BLASTX nr result

ID: Ephedra27_contig00001951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00001951
         (412 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23403.1| unknown [Picea sitchensis]                             119   4e-25
gb|ABK26584.1| unknown [Picea sitchensis]                             119   5e-25
ref|XP_002504740.1| predicted protein [Micromonas sp. RCC299] gi...    72   1e-10
emb|CCO20693.1| NAD-dependent epimerase/dehydratase [Bathycoccus...    64   2e-08
ref|XP_003078570.1| COG0702: Predicted nucleoside-diphosphate-su...    64   3e-08
ref|XP_005651803.1| NAD(P)-binding protein [Coccomyxa subellipso...    62   1e-07
ref|XP_005843890.1| hypothetical protein CHLNCDRAFT_37242 [Chlor...    61   1e-07
ref|XP_002949125.1| hypothetical protein VOLCADRAFT_80525 [Volvo...    57   3e-06

>gb|ABK23403.1| unknown [Picea sitchensis]
          Length = 305

 Score =  119 bits (298), Expect = 4e-25
 Identities = 61/105 (58%), Positives = 77/105 (73%)
 Frame = -2

Query: 315 KRVDSNMVACKAQMRSSYNQRKCFSTQRKLKVRCQAAEAVTIGNSTVLVAGGGGLGMEVA 136
           K   S+M   + +++ S      ++ Q   K RCQ+ + V I NSTVLVAGGGG+GMEVA
Sbjct: 42  KNKTSHMTKIRIRLQQSICLNVGWTKQHMWKARCQSEDTVKIDNSTVLVAGGGGVGMEVA 101

Query: 135 RQLVKAGSWVTVFQRTGKFQREIEDLGAMLAIGDVLDGSTIDKAF 1
           R+L K GSWVTVFQR+ KF++EIEDLGAMLAIGDVLD S++ KAF
Sbjct: 102 RKLAKTGSWVTVFQRSEKFRKEIEDLGAMLAIGDVLDSSSMTKAF 146


>gb|ABK26584.1| unknown [Picea sitchensis]
          Length = 178

 Score =  119 bits (297), Expect = 5e-25
 Identities = 61/105 (58%), Positives = 77/105 (73%)
 Frame = -2

Query: 315 KRVDSNMVACKAQMRSSYNQRKCFSTQRKLKVRCQAAEAVTIGNSTVLVAGGGGLGMEVA 136
           K   S+M   + +++ S      ++ Q   K RCQ+ + V I NSTVLVAGGGG+GMEVA
Sbjct: 42  KNKTSHMTKIRIRLQQSICLNVGWTKQHVWKARCQSEDTVKIDNSTVLVAGGGGVGMEVA 101

Query: 135 RQLVKAGSWVTVFQRTGKFQREIEDLGAMLAIGDVLDGSTIDKAF 1
           R+L K GSWVTVFQR+ KF++EIEDLGAMLAIGDVLD S++ KAF
Sbjct: 102 RKLAKTGSWVTVFQRSEKFRKEIEDLGAMLAIGDVLDSSSMTKAF 146


>ref|XP_002504740.1| predicted protein [Micromonas sp. RCC299]
           gi|226520008|gb|ACO65998.1| predicted protein
           [Micromonas sp. RCC299]
          Length = 243

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = -2

Query: 222 VRCQAAEA-VTIGNSTVLVAGGGGLGMEVARQLVKAGSWVTVFQRTGKFQREIEDLGAML 46
           VR + A A +   N +VLVAGG G+ M+V RQL  AG+WVTVFQR    + EIE +GA L
Sbjct: 5   VRAKPARADLDPDNISVLVAGGSGVAMDVVRQLKDAGTWVTVFQRKEDDRAEIEKMGAFL 64

Query: 45  AIGDVLDGSTIDKAF 1
           + GD LD +T+ KA+
Sbjct: 65  SKGDALDKATVKKAY 79


>emb|CCO20693.1| NAD-dependent epimerase/dehydratase [Bathycoccus prasinos]
          Length = 297

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/61 (50%), Positives = 41/61 (67%)
 Frame = -2

Query: 186 NSTVLVAGGGGLGMEVARQLVKAGSWVTVFQRTGKFQREIEDLGAMLAIGDVLDGSTIDK 7
           N +VLVAGG G+ M+V RQ+  AG+WVTV QR    ++EIE +G  L  GDV D  ++ K
Sbjct: 58  NISVLVAGGSGVAMDVFRQMTAAGTWVTVLQRHEDNRKEIESVGGFLVKGDVFDPKSVKK 117

Query: 6   A 4
           A
Sbjct: 118 A 118


>ref|XP_003078570.1| COG0702: Predicted nucleoside-diphosphate-sugar epimerases (ISS)
           [Ostreococcus tauri] gi|116057023|emb|CAL51450.1|
           COG0702: Predicted nucleoside-diphosphate-sugar
           epimerases (ISS) [Ostreococcus tauri]
          Length = 271

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/73 (45%), Positives = 44/73 (60%)
 Frame = -2

Query: 222 VRCQAAEAVTIGNSTVLVAGGGGLGMEVARQLVKAGSWVTVFQRTGKFQREIEDLGAMLA 43
           V  +AA  +   N +VLV GG G+ M+V RQL + G+W TV QR    ++EIE +G  L 
Sbjct: 37  VIARAAGDLEPDNISVLVCGGNGVAMDVFRQLTEKGTWATVLQRHETNRKEIESVGGFLV 96

Query: 42  IGDVLDGSTIDKA 4
            GD LD   +DKA
Sbjct: 97  KGDALDPKAVDKA 109


>ref|XP_005651803.1| NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]
           gi|384253785|gb|EIE27259.1| NAD(P)-binding protein
           [Coccomyxa subellipsoidea C-169]
          Length = 231

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/69 (44%), Positives = 45/69 (65%)
 Frame = -2

Query: 207 AEAVTIGNSTVLVAGGGGLGMEVARQLVKAGSWVTVFQRTGKFQREIEDLGAMLAIGDVL 28
           AEA+   N+++LVAGGGG+ + V R+L   GSWV + QR+   + EIE + A++  GD L
Sbjct: 4   AEALDPDNASILVAGGGGVALSVTRRLKDMGSWVWMLQRSDSRRSEIEKMMAIVVRGDAL 63

Query: 27  DGSTIDKAF 1
           +   I KAF
Sbjct: 64  NKDDIQKAF 72


>ref|XP_005843890.1| hypothetical protein CHLNCDRAFT_37242 [Chlorella variabilis]
           gi|307103529|gb|EFN51788.1| hypothetical protein
           CHLNCDRAFT_37242 [Chlorella variabilis]
          Length = 284

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = -2

Query: 219 RCQAAEA-VTIGNSTVLVAGGGGLGMEVARQLVKAGSWVTVFQRTGKFQREIEDLGAMLA 43
           RC A  + + + N++VLVAGGGG G+EV R+L   GSWV   QRT   ++EIE + A++ 
Sbjct: 28  RCVAPRSELDLDNASVLVAGGGGCGIEVTRRLKDLGSWVWQLQRTDVRRKEIESMMAIVV 87

Query: 42  IGDVLDGSTIDKAF 1
            GD      +++AF
Sbjct: 88  NGDACKPEDVERAF 101


>ref|XP_002949125.1| hypothetical protein VOLCADRAFT_80525 [Volvox carteri f.
           nagariensis] gi|300265427|gb|EFJ49618.1| hypothetical
           protein VOLCADRAFT_80525 [Volvox carteri f. nagariensis]
          Length = 268

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/78 (37%), Positives = 44/78 (56%)
 Frame = -2

Query: 234 RKLKVRCQAAEAVTIGNSTVLVAGGGGLGMEVARQLVKAGSWVTVFQRTGKFQREIEDLG 55
           R L +R  A+  +   N+++LV GGGG+ + V R+L   GSWV + QRT   + EIE + 
Sbjct: 31  RALTMRATASYELDPDNASILVCGGGGVALHVTRKLKDMGSWVWMMQRTDIRKAEIEKMM 90

Query: 54  AMLAIGDVLDGSTIDKAF 1
           A +  GD L    + + F
Sbjct: 91  AFVPKGDALSKDDVQRVF 108


Top