BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00001607
         (477 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74801.1| hypothetical protein VITISV_006288 [Vitis vinifera]   127   1e-27
ref|XP_006421904.1| hypothetical protein CICLE_v10005929mg [Citr...   126   3e-27
gb|EOY23171.1| Cleavage/polyadenylation specificity factor, 25kD...   126   3e-27
ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...   126   3e-27
tpg|DAA35292.1| TPA: hypothetical protein ZEAMMB73_890316 [Zea m...   123   2e-26
ref|XP_002448797.1| hypothetical protein SORBIDRAFT_06g033360 [S...   123   2e-26
gb|ACG33128.1| cleavage and polyadenylation specificity factor 5...   123   2e-26
ref|NP_001141685.1| uncharacterized protein LOC100273812 [Zea ma...   123   2e-26
emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group]               123   2e-26
gb|EXC15973.1| Cleavage and polyadenylation specificity factor s...   123   3e-26
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...   123   3e-26
gb|ESW19694.1| hypothetical protein PHAVU_006G147400g [Phaseolus...   122   4e-26
gb|EMJ19638.1| hypothetical protein PRUPE_ppa011679mg [Prunus pe...   122   4e-26
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec...   122   4e-26
gb|AFK45606.1| unknown [Lotus japonicus]                              122   4e-26
ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycin...   122   4e-26
ref|XP_006827703.1| hypothetical protein AMTR_s00009p00259100 [A...   122   7e-26
ref|XP_004308094.1| PREDICTED: cleavage and polyadenylation spec...   122   7e-26
ref|NP_001054301.1| Os04g0683100 [Oryza sativa Japonica Group] g...   122   7e-26
emb|CAE03439.1| OSJNBa0032F06.22 [Oryza sativa Japonica Group]        122   7e-26

>emb|CAN74801.1| hypothetical protein VITISV_006288 [Vitis vinifera]
          Length = 244

 Score =  127 bits (320), Expect = 1e-27
 Identities = 66/92 (71%), Positives = 72/92 (78%)
 Frame = +3

Query: 201 KNERTCAFTVESYSVISSFREIFVFASMFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADR 380
           +N+  C    +S   + + RE      M + PVVN YPLSSYTFGTKEPKMEKDTSVADR
Sbjct: 15  ENDGGCQSESDSTEEVEARRE------MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADR 68

Query: 381 LARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 476
           LARMKVNYMKEGMRTSVEAILLVQEHNHPHIL
Sbjct: 69  LARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 100


>ref|XP_006421904.1| hypothetical protein CICLE_v10005929mg [Citrus clementina]
           gi|568874546|ref|XP_006490376.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Citrus sinensis] gi|557523777|gb|ESR35144.1|
           hypothetical protein CICLE_v10005929mg [Citrus
           clementina]
          Length = 200

 Score =  126 bits (316), Expect = 3e-27
 Identities = 61/65 (93%), Positives = 62/65 (95%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M + PVVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>gb|EOY23171.1| Cleavage/polyadenylation specificity factor, 25kDa subunit
           [Theobroma cacao]
          Length = 200

 Score =  126 bits (316), Expect = 3e-27
 Identities = 61/65 (93%), Positives = 62/65 (95%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M + PVVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  126 bits (316), Expect = 3e-27
 Identities = 61/65 (93%), Positives = 62/65 (95%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M + PVVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>tpg|DAA35292.1| TPA: hypothetical protein ZEAMMB73_890316 [Zea mays]
          Length = 186

 Score =  123 bits (309), Expect = 2e-26
 Identities = 59/63 (93%), Positives = 61/63 (96%)
 Frame = +3

Query: 288 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 467
           S PVVN YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5   SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64

Query: 468 HIL 476
           HIL
Sbjct: 65  HIL 67


>ref|XP_002448797.1| hypothetical protein SORBIDRAFT_06g033360 [Sorghum bicolor]
           gi|241939980|gb|EES13125.1| hypothetical protein
           SORBIDRAFT_06g033360 [Sorghum bicolor]
          Length = 202

 Score =  123 bits (309), Expect = 2e-26
 Identities = 59/63 (93%), Positives = 61/63 (96%)
 Frame = +3

Query: 288 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 467
           S PVVN YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5   SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64

Query: 468 HIL 476
           HIL
Sbjct: 65  HIL 67


>gb|ACG33128.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
          Length = 202

 Score =  123 bits (309), Expect = 2e-26
 Identities = 59/63 (93%), Positives = 61/63 (96%)
 Frame = +3

Query: 288 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 467
           S PVVN YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5   SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64

Query: 468 HIL 476
           HIL
Sbjct: 65  HIL 67


>ref|NP_001141685.1| uncharacterized protein LOC100273812 [Zea mays]
           gi|514741959|ref|XP_004960022.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Setaria italica] gi|194705542|gb|ACF86855.1| unknown
           [Zea mays] gi|218195850|gb|EEC78277.1| hypothetical
           protein OsI_17973 [Oryza sativa Indica Group]
           gi|222629797|gb|EEE61929.1| hypothetical protein
           OsJ_16671 [Oryza sativa Japonica Group]
           gi|223944619|gb|ACN26393.1| unknown [Zea mays]
           gi|414584722|tpg|DAA35293.1| TPA: cleavage and
           polyadenylation specificity factor 5 [Zea mays]
          Length = 202

 Score =  123 bits (309), Expect = 2e-26
 Identities = 59/63 (93%), Positives = 61/63 (96%)
 Frame = +3

Query: 288 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 467
           S PVVN YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5   SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64

Query: 468 HIL 476
           HIL
Sbjct: 65  HIL 67


>emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group]
          Length = 2505

 Score =  123 bits (309), Expect = 2e-26
 Identities = 59/63 (93%), Positives = 61/63 (96%)
 Frame = +3

Query: 288 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 467
           S PVVN YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5   SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64

Query: 468 HIL 476
           HIL
Sbjct: 65  HIL 67


>gb|EXC15973.1| Cleavage and polyadenylation specificity factor subunit 5 [Morus
           notabilis]
          Length = 277

 Score =  123 bits (308), Expect = 3e-26
 Identities = 60/65 (92%), Positives = 61/65 (93%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M +  VVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1   MVTSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score =  123 bits (308), Expect = 3e-26
 Identities = 60/65 (92%), Positives = 61/65 (93%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M +  VVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1   MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>gb|ESW19694.1| hypothetical protein PHAVU_006G147400g [Phaseolus vulgaris]
          Length = 200

 Score =  122 bits (307), Expect = 4e-26
 Identities = 60/65 (92%), Positives = 60/65 (92%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M S  VVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>gb|EMJ19638.1| hypothetical protein PRUPE_ppa011679mg [Prunus persica]
          Length = 200

 Score =  122 bits (307), Expect = 4e-26
 Identities = 59/65 (90%), Positives = 61/65 (93%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M +  VVN YPLSSYTFGTKEPKMEKDTSVADRLARMK+NYMKEGMRTSVEAILLVQEHN
Sbjct: 1   MVTSAVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKINYMKEGMRTSVEAILLVQEHN 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 200

 Score =  122 bits (307), Expect = 4e-26
 Identities = 59/65 (90%), Positives = 61/65 (93%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M + PVVN YPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH 
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>gb|AFK45606.1| unknown [Lotus japonicus]
          Length = 200

 Score =  122 bits (307), Expect = 4e-26
 Identities = 60/65 (92%), Positives = 60/65 (92%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M S  VVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
           gi|255627433|gb|ACU14061.1| unknown [Glycine max]
          Length = 200

 Score =  122 bits (307), Expect = 4e-26
 Identities = 60/65 (92%), Positives = 60/65 (92%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M S  VVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>ref|XP_006827703.1| hypothetical protein AMTR_s00009p00259100 [Amborella trichopoda]
           gi|548832323|gb|ERM95119.1| hypothetical protein
           AMTR_s00009p00259100 [Amborella trichopoda]
          Length = 200

 Score =  122 bits (305), Expect = 7e-26
 Identities = 59/65 (90%), Positives = 62/65 (95%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M +  VVNAYPLSSYTFGTKEPKMEKDTSVA+RLARM+VNYMKEGMRTSVEAILLVQEHN
Sbjct: 1   MVTSSVVNAYPLSSYTFGTKEPKMEKDTSVAERLARMRVNYMKEGMRTSVEAILLVQEHN 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>ref|XP_004308094.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Fragaria vesca subsp. vesca]
          Length = 200

 Score =  122 bits (305), Expect = 7e-26
 Identities = 59/65 (90%), Positives = 61/65 (93%)
 Frame = +3

Query: 282 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 461
           M +  +VN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1   MVTSAMVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 462 HPHIL 476
           HPHIL
Sbjct: 61  HPHIL 65


>ref|NP_001054301.1| Os04g0683100 [Oryza sativa Japonica Group]
           gi|113565872|dbj|BAF16215.1| Os04g0683100, partial
           [Oryza sativa Japonica Group]
          Length = 259

 Score =  122 bits (305), Expect = 7e-26
 Identities = 58/63 (92%), Positives = 60/63 (95%)
 Frame = +3

Query: 288 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 467
           S PVVN YPL++YTFGTKEPKMEKDTSVADR ARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 62  SSPVVNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHP 121

Query: 468 HIL 476
           HIL
Sbjct: 122 HIL 124


>emb|CAE03439.1| OSJNBa0032F06.22 [Oryza sativa Japonica Group]
          Length = 202

 Score =  122 bits (305), Expect = 7e-26
 Identities = 58/63 (92%), Positives = 60/63 (95%)
 Frame = +3

Query: 288 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 467
           S PVVN YPL++YTFGTKEPKMEKDTSVADR ARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5   SSPVVNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHP 64

Query: 468 HIL 476
           HIL
Sbjct: 65  HIL 67