BLASTX nr result

ID: Ephedra27_contig00001830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00001830
         (1003 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              67   1e-08

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 2/265 (0%)
 Frame = -1

Query: 793 IEELVRFLDHTIEAIRRGAEDQTAAPNTGEKAVESVDSCIKFASSFLDKVDTEVRTLKDT 614
           ++EL++ +   +E I+   + ++A P   ++ + + +S  K    FL +    V+     
Sbjct: 91  LDELIKHISELLEHIQEAGK-KSALPKAVQRYLPASESFSKL-KEFLSEATNFVK----- 143

Query: 613 DWAKGLGDTALR-MANTVGNAHWILLGLSVVSFTLQTWQAARANVKECVDVLQEMVDLAK 437
           D   G   T +R +   +G AH    GL VV+  L+ ++    N  EC  VL+EM+ LAK
Sbjct: 144 DIIPGDAKTIVRGLLQGMGTAHLATTGLLVVANILERFEDVSDNQDECFHVLKEMIFLAK 203

Query: 436 HIRAVLPVLSSDTERGKECEDMLKRAIRLIVQAALXXXXXXXXXXXXKILLANRMKEDLQ 257
            ++ +        +  +   D +K A  LIV+ ++                 +  KE+L 
Sbjct: 204 VVKQI----KERPQLQQRMHDEVKDATELIVEGSIKCCSQMASSQFSNFFSTSVNKEELG 259

Query: 256 NIHSDVQSLKTDLIALNTTHLISNTPMRQNKRW-LEKSYDFQPIGIKERVNQVKEMVHAK 80
            +    Q L      +     I    + Q K+  L + Y    +G++E   +V +++   
Sbjct: 260 EV---AQQLDVKYKHIYIQMGIEIYDVGQCKKANLSRRYPEHAVGLEESSREVIDLLEWG 316

Query: 79  GDEMARAVVIHGLGGFGKTYVAKSV 5
             + A AV++HG GG GKT +A +V
Sbjct: 317 SQQNAVAVILHGFGGMGKTTLADAV 341


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