BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00001642
         (445 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002520003.1| hypothetical protein EpeqC_p069 (chloroplast...   181   1e-43
ref|YP_008082239.1| hypothetical protein (chloroplast) [Gnetum m...    86   4e-15
ref|YP_002519738.1| hypothetical protein GnpaC_p010 [Gnetum parv...    86   4e-15
dbj|BAH11181.1| hypothetical protein (chloroplast) [Welwitschia ...    60   4e-07
ref|YP_001876624.1| hypothetical chloroplast RF1 [Welwitschia mi...    60   4e-07

>ref|YP_002520003.1| hypothetical protein EpeqC_p069 (chloroplast) [Ephedra equisetina]
           gi|220983604|dbj|BAH11371.1| hypothetical protein
           (chloroplast) [Ephedra equisetina]
          Length = 2018

 Score =  181 bits (458), Expect = 1e-43
 Identities = 102/147 (69%), Positives = 103/147 (70%)
 Frame = -3

Query: 443 RGETFQEFEDPLLCRSSRLLMKYYKLVEKLSMTRWKAFGKVYNXXXXXXXXXRAIEIXXX 264
           RGE FQEFEDPLLC+SSRLLMKYYKLVEKLSMTRWKAFGKVYN         RAIEI   
Sbjct: 443 RGENFQEFEDPLLCKSSRLLMKYYKLVEKLSMTRWKAFGKVYNEERKKRKEERAIEILWN 502

Query: 263 XXXXXXXXXXXXXXXXKNVYEIQKGRDSXXXXXXXXXXXXXXXERLLLAMGRIKEKLDFY 84
                           KNVYEIQKGRDS               ERLLLAMGRIKEKLDFY
Sbjct: 503 KLEKRLKKKELQEKEYKNVYEIQKGRDSITFEMFPEEEEITPEERLLLAMGRIKEKLDFY 562

Query: 83  DTVKTRFILRFEKTEQDLIEQIIVEEQ 3
           DTVKTRFILRFEKTEQDLIEQIIVEEQ
Sbjct: 563 DTVKTRFILRFEKTEQDLIEQIIVEEQ 589


>ref|YP_008082239.1| hypothetical protein (chloroplast) [Gnetum montanum]
           gi|490345065|gb|AGL11085.1| hypothetical protein
           (chloroplast) [Gnetum montanum]
          Length = 2349

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 57/151 (37%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
 Frame = -3

Query: 440 GETFQEFEDPLLCRSSRLLMKYYKLVEKLSMTRWKAFGKVYNXXXXXXXXXRAIE----- 276
           G+  Q F DPLLC SSR+L+K+ K  E  S  R + F + Y          RAIE     
Sbjct: 508 GDNLQLFNDPLLCGSSRVLVKHCKWAEIFSQVRLRTFTEEYGDEQKKRIEERAIENLWKM 567

Query: 275 IXXXXXXXXXXXXXXXXXXXKNVYEIQKGRDSXXXXXXXXXXXXXXXERLLLAMGRIKEK 96
           +                   ++V EI+KGR S               +R LLA   ++EK
Sbjct: 568 VEKKVEENEWKEKEQQEKEQQSVLEIKKGRGSIAVELPKEEEQLTTEQRRLLATENVQEK 627

Query: 95  LDFYDTVKTRFILRFEKTEQDLIEQIIVEEQ 3
           LDFYDTVKTRF LRFE+ + +LI+Q   EEQ
Sbjct: 628 LDFYDTVKTRFSLRFEEEKHELIKQFFSEEQ 658


>ref|YP_002519738.1| hypothetical protein GnpaC_p010 [Gnetum parvifolium]
           gi|220983480|dbj|BAH11248.1| hypothetical protein
           (chloroplast) [Gnetum parvifolium]
          Length = 1540

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 57/151 (37%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
 Frame = -3

Query: 440 GETFQEFEDPLLCRSSRLLMKYYKLVEKLSMTRWKAFGKVYNXXXXXXXXXRAIE----- 276
           G+  Q F DPLLC SSR+L+K+ K  E  S  R + F + Y          RAIE     
Sbjct: 508 GDNLQLFNDPLLCGSSRVLVKHCKWAEIFSQVRLRTFTEEYGDEQKKRIEERAIENLWKM 567

Query: 275 IXXXXXXXXXXXXXXXXXXXKNVYEIQKGRDSXXXXXXXXXXXXXXXERLLLAMGRIKEK 96
           +                   ++V EI+KGR S               +R LLA   ++EK
Sbjct: 568 VEKKVEENEWKEKEQQEKEQQSVLEIKKGRGSIAVELPKEEEQLTTEQRRLLATENVQEK 627

Query: 95  LDFYDTVKTRFILRFEKTEQDLIEQIIVEEQ 3
           LDFYDTVKTRF LRFE+ + +LI+Q   EEQ
Sbjct: 628 LDFYDTVKTRFSLRFEEEKHELIKQFFSEEQ 658


>dbj|BAH11181.1| hypothetical protein (chloroplast) [Welwitschia mirabilis]
          Length = 2575

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/56 (57%), Positives = 37/56 (66%)
 Frame = -3

Query: 443 RGETFQEFEDPLLCRSSRLLMKYYKLVEKLSMTRWKAFGKVYNXXXXXXXXXRAIE 276
           +GETFQ F+DPLLC SSR+LMKYYK VEKL+  R K F + Y          RAIE
Sbjct: 529 QGETFQFFDDPLLCGSSRVLMKYYKQVEKLARARIKIFREEYEYEKKKRTDERAIE 584


>ref|YP_001876624.1| hypothetical chloroplast RF1 [Welwitschia mirabilis]
           gi|163311679|gb|ABY26837.1| hypothetical chloroplast RF1
           [Welwitschia mirabilis]
          Length = 2659

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/56 (57%), Positives = 37/56 (66%)
 Frame = -3

Query: 443 RGETFQEFEDPLLCRSSRLLMKYYKLVEKLSMTRWKAFGKVYNXXXXXXXXXRAIE 276
           +GETFQ F+DPLLC SSR+LMKYYK VEKL+  R K F + Y          RAIE
Sbjct: 576 QGETFQFFDDPLLCGSSRVLMKYYKQVEKLARARIKIFREEYEYEKKKRTDERAIE 631