BLASTX nr result
ID: Ephedra27_contig00001915
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00001915
(764 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACN41220.1| unknown [Picea sitchensis] 92 1e-16
gb|ABK21856.1| unknown [Picea sitchensis] 92 1e-16
ref|XP_006358184.1| PREDICTED: polyadenylate-binding protein 2-l... 90 1e-15
ref|XP_004235203.1| PREDICTED: polyadenylate-binding protein 2-l... 88 3e-15
ref|XP_004235438.1| PREDICTED: polyadenylate-binding protein 2-l... 87 8e-15
ref|XP_006358185.1| PREDICTED: polyadenylate-binding protein 2-l... 86 1e-14
ref|XP_006828070.1| hypothetical protein AMTR_s00008p00267630 [A... 85 3e-14
ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-l... 80 6e-13
emb|CBI33270.3| unnamed protein product [Vitis vinifera] 80 6e-13
ref|XP_002511041.1| polyadenylate-binding protein, putative [Ric... 79 2e-12
ref|XP_002511038.1| polyadenylate-binding protein, putative [Ric... 79 2e-12
ref|NP_201329.1| RNA recognition motif-containing protein [Arabi... 78 3e-12
ref|XP_006279497.1| hypothetical protein CARUB_v10027046mg, part... 78 3e-12
ref|XP_002866661.1| polyadenylate-binding protein family protein... 78 3e-12
ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 i... 78 4e-12
ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 i... 78 4e-12
gb|ACU19123.1| unknown [Glycine max] 78 4e-12
ref|XP_002525843.1| poly-A binding protein, putative [Ricinus co... 78 4e-12
ref|XP_002961293.1| hypothetical protein SELMODRAFT_74095 [Selag... 77 5e-12
ref|XP_002983261.1| hypothetical protein SELMODRAFT_117870 [Sela... 77 5e-12
>gb|ACN41220.1| unknown [Picea sitchensis]
Length = 201
Score = 92.4 bits (228), Expect = 1e-16
Identities = 44/51 (86%), Positives = 47/51 (92%), Gaps = 1/51 (1%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFN-PYVAYRPWRGGY 615
VQNA+LLNESELHGRQLKVTAKRTNVPGMKQFRGRRF+ PY+ YRPWR Y
Sbjct: 128 VQNAILLNESELHGRQLKVTAKRTNVPGMKQFRGRRFSAPYMGYRPWRPPY 178
>gb|ABK21856.1| unknown [Picea sitchensis]
Length = 215
Score = 92.4 bits (228), Expect = 1e-16
Identities = 44/51 (86%), Positives = 47/51 (92%), Gaps = 1/51 (1%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFN-PYVAYRPWRGGY 615
VQNA+LLNESELHGRQLKVTAKRTNVPGMKQFRGRRF+ PY+ YRPWR Y
Sbjct: 142 VQNAILLNESELHGRQLKVTAKRTNVPGMKQFRGRRFSAPYMGYRPWRPPY 192
>ref|XP_006358184.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum tuberosum]
Length = 224
Score = 89.7 bits (221), Expect = 1e-15
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYRPWR 624
VQNA+LLNESELHGRQLKV+AKRTNVPGMKQFRGRRFNPY YRP R
Sbjct: 151 VQNALLLNESELHGRQLKVSAKRTNVPGMKQFRGRRFNPYAGYRPRR 197
>ref|XP_004235203.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum
lycopersicum]
Length = 224
Score = 88.2 bits (217), Expect = 3e-15
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYRPWR 624
VQNA+LLNESELHGR+LKV+AKRTNVPGMKQFRGRRFNPY YRP R
Sbjct: 151 VQNALLLNESELHGRRLKVSAKRTNVPGMKQFRGRRFNPYAGYRPRR 197
>ref|XP_004235438.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum
lycopersicum]
Length = 219
Score = 86.7 bits (213), Expect = 8e-15
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYRPWR 624
VQNA+LLNESELHGR+LKV+AKRTNVPGMKQFRGRRFNPY +RP R
Sbjct: 160 VQNALLLNESELHGRKLKVSAKRTNVPGMKQFRGRRFNPYAGFRPRR 206
>ref|XP_006358185.1| PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Solanum
tuberosum]
Length = 164
Score = 86.3 bits (212), Expect = 1e-14
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYRPWR 624
VQNA+LLNESELHGR+LKV+AKRTNVPGMKQFRGRRFNPY +RP R
Sbjct: 91 VQNALLLNESELHGRKLKVSAKRTNVPGMKQFRGRRFNPYAEFRPRR 137
>ref|XP_006828070.1| hypothetical protein AMTR_s00008p00267630 [Amborella trichopoda]
gi|548832705|gb|ERM95486.1| hypothetical protein
AMTR_s00008p00267630 [Amborella trichopoda]
Length = 220
Score = 84.7 bits (208), Expect = 3e-14
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYRPWR 624
VQNA+LLNESELHGRQLKV AKRTNVPGMKQFR RRFNPY+AYR R
Sbjct: 145 VQNALLLNESELHGRQLKVLAKRTNVPGMKQFRPRRFNPYLAYRSRR 191
>ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-like, partial [Vitis
vinifera]
Length = 130
Score = 80.5 bits (197), Expect = 6e-13
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYR 633
VQ A+LLNESELHGRQLKV AKRTNVPGMKQFR RRFNPY+ YR
Sbjct: 55 VQEALLLNESELHGRQLKVLAKRTNVPGMKQFRPRRFNPYMGYR 98
>emb|CBI33270.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 80.5 bits (197), Expect = 6e-13
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYR 633
VQ A+LLNESELHGRQLKV AKRTNVPGMKQFR RRFNPY+ YR
Sbjct: 70 VQEALLLNESELHGRQLKVLAKRTNVPGMKQFRPRRFNPYMGYR 113
>ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550156|gb|EEF51643.1| polyadenylate-binding
protein, putative [Ricinus communis]
Length = 231
Score = 79.0 bits (193), Expect = 2e-12
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYRPWR 624
VQNA+LLNESELHGRQLKV+AKRTN+PGMKQ+RGRR NPY +R R
Sbjct: 158 VQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNPYSGFRSRR 204
>ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550153|gb|EEF51640.1| polyadenylate-binding
protein, putative [Ricinus communis]
Length = 234
Score = 79.0 bits (193), Expect = 2e-12
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYRPWR 624
VQNA+LLNESELHGRQLKV+AKRTN+PGMKQ+RGRR NPY +R R
Sbjct: 174 VQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNPYSGFRSRR 220
>ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding
protein II-like [Arabidopsis thaliana]
gi|10178188|dbj|BAB11662.1| poly(A)-binding protein
II-like [Arabidopsis thaliana]
gi|23197620|gb|AAN15337.1| poly(A)-binding protein
II-like [Arabidopsis thaliana]
gi|332010647|gb|AED98030.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 78.2 bits (191), Expect = 3e-12
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYR 633
VQ A+ LNESELHGRQLKV KRTNVPG+KQFRGRRFNPY+ YR
Sbjct: 145 VQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYR 188
>ref|XP_006279497.1| hypothetical protein CARUB_v10027046mg, partial [Capsella rubella]
gi|482548201|gb|EOA12395.1| hypothetical protein
CARUB_v10027046mg, partial [Capsella rubella]
Length = 233
Score = 78.2 bits (191), Expect = 3e-12
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYR 633
VQ A+ LNESELHGRQLKV KRTNVPG+KQFRGRRFNPY+ YR
Sbjct: 158 VQEALQLNESELHGRQLKVMQKRTNVPGLKQFRGRRFNPYMGYR 201
>ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata] gi|297312496|gb|EFH42920.1|
polyadenylate-binding protein family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 220
Score = 78.2 bits (191), Expect = 3e-12
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYR 633
VQ A+ LNESELHGRQLKV KRTNVPG+KQFRGRRFNPY+ YR
Sbjct: 145 VQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYR 188
>ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 isoform X2 [Glycine max]
Length = 141
Score = 77.8 bits (190), Expect = 4e-12
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 3/53 (5%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAY---RPWRGGY 615
VQ A+LLNESELHGRQLKV KRTNVPGMKQ+R RRFNPY+AY RP+ Y
Sbjct: 66 VQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPY 118
>ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 isoform X1 [Glycine max]
Length = 215
Score = 77.8 bits (190), Expect = 4e-12
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 3/53 (5%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAY---RPWRGGY 615
VQ A+LLNESELHGRQLKV KRTNVPGMKQ+R RRFNPY+AY RP+ Y
Sbjct: 140 VQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPY 192
>gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 77.8 bits (190), Expect = 4e-12
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 3/53 (5%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAY---RPWRGGY 615
VQ A+LLNESELHGRQLKV KRTNVPGMKQ+R RRFNPY+AY RP+ Y
Sbjct: 140 VQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPY 192
>ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis]
gi|223534848|gb|EEF36537.1| poly-A binding protein,
putative [Ricinus communis]
Length = 198
Score = 77.8 bits (190), Expect = 4e-12
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAYRP 630
VQ A+LLNESELHGRQLKVTAKRTNVPGMKQFR RR NPY+ + P
Sbjct: 123 VQEALLLNESELHGRQLKVTAKRTNVPGMKQFRPRRPNPYMGFAP 167
>ref|XP_002961293.1| hypothetical protein SELMODRAFT_74095 [Selaginella moellendorffii]
gi|300172232|gb|EFJ38832.1| hypothetical protein
SELMODRAFT_74095 [Selaginella moellendorffii]
Length = 221
Score = 77.4 bits (189), Expect = 5e-12
Identities = 36/43 (83%), Positives = 40/43 (93%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAY 636
VQNA+LLNESELHGR LKV+AKRTNVPGMKQ+RGRRF+P AY
Sbjct: 146 VQNAILLNESELHGRPLKVSAKRTNVPGMKQYRGRRFDPSYAY 188
>ref|XP_002983261.1| hypothetical protein SELMODRAFT_117870 [Selaginella moellendorffii]
gi|300148946|gb|EFJ15603.1| hypothetical protein
SELMODRAFT_117870 [Selaginella moellendorffii]
Length = 219
Score = 77.4 bits (189), Expect = 5e-12
Identities = 36/43 (83%), Positives = 40/43 (93%)
Frame = -1
Query: 764 VQNAVLLNESELHGRQLKVTAKRTNVPGMKQFRGRRFNPYVAY 636
VQNA+LLNESELHGR LKV+AKRTNVPGMKQ+RGRRF+P AY
Sbjct: 144 VQNAILLNESELHGRPLKVSAKRTNVPGMKQYRGRRFDPSYAY 186