BLASTX nr result
ID: Ephedra27_contig00001905
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00001905 (1969 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_001774482.1| predicted protein [Physcomitrella patens] gi... 565 e-158 ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Ci... 563 e-158 gb|ESW32085.1| hypothetical protein PHAVU_002G291500g [Phaseolus... 561 e-157 ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri... 561 e-157 ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like iso... 559 e-156 ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like iso... 559 e-156 ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutr... 558 e-156 ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like iso... 558 e-156 ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like iso... 558 e-156 ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fr... 557 e-156 ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi... 557 e-156 ref|XP_002970284.1| hypothetical protein SELMODRAFT_147068 [Sela... 556 e-156 ref|XP_006363964.1| PREDICTED: DNA repair helicase XPB1-like [So... 556 e-155 ref|XP_002978447.1| hypothetical protein SELMODRAFT_109026 [Sela... 556 e-155 ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So... 555 e-155 dbj|BAB08508.1| DNA excision repair cross-complementing protein ... 555 e-155 ref|NP_568591.1| DNA repair helicase XPB2 [Arabidopsis thaliana]... 555 e-155 ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So... 555 e-155 ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]... 554 e-155 gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 i... 554 e-155 >ref|XP_001774482.1| predicted protein [Physcomitrella patens] gi|162674194|gb|EDQ60706.1| predicted protein [Physcomitrella patens] Length = 734 Score = 565 bits (1455), Expect = e-158 Identities = 304/606 (50%), Positives = 395/606 (65%), Gaps = 43/606 (7%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ LD LSKT++P ++ Sbjct: 48 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIITVLDRLSKTKLPKEI 107 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR-------------HPEIXXXXX 1646 +DFI+ ST+N GK+K L+ +E+ P ++A+ R P + Sbjct: 108 LDFIRGSTQNYGKVKLVLQKNRYFVESPFPEVLQALLRDDTISRARLASSEEPGVGSSSF 167 Query: 1645 XXXXXXXVT-----------------------CLEMNPLKVVQVRQKC--REINYPLVEE 1541 T E++P +V V+Q+C +NYP++EE Sbjct: 168 TVSRAPHETGAADPELLGGDDAVADAEEKDIHSFEIDPSQVEHVKQRCLPNALNYPMLEE 227 Query: 1540 YDYKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAA 1361 YD++ND P+LDIKL P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA Sbjct: 228 YDFRNDNVNPTLDIKLKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA 287 Query: 1360 VRLAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSM 1181 R++K VLC A +VSV+QWA QF+ W+T+ + +I TSD+K F ++VTTY+M Sbjct: 288 CRISKSVLCLATNAVSVDQWAFQFKLWSTVGDHQISRFTSDSK-ERFRGSVGVVVTTYNM 346 Query: 1180 YGYTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLR 1001 + G RS++S+ I+ I+ REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+R Sbjct: 347 VAFGGKRSEESQKIIEEIQNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVR 406 Query: 1000 EDEAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSG 821 EDE I+DL F+IGPKLYEANW DLV+ GY+A V C E+ CPMT EF REYL Sbjct: 407 EDERISDLNFLIGPKLYEANWLDLVKGGYIANVQCAEVWCPMTKEFYREYL--------- 457 Query: 820 AWSRREEKRSVQHTLYSVNPNKLMACEYLINYH-ESRNDKIIVFSDNLFALEKMGTLLKK 644 ++E R Q LY +NPNK ACE+LI +H E R DKIIVFSDNLFAL + T L+K Sbjct: 458 ---KKENSRKKQ-GLYVMNPNKFRACEFLIRFHEEQRGDKIIVFSDNLFALREYATKLRK 513 Query: 643 HMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEA 464 I G TSH ER +L F+ + TV LSKVGD SID+PEA V+IQISS SRRQEA Sbjct: 514 PFIYGPTSHHERTRILYAFKHSPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEA 573 Query: 463 QRLGRVLRPKLQSENGDGLSGG----QAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHT 296 QRLGR+LR K ++ D ++GG A FYSLVS DT EM Y++KRQQFL++QGY+F Sbjct: 574 QRLGRILRAK--GKHKDRMAGGTEEFNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKV 631 Query: 295 STDIPP 278 T +PP Sbjct: 632 ITSLPP 637 >ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Cicer arietinum] Length = 765 Score = 563 bits (1452), Expect = e-158 Identities = 304/608 (50%), Positives = 390/608 (64%), Gaps = 38/608 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ L+ LSKT++P ++ Sbjct: 80 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEM 139 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673 I FI ST N GK+K LK +E+ P +K + R Sbjct: 140 IKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDGISRARITSEGMHGDGFTIT 199 Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532 H E+ E++P +V V+Q+C +NYP++EEYD+ Sbjct: 200 KAAGEIEGTHDELLNEAEVAAAAEEKEAHAFEIDPSQVENVKQRCLPNALNYPMLEEYDF 259 Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352 +ND P L+++L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R+ Sbjct: 260 RNDTVNPDLEMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 319 Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172 K LC A +VSV+QWA QF+ W+T+ E++I TSD+K F A ++VTTY+M + Sbjct: 320 KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 378 Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992 G RS++SE I+ I REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+REDE Sbjct: 379 GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 438 Query: 991 AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812 I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 439 RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 486 Query: 811 RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635 ++E + LY +NPNK ACE+LINYHE +R DKIIVF+DNLFAL + L+K MI Sbjct: 487 -KKENSKKRQALYVMNPNKFRACEFLINYHERARGDKIIVFADNLFALTEYAMKLRKPMI 545 Query: 634 RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455 G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQISS SRRQEAQRL Sbjct: 546 YGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 605 Query: 454 GRVLRP--KLQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTDIP 281 GR+LR KLQ G A FYSLVS DT EM Y++KRQQFL++QGY+F T +P Sbjct: 606 GRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 665 Query: 280 PLCERDRL 257 P E RL Sbjct: 666 PSDEGSRL 673 >gb|ESW32085.1| hypothetical protein PHAVU_002G291500g [Phaseolus vulgaris] Length = 768 Score = 561 bits (1446), Expect = e-157 Identities = 301/601 (50%), Positives = 387/601 (64%), Gaps = 38/601 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E T++ L+ LSKT++P ++ Sbjct: 83 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEM 142 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673 I FI ST N GK+K LK +E+ P +K + R Sbjct: 143 IKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDAISRARIISENVNGDGFTIS 202 Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532 H E+ E++P +V V+Q+C +NYP++EEYD+ Sbjct: 203 KAAGEIEGTHDELLNEAEVAAVAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDF 262 Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352 +ND P LD++L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R+ Sbjct: 263 RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 322 Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172 K LC A +VSV+QWA QF+ W+T+ E++I TSD+K F A ++VTTY+M + Sbjct: 323 KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 381 Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992 G RS++SE I+ I REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+REDE Sbjct: 382 GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 441 Query: 991 AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812 I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 442 RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTREFFAEYL------------ 489 Query: 811 RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635 ++E + LY +NPNK ACE+LINYHE +R DKIIVF+DNLFAL + L+K MI Sbjct: 490 -KKENSKKRQALYVMNPNKFRACEFLINYHERARGDKIIVFADNLFALTEYAMKLRKPMI 548 Query: 634 RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455 G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQISS SRRQEAQRL Sbjct: 549 YGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 608 Query: 454 GRVLRP--KLQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTDIP 281 GR+LR KLQ G A FYSLVS DT EM Y++KRQQFL++QGY+F T +P Sbjct: 609 GRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 668 Query: 280 P 278 P Sbjct: 669 P 669 >ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis] gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis] Length = 768 Score = 561 bits (1446), Expect = e-157 Identities = 301/604 (49%), Positives = 391/604 (64%), Gaps = 40/604 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ L+ LSKT++P ++ Sbjct: 82 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEM 141 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619 IDFI ST N GK+K LK ++E+ P +K + + I + Sbjct: 142 IDFIHGSTANYGKVKLVLKKNRYLVESPFPEVLKRLLKDEVISRARLVSEAHVNGSFTIS 201 Query: 1618 -----------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYDY 1532 E++P +V V+Q+C +NYP++EEYD+ Sbjct: 202 KTAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDF 261 Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352 +ND P LD++L P AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R+ Sbjct: 262 RNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 321 Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172 K LC A +VSV+QWA QF+ W+T+ E++I TSD+K F A ++VTTY+M + Sbjct: 322 KKSCLCLATNAVSVDQWAFQFQLWSTIREEQICRFTSDSK-ERFQGNAGVVVTTYNMVAF 380 Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992 G RS++SE I+ I REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+REDE Sbjct: 381 GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDE 440 Query: 991 AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812 I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 441 RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 488 Query: 811 RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635 ++E + LY +NPNK ACE+LI +HE R DKIIVF+DNLFAL + L+K MI Sbjct: 489 -KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMI 547 Query: 634 RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455 G TSH ER +L+ F+T+K TV LSKVGD SID+PEA V+IQISS SRRQEAQRL Sbjct: 548 YGATSHAERTKILQAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 607 Query: 454 GRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTD 287 GR+LR K ++ D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 608 GRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITS 665 Query: 286 IPPL 275 +PPL Sbjct: 666 LPPL 669 >ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max] Length = 769 Score = 559 bits (1440), Expect = e-156 Identities = 303/612 (49%), Positives = 394/612 (64%), Gaps = 40/612 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+ AYDF IA+AEP R + HEY +T SLY AVS G+E T++ L+ LSKT++P ++ Sbjct: 83 YKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVINVLNKLSKTKLPKEM 142 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673 I FI ST N GK+K LK IE+ P +K + R Sbjct: 143 IKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRLISENVNGDGFTIS 202 Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532 H E+ E++P +V V+Q+C +NYP++EEYD+ Sbjct: 203 KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 262 Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352 +ND P LD++L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R+ Sbjct: 263 RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 322 Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172 K LC A +VSV+QWA QF+ W+T+ E++I TSD+K F A ++VTTY+M + Sbjct: 323 KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 381 Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992 G RS++SE I+ I REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+REDE Sbjct: 382 GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 441 Query: 991 AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812 I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 442 RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 489 Query: 811 RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635 ++E + LY +NPNK ACE+LIN+HE +R DKIIVF+DNLFAL + L+K MI Sbjct: 490 -KKENSKKRQALYVMNPNKFRACEFLINFHEGTRGDKIIVFADNLFALTEYAMKLRKPMI 548 Query: 634 RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455 G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQISS SRRQEAQRL Sbjct: 549 YGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 608 Query: 454 GRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTD 287 GR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 609 GRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITS 666 Query: 286 IPPLCERDRLCF 251 +PP E L + Sbjct: 667 LPPPDEGPNLSY 678 >ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max] Length = 768 Score = 559 bits (1440), Expect = e-156 Identities = 303/612 (49%), Positives = 394/612 (64%), Gaps = 40/612 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+ AYDF IA+AEP R + HEY +T SLY AVS G+E T++ L+ LSKT++P ++ Sbjct: 82 YKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVINVLNKLSKTKLPKEM 141 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673 I FI ST N GK+K LK IE+ P +K + R Sbjct: 142 IKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRLISENVNGDGFTIS 201 Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532 H E+ E++P +V V+Q+C +NYP++EEYD+ Sbjct: 202 KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 261 Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352 +ND P LD++L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R+ Sbjct: 262 RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 321 Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172 K LC A +VSV+QWA QF+ W+T+ E++I TSD+K F A ++VTTY+M + Sbjct: 322 KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 380 Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992 G RS++SE I+ I REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+REDE Sbjct: 381 GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 440 Query: 991 AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812 I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 441 RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 488 Query: 811 RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635 ++E + LY +NPNK ACE+LIN+HE +R DKIIVF+DNLFAL + L+K MI Sbjct: 489 -KKENSKKRQALYVMNPNKFRACEFLINFHEGTRGDKIIVFADNLFALTEYAMKLRKPMI 547 Query: 634 RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455 G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQISS SRRQEAQRL Sbjct: 548 YGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 607 Query: 454 GRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTD 287 GR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 608 GRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITS 665 Query: 286 IPPLCERDRLCF 251 +PP E L + Sbjct: 666 LPPPDEGPNLSY 677 >ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutrema salsugineum] gi|557106496|gb|ESQ46811.1| hypothetical protein EUTSA_v10027651mg [Eutrema salsugineum] Length = 769 Score = 558 bits (1439), Expect = e-156 Identities = 303/604 (50%), Positives = 388/604 (64%), Gaps = 41/604 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ L+ LSKT++P ++ Sbjct: 84 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEM 143 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619 IDFI ST N GK+K LK IE+ P +K + I Sbjct: 144 IDFIYASTANYGKVKLVLKKNRYFIESPFPEVLKTLLSDGVISRARFSSEPYYGGDGFTV 203 Query: 1618 ------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYD 1535 E++P +V V+Q+C E+NYP++EEYD Sbjct: 204 GKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPAQVENVKQRCLPSELNYPMLEEYD 263 Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355 ++ND P LDI+L P AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R Sbjct: 264 FRNDNVNPDLDIELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAAR 323 Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175 + K VLC A +VSV+QWA QF+ W+T+ + +I TSD+K +F A ++VTTY+M Sbjct: 324 IKKSVLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSK-EKFRGNAGVVVTTYNMVA 382 Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995 + G RS+DS+ I+ + REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+RED Sbjct: 383 FGGKRSEDSQMIIEDMRNREWGLLLMDEVHVVPANMFRKVISITKSHCKLGLTATLVRED 442 Query: 994 EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815 E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 443 ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 491 Query: 814 SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638 ++E + LY +NPNK ACE+LI +HE R DKIIVF+DNLFAL + L+K M Sbjct: 492 --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 549 Query: 637 IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458 I G TSH ER +L F+T+K TV LSKVGD SID+PEA V+IQISS SRRQEAQR Sbjct: 550 IYGATSHIERTKILEAFKTSKDLNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 609 Query: 457 LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290 LGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 610 LGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 667 Query: 289 DIPP 278 +PP Sbjct: 668 SLPP 671 >ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max] Length = 769 Score = 558 bits (1438), Expect = e-156 Identities = 302/612 (49%), Positives = 394/612 (64%), Gaps = 40/612 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+ AYDF IA+AEP R + HEY +T SLY AVS G+E T++ L+ LSKT++P ++ Sbjct: 83 YKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEM 142 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673 + FI ST N GK+K LK IE+ P +K + R Sbjct: 143 VKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRIISENVNGDGFTIS 202 Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532 H E+ E++P +V V+Q+C +NYP++EEYD+ Sbjct: 203 KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 262 Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352 +ND P LD++L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R+ Sbjct: 263 RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 322 Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172 K LC A +VSV+QWA QF+ W+T+ E++I TSD+K F A ++VTTY+M + Sbjct: 323 KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 381 Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992 G RS++SE I+ I REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+REDE Sbjct: 382 GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 441 Query: 991 AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812 I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 442 RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 489 Query: 811 RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635 ++E + LY +NPNK ACE+LIN+HE +R DKIIVF+DNLFAL + L+K MI Sbjct: 490 -KKENSKKRQALYVMNPNKFRACEFLINFHERTRGDKIIVFADNLFALTEYAMKLRKPMI 548 Query: 634 RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455 G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQISS SRRQEAQRL Sbjct: 549 YGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 608 Query: 454 GRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTD 287 GR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 609 GRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITS 666 Query: 286 IPPLCERDRLCF 251 +PP E L + Sbjct: 667 LPPPDEGPNLSY 678 >ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max] Length = 768 Score = 558 bits (1438), Expect = e-156 Identities = 302/612 (49%), Positives = 394/612 (64%), Gaps = 40/612 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+ AYDF IA+AEP R + HEY +T SLY AVS G+E T++ L+ LSKT++P ++ Sbjct: 82 YKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEM 141 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673 + FI ST N GK+K LK IE+ P +K + R Sbjct: 142 VKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRIISENVNGDGFTIS 201 Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532 H E+ E++P +V V+Q+C +NYP++EEYD+ Sbjct: 202 KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 261 Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352 +ND P LD++L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R+ Sbjct: 262 RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 321 Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172 K LC A +VSV+QWA QF+ W+T+ E++I TSD+K F A ++VTTY+M + Sbjct: 322 KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 380 Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992 G RS++SE I+ I REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+REDE Sbjct: 381 GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 440 Query: 991 AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812 I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 441 RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 488 Query: 811 RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635 ++E + LY +NPNK ACE+LIN+HE +R DKIIVF+DNLFAL + L+K MI Sbjct: 489 -KKENSKKRQALYVMNPNKFRACEFLINFHERTRGDKIIVFADNLFALTEYAMKLRKPMI 547 Query: 634 RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455 G TSH ER +L+ F+T+K T+ LSKVGD SID+PEA V+IQISS SRRQEAQRL Sbjct: 548 YGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 607 Query: 454 GRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTD 287 GR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 608 GRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITS 665 Query: 286 IPPLCERDRLCF 251 +PP E L + Sbjct: 666 LPPPDEGPNLSY 677 >ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fragaria vesca subsp. vesca] Length = 768 Score = 557 bits (1435), Expect = e-156 Identities = 300/602 (49%), Positives = 384/602 (63%), Gaps = 39/602 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ LD LSKT++P ++ Sbjct: 82 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETQTIISVLDKLSKTKLPKEM 141 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619 IDFI ST N GK+K LK +E+ P +K + R I Sbjct: 142 IDFIHGSTANYGKVKLVLKKNRYYVESPFPEVLKKLLRDDVISKARIVSEAANEKGGFTI 201 Query: 1618 ------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYD 1535 E++P +V +V+++C +NYP++EEYD Sbjct: 202 SKTLGEIAADSSGLLNEAELAAAAEEKETHAFEIDPSQVEKVKERCLPNALNYPMLEEYD 261 Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355 ++ND P LD++L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R Sbjct: 262 FRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 321 Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175 + K LC A +VSV+QWA QF+ W+T+ ++ I TSD+K F A ++VTTY+M Sbjct: 322 IKKSCLCLATNAVSVDQWAFQFKLWSTIRDEHICRFTSDSK-ERFRGNAGVVVTTYNMVA 380 Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995 + G RS++SE I+ I REWGL+LMDEVHVVPA+ FR+ +A T+SHCKLGLTATL+RED Sbjct: 381 FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAQMFRKVIAITKSHCKLGLTATLVRED 440 Query: 994 EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815 E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 441 ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 489 Query: 814 SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638 ++E + LY +NPNK ACE+LI +HE R DKIIVF+DNLFAL + L+K M Sbjct: 490 --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 547 Query: 637 IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458 I G TSH ER +L F+T+K TV LSKVGD SID+PEA V+IQISS SRRQEAQR Sbjct: 548 IYGATSHVERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 607 Query: 457 LGRVLRP--KLQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTDI 284 LGR+LR KL+ G A FYSLVS DT EM Y++KRQQFL++QGY+F T + Sbjct: 608 LGRILRAKGKLRDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSL 667 Query: 283 PP 278 PP Sbjct: 668 PP 669 >ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera] Length = 771 Score = 557 bits (1435), Expect = e-156 Identities = 300/602 (49%), Positives = 383/602 (63%), Gaps = 39/602 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ L LSKT++P ++ Sbjct: 84 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEM 143 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAI------------------------ 1679 IDFI ST N GK+K LK +E+ P +K + Sbjct: 144 IDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRSRISHEGSTGNDGFTI 203 Query: 1678 --------ARHPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYD 1535 RH E+ E++P +V V+Q+C +NYP++EEYD Sbjct: 204 SKTVGEIEGRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNALNYPMLEEYD 263 Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355 ++ND P LD++L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R Sbjct: 264 FRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR 323 Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175 + K LC A +VSV+QWA QF+ W+T+ +++I TSD+K F A ++VTTY+M Sbjct: 324 IRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSK-ERFRGNAGVVVTTYNMVA 382 Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995 + G RS++SE I+ I REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+RED Sbjct: 383 FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 442 Query: 994 EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815 E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 443 ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 491 Query: 814 SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638 ++E + LY +NPNK ACE+LI +HE R DKIIVF+DNLFAL + L+K M Sbjct: 492 --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 549 Query: 637 IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458 I G TSH ER +L F+T K T+ LSKVGD SID+PEA V+IQISS SRRQEAQR Sbjct: 550 IYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 609 Query: 457 LGRVLRPK--LQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTDI 284 LGR+LR K LQ G A FYSLVS DT EM Y++KRQQFL++QGY+F T + Sbjct: 610 LGRILRAKGRLQDRLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSL 669 Query: 283 PP 278 PP Sbjct: 670 PP 671 >ref|XP_002970284.1| hypothetical protein SELMODRAFT_147068 [Selaginella moellendorffii] gi|300161800|gb|EFJ28414.1| hypothetical protein SELMODRAFT_147068 [Selaginella moellendorffii] Length = 713 Score = 556 bits (1434), Expect = e-156 Identities = 296/601 (49%), Positives = 387/601 (64%), Gaps = 38/601 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R +H HEY +T SLY AVS G+E T++ L+ LSK ++P ++ Sbjct: 34 YKQAYDFLIAIAEPVCRPEHMHEYNLTPHSLYAAVSVGLETQTVITVLERLSKARLPQEI 93 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXV----- 1622 ++FIK+ST N GK+K L+ +E+S P ++ + + I Sbjct: 94 VNFIKESTLNYGKVKLVLQKNRYFVESSYPEILERVLKDDVISRARIFSEASAEHGFTVN 153 Query: 1621 --------------------------TCLEMNPLKVVQVRQKC--REINYPLVEEYDYKN 1526 E++P +V V+Q+C +NYP++EEYD++N Sbjct: 154 KSLSNATTEQDLLAGDEVAAGEEKDVMSFEIDPAQVEHVKQRCLPSALNYPMLEEYDFRN 213 Query: 1525 DGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRLAK 1346 D P L I+L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R+ K Sbjct: 214 DSVNPDLSIELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRK 273 Query: 1345 PVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGYTG 1166 LC A +VSV+QWA QF+ W+T+ + +I TSD+K +F ++VTTY+M + G Sbjct: 274 SCLCLATNAVSVDQWAFQFKLWSTIRDDQISRFTSDSK-DKFKSNVGVVVTTYNMVAFKG 332 Query: 1165 HRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDEAI 986 RS++SE ++ I+ REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+REDE I Sbjct: 333 KRSEESEKVIELIKSREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERI 392 Query: 985 NDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWSRR 806 DL F+IGPKLYEANW DLV+ GY+A V C E+ CPMT EF EYL ++ Sbjct: 393 TDLNFLIGPKLYEANWLDLVKGGYIANVQCAEVWCPMTKEFYAEYL------------KK 440 Query: 805 EEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMIRG 629 E ++ Q LY +NPNK ACE+LI +HE R DKIIVFSDNLFAL + T LK+ I G Sbjct: 441 ENRK--QQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFSDNLFALREYATKLKRPFIYG 498 Query: 628 DTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLGR 449 TSH ER +L F+ + TV LSKVGD SID+PEA V+IQISS SRRQEAQRLGR Sbjct: 499 PTSHHERTKILYAFKHSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGR 558 Query: 448 VLRPKLQSENGDGLSGG----QAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTDIP 281 +LR K + D + GG A FYSLVS DT EM Y+SKRQQFL++QGY+F T +P Sbjct: 559 ILRAK--GKPKDRVKGGTEEFNAFFYSLVSTDTQEMYYSSKRQQFLIDQGYSFKVLTSLP 616 Query: 280 P 278 P Sbjct: 617 P 617 >ref|XP_006363964.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum] Length = 728 Score = 556 bits (1433), Expect = e-155 Identities = 293/569 (51%), Positives = 378/569 (66%), Gaps = 6/569 (1%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y QA DF IA+AEP SR HEY +T SLY AVS ++ TI+ L+ LSKT +P +V Sbjct: 69 YHQASDFLIAIAEPVSRPNSIHEYNLTPHSLYAAVSVSLQTHTIISVLNKLSKTNLPKEV 128 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT--CL 1613 +DFI+ ST N GK+K LK IE+ P +K + + I Sbjct: 129 VDFIQSSTSNYGKVKLVLKKNRYFIESPCPLVLKTLLKDDVISRARIANTIEEEEAEYSF 188 Query: 1612 EMNPLKVVQVRQKC--REINYPLVEEYDYKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMF 1439 E++P +V V+Q+C +NYP++EEYD++ND P LDI+L AQ RPYQ +S+ KMF Sbjct: 189 EIDPAQVESVKQRCLPNALNYPMLEEYDFRNDTVNPDLDIELKINAQPRPYQVKSLSKMF 248 Query: 1438 VRGKARSGVIVLPCGAGKSLTGVYAAVRLAKPVLCFANTSVSVEQWASQFRHWTTLPEKK 1259 G+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWA QFR W+T+ + + Sbjct: 249 GNGRARSGIIVLPCGAGKSLVGVSAATRINKSCLCLATNAVSVDQWAYQFRLWSTIRDDQ 308 Query: 1258 IQTVTSDTKASEFDPKADIMVTTYSMYGYTGHRSKDSESIMGAIEGREWGLILMDEVHVV 1079 I T+D+K +F A ++VTTY+M + G RS++SE ++ I REWGL+L+DEVHVV Sbjct: 309 ICRFTTDSK-EQFRGDAGVVVTTYNMVAFGGKRSEESEKLIEQIRNREWGLLLLDEVHVV 367 Query: 1078 PAKNFREAVARTRSHCKLGLTATLLREDEAINDLEFIIGPKLYEANWQDLVQAGYLATVT 899 PA+ FR+ ++ T+SHCKLGLTATL+REDE I DL F+IGPKLYEANW DL + G++A V Sbjct: 368 PAQMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWSDLAKGGFIANVQ 427 Query: 898 CFEILCPMTSEFLREYLNLFLHNNSGAWSRREEKRSVQHTLYSVNPNKLMACEYLINYHE 719 C E+ CPMT EF EYL ++E + LY +NPNK ACE+LI +HE Sbjct: 428 CAEVWCPMTKEFFAEYL-------------KQENHRKRKALYVMNPNKFRACEFLIRFHE 474 Query: 718 -SRNDKIIVFSDNLFALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVG 542 R+DKIIVFSDNLFAL + L+K MI G TSH ER+ +L FRT T+ LSKVG Sbjct: 475 QQRDDKIIVFSDNLFALTEYSMRLRKPMIYGCTSHAERMKILEAFRTNPEVNTIFLSKVG 534 Query: 541 DTSIDLPEATVVIQISSQGASRRQEAQRLGRVLRPK-LQSENGDGLSGGQAIFYSLVSQD 365 D SID+PEA V+IQISS SRRQEAQRLGR+LR K + + G A FYSLVS D Sbjct: 535 DNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKRARLQGGSKTEEYDAFFYSLVSTD 594 Query: 364 TAEMLYASKRQQFLVNQGYTFHTSTDIPP 278 T EM Y++KRQQFL++QGY+F T++PP Sbjct: 595 TQEMYYSTKRQQFLIDQGYSFKVITNLPP 623 >ref|XP_002978447.1| hypothetical protein SELMODRAFT_109026 [Selaginella moellendorffii] gi|300153796|gb|EFJ20433.1| hypothetical protein SELMODRAFT_109026 [Selaginella moellendorffii] Length = 733 Score = 556 bits (1432), Expect = e-155 Identities = 296/605 (48%), Positives = 388/605 (64%), Gaps = 42/605 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R +H HEY +T SLY AVS G+E T++ L+ LSK ++P ++ Sbjct: 50 YKQAYDFLIAIAEPVCRPEHMHEYNLTPHSLYAAVSVGLETQTVITVLERLSKARLPQEI 109 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619 ++FIK+ST N GK+K L+ +E+S P ++ + + I + Sbjct: 110 VNFIKESTLNYGKVKLVLQKNRYFVESSYPEILERVLKDDVISRARIFSEACESFSFNHG 169 Query: 1618 -------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEY 1538 E++P +V V+Q+C +NYP++EEY Sbjct: 170 FTVNKSLSNATTEQDLLAGDEVAAGEEKDVMSFEIDPAQVEHVKQRCLPSALNYPMLEEY 229 Query: 1537 DYKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAV 1358 D++ND P L I+L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA Sbjct: 230 DFRNDSVNPDLSIELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 289 Query: 1357 RLAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMY 1178 R+ K LC A +VSV+QWA QF+ W+T+ + +I TSD+K +F ++VTTY+M Sbjct: 290 RIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQISRFTSDSK-DKFKSNVGVVVTTYNMV 348 Query: 1177 GYTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRE 998 + G RS++SE ++ I+ REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+RE Sbjct: 349 AFKGKRSEESEKVIELIKSREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRE 408 Query: 997 DEAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGA 818 DE I DL F+IGPKLYEANW DLV+ GY+A V C E+ CPMT EF EYL Sbjct: 409 DERITDLNFLIGPKLYEANWLDLVKGGYIANVQCAEVWCPMTKEFYAEYL---------- 458 Query: 817 WSRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKH 641 ++E ++ Q LY +NPNK ACE+LI +HE R DKIIVFSDNLFAL + T LK+ Sbjct: 459 --KKENRK--QQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFSDNLFALREYATKLKRP 514 Query: 640 MIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQ 461 I G TSH ER +L F+ + TV LSKVGD SID+PEA V+IQISS SRRQEAQ Sbjct: 515 FIYGPTSHHERTKILYAFKHSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQ 574 Query: 460 RLGRVLRPKLQSENGDGLSGG----QAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTS 293 RLGR+LR K + D + GG A FYSLVS DT EM Y+SKRQQFL++QGY+F Sbjct: 575 RLGRILRAK--GKPKDRVKGGTEEFNAFFYSLVSTDTQEMYYSSKRQQFLIDQGYSFKVL 632 Query: 292 TDIPP 278 T +PP Sbjct: 633 TSLPP 637 >ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum] Length = 768 Score = 555 bits (1431), Expect = e-155 Identities = 300/604 (49%), Positives = 387/604 (64%), Gaps = 41/604 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ L LSKT++P ++ Sbjct: 86 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEM 145 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673 IDFI ST N GK+K LK IE+ P +K + Sbjct: 146 IDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTV 205 Query: 1672 ----------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYD 1535 H E+ E++P +V V+Q+C +NYP++EEYD Sbjct: 206 SKPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYD 265 Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355 ++ND P LD++L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R Sbjct: 266 FRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 325 Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175 + K LC A +VSV+QWA QF+ W+T+ E++I TSD+K F ++VTTY+M Sbjct: 326 IKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNVGVVVTTYNMVA 384 Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995 + G RS++SE I+ I REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+RED Sbjct: 385 FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 444 Query: 994 EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815 E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 445 ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 493 Query: 814 SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638 ++E + LY +NPNK ACE+LI +HE R DKIIVF+DNLFAL + L+K M Sbjct: 494 --KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 551 Query: 637 IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458 I G TSH ER +L F+T+K T+ LSKVGD SID+PEA V+IQISS SRRQEAQR Sbjct: 552 IYGATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 611 Query: 457 LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290 LGR+LR K ++ D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 612 LGRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 669 Query: 289 DIPP 278 +PP Sbjct: 670 SLPP 673 >dbj|BAB08508.1| DNA excision repair cross-complementing protein [Arabidopsis thaliana] Length = 754 Score = 555 bits (1430), Expect = e-155 Identities = 300/604 (49%), Positives = 385/604 (63%), Gaps = 41/604 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ L+ LSKT++P ++ Sbjct: 71 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPGEI 130 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619 IDFI ST N GK+K LK IE+ P +K + I Sbjct: 131 IDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFTSEPYYGGDGFTI 190 Query: 1618 ------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYD 1535 E++P V V+Q+C +NYP++EEYD Sbjct: 191 GKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPALVENVKQRCLPNALNYPMLEEYD 250 Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355 ++ND P LD++L P AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R Sbjct: 251 FRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAAR 310 Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175 + K LC A +VSV+QWA QF+ W+T+ + +I TSD+K F A ++VTTY+M Sbjct: 311 IKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQICRFTSDSK-ERFRGNAGVVVTTYNMIA 369 Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995 + G RS+++E I+ + REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+RED Sbjct: 370 FGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 429 Query: 994 EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815 E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 430 EKITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 478 Query: 814 SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638 ++E + LY +NPNK ACE+LI +HE R DKIIVF+DNLFAL + L+K M Sbjct: 479 --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 536 Query: 637 IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458 I G TSH ER +L F+T+KT TV LSKVGD SID+PEA V+IQISS SRRQEAQR Sbjct: 537 IYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 596 Query: 457 LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290 LGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 597 LGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 654 Query: 289 DIPP 278 +PP Sbjct: 655 SLPP 658 >ref|NP_568591.1| DNA repair helicase XPB2 [Arabidopsis thaliana] gi|57013267|sp|Q9FUG4.1|XPB2_ARATH RecName: Full=DNA repair helicase XPB2; AltName: Full=ERCC3 homolog 2; AltName: Full=RAD25 homolog 2; Short=AtXPB2; AltName: Full=XPB homolog 2 gi|11037022|gb|AAG27465.1|AF308595_1 putative DNA repair protein and transcription factor [Arabidopsis thaliana] gi|47606402|gb|AAT36214.1| putative DNA repair and transcription factor XBP2 [Arabidopsis thaliana] gi|332007286|gb|AED94669.1| DNA repair helicase XPB2 [Arabidopsis thaliana] Length = 766 Score = 555 bits (1430), Expect = e-155 Identities = 300/604 (49%), Positives = 385/604 (63%), Gaps = 41/604 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ L+ LSKT++P ++ Sbjct: 83 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPGEI 142 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619 IDFI ST N GK+K LK IE+ P +K + I Sbjct: 143 IDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFTSEPYYGGDGFTI 202 Query: 1618 ------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYD 1535 E++P V V+Q+C +NYP++EEYD Sbjct: 203 GKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPALVENVKQRCLPNALNYPMLEEYD 262 Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355 ++ND P LD++L P AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R Sbjct: 263 FRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAAR 322 Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175 + K LC A +VSV+QWA QF+ W+T+ + +I TSD+K F A ++VTTY+M Sbjct: 323 IKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQICRFTSDSK-ERFRGNAGVVVTTYNMIA 381 Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995 + G RS+++E I+ + REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+RED Sbjct: 382 FGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 441 Query: 994 EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815 E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 442 EKITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 490 Query: 814 SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638 ++E + LY +NPNK ACE+LI +HE R DKIIVF+DNLFAL + L+K M Sbjct: 491 --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 548 Query: 637 IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458 I G TSH ER +L F+T+KT TV LSKVGD SID+PEA V+IQISS SRRQEAQR Sbjct: 549 IYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 608 Query: 457 LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290 LGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 609 LGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 666 Query: 289 DIPP 278 +PP Sbjct: 667 SLPP 670 >ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum] Length = 768 Score = 555 bits (1430), Expect = e-155 Identities = 300/604 (49%), Positives = 387/604 (64%), Gaps = 41/604 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ L LSKT++P ++ Sbjct: 86 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEM 145 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673 IDFI ST N GK+K LK IE+ P +K + Sbjct: 146 IDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTV 205 Query: 1672 ----------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYD 1535 H E+ E++P +V V+Q+C +NYP++EEYD Sbjct: 206 SKPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYD 265 Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355 ++ND P LD++L P+AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R Sbjct: 266 FRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 325 Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175 + K LC A +VSV+QWA QF+ W+T+ E++I TSD+K F ++VTTY+M Sbjct: 326 IKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNVGVVVTTYNMVA 384 Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995 + G RS++SE I+ I REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+RED Sbjct: 385 FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 444 Query: 994 EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815 E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 445 ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 493 Query: 814 SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638 ++E + LY +NPNK ACE+LI +HE R DKIIVF+DNLFAL + L+K M Sbjct: 494 --KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALVEYAMKLRKPM 551 Query: 637 IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458 I G TSH ER +L F+T+K T+ LSKVGD SID+PEA V+IQISS SRRQEAQR Sbjct: 552 IYGATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 611 Query: 457 LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290 LGR+LR K ++ D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 612 LGRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 669 Query: 289 DIPP 278 +PP Sbjct: 670 SLPP 673 >ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana] gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA repair helicase XPB1; AltName: Full=ERCC3 homolog 1; AltName: Full=Protein araXPB; AltName: Full=RAD25 homolog 1; Short=AtXPB1; AltName: Full=XPB homolog 1 gi|11771735|gb|AAC49987.2| putative DNA repair protein and transcription factor [Arabidopsis thaliana] gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8 [Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA repair helicase XPB1 [Arabidopsis thaliana] Length = 767 Score = 554 bits (1428), Expect = e-155 Identities = 301/604 (49%), Positives = 387/604 (64%), Gaps = 41/604 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ L+ LSKT++P ++ Sbjct: 83 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEM 142 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXV----- 1622 I+FI ST N GK+K LK IE+ P +K + I Sbjct: 143 IEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGGDGFSV 202 Query: 1621 --TC---------------------------LEMNPLKVVQVRQKC--REINYPLVEEYD 1535 TC E++P +V V+Q+C +NYP++EEYD Sbjct: 203 GRTCGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYD 262 Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355 ++ND P LD++L P AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R Sbjct: 263 FRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAAR 322 Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175 + K LC A +VSV+QWA QF+ W+T+ + +I TSD+K F A ++VTTY+M Sbjct: 323 IKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSK-ERFRGNAGVVVTTYNMVA 381 Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995 + G RS++SE I+ + REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+RED Sbjct: 382 FGGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 441 Query: 994 EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815 E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 442 ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 490 Query: 814 SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638 ++E + LY +NPNK ACE+LI +HE R DKIIVF+DNLFAL + L+K M Sbjct: 491 --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 548 Query: 637 IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458 I G TSH ER +L F+T+K TV LSKVGD SID+PEA V+IQISS SRRQEAQR Sbjct: 549 IYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 608 Query: 457 LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290 LGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 609 LGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 666 Query: 289 DIPP 278 +PP Sbjct: 667 SLPP 670 >gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 isoform 3, partial [Theobroma cacao] Length = 742 Score = 554 bits (1428), Expect = e-155 Identities = 299/604 (49%), Positives = 387/604 (64%), Gaps = 41/604 (6%) Frame = -1 Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787 Y+QAYDF IA+AEP R + HEY +T SLY AVS G+E TI+ L+ LSKT++P ++ Sbjct: 105 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEM 164 Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619 IDFI ST N GK+K LK IE+ P +K + + I Sbjct: 165 IDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTI 224 Query: 1618 ------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYD 1535 E++P +V V+Q+C +NYP++EEYD Sbjct: 225 SKAAGEIGTGHDGLLNEAELAAATEEKETHAFEIDPAQVENVKQRCLPNALNYPMLEEYD 284 Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355 ++ND P LD++L P AQ RPYQ++S+ KMF G+ARSG+IVLPCGAGKSL GV AA R Sbjct: 285 FRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 344 Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175 + K LC A +VSV+QWA QF+ W+T+ + +I TSD+K F A ++VTTY+M Sbjct: 345 IKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSK-ERFRGNAGVVVTTYNMVA 403 Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995 + G RS++SE I+ I REWGL+LMDEVHVVPA FR+ ++ T+SHCKLGLTATL+RED Sbjct: 404 FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVRED 463 Query: 994 EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815 E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF EYL Sbjct: 464 ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 512 Query: 814 SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638 ++E + LY +NPNK ACE+LI +HE R DKIIVF+DNLFAL + L+K M Sbjct: 513 --KKENSKKKQALYVMNPNKFRACEFLIRFHERERGDKIIVFADNLFALTEYAMKLRKPM 570 Query: 637 IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458 I G TSH ER +L+ F+T++ T+ LSKVGD SID+PEA V+IQISS SRRQEAQR Sbjct: 571 IYGATSHLERTKILQAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 630 Query: 457 LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290 LGR+LR K + E D ++GG+ A FYSLVS DT EM Y++KRQQFL++QGY+F T Sbjct: 631 LGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 688 Query: 289 DIPP 278 +PP Sbjct: 689 SLPP 692