BLASTX nr result
ID: Ephedra27_contig00001966
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00001966
(648 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK22994.1| unknown [Picea sitchensis] 123 5e-26
gb|EMT28870.1| Glycine-rich RNA-binding protein 2, mitochondrial... 121 2e-25
gb|EMS65575.1| Glycine-rich RNA-binding protein 2, mitochondrial... 120 3e-25
ref|XP_006298696.1| hypothetical protein CARUB_v10014791mg, part... 117 4e-24
ref|XP_004971051.1| PREDICTED: glycine-rich RNA-binding protein ... 116 5e-24
ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [S... 116 5e-24
ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis... 116 6e-24
gb|ACN30953.1| unknown [Zea mays] 116 6e-24
gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays] 116 6e-24
ref|NP_001150149.1| LOC100283778 [Zea mays] gi|195605606|gb|ACG2... 116 6e-24
gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabi... 116 6e-24
ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group] g... 115 8e-24
ref|XP_006645227.1| PREDICTED: glycine-rich RNA-binding protein ... 115 1e-23
gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undul... 112 1e-22
gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica] 112 1e-22
gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca] 112 1e-22
gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana cleve... 112 1e-22
ref|XP_004301114.1| PREDICTED: polyadenylate-binding protein RBP... 111 2e-22
gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda] 111 2e-22
gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goods... 111 2e-22
>gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 123 bits (308), Expect = 5e-26
Identities = 57/85 (67%), Positives = 73/85 (85%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
R MSS+VFVGGL++ +DD LRE+F TFGDV +A++INDRETGRSRGFGFV++A+ +EA
Sbjct: 35 RCMSSKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVTFASPDEAN 94
Query: 410 NAVQGMDGKELAGRVVRVNLAQERT 484
AV+ MDGK+L GR +RVN+AQERT
Sbjct: 95 AAVEAMDGKDLQGRSIRVNIAQERT 119
>gb|EMT28870.1| Glycine-rich RNA-binding protein 2, mitochondrial [Aegilops
tauschii]
Length = 211
Score = 121 bits (303), Expect = 2e-25
Identities = 58/82 (70%), Positives = 69/82 (84%)
Frame = +2
Query: 242 SQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQNAVQ 421
S++FVGGLAWA DDH L+E FQ FG+V +ARVI DRETGRSRGFGFVS+A+ E+A++A +
Sbjct: 44 SKLFVGGLAWATDDHSLKEAFQCFGEVVEARVITDRETGRSRGFGFVSFASGEDAKSAAE 103
Query: 422 GMDGKELAGRVVRVNLAQERTS 487
MDGKELAGR VRVN A ER S
Sbjct: 104 NMDGKELAGRNVRVNFANERPS 125
>gb|EMS65575.1| Glycine-rich RNA-binding protein 2, mitochondrial [Triticum urartu]
Length = 173
Score = 120 bits (302), Expect = 3e-25
Identities = 57/82 (69%), Positives = 69/82 (84%)
Frame = +2
Query: 242 SQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQNAVQ 421
+++FVGGLAWA DDH L+E FQ+FG+V +ARVI DRETGRSRGFGFVS+A E +A +A +
Sbjct: 44 NKLFVGGLAWATDDHSLKEAFQSFGEVVEARVITDRETGRSRGFGFVSFANEADADSAAK 103
Query: 422 GMDGKELAGRVVRVNLAQERTS 487
GMDG+ELAGR VRVN A ER S
Sbjct: 104 GMDGQELAGRNVRVNFANERPS 125
>ref|XP_006298696.1| hypothetical protein CARUB_v10014791mg, partial [Capsella rubella]
gi|482567405|gb|EOA31594.1| hypothetical protein
CARUB_v10014791mg, partial [Capsella rubella]
Length = 167
Score = 117 bits (292), Expect = 4e-24
Identities = 55/86 (63%), Positives = 69/86 (80%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
R MS+++F+GGL+W DD L++ F +FGDVT+A VI DRETGRSRGFGFVSY +E+ A
Sbjct: 63 RYMSTKLFIGGLSWGTDDSSLKDAFSSFGDVTEATVIADRETGRSRGFGFVSYDSEDSAN 122
Query: 410 NAVQGMDGKELAGRVVRVNLAQERTS 487
NA++ MDGKEL GR +RVNLA ER S
Sbjct: 123 NAIKEMDGKELNGRNIRVNLANERPS 148
>ref|XP_004971051.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Setaria italica]
Length = 168
Score = 116 bits (291), Expect = 5e-24
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
RLMS+++FVGGL+W DD LR+ F TFG+VT+AR+I DRETGRSRGFGFV+++ +EA+
Sbjct: 33 RLMSTKLFVGGLSWGTDDQTLRQAFSTFGEVTEARIITDRETGRSRGFGFVNFSNSDEAK 92
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
AV MDG+EL GR VRVN A ER
Sbjct: 93 EAVSSMDGQELDGRSVRVNFANER 116
>ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein
SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 116 bits (291), Expect = 5e-24
Identities = 53/84 (63%), Positives = 69/84 (82%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
RLMS+++FVGGL+W +DD +LRE F FGDVT+ARVI DR+TG+SRGFGFV+Y + + A
Sbjct: 33 RLMSTKLFVGGLSWGVDDMKLREAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAAN 92
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
A+ GMDGKE+ GR VRVN+A +R
Sbjct: 93 AAISGMDGKEIDGRPVRVNIANDR 116
>ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding
protein 4 [Arabidopsis thaliana]
gi|75335048|sp|Q9LIS2.1|RBG4_ARATH RecName:
Full=Glycine-rich RNA-binding protein 4, mitochondrial;
Short=AtGR-RBP4; AltName: Full=AtRBG4; AltName:
Full=Glycine-rich protein 4; Short=AtGRP4; AltName:
Full=Mitochondrial RNA-binding protein 1b;
Short=At-mRBP1b; Flags: Precursor
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding
protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2
[Arabidopsis thaliana] gi|20453303|gb|AAM19890.1|
AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding
protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding
protein 4 [Arabidopsis thaliana]
Length = 136
Score = 116 bits (290), Expect = 6e-24
Identities = 55/86 (63%), Positives = 70/86 (81%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
R MSS++FVGGL+W DD L++ F +FG+VT+A VI DRETGRSRGFGFVS++ E+ A
Sbjct: 31 RYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSAN 90
Query: 410 NAVQGMDGKELAGRVVRVNLAQERTS 487
NA++ MDGKEL GR +RVNLA ER+S
Sbjct: 91 NAIKEMDGKELNGRQIRVNLATERSS 116
>gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 116 bits (290), Expect = 6e-24
Identities = 53/84 (63%), Positives = 69/84 (82%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
RLMS+++F+GGL W +DD +LRE F +FG+VT+ARVI DRETGRSRGFGFV+Y+ + A+
Sbjct: 33 RLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAK 92
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
A+ MDGKE+ GR VRVN+A ER
Sbjct: 93 EAISAMDGKEIDGRQVRVNMANER 116
>gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 116 bits (290), Expect = 6e-24
Identities = 53/84 (63%), Positives = 69/84 (82%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
RLMS+++F+GGL W +DD +LRE F +FG+VT+ARVI DRETGRSRGFGFV+Y+ + A+
Sbjct: 33 RLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAK 92
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
A+ MDGKE+ GR VRVN+A ER
Sbjct: 93 EAISAMDGKEIDGRQVRVNMANER 116
>ref|NP_001150149.1| LOC100283778 [Zea mays] gi|195605606|gb|ACG24633.1| glycine-rich
RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding
protein 2 [Zea mays] gi|195637130|gb|ACG38033.1|
glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding
protein 2 [Zea mays] gi|238009788|gb|ACR35929.1| unknown
[Zea mays] gi|413951537|gb|AFW84186.1| glycine-rich
RNA-binding protein 2 [Zea mays]
Length = 156
Score = 116 bits (290), Expect = 6e-24
Identities = 53/84 (63%), Positives = 69/84 (82%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
RLMS+++F+GGL W +DD +LRE F +FG+VT+ARVI DRETGRSRGFGFV+Y+ + A+
Sbjct: 33 RLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAK 92
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
A+ MDGKE+ GR VRVN+A ER
Sbjct: 93 EAISAMDGKEIDGRQVRVNMANER 116
>gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 116 bits (290), Expect = 6e-24
Identities = 55/86 (63%), Positives = 70/86 (81%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
R MSS++FVGGL+W DD L++ F +FG+VT+A VI DRETGRSRGFGFVS++ E+ A
Sbjct: 31 RYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSAN 90
Query: 410 NAVQGMDGKELAGRVVRVNLAQERTS 487
NA++ MDGKEL GR +RVNLA ER+S
Sbjct: 91 NAIKEMDGKELNGRQIRVNLATERSS 116
>ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica
Group] gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa
Japonica Group] gi|20805007|dbj|BAB92683.1| OsGRP2
[Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa
Japonica Group] gi|125528847|gb|EAY76961.1| hypothetical
protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein
OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 150
Score = 115 bits (289), Expect = 8e-24
Identities = 54/84 (64%), Positives = 70/84 (83%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
RLMS+++FVGGL+W +D L+E F +FGDVT+ARVINDRE+GRSRGFGFVS+A ++A+
Sbjct: 33 RLMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAK 92
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
+A+ MDGKEL GR +RVN A ER
Sbjct: 93 SAMDAMDGKELEGRSIRVNFANER 116
>ref|XP_006645227.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Oryza brachyantha]
Length = 143
Score = 115 bits (287), Expect = 1e-23
Identities = 53/84 (63%), Positives = 69/84 (82%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
RLMS+++FVGGL+W +D LR+ F +FGDVT+ARVI DRETGRSRGFGFV++ +EA+
Sbjct: 28 RLMSTKLFVGGLSWGTNDDSLRDAFTSFGDVTEARVITDRETGRSRGFGFVNFVNGDEAK 87
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
+A++ MDGKEL GR +RVN A ER
Sbjct: 88 SAMEAMDGKELGGRNIRVNFANER 111
>gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 112 bits (279), Expect = 1e-22
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
R MS+++FVGGL+W DD LR+ F TFGDV DARVI DR++GRSRGFGFV+++ +E A
Sbjct: 34 RCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESAN 93
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
A++ MDG+EL GR +RV++AQER
Sbjct: 94 EAIKAMDGQELQGRNIRVSIAQER 117
>gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 112 bits (279), Expect = 1e-22
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
R MS+++FVGGL+W DD LR+ F TFGDV DARVI DR++GRSRGFGFV+++ +E A
Sbjct: 34 RCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESAN 93
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
A++ MDG+EL GR +RV++AQER
Sbjct: 94 EAIKAMDGQELQGRNIRVSIAQER 117
>gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 112 bits (279), Expect = 1e-22
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
R MS+++FVGGL+W DD LR+ F TFGDV DARVI DR++GRSRGFGFV+++ +E A
Sbjct: 34 RCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESAN 93
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
A++ MDG+EL GR +RV++AQER
Sbjct: 94 EAIKAMDGQELQGRNIRVSIAQER 117
>gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 112 bits (279), Expect = 1e-22
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
R MS+++FVGGL+W DD LR+ F TFGDV DARVI DR++GRSRGFGFV+++ +E A
Sbjct: 34 RCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESAN 93
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
A++ MDG+EL GR +RV++AQER
Sbjct: 94 EAIKAMDGQELQGRNIRVSIAQER 117
>ref|XP_004301114.1| PREDICTED: polyadenylate-binding protein RBP47B-like [Fragaria
vesca subsp. vesca]
Length = 248
Score = 111 bits (278), Expect = 2e-22
Identities = 51/81 (62%), Positives = 66/81 (81%)
Frame = +2
Query: 239 SSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQNAV 418
SS+VF+GG+++ DD LRE F +GDV DAR+I DRETGRSRGFGFV+Y T EEA +A+
Sbjct: 42 SSKVFIGGVSYQTDDAGLREAFGRYGDVVDARIITDRETGRSRGFGFVTYTTPEEASSAI 101
Query: 419 QGMDGKELAGRVVRVNLAQER 481
QG+DGK+L GR++RVN A +R
Sbjct: 102 QGLDGKDLHGRIIRVNYATDR 122
>gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 111 bits (278), Expect = 2e-22
Identities = 51/84 (60%), Positives = 67/84 (79%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
R MS+++FVGGL+W DD LR+ F TFGDV DARVI DR++GRSRGFGFV+++ +E A
Sbjct: 34 RCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESAN 93
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
A++ MDG+EL GR +RV +AQER
Sbjct: 94 EAIKAMDGQELQGRNIRVTIAQER 117
>gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 111 bits (278), Expect = 2e-22
Identities = 51/84 (60%), Positives = 67/84 (79%)
Frame = +2
Query: 230 RLMSSQVFVGGLAWAIDDHQLRENFQTFGDVTDARVINDRETGRSRGFGFVSYATEEEAQ 409
R MS+++FVGGL+W DD LR+ TFGDV DARVI DR++GRSRGFGFV+++ +E A
Sbjct: 34 RCMSTKLFVGGLSWGTDDQSLRDALATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESAN 93
Query: 410 NAVQGMDGKELAGRVVRVNLAQER 481
A++ MDG+EL GR +RVN+AQER
Sbjct: 94 EAIKAMDGQELQGRNIRVNIAQER 117