BLASTX nr result

ID: Ephedra27_contig00001446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00001446
         (486 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21762.1| unknown [Picea sitchensis]                              65   7e-09
gb|ABK21481.1| unknown [Picea sitchensis]                              65   7e-09
gb|EMT25753.1| Cytochrome P450 94A1 [Aegilops tauschii]                58   1e-06
gb|EMJ13257.1| hypothetical protein PRUPE_ppa011477mg [Prunus pe...    57   3e-06
ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycin...    56   4e-06
gb|ESW20052.1| hypothetical protein PHAVU_006G176900g [Phaseolus...    56   6e-06
sp|P82244.1|RK34_SPIOL RecName: Full=50S ribosomal protein L34, ...    55   7e-06

>gb|ABK21762.1| unknown [Picea sitchensis]
          Length = 143

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -3

Query: 484 ALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKVLKRRRTKGRKILVTQTNP 335
           ALGCT          RTHGFR+RM+TPGGR+V+ RRR KGRK LV QTNP
Sbjct: 88  ALGCTKRSRSRKSRARTHGFRLRMRTPGGRRVVNRRRAKGRKRLVPQTNP 137


>gb|ABK21481.1| unknown [Picea sitchensis]
          Length = 143

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -3

Query: 484 ALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKVLKRRRTKGRKILVTQTNP 335
           ALGCT          RTHGFR+RM+TPGGR+V+ RRR KGRK LV QTNP
Sbjct: 88  ALGCTKRSRSRKSRARTHGFRLRMRTPGGRRVVNRRRAKGRKRLVPQTNP 137


>gb|EMT25753.1| Cytochrome P450 94A1 [Aegilops tauschii]
          Length = 754

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/98 (35%), Positives = 49/98 (50%)
 Frame = +3

Query: 192 VEL*KLLRCVIQQIEQAVNTKQKICSLKAHADISLKDEMDYQALFPLLGFVCVTRIFLPF 371
           +++  +  CV+++        +    L     + ++  +  Q   P+  F  V R FLP 
Sbjct: 463 IQMKSIAACVLERFSFQFVGGESRPGLVFSVTLRMEGGLPMQYFVPVGEFDFVHRTFLPL 522

Query: 372 VRLRLSTFLPPGVCIRTRNPCVLALDFRDLDLLVQPRA 485
            RLR  TFLP  V IR R PC  A DF DLDLLV+ RA
Sbjct: 523 SRLRFRTFLPAVVRIRLRKPCTRASDFLDLDLLVRQRA 560


>gb|EMJ13257.1| hypothetical protein PRUPE_ppa011477mg [Prunus persica]
          Length = 209

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = -3

Query: 436 THGFRVRMQTPGGRKVLKRRRTKGRKILVTQTNP 335
           THGFR RM+T GGR +LKRRR KGRKIL T+TNP
Sbjct: 170 THGFRRRMRTTGGRAMLKRRRAKGRKILCTKTNP 203


>ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycine max]
           gi|255630327|gb|ACU15520.1| unknown [Glycine max]
          Length = 146

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = -3

Query: 436 THGFRVRMQTPGGRKVLKRRRTKGRKILVTQTNP 335
           THGFR RM TPGGR VL+RRR KGR++L T+T+P
Sbjct: 109 THGFRKRMSTPGGRAVLRRRRAKGRRVLCTKTHP 142


>gb|ESW20052.1| hypothetical protein PHAVU_006G176900g [Phaseolus vulgaris]
          Length = 147

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = -3

Query: 436 THGFRVRMQTPGGRKVLKRRRTKGRKILVTQTNP 335
           THGFR RM TPGGR +L+RRR KGRKIL T+++P
Sbjct: 110 THGFRKRMSTPGGRAILRRRRAKGRKILCTKSHP 143


>sp|P82244.1|RK34_SPIOL RecName: Full=50S ribosomal protein L34, chloroplastic; AltName:
           Full=CL34; Flags: Precursor gi|189096152|pdb|3BBO|4
           Chain 4, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|7578860|gb|AAF64157.1|AF238221_1
           plastid ribosomal protein L34 precursor [Spinacia
           oleracea]
          Length = 152

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -3

Query: 436 THGFRVRMQTPGGRKVLKRRRTKGRKILVTQTNP 335
           THGFR+RM T  GR +LKRRR KGRKIL T+TNP
Sbjct: 111 THGFRLRMSTTSGRALLKRRRAKGRKILCTKTNP 144


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