BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00001905
         (1969 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001774482.1| predicted protein [Physcomitrella patens] gi...   565   e-158
ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Ci...   563   e-158
gb|ESW32085.1| hypothetical protein PHAVU_002G291500g [Phaseolus...   561   e-157
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri...   561   e-157
ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like iso...   559   e-156
ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like iso...   559   e-156
ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutr...   558   e-156
ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like iso...   558   e-156
ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like iso...   558   e-156
ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fr...   557   e-156
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...   557   e-156
ref|XP_002970284.1| hypothetical protein SELMODRAFT_147068 [Sela...   556   e-156
ref|XP_006363964.1| PREDICTED: DNA repair helicase XPB1-like [So...   556   e-155
ref|XP_002978447.1| hypothetical protein SELMODRAFT_109026 [Sela...   556   e-155
ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So...   555   e-155
dbj|BAB08508.1| DNA excision repair cross-complementing protein ...   555   e-155
ref|NP_568591.1| DNA repair helicase XPB2 [Arabidopsis thaliana]...   555   e-155
ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So...   555   e-155
ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]...   554   e-155
gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 i...   554   e-155

>ref|XP_001774482.1| predicted protein [Physcomitrella patens] gi|162674194|gb|EDQ60706.1|
            predicted protein [Physcomitrella patens]
          Length = 734

 Score =  565 bits (1455), Expect = e-158
 Identities = 304/606 (50%), Positives = 395/606 (65%), Gaps = 43/606 (7%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  LD LSKT++P ++
Sbjct: 48   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIITVLDRLSKTKLPKEI 107

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR-------------HPEIXXXXX 1646
            +DFI+ ST+N GK+K  L+     +E+  P  ++A+ R              P +     
Sbjct: 108  LDFIRGSTQNYGKVKLVLQKNRYFVESPFPEVLQALLRDDTISRARLASSEEPGVGSSSF 167

Query: 1645 XXXXXXXVT-----------------------CLEMNPLKVVQVRQKC--REINYPLVEE 1541
                    T                         E++P +V  V+Q+C    +NYP++EE
Sbjct: 168  TVSRAPHETGAADPELLGGDDAVADAEEKDIHSFEIDPSQVEHVKQRCLPNALNYPMLEE 227

Query: 1540 YDYKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAA 1361
            YD++ND   P+LDIKL P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA
Sbjct: 228  YDFRNDNVNPTLDIKLKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA 287

Query: 1360 VRLAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSM 1181
             R++K VLC A  +VSV+QWA QF+ W+T+ + +I   TSD+K   F     ++VTTY+M
Sbjct: 288  CRISKSVLCLATNAVSVDQWAFQFKLWSTVGDHQISRFTSDSK-ERFRGSVGVVVTTYNM 346

Query: 1180 YGYTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLR 1001
              + G RS++S+ I+  I+ REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+R
Sbjct: 347  VAFGGKRSEESQKIIEEIQNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVR 406

Query: 1000 EDEAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSG 821
            EDE I+DL F+IGPKLYEANW DLV+ GY+A V C E+ CPMT EF REYL         
Sbjct: 407  EDERISDLNFLIGPKLYEANWLDLVKGGYIANVQCAEVWCPMTKEFYREYL--------- 457

Query: 820  AWSRREEKRSVQHTLYSVNPNKLMACEYLINYH-ESRNDKIIVFSDNLFALEKMGTLLKK 644
               ++E  R  Q  LY +NPNK  ACE+LI +H E R DKIIVFSDNLFAL +  T L+K
Sbjct: 458  ---KKENSRKKQ-GLYVMNPNKFRACEFLIRFHEEQRGDKIIVFSDNLFALREYATKLRK 513

Query: 643  HMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEA 464
              I G TSH ER  +L  F+ +    TV LSKVGD SID+PEA V+IQISS   SRRQEA
Sbjct: 514  PFIYGPTSHHERTRILYAFKHSPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEA 573

Query: 463  QRLGRVLRPKLQSENGDGLSGG----QAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHT 296
            QRLGR+LR K   ++ D ++GG     A FYSLVS DT EM Y++KRQQFL++QGY+F  
Sbjct: 574  QRLGRILRAK--GKHKDRMAGGTEEFNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKV 631

Query: 295  STDIPP 278
             T +PP
Sbjct: 632  ITSLPP 637


>ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Cicer arietinum]
          Length = 765

 Score =  563 bits (1452), Expect = e-158
 Identities = 304/608 (50%), Positives = 390/608 (64%), Gaps = 38/608 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  L+ LSKT++P ++
Sbjct: 80   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEM 139

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673
            I FI  ST N GK+K  LK     +E+  P  +K + R                      
Sbjct: 140  IKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDGISRARITSEGMHGDGFTIT 199

Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532
                     H E+                  E++P +V  V+Q+C    +NYP++EEYD+
Sbjct: 200  KAAGEIEGTHDELLNEAEVAAAAEEKEAHAFEIDPSQVENVKQRCLPNALNYPMLEEYDF 259

Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352
            +ND   P L+++L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 260  RNDTVNPDLEMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 319

Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172
             K  LC A  +VSV+QWA QF+ W+T+ E++I   TSD+K   F   A ++VTTY+M  +
Sbjct: 320  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 378

Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992
             G RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+REDE
Sbjct: 379  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 438

Query: 991  AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812
             I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL            
Sbjct: 439  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 486

Query: 811  RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635
             ++E    +  LY +NPNK  ACE+LINYHE +R DKIIVF+DNLFAL +    L+K MI
Sbjct: 487  -KKENSKKRQALYVMNPNKFRACEFLINYHERARGDKIIVFADNLFALTEYAMKLRKPMI 545

Query: 634  RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455
             G TSH ER  +L+ F+T+K   T+ LSKVGD SID+PEA V+IQISS   SRRQEAQRL
Sbjct: 546  YGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 605

Query: 454  GRVLRP--KLQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTDIP 281
            GR+LR   KLQ     G     A FYSLVS DT EM Y++KRQQFL++QGY+F   T +P
Sbjct: 606  GRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 665

Query: 280  PLCERDRL 257
            P  E  RL
Sbjct: 666  PSDEGSRL 673


>gb|ESW32085.1| hypothetical protein PHAVU_002G291500g [Phaseolus vulgaris]
          Length = 768

 Score =  561 bits (1446), Expect = e-157
 Identities = 301/601 (50%), Positives = 387/601 (64%), Gaps = 38/601 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  T++  L+ LSKT++P ++
Sbjct: 83   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEM 142

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673
            I FI  ST N GK+K  LK     +E+  P  +K + R                      
Sbjct: 143  IKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDAISRARIISENVNGDGFTIS 202

Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532
                     H E+                  E++P +V  V+Q+C    +NYP++EEYD+
Sbjct: 203  KAAGEIEGTHDELLNEAEVAAVAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDF 262

Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352
            +ND   P LD++L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 263  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 322

Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172
             K  LC A  +VSV+QWA QF+ W+T+ E++I   TSD+K   F   A ++VTTY+M  +
Sbjct: 323  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 381

Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992
             G RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+REDE
Sbjct: 382  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 441

Query: 991  AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812
             I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL            
Sbjct: 442  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTREFFAEYL------------ 489

Query: 811  RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635
             ++E    +  LY +NPNK  ACE+LINYHE +R DKIIVF+DNLFAL +    L+K MI
Sbjct: 490  -KKENSKKRQALYVMNPNKFRACEFLINYHERARGDKIIVFADNLFALTEYAMKLRKPMI 548

Query: 634  RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455
             G TSH ER  +L+ F+T+K   T+ LSKVGD SID+PEA V+IQISS   SRRQEAQRL
Sbjct: 549  YGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 608

Query: 454  GRVLRP--KLQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTDIP 281
            GR+LR   KLQ     G     A FYSLVS DT EM Y++KRQQFL++QGY+F   T +P
Sbjct: 609  GRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 668

Query: 280  P 278
            P
Sbjct: 669  P 669


>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
            gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
            helicase, putative [Ricinus communis]
          Length = 768

 Score =  561 bits (1446), Expect = e-157
 Identities = 301/604 (49%), Positives = 391/604 (64%), Gaps = 40/604 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  L+ LSKT++P ++
Sbjct: 82   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEM 141

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619
            IDFI  ST N GK+K  LK    ++E+  P  +K + +   I             +    
Sbjct: 142  IDFIHGSTANYGKVKLVLKKNRYLVESPFPEVLKRLLKDEVISRARLVSEAHVNGSFTIS 201

Query: 1618 -----------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYDY 1532
                                           E++P +V  V+Q+C    +NYP++EEYD+
Sbjct: 202  KTAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDF 261

Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352
            +ND   P LD++L P AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 262  RNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 321

Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172
             K  LC A  +VSV+QWA QF+ W+T+ E++I   TSD+K   F   A ++VTTY+M  +
Sbjct: 322  KKSCLCLATNAVSVDQWAFQFQLWSTIREEQICRFTSDSK-ERFQGNAGVVVTTYNMVAF 380

Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992
             G RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+REDE
Sbjct: 381  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDE 440

Query: 991  AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812
             I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL            
Sbjct: 441  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 488

Query: 811  RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635
             ++E    +  LY +NPNK  ACE+LI +HE  R DKIIVF+DNLFAL +    L+K MI
Sbjct: 489  -KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMI 547

Query: 634  RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455
             G TSH ER  +L+ F+T+K   TV LSKVGD SID+PEA V+IQISS   SRRQEAQRL
Sbjct: 548  YGATSHAERTKILQAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 607

Query: 454  GRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTD 287
            GR+LR K   ++ D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T 
Sbjct: 608  GRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITS 665

Query: 286  IPPL 275
            +PPL
Sbjct: 666  LPPL 669


>ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
          Length = 769

 Score =  559 bits (1440), Expect = e-156
 Identities = 303/612 (49%), Positives = 394/612 (64%), Gaps = 40/612 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+ AYDF IA+AEP  R +  HEY +T  SLY AVS G+E  T++  L+ LSKT++P ++
Sbjct: 83   YKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVINVLNKLSKTKLPKEM 142

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673
            I FI  ST N GK+K  LK     IE+  P  +K + R                      
Sbjct: 143  IKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRLISENVNGDGFTIS 202

Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532
                     H E+                  E++P +V  V+Q+C    +NYP++EEYD+
Sbjct: 203  KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 262

Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352
            +ND   P LD++L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 263  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 322

Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172
             K  LC A  +VSV+QWA QF+ W+T+ E++I   TSD+K   F   A ++VTTY+M  +
Sbjct: 323  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 381

Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992
             G RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+REDE
Sbjct: 382  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 441

Query: 991  AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812
             I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL            
Sbjct: 442  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 489

Query: 811  RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635
             ++E    +  LY +NPNK  ACE+LIN+HE +R DKIIVF+DNLFAL +    L+K MI
Sbjct: 490  -KKENSKKRQALYVMNPNKFRACEFLINFHEGTRGDKIIVFADNLFALTEYAMKLRKPMI 548

Query: 634  RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455
             G TSH ER  +L+ F+T+K   T+ LSKVGD SID+PEA V+IQISS   SRRQEAQRL
Sbjct: 549  YGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 608

Query: 454  GRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTD 287
            GR+LR K + E  D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T 
Sbjct: 609  GRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITS 666

Query: 286  IPPLCERDRLCF 251
            +PP  E   L +
Sbjct: 667  LPPPDEGPNLSY 678


>ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
          Length = 768

 Score =  559 bits (1440), Expect = e-156
 Identities = 303/612 (49%), Positives = 394/612 (64%), Gaps = 40/612 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+ AYDF IA+AEP  R +  HEY +T  SLY AVS G+E  T++  L+ LSKT++P ++
Sbjct: 82   YKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVINVLNKLSKTKLPKEM 141

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673
            I FI  ST N GK+K  LK     IE+  P  +K + R                      
Sbjct: 142  IKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRLISENVNGDGFTIS 201

Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532
                     H E+                  E++P +V  V+Q+C    +NYP++EEYD+
Sbjct: 202  KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 261

Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352
            +ND   P LD++L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 262  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 321

Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172
             K  LC A  +VSV+QWA QF+ W+T+ E++I   TSD+K   F   A ++VTTY+M  +
Sbjct: 322  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 380

Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992
             G RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+REDE
Sbjct: 381  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 440

Query: 991  AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812
             I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL            
Sbjct: 441  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 488

Query: 811  RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635
             ++E    +  LY +NPNK  ACE+LIN+HE +R DKIIVF+DNLFAL +    L+K MI
Sbjct: 489  -KKENSKKRQALYVMNPNKFRACEFLINFHEGTRGDKIIVFADNLFALTEYAMKLRKPMI 547

Query: 634  RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455
             G TSH ER  +L+ F+T+K   T+ LSKVGD SID+PEA V+IQISS   SRRQEAQRL
Sbjct: 548  YGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 607

Query: 454  GRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTD 287
            GR+LR K + E  D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T 
Sbjct: 608  GRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITS 665

Query: 286  IPPLCERDRLCF 251
            +PP  E   L +
Sbjct: 666  LPPPDEGPNLSY 677


>ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutrema salsugineum]
            gi|557106496|gb|ESQ46811.1| hypothetical protein
            EUTSA_v10027651mg [Eutrema salsugineum]
          Length = 769

 Score =  558 bits (1439), Expect = e-156
 Identities = 303/604 (50%), Positives = 388/604 (64%), Gaps = 41/604 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  L+ LSKT++P ++
Sbjct: 84   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEM 143

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619
            IDFI  ST N GK+K  LK     IE+  P  +K +     I                  
Sbjct: 144  IDFIYASTANYGKVKLVLKKNRYFIESPFPEVLKTLLSDGVISRARFSSEPYYGGDGFTV 203

Query: 1618 ------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYD 1535
                                            E++P +V  V+Q+C   E+NYP++EEYD
Sbjct: 204  GKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPAQVENVKQRCLPSELNYPMLEEYD 263

Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355
            ++ND   P LDI+L P AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 264  FRNDNVNPDLDIELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAAR 323

Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175
            + K VLC A  +VSV+QWA QF+ W+T+ + +I   TSD+K  +F   A ++VTTY+M  
Sbjct: 324  IKKSVLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSK-EKFRGNAGVVVTTYNMVA 382

Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995
            + G RS+DS+ I+  +  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+RED
Sbjct: 383  FGGKRSEDSQMIIEDMRNREWGLLLMDEVHVVPANMFRKVISITKSHCKLGLTATLVRED 442

Query: 994  EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815
            E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL           
Sbjct: 443  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 491

Query: 814  SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638
              ++E    +  LY +NPNK  ACE+LI +HE  R DKIIVF+DNLFAL +    L+K M
Sbjct: 492  --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 549

Query: 637  IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458
            I G TSH ER  +L  F+T+K   TV LSKVGD SID+PEA V+IQISS   SRRQEAQR
Sbjct: 550  IYGATSHIERTKILEAFKTSKDLNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 609

Query: 457  LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290
            LGR+LR K + E  D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T
Sbjct: 610  LGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 667

Query: 289  DIPP 278
             +PP
Sbjct: 668  SLPP 671


>ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
          Length = 769

 Score =  558 bits (1438), Expect = e-156
 Identities = 302/612 (49%), Positives = 394/612 (64%), Gaps = 40/612 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+ AYDF IA+AEP  R +  HEY +T  SLY AVS G+E  T++  L+ LSKT++P ++
Sbjct: 83   YKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEM 142

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673
            + FI  ST N GK+K  LK     IE+  P  +K + R                      
Sbjct: 143  VKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRIISENVNGDGFTIS 202

Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532
                     H E+                  E++P +V  V+Q+C    +NYP++EEYD+
Sbjct: 203  KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 262

Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352
            +ND   P LD++L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 263  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 322

Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172
             K  LC A  +VSV+QWA QF+ W+T+ E++I   TSD+K   F   A ++VTTY+M  +
Sbjct: 323  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 381

Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992
             G RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+REDE
Sbjct: 382  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 441

Query: 991  AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812
             I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL            
Sbjct: 442  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 489

Query: 811  RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635
             ++E    +  LY +NPNK  ACE+LIN+HE +R DKIIVF+DNLFAL +    L+K MI
Sbjct: 490  -KKENSKKRQALYVMNPNKFRACEFLINFHERTRGDKIIVFADNLFALTEYAMKLRKPMI 548

Query: 634  RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455
             G TSH ER  +L+ F+T+K   T+ LSKVGD SID+PEA V+IQISS   SRRQEAQRL
Sbjct: 549  YGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 608

Query: 454  GRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTD 287
            GR+LR K + E  D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T 
Sbjct: 609  GRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITS 666

Query: 286  IPPLCERDRLCF 251
            +PP  E   L +
Sbjct: 667  LPPPDEGPNLSY 678


>ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
          Length = 768

 Score =  558 bits (1438), Expect = e-156
 Identities = 302/612 (49%), Positives = 394/612 (64%), Gaps = 40/612 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+ AYDF IA+AEP  R +  HEY +T  SLY AVS G+E  T++  L+ LSKT++P ++
Sbjct: 82   YKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEM 141

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673
            + FI  ST N GK+K  LK     IE+  P  +K + R                      
Sbjct: 142  VKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRIISENVNGDGFTIS 201

Query: 1672 ---------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYDY 1532
                     H E+                  E++P +V  V+Q+C    +NYP++EEYD+
Sbjct: 202  KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 261

Query: 1531 KNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRL 1352
            +ND   P LD++L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 262  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 321

Query: 1351 AKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGY 1172
             K  LC A  +VSV+QWA QF+ W+T+ E++I   TSD+K   F   A ++VTTY+M  +
Sbjct: 322  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNAGVVVTTYNMVAF 380

Query: 1171 TGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDE 992
             G RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+REDE
Sbjct: 381  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 440

Query: 991  AINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWS 812
             I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL            
Sbjct: 441  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 488

Query: 811  RREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMI 635
             ++E    +  LY +NPNK  ACE+LIN+HE +R DKIIVF+DNLFAL +    L+K MI
Sbjct: 489  -KKENSKKRQALYVMNPNKFRACEFLINFHERTRGDKIIVFADNLFALTEYAMKLRKPMI 547

Query: 634  RGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 455
             G TSH ER  +L+ F+T+K   T+ LSKVGD SID+PEA V+IQISS   SRRQEAQRL
Sbjct: 548  YGATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 607

Query: 454  GRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTD 287
            GR+LR K + E  D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T 
Sbjct: 608  GRILRAKGKLE--DRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITS 665

Query: 286  IPPLCERDRLCF 251
            +PP  E   L +
Sbjct: 666  LPPPDEGPNLSY 677


>ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fragaria vesca subsp.
            vesca]
          Length = 768

 Score =  557 bits (1435), Expect = e-156
 Identities = 300/602 (49%), Positives = 384/602 (63%), Gaps = 39/602 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  LD LSKT++P ++
Sbjct: 82   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETQTIISVLDKLSKTKLPKEM 141

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619
            IDFI  ST N GK+K  LK     +E+  P  +K + R   I                  
Sbjct: 142  IDFIHGSTANYGKVKLVLKKNRYYVESPFPEVLKKLLRDDVISKARIVSEAANEKGGFTI 201

Query: 1618 ------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYD 1535
                                            E++P +V +V+++C    +NYP++EEYD
Sbjct: 202  SKTLGEIAADSSGLLNEAELAAAAEEKETHAFEIDPSQVEKVKERCLPNALNYPMLEEYD 261

Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355
            ++ND   P LD++L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 262  FRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 321

Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175
            + K  LC A  +VSV+QWA QF+ W+T+ ++ I   TSD+K   F   A ++VTTY+M  
Sbjct: 322  IKKSCLCLATNAVSVDQWAFQFKLWSTIRDEHICRFTSDSK-ERFRGNAGVVVTTYNMVA 380

Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995
            + G RS++SE I+  I  REWGL+LMDEVHVVPA+ FR+ +A T+SHCKLGLTATL+RED
Sbjct: 381  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAQMFRKVIAITKSHCKLGLTATLVRED 440

Query: 994  EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815
            E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL           
Sbjct: 441  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 489

Query: 814  SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638
              ++E    +  LY +NPNK  ACE+LI +HE  R DKIIVF+DNLFAL +    L+K M
Sbjct: 490  --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 547

Query: 637  IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458
            I G TSH ER  +L  F+T+K   TV LSKVGD SID+PEA V+IQISS   SRRQEAQR
Sbjct: 548  IYGATSHVERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 607

Query: 457  LGRVLRP--KLQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTDI 284
            LGR+LR   KL+     G     A FYSLVS DT EM Y++KRQQFL++QGY+F   T +
Sbjct: 608  LGRILRAKGKLRDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSL 667

Query: 283  PP 278
            PP
Sbjct: 668  PP 669


>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score =  557 bits (1435), Expect = e-156
 Identities = 300/602 (49%), Positives = 383/602 (63%), Gaps = 39/602 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  L  LSKT++P ++
Sbjct: 84   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEM 143

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAI------------------------ 1679
            IDFI  ST N GK+K  LK     +E+  P  +K +                        
Sbjct: 144  IDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRSRISHEGSTGNDGFTI 203

Query: 1678 --------ARHPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYD 1535
                     RH E+                  E++P +V  V+Q+C    +NYP++EEYD
Sbjct: 204  SKTVGEIEGRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNALNYPMLEEYD 263

Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355
            ++ND   P LD++L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 264  FRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR 323

Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175
            + K  LC A  +VSV+QWA QF+ W+T+ +++I   TSD+K   F   A ++VTTY+M  
Sbjct: 324  IRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSK-ERFRGNAGVVVTTYNMVA 382

Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995
            + G RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+RED
Sbjct: 383  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 442

Query: 994  EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815
            E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL           
Sbjct: 443  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 491

Query: 814  SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638
              ++E    +  LY +NPNK  ACE+LI +HE  R DKIIVF+DNLFAL +    L+K M
Sbjct: 492  --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 549

Query: 637  IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458
            I G TSH ER  +L  F+T K   T+ LSKVGD SID+PEA V+IQISS   SRRQEAQR
Sbjct: 550  IYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 609

Query: 457  LGRVLRPK--LQSENGDGLSGGQAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTDI 284
            LGR+LR K  LQ     G     A FYSLVS DT EM Y++KRQQFL++QGY+F   T +
Sbjct: 610  LGRILRAKGRLQDRLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSL 669

Query: 283  PP 278
            PP
Sbjct: 670  PP 671


>ref|XP_002970284.1| hypothetical protein SELMODRAFT_147068 [Selaginella moellendorffii]
            gi|300161800|gb|EFJ28414.1| hypothetical protein
            SELMODRAFT_147068 [Selaginella moellendorffii]
          Length = 713

 Score =  556 bits (1434), Expect = e-156
 Identities = 296/601 (49%), Positives = 387/601 (64%), Gaps = 38/601 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +H HEY +T  SLY AVS G+E  T++  L+ LSK ++P ++
Sbjct: 34   YKQAYDFLIAIAEPVCRPEHMHEYNLTPHSLYAAVSVGLETQTVITVLERLSKARLPQEI 93

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXV----- 1622
            ++FIK+ST N GK+K  L+     +E+S P  ++ + +   I                  
Sbjct: 94   VNFIKESTLNYGKVKLVLQKNRYFVESSYPEILERVLKDDVISRARIFSEASAEHGFTVN 153

Query: 1621 --------------------------TCLEMNPLKVVQVRQKC--REINYPLVEEYDYKN 1526
                                         E++P +V  V+Q+C    +NYP++EEYD++N
Sbjct: 154  KSLSNATTEQDLLAGDEVAAGEEKDVMSFEIDPAQVEHVKQRCLPSALNYPMLEEYDFRN 213

Query: 1525 DGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVRLAK 1346
            D   P L I+L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R+ K
Sbjct: 214  DSVNPDLSIELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRK 273

Query: 1345 PVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYGYTG 1166
              LC A  +VSV+QWA QF+ W+T+ + +I   TSD+K  +F     ++VTTY+M  + G
Sbjct: 274  SCLCLATNAVSVDQWAFQFKLWSTIRDDQISRFTSDSK-DKFKSNVGVVVTTYNMVAFKG 332

Query: 1165 HRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLREDEAI 986
             RS++SE ++  I+ REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+REDE I
Sbjct: 333  KRSEESEKVIELIKSREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERI 392

Query: 985  NDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAWSRR 806
             DL F+IGPKLYEANW DLV+ GY+A V C E+ CPMT EF  EYL            ++
Sbjct: 393  TDLNFLIGPKLYEANWLDLVKGGYIANVQCAEVWCPMTKEFYAEYL------------KK 440

Query: 805  EEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHMIRG 629
            E ++  Q  LY +NPNK  ACE+LI +HE  R DKIIVFSDNLFAL +  T LK+  I G
Sbjct: 441  ENRK--QQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFSDNLFALREYATKLKRPFIYG 498

Query: 628  DTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLGR 449
             TSH ER  +L  F+ +    TV LSKVGD SID+PEA V+IQISS   SRRQEAQRLGR
Sbjct: 499  PTSHHERTKILYAFKHSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGR 558

Query: 448  VLRPKLQSENGDGLSGG----QAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTSTDIP 281
            +LR K   +  D + GG     A FYSLVS DT EM Y+SKRQQFL++QGY+F   T +P
Sbjct: 559  ILRAK--GKPKDRVKGGTEEFNAFFYSLVSTDTQEMYYSSKRQQFLIDQGYSFKVLTSLP 616

Query: 280  P 278
            P
Sbjct: 617  P 617


>ref|XP_006363964.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
          Length = 728

 Score =  556 bits (1433), Expect = e-155
 Identities = 293/569 (51%), Positives = 378/569 (66%), Gaps = 6/569 (1%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y QA DF IA+AEP SR    HEY +T  SLY AVS  ++  TI+  L+ LSKT +P +V
Sbjct: 69   YHQASDFLIAIAEPVSRPNSIHEYNLTPHSLYAAVSVSLQTHTIISVLNKLSKTNLPKEV 128

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT--CL 1613
            +DFI+ ST N GK+K  LK     IE+  P  +K + +   I                  
Sbjct: 129  VDFIQSSTSNYGKVKLVLKKNRYFIESPCPLVLKTLLKDDVISRARIANTIEEEEAEYSF 188

Query: 1612 EMNPLKVVQVRQKC--REINYPLVEEYDYKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMF 1439
            E++P +V  V+Q+C    +NYP++EEYD++ND   P LDI+L   AQ RPYQ +S+ KMF
Sbjct: 189  EIDPAQVESVKQRCLPNALNYPMLEEYDFRNDTVNPDLDIELKINAQPRPYQVKSLSKMF 248

Query: 1438 VRGKARSGVIVLPCGAGKSLTGVYAAVRLAKPVLCFANTSVSVEQWASQFRHWTTLPEKK 1259
              G+ARSG+IVLPCGAGKSL GV AA R+ K  LC A  +VSV+QWA QFR W+T+ + +
Sbjct: 249  GNGRARSGIIVLPCGAGKSLVGVSAATRINKSCLCLATNAVSVDQWAYQFRLWSTIRDDQ 308

Query: 1258 IQTVTSDTKASEFDPKADIMVTTYSMYGYTGHRSKDSESIMGAIEGREWGLILMDEVHVV 1079
            I   T+D+K  +F   A ++VTTY+M  + G RS++SE ++  I  REWGL+L+DEVHVV
Sbjct: 309  ICRFTTDSK-EQFRGDAGVVVTTYNMVAFGGKRSEESEKLIEQIRNREWGLLLLDEVHVV 367

Query: 1078 PAKNFREAVARTRSHCKLGLTATLLREDEAINDLEFIIGPKLYEANWQDLVQAGYLATVT 899
            PA+ FR+ ++ T+SHCKLGLTATL+REDE I DL F+IGPKLYEANW DL + G++A V 
Sbjct: 368  PAQMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWSDLAKGGFIANVQ 427

Query: 898  CFEILCPMTSEFLREYLNLFLHNNSGAWSRREEKRSVQHTLYSVNPNKLMACEYLINYHE 719
            C E+ CPMT EF  EYL             ++E    +  LY +NPNK  ACE+LI +HE
Sbjct: 428  CAEVWCPMTKEFFAEYL-------------KQENHRKRKALYVMNPNKFRACEFLIRFHE 474

Query: 718  -SRNDKIIVFSDNLFALEKMGTLLKKHMIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVG 542
              R+DKIIVFSDNLFAL +    L+K MI G TSH ER+ +L  FRT     T+ LSKVG
Sbjct: 475  QQRDDKIIVFSDNLFALTEYSMRLRKPMIYGCTSHAERMKILEAFRTNPEVNTIFLSKVG 534

Query: 541  DTSIDLPEATVVIQISSQGASRRQEAQRLGRVLRPK-LQSENGDGLSGGQAIFYSLVSQD 365
            D SID+PEA V+IQISS   SRRQEAQRLGR+LR K  + + G       A FYSLVS D
Sbjct: 535  DNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKRARLQGGSKTEEYDAFFYSLVSTD 594

Query: 364  TAEMLYASKRQQFLVNQGYTFHTSTDIPP 278
            T EM Y++KRQQFL++QGY+F   T++PP
Sbjct: 595  TQEMYYSTKRQQFLIDQGYSFKVITNLPP 623


>ref|XP_002978447.1| hypothetical protein SELMODRAFT_109026 [Selaginella moellendorffii]
            gi|300153796|gb|EFJ20433.1| hypothetical protein
            SELMODRAFT_109026 [Selaginella moellendorffii]
          Length = 733

 Score =  556 bits (1432), Expect = e-155
 Identities = 296/605 (48%), Positives = 388/605 (64%), Gaps = 42/605 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +H HEY +T  SLY AVS G+E  T++  L+ LSK ++P ++
Sbjct: 50   YKQAYDFLIAIAEPVCRPEHMHEYNLTPHSLYAAVSVGLETQTVITVLERLSKARLPQEI 109

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619
            ++FIK+ST N GK+K  L+     +E+S P  ++ + +   I             +    
Sbjct: 110  VNFIKESTLNYGKVKLVLQKNRYFVESSYPEILERVLKDDVISRARIFSEACESFSFNHG 169

Query: 1618 -------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEY 1538
                                             E++P +V  V+Q+C    +NYP++EEY
Sbjct: 170  FTVNKSLSNATTEQDLLAGDEVAAGEEKDVMSFEIDPAQVEHVKQRCLPSALNYPMLEEY 229

Query: 1537 DYKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAV 1358
            D++ND   P L I+L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA 
Sbjct: 230  DFRNDSVNPDLSIELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 289

Query: 1357 RLAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMY 1178
            R+ K  LC A  +VSV+QWA QF+ W+T+ + +I   TSD+K  +F     ++VTTY+M 
Sbjct: 290  RIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQISRFTSDSK-DKFKSNVGVVVTTYNMV 348

Query: 1177 GYTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRE 998
             + G RS++SE ++  I+ REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+RE
Sbjct: 349  AFKGKRSEESEKVIELIKSREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRE 408

Query: 997  DEAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGA 818
            DE I DL F+IGPKLYEANW DLV+ GY+A V C E+ CPMT EF  EYL          
Sbjct: 409  DERITDLNFLIGPKLYEANWLDLVKGGYIANVQCAEVWCPMTKEFYAEYL---------- 458

Query: 817  WSRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKH 641
              ++E ++  Q  LY +NPNK  ACE+LI +HE  R DKIIVFSDNLFAL +  T LK+ 
Sbjct: 459  --KKENRK--QQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFSDNLFALREYATKLKRP 514

Query: 640  MIRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQ 461
             I G TSH ER  +L  F+ +    TV LSKVGD SID+PEA V+IQISS   SRRQEAQ
Sbjct: 515  FIYGPTSHHERTKILYAFKHSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQ 574

Query: 460  RLGRVLRPKLQSENGDGLSGG----QAIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTS 293
            RLGR+LR K   +  D + GG     A FYSLVS DT EM Y+SKRQQFL++QGY+F   
Sbjct: 575  RLGRILRAK--GKPKDRVKGGTEEFNAFFYSLVSTDTQEMYYSSKRQQFLIDQGYSFKVL 632

Query: 292  TDIPP 278
            T +PP
Sbjct: 633  TSLPP 637


>ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum]
          Length = 768

 Score =  555 bits (1431), Expect = e-155
 Identities = 300/604 (49%), Positives = 387/604 (64%), Gaps = 41/604 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  L  LSKT++P ++
Sbjct: 86   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEM 145

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673
            IDFI  ST N GK+K  LK     IE+  P  +K +                        
Sbjct: 146  IDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTV 205

Query: 1672 ----------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYD 1535
                      H E+                  E++P +V  V+Q+C    +NYP++EEYD
Sbjct: 206  SKPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYD 265

Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355
            ++ND   P LD++L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 266  FRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 325

Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175
            + K  LC A  +VSV+QWA QF+ W+T+ E++I   TSD+K   F     ++VTTY+M  
Sbjct: 326  IKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNVGVVVTTYNMVA 384

Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995
            + G RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+RED
Sbjct: 385  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 444

Query: 994  EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815
            E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL           
Sbjct: 445  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 493

Query: 814  SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638
              ++E    +  LY +NPNK  ACE+LI +HE  R DKIIVF+DNLFAL +    L+K M
Sbjct: 494  --KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 551

Query: 637  IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458
            I G TSH ER  +L  F+T+K   T+ LSKVGD SID+PEA V+IQISS   SRRQEAQR
Sbjct: 552  IYGATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 611

Query: 457  LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290
            LGR+LR K   ++ D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T
Sbjct: 612  LGRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 669

Query: 289  DIPP 278
             +PP
Sbjct: 670  SLPP 673


>dbj|BAB08508.1| DNA excision repair cross-complementing protein [Arabidopsis
            thaliana]
          Length = 754

 Score =  555 bits (1430), Expect = e-155
 Identities = 300/604 (49%), Positives = 385/604 (63%), Gaps = 41/604 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  L+ LSKT++P ++
Sbjct: 71   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPGEI 130

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619
            IDFI  ST N GK+K  LK     IE+  P  +K +     I                  
Sbjct: 131  IDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFTSEPYYGGDGFTI 190

Query: 1618 ------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYD 1535
                                            E++P  V  V+Q+C    +NYP++EEYD
Sbjct: 191  GKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPALVENVKQRCLPNALNYPMLEEYD 250

Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355
            ++ND   P LD++L P AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 251  FRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAAR 310

Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175
            + K  LC A  +VSV+QWA QF+ W+T+ + +I   TSD+K   F   A ++VTTY+M  
Sbjct: 311  IKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQICRFTSDSK-ERFRGNAGVVVTTYNMIA 369

Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995
            + G RS+++E I+  +  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+RED
Sbjct: 370  FGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 429

Query: 994  EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815
            E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL           
Sbjct: 430  EKITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 478

Query: 814  SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638
              ++E    +  LY +NPNK  ACE+LI +HE  R DKIIVF+DNLFAL +    L+K M
Sbjct: 479  --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 536

Query: 637  IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458
            I G TSH ER  +L  F+T+KT  TV LSKVGD SID+PEA V+IQISS   SRRQEAQR
Sbjct: 537  IYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 596

Query: 457  LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290
            LGR+LR K + E  D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T
Sbjct: 597  LGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 654

Query: 289  DIPP 278
             +PP
Sbjct: 655  SLPP 658


>ref|NP_568591.1| DNA repair helicase XPB2 [Arabidopsis thaliana]
            gi|57013267|sp|Q9FUG4.1|XPB2_ARATH RecName: Full=DNA
            repair helicase XPB2; AltName: Full=ERCC3 homolog 2;
            AltName: Full=RAD25 homolog 2; Short=AtXPB2; AltName:
            Full=XPB homolog 2 gi|11037022|gb|AAG27465.1|AF308595_1
            putative DNA repair protein and transcription factor
            [Arabidopsis thaliana] gi|47606402|gb|AAT36214.1|
            putative DNA repair and transcription factor XBP2
            [Arabidopsis thaliana] gi|332007286|gb|AED94669.1| DNA
            repair helicase XPB2 [Arabidopsis thaliana]
          Length = 766

 Score =  555 bits (1430), Expect = e-155
 Identities = 300/604 (49%), Positives = 385/604 (63%), Gaps = 41/604 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  L+ LSKT++P ++
Sbjct: 83   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPGEI 142

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619
            IDFI  ST N GK+K  LK     IE+  P  +K +     I                  
Sbjct: 143  IDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFTSEPYYGGDGFTI 202

Query: 1618 ------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYD 1535
                                            E++P  V  V+Q+C    +NYP++EEYD
Sbjct: 203  GKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPALVENVKQRCLPNALNYPMLEEYD 262

Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355
            ++ND   P LD++L P AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 263  FRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAAR 322

Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175
            + K  LC A  +VSV+QWA QF+ W+T+ + +I   TSD+K   F   A ++VTTY+M  
Sbjct: 323  IKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQICRFTSDSK-ERFRGNAGVVVTTYNMIA 381

Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995
            + G RS+++E I+  +  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+RED
Sbjct: 382  FGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 441

Query: 994  EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815
            E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL           
Sbjct: 442  EKITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 490

Query: 814  SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638
              ++E    +  LY +NPNK  ACE+LI +HE  R DKIIVF+DNLFAL +    L+K M
Sbjct: 491  --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 548

Query: 637  IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458
            I G TSH ER  +L  F+T+KT  TV LSKVGD SID+PEA V+IQISS   SRRQEAQR
Sbjct: 549  IYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 608

Query: 457  LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290
            LGR+LR K + E  D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T
Sbjct: 609  LGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 666

Query: 289  DIPP 278
             +PP
Sbjct: 667  SLPP 670


>ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
          Length = 768

 Score =  555 bits (1430), Expect = e-155
 Identities = 300/604 (49%), Positives = 387/604 (64%), Gaps = 41/604 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  L  LSKT++P ++
Sbjct: 86   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEM 145

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIAR---------------------- 1673
            IDFI  ST N GK+K  LK     IE+  P  +K +                        
Sbjct: 146  IDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTV 205

Query: 1672 ----------HPEIXXXXXXXXXXXXVTC--LEMNPLKVVQVRQKC--REINYPLVEEYD 1535
                      H E+                  E++P +V  V+Q+C    +NYP++EEYD
Sbjct: 206  SKPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYD 265

Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355
            ++ND   P LD++L P+AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 266  FRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 325

Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175
            + K  LC A  +VSV+QWA QF+ W+T+ E++I   TSD+K   F     ++VTTY+M  
Sbjct: 326  IKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSK-ERFRGNVGVVVTTYNMVA 384

Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995
            + G RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+RED
Sbjct: 385  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 444

Query: 994  EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815
            E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL           
Sbjct: 445  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 493

Query: 814  SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638
              ++E    +  LY +NPNK  ACE+LI +HE  R DKIIVF+DNLFAL +    L+K M
Sbjct: 494  --KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALVEYAMKLRKPM 551

Query: 637  IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458
            I G TSH ER  +L  F+T+K   T+ LSKVGD SID+PEA V+IQISS   SRRQEAQR
Sbjct: 552  IYGATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 611

Query: 457  LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290
            LGR+LR K   ++ D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T
Sbjct: 612  LGRILRAK--GKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 669

Query: 289  DIPP 278
             +PP
Sbjct: 670  SLPP 673


>ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
            gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA
            repair helicase XPB1; AltName: Full=ERCC3 homolog 1;
            AltName: Full=Protein araXPB; AltName: Full=RAD25 homolog
            1; Short=AtXPB1; AltName: Full=XPB homolog 1
            gi|11771735|gb|AAC49987.2| putative DNA repair protein
            and transcription factor [Arabidopsis thaliana]
            gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis
            thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8
            [Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA
            repair helicase XPB1 [Arabidopsis thaliana]
          Length = 767

 Score =  554 bits (1428), Expect = e-155
 Identities = 301/604 (49%), Positives = 387/604 (64%), Gaps = 41/604 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  L+ LSKT++P ++
Sbjct: 83   YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEM 142

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXV----- 1622
            I+FI  ST N GK+K  LK     IE+  P  +K +     I                  
Sbjct: 143  IEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGGDGFSV 202

Query: 1621 --TC---------------------------LEMNPLKVVQVRQKC--REINYPLVEEYD 1535
              TC                            E++P +V  V+Q+C    +NYP++EEYD
Sbjct: 203  GRTCGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYD 262

Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355
            ++ND   P LD++L P AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 263  FRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAAR 322

Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175
            + K  LC A  +VSV+QWA QF+ W+T+ + +I   TSD+K   F   A ++VTTY+M  
Sbjct: 323  IKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSK-ERFRGNAGVVVTTYNMVA 381

Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995
            + G RS++SE I+  +  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+RED
Sbjct: 382  FGGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 441

Query: 994  EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815
            E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL           
Sbjct: 442  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 490

Query: 814  SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638
              ++E    +  LY +NPNK  ACE+LI +HE  R DKIIVF+DNLFAL +    L+K M
Sbjct: 491  --KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPM 548

Query: 637  IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458
            I G TSH ER  +L  F+T+K   TV LSKVGD SID+PEA V+IQISS   SRRQEAQR
Sbjct: 549  IYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 608

Query: 457  LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290
            LGR+LR K + E  D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T
Sbjct: 609  LGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 666

Query: 289  DIPP 278
             +PP
Sbjct: 667  SLPP 670


>gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 isoform 3, partial
            [Theobroma cacao]
          Length = 742

 Score =  554 bits (1428), Expect = e-155
 Identities = 299/604 (49%), Positives = 387/604 (64%), Gaps = 41/604 (6%)
 Frame = -1

Query: 1966 YRQAYDFCIAVAEPESRLQHFHEYKITCASLYGAVSAGMEAATILRFLDLLSKTQIPDKV 1787
            Y+QAYDF IA+AEP  R +  HEY +T  SLY AVS G+E  TI+  L+ LSKT++P ++
Sbjct: 105  YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEM 164

Query: 1786 IDFIKKSTENVGKLKFYLKNGSMIIEASEPAAIKAIARHPEIXXXXXXXXXXXXVT---- 1619
            IDFI  ST N GK+K  LK     IE+  P  +K + +   I                  
Sbjct: 165  IDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTI 224

Query: 1618 ------------------------------CLEMNPLKVVQVRQKC--REINYPLVEEYD 1535
                                            E++P +V  V+Q+C    +NYP++EEYD
Sbjct: 225  SKAAGEIGTGHDGLLNEAELAAATEEKETHAFEIDPAQVENVKQRCLPNALNYPMLEEYD 284

Query: 1534 YKNDGSCPSLDIKLSPKAQLRPYQKRSVDKMFVRGKARSGVIVLPCGAGKSLTGVYAAVR 1355
            ++ND   P LD++L P AQ RPYQ++S+ KMF  G+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 285  FRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 344

Query: 1354 LAKPVLCFANTSVSVEQWASQFRHWTTLPEKKIQTVTSDTKASEFDPKADIMVTTYSMYG 1175
            + K  LC A  +VSV+QWA QF+ W+T+ + +I   TSD+K   F   A ++VTTY+M  
Sbjct: 345  IKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSK-ERFRGNAGVVVTTYNMVA 403

Query: 1174 YTGHRSKDSESIMGAIEGREWGLILMDEVHVVPAKNFREAVARTRSHCKLGLTATLLRED 995
            + G RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ T+SHCKLGLTATL+RED
Sbjct: 404  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVRED 463

Query: 994  EAINDLEFIIGPKLYEANWQDLVQAGYLATVTCFEILCPMTSEFLREYLNLFLHNNSGAW 815
            E I DL F+IGPKLYEANW DLV+ G++A V C E+ CPMT EF  EYL           
Sbjct: 464  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 512

Query: 814  SRREEKRSVQHTLYSVNPNKLMACEYLINYHE-SRNDKIIVFSDNLFALEKMGTLLKKHM 638
              ++E    +  LY +NPNK  ACE+LI +HE  R DKIIVF+DNLFAL +    L+K M
Sbjct: 513  --KKENSKKKQALYVMNPNKFRACEFLIRFHERERGDKIIVFADNLFALTEYAMKLRKPM 570

Query: 637  IRGDTSHQERLDVLRKFRTAKTGFTVLLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 458
            I G TSH ER  +L+ F+T++   T+ LSKVGD SID+PEA V+IQISS   SRRQEAQR
Sbjct: 571  IYGATSHLERTKILQAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 630

Query: 457  LGRVLRPKLQSENGDGLSGGQ----AIFYSLVSQDTAEMLYASKRQQFLVNQGYTFHTST 290
            LGR+LR K + E  D ++GG+    A FYSLVS DT EM Y++KRQQFL++QGY+F   T
Sbjct: 631  LGRILRAKGKLE--DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 688

Query: 289  DIPP 278
             +PP
Sbjct: 689  SLPP 692