC
Sbjct: 1409 ALFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRMREAFQPPEIMINC 1468

Query: 724  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 903
            EK PQ LS W+ NYW F+  +YANDFT FDQSQDGAMLQFEILKAK+ ++PEWV+EGYLD
Sbjct: 1469 EKDPQTLSHWIQNYWKFNSYAYANDFTQFDQSQDGAMLQFEILKAKHHSIPEWVLEGYLD 1528

Query: 904  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 1083
            IK + K+F G LSIMRLTGEGPTFDANTECNIAYTH RF++P+GTAQ+YAGDD A++ + 
Sbjct: 1529 IKTNAKVFSGVLSIMRLTGEGPTFDANTECNIAYTHLRFDVPKGTAQLYAGDDSALSCLP 1588

Query: 1084 PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQK 1263
            PE+PSFA  K ++ L +KPA   Q+RG WAEFCGYLITP G++KDP KL A++ LA+ Q 
Sbjct: 1589 PERPSFADFKQQLTLTSKPALFAQKRGFWAEFCGYLITPLGIMKDPAKLAATVVLAQKQN 1648

Query: 1264 KAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            K      +     +++LD KLAY   D L ++
Sbjct: 1649 K------LHECWRSHALDLKLAYVHRDALTEV 1674


>gb|AFM77886.1| replicase [Hosta virus X]
          Length = 1473

 Score =  556 bits (1434), Expect = e-155
 Identities = 276/453 (60%), Positives = 329/453 (72%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFL L RE+KI E +                 VE          E + +K  R
Sbjct: 980  EATPYLKTFLRLTREEKINEITPEEPKPKEPEPPKTHFPVETSAHLYSSITEEMPEKHAR 1039

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EI+ + HGHTNCVQ D+P  Q+F+HQQAKDEAL WETI+ARL I+T EAN++E   K+D+
Sbjct: 1040 EIYNKTHGHTNCVQTDEPLVQMFAHQQAKDEALFWETIEARLRITTSEANVQELNEKRDI 1099

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GD+L+  YHKAM LPK+   F  DLW  CA+EVQ TYL K IN IK GE+RQ PDF ++ 
Sbjct: 1100 GDLLFHAYHKAMGLPKDPIPFENDLWETCAQEVQQTYLSKPINLIKNGEKRQGPDFDKNA 1159

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            I++FLKSQWVKKMEKLGA  IKPGQTIASF Q  VMLYGTMARYMRR RD   P +I+IN
Sbjct: 1160 IMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGTMARYMRRIRDRFCPKHILIN 1219

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CEKTP  +S +V   WDFS  +YANDFTAFDQSQDGAMLQFEI+KAK+ N+PE +I GY+
Sbjct: 1220 CEKTPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGAMLQFEIIKAKFHNIPEDIILGYM 1279

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIK + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH RF +PE  AQ+YAGDD A+++V
Sbjct: 1280 DIKTNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTHLRFNVPENVAQVYAGDDSALSKV 1339

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEK SF    +R+ L++KP   PQ +G WAEFCG LITP+G+IKDP+KLHAS  LA   
Sbjct: 1340 CPEKDSFKQFADRLTLKSKPQVFPQTQGAWAEFCGLLITPRGIIKDPVKLHASWVLA--- 1396

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
             K G    I   + +Y  D KL+Y LGD LQ+L
Sbjct: 1397 TKLGTLQQI-KCVNSYGEDLKLSYDLGDHLQEL 1428


>ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CAF04078.1| replicase
            [Hosta virus X]
          Length = 1507

 Score =  556 bits (1434), Expect = e-155
 Identities = 276/453 (60%), Positives = 329/453 (72%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            EATPYLKTFL L RE+KI E +                 VE          E + +K  R
Sbjct: 1014 EATPYLKTFLRLTREEKINEITPEEPKPKEPEPPKTHFPVETSAHLYSSITEEMPEKHAR 1073

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EI+ + HGHTNCVQ D+P  Q+F+HQQAKDEAL WETI+ARL I+T EAN++E   K+D+
Sbjct: 1074 EIYNKTHGHTNCVQTDEPLVQMFAHQQAKDEALFWETIEARLRITTSEANVQELNEKRDI 1133

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GD+L+  YHKAM LPK+   F  DLW  CA+EVQ TYL K IN IK GE+RQ PDF ++ 
Sbjct: 1134 GDLLFHAYHKAMGLPKDPIPFENDLWETCAQEVQQTYLSKPINLIKNGEKRQGPDFDKNA 1193

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            I++FLKSQWVKKMEKLGA  IKPGQTIASF Q  VMLYGTMARYMRR RD   P +I+IN
Sbjct: 1194 IMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGTMARYMRRIRDRFCPKHILIN 1253

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CEKTP  +S +V   WDFS  +YANDFTAFDQSQDGAMLQFEI+KAK+ N+PE +I GY+
Sbjct: 1254 CEKTPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGAMLQFEIIKAKFHNIPEDIILGYM 1313

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIK + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH RF +PE  AQ+YAGDD A+++V
Sbjct: 1314 DIKTNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTHLRFNVPENVAQVYAGDDSALSKV 1373

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
            CPEK SF    +R+ L++KP   PQ +G WAEFCG LITP+G+IKDP+KLHAS  LA   
Sbjct: 1374 CPEKDSFKQFADRLTLKSKPQVFPQTQGAWAEFCGLLITPRGIIKDPVKLHASWVLA--- 1430

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
             K G    I   + +Y  D KL+Y LGD LQ+L
Sbjct: 1431 TKLGTLQQI-KCVNSYGEDLKLSYDLGDHLQEL 1462


>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
          Length = 1670

 Score =  548 bits (1412), Expect = e-153
 Identities = 267/452 (59%), Positives = 336/452 (74%)
 Frame = +1

Query: 4    ATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDRE 183
            +TPYLKTFLS +RED++ E                   VE++  +L+D  E L +K +RE
Sbjct: 1197 STPYLKTFLSTLREDRLREEGPKPETPEEPKPATTHFPVENENLSLEDKVEELLEKHERE 1256

Query: 184  IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLG 363
            +++  HG++NCVQ DDP  QLFSHQQAKD+ LLW TI+ARL IS P+AN+EEFR KK++G
Sbjct: 1257 LYSSDHGYSNCVQTDDPVVQLFSHQQAKDQTLLWATIEARLKISNPKANMEEFRMKKNVG 1316

Query: 364  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQI 543
            D+LW NY +AMKLP +  EFS +LW  CAEEVQ TYL K +N IK GE RQSPDF +H I
Sbjct: 1317 DVLWLNYKRAMKLPDKPIEFSHELWHACAEEVQKTYLSKPLNMIKNGENRQSPDFDKHTI 1376

Query: 544  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 723
             +FLKSQWVKK+EKLGA KIKPGQTIASFQQ  VMLYGTMARYMRR R A  P NI +NC
Sbjct: 1377 SLFLKSQWVKKLEKLGAPKIKPGQTIASFQQATVMLYGTMARYMRRIRQAFQPPNIQLNC 1436

Query: 724  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 903
            E+TPQ L+ ++ + W F +P+YANDFT FDQSQDGAMLQFE+LKAK+ N+PE +I+GY+D
Sbjct: 1437 EQTPQQLTTFIKDQWSFDQPAYANDFTQFDQSQDGAMLQFEVLKAKHHNIPEAIIQGYID 1496

Query: 904  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 1083
            IK + K+F G L+IMRLTGEGPTFDANTECNIA+ HTRF I + TAQ+YAGDD A +++ 
Sbjct: 1497 IKTNAKVFTGVLAIMRLTGEGPTFDANTECNIAFNHTRFHISDDTAQLYAGDDTAFSKIP 1556

Query: 1084 PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQK 1263
             EK SF  +  ++AL +KP +  Q++G+WAEFCGY ITP GLIK+P KL A+L LA  Q 
Sbjct: 1557 IEKVSFQGVAKQLALTSKPLFYKQKKGEWAEFCGYSITPLGLIKEPKKLQANLTLAIKQN 1616

Query: 1264 KAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
            K  +KD ++    +YS D  LAY   D+L ++
Sbjct: 1617 K--IKDTVN----SYSQDVALAYQHKDELYEI 1642


>gb|AAF67818.1|AF111193_1 replicase [Potato virus X]
          Length = 1456

 Score =  544 bits (1401), Expect = e-151
 Identities = 264/453 (58%), Positives = 333/453 (73%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            ++TPYLKTFLS+VRE  ++E+                  VE++ + L+++KE L +KFDR
Sbjct: 977  DSTPYLKTFLSVVREQTLKEYEPAEVEPIREPEPQTHMCVENEESVLEEYKEELLEKFDR 1036

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EI +E+HGH+NCVQ +D T QLFSHQQAKDE LLW TI ARL  S  E N  EF +KKD+
Sbjct: 1037 EIHSESHGHSNCVQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDI 1096

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GD+L+ NY KAM LPKE+  FS+++W  CA EVQ+ YL KS   +  G  RQSPDF E++
Sbjct: 1097 GDVLFLNYQKAMGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENK 1156

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            I++FLKSQWV K+EKLG  KIKPGQTIA+F Q  VML+GTMARYMR FR A  P  + IN
Sbjct: 1157 IMVFLKSQWVTKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFIN 1216

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CE TP+D+S W LN W+F +PS AND+TAFDQSQDGAMLQFE+LKAK+  +PE +I+ Y+
Sbjct: 1217 CETTPEDMSAWALNNWNFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYI 1276

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIK + +IFLGTLSIMRLTGEGPTFDANTECNIAYTHT+F+IP GTAQ+YAGDD A+  V
Sbjct: 1277 DIKTNAQIFLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCV 1336

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
               KPSF  L++++ L++KP  T Q++G W EFCG+LITPKG++KDP+KLH SL+LA+A 
Sbjct: 1337 PEVKPSFHRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEA- 1395

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
                 K  +     +Y +D   AY   D L DL
Sbjct: 1396 -----KGELKKCQDSYEIDLSYAYDHKDSLHDL 1423


>gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X]
          Length = 1456

 Score =  544 bits (1401), Expect = e-151
 Identities = 265/453 (58%), Positives = 333/453 (73%)
 Frame = +1

Query: 1    EATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKFDR 180
            ++TPYLKTFLS+VRE  ++E+                  VE++ + L+++KE L +KFDR
Sbjct: 977  DSTPYLKTFLSVVREQALKEYEPAEVESIREPEPQTHMCVENEESVLEEYKEELLEKFDR 1036

Query: 181  EIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDL 360
            EI +E+HGH+NCVQ +D T QLFSHQQAKDE LLW TI ARL  S  E N  EF +KKD+
Sbjct: 1037 EIHSESHGHSNCVQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDI 1096

Query: 361  GDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQ 540
            GD+L+ NY KAM LPKE+  FS+++W  CA EVQ+ YL KS   +  G  RQSPDF E++
Sbjct: 1097 GDVLFLNYQKAMGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENK 1156

Query: 541  ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMIN 720
            I++FLKSQWV K+EKLG  KIKPGQTIA+F Q  VML+GTMARYMR FR A  P  + IN
Sbjct: 1157 IMVFLKSQWVTKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFIN 1216

Query: 721  CEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYL 900
            CE TP+D+S WVLN WDF +PS AND+TAFDQSQDGAMLQFE+LKAK+  +PE +I+ Y+
Sbjct: 1217 CETTPEDMSAWVLNNWDFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYI 1276

Query: 901  DIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQV 1080
            DIK + +IFLGTLSIMRLTGEGPTFDANTECNIAYTHT+F+IP GTAQ+YAGDD A+  V
Sbjct: 1277 DIKTNAQIFLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCV 1336

Query: 1081 CPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ 1260
               K SF  L++++ L++KP  T Q++G W EFCG+LITPKG++KDP+KLH SL+LA+A 
Sbjct: 1337 PEVKHSFHRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEA- 1395

Query: 1261 KKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1359
                 K  +     +Y +D   AY   D L DL
Sbjct: 1396 -----KGELKKCQDSYEIDLSYAYDHKDSLHDL 1423