BLASTX nr result

ID: Ephedra27_contig00002037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00002037
         (931 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17931.1| unknown [Picea sitchensis]                              70   9e-10
ref|XP_004144859.1| PREDICTED: uncharacterized protein LOC101211...    59   3e-06
ref|XP_004956973.1| PREDICTED: uncharacterized protein LOC101778...    57   8e-06
ref|XP_002521257.1| conserved hypothetical protein [Ricinus comm...    57   1e-05

>gb|ABR17931.1| unknown [Picea sitchensis]
          Length = 175

 Score = 70.5 bits (171), Expect = 9e-10
 Identities = 56/163 (34%), Positives = 73/163 (44%), Gaps = 7/163 (4%)
 Frame = +3

Query: 165 PKNVAGFAKQSSHGSWILPKCMSRKASTSLRSDRQYRLTLNSPGRKSICSLLKCERKTHF 344
           P++ +GF KQS      L   M+   + SL ++  YRLT       S    LKC+  +  
Sbjct: 13  PRSCSGFVKQSFSDK--LKFGMNISHTKSLNTNLPYRLTAEVLVPPSFNLKLKCKYSSSK 70

Query: 345 RASVAG-------RGERQNIPVNXXXXXXXXXXXXXXXXWSDIKWMLLFIAEQPNQLKHI 503
             S  G       R +R  + ++                  D K  LLF+ EQP QLK+I
Sbjct: 71  MQSQQGSSRIMATRADRPYLSIDKDIDTDPFLLWLGKELLRDSKSALLFLWEQPGQLKYI 130

Query: 504 KWPSLQNTLKTAXXXXXXXXXXXXXXSSVDSGLRYLLESTLRR 632
           +WPS Q+TLKTA              SSVDS L YLL  TLRR
Sbjct: 131 EWPSFQSTLKTATLTLLLVMLLIIFLSSVDSVLSYLLVLTLRR 173


>ref|XP_004144859.1| PREDICTED: uncharacterized protein LOC101211352 [Cucumis sativus]
           gi|449506982|ref|XP_004162901.1| PREDICTED:
           uncharacterized LOC101211352 [Cucumis sativus]
          Length = 159

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 29/61 (47%), Positives = 39/61 (63%)
 Frame = +3

Query: 450 IKWMLLFIAEQPNQLKHIKWPSLQNTLKTAXXXXXXXXXXXXXXSSVDSGLRYLLESTLR 629
           ++ +L+F+ EQP+QLK+I+WPS Q+TLKTA              SSVDS L Y+L   LR
Sbjct: 97  LRSLLIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLILR 156

Query: 630 R 632
           R
Sbjct: 157 R 157


>ref|XP_004956973.1| PREDICTED: uncharacterized protein LOC101778721 isoform X1 [Setaria
           italica] gi|514730589|ref|XP_004956974.1| PREDICTED:
           uncharacterized protein LOC101778721 isoform X2 [Setaria
           italica]
          Length = 151

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 28/61 (45%), Positives = 38/61 (62%)
 Frame = +3

Query: 450 IKWMLLFIAEQPNQLKHIKWPSLQNTLKTAXXXXXXXXXXXXXXSSVDSGLRYLLESTLR 629
           +K ++ F+AEQP QLKH++WP LQNTLKTA              S+VD+ L Y+L   LR
Sbjct: 89  LKVLVAFLAEQPRQLKHLEWPGLQNTLKTATLTLVLVAVFIVALSTVDAALCYVLAWLLR 148

Query: 630 R 632
           +
Sbjct: 149 K 149


>ref|XP_002521257.1| conserved hypothetical protein [Ricinus communis]
           gi|223539525|gb|EEF41113.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 159

 Score = 57.0 bits (136), Expect = 1e-05
 Identities = 30/62 (48%), Positives = 38/62 (61%)
 Frame = +3

Query: 450 IKWMLLFIAEQPNQLKHIKWPSLQNTLKTAXXXXXXXXXXXXXXSSVDSGLRYLLESTLR 629
           +K + +F+ EQP+QLK+I+WPS  +TLKTA              SSVDS L YLL   LR
Sbjct: 97  MKSLFIFLVEQPSQLKYIEWPSFHSTLKTAILTLVIVALLIVALSSVDSILCYLLAWLLR 156

Query: 630 RP 635
           RP
Sbjct: 157 RP 158


Top