BLASTX nr result

ID: Ephedra27_contig00001837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00001837
         (2328 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75970.1| unknown [Picea sitchensis]                             142   8e-31

>gb|ADE75970.1| unknown [Picea sitchensis]
          Length = 294

 Score =  142 bits (357), Expect = 8e-31
 Identities = 107/267 (40%), Positives = 134/267 (50%), Gaps = 30/267 (11%)
 Frame = -3

Query: 1060 NGGLNFGVQSNRGNGM-----NIENVINFDRAEDEFINFRNPNESEMGFVNANDMHFSVK 896
            +GG+N   QS R  GM     NIEN               N N + +G +NA+       
Sbjct: 23   SGGMNCASQSGREAGMVFGGQNIENGTGIQDGGRSGGIVNNRNSTGIGRLNAS------- 75

Query: 895  ESPPVMYIENGSSQNFCGRXXXXXXXXXXXSVHISDEDRTHDLIGMQS----------MV 746
                       S+ N               S HISDE+RT DLIGMQS          M+
Sbjct: 76   ---------TSSAGNH-----------KVNSAHISDEERTVDLIGMQSQNLQNPVTLSMM 115

Query: 745  WSNSNQNSRAINHAISPHASLHDFNNYDVKV----GNTGAYRGLMQSNSSFENGMEMLNS 578
            WSN  Q+ R +N  IS H++LH FN YD+      G TG YRGL+ S++++EN + M+N 
Sbjct: 116  WSNVTQSPRGLNQNIS-HSALHGFN-YDIHTKLGSGTTGTYRGLVHSSAAYENNLGMMNQ 173

Query: 577  TSI----PRVGTSSSSNVMNAPAPHL-----PSFMGLQNQDPMQGFSGMQNFLELSMNGN 425
              +    P +G      + NA + +L      S MG+QNQ PMQ FSGMQNFL LS NGN
Sbjct: 174  PVMQPANPTMGMQLPMGMQNATSNNLNTSGMSSLMGMQNQVPMQNFSGMQNFLGLSTNGN 233

Query: 424  MGAIPQEG--RQVFTGLYLNECRQHAA 350
            MG  P EG  RQVF GLYLNE   HAA
Sbjct: 234  MGPTPAEGIRRQVFPGLYLNERPPHAA 260


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