BLASTX nr result
ID: Ephedra27_contig00001406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00001406
(648 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ... 69 1e-09
ref|XP_003607240.1| RNA-binding protein [Medicago truncatula] gi... 69 2e-09
ref|XP_003607239.1| RNA-binding protein [Medicago truncatula] gi... 69 2e-09
gb|ESW03641.1| hypothetical protein PHAVU_011G030600g [Phaseolus... 66 1e-08
ref|XP_004297745.1| PREDICTED: uncharacterized protein LOC101292... 64 5e-08
ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatul... 64 5e-08
gb|EMJ23407.1| hypothetical protein PRUPE_ppa007807mg [Prunus pe... 62 2e-07
ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262... 61 2e-07
emb|CBI27136.3| unnamed protein product [Vitis vinifera] 61 2e-07
ref|XP_006297119.1| hypothetical protein CARUB_v10013117mg [Caps... 59 9e-07
ref|XP_006297118.1| hypothetical protein CARUB_v10013117mg [Caps... 59 9e-07
ref|XP_006297117.1| hypothetical protein CARUB_v10013117mg [Caps... 59 9e-07
ref|XP_006297116.1| hypothetical protein CARUB_v10013117mg [Caps... 59 9e-07
ref|XP_006592048.1| PREDICTED: nucleolin 2-like isoform X3 [Glyc... 59 2e-06
ref|XP_006592047.1| PREDICTED: nucleolin 2-like isoform X2 [Glyc... 59 2e-06
ref|XP_006484546.1| PREDICTED: nucleolin 2-like [Citrus sinensis] 59 2e-06
ref|XP_006437567.1| hypothetical protein CICLE_v10030875mg [Citr... 59 2e-06
ref|XP_006393330.1| hypothetical protein EUTSA_v10011361mg [Eutr... 59 2e-06
ref|XP_004231484.1| PREDICTED: uncharacterized protein LOC544064... 59 2e-06
ref|XP_003540672.1| PREDICTED: nucleolin 2-like isoform X1 [Glyc... 59 2e-06
>gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
[Pisum sativum]
Length = 611
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Frame = -3
Query: 241 NDAEIKKTPKSSNKDVEMKDVN-------ATPKTPKASGCT-SVFIGNLSFKATEDSLIE 86
++ E KTP+ KDVEM D + ATP TP +G + ++F+GNLSF +
Sbjct: 314 SEDEPSKTPQKKTKDVEMIDADKSSKKAPATPATPSENGGSKTLFVGNLSFSVQRSDIES 373
Query: 85 FFEDCGEIVGSRLPLNDEGRLKGFAFMD 2
FF++CGE+V RL +++GR KGF ++
Sbjct: 374 FFQECGEVVDVRLASDEDGRFKGFGHVE 401
>ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
gi|355508295|gb|AES89437.1| RNA-binding protein
[Medicago truncatula]
Length = 623
Score = 68.6 bits (166), Expect = 2e-09
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Frame = -3
Query: 241 NDAEIKKTPKSSNKDVEMKDVNA-------TPKTP-KASGCTSVFIGNLSFKATEDSLIE 86
++ E KTP+ KDVEM D TP TP + SG ++F+GNLSF + +
Sbjct: 323 SEDEPSKTPQKKIKDVEMVDAGKSGKKAPNTPATPIENSGSKTLFVGNLSFSVQRSDIEK 382
Query: 85 FFEDCGEIVGSRLPLNDEGRLKGFAFMD 2
FF+DCGE+V R ++EGR KGF ++
Sbjct: 383 FFQDCGEVVDVRFSSDEEGRFKGFGHVE 410
>ref|XP_003607239.1| RNA-binding protein [Medicago truncatula]
gi|355508294|gb|AES89436.1| RNA-binding protein
[Medicago truncatula]
Length = 635
Score = 68.6 bits (166), Expect = 2e-09
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Frame = -3
Query: 241 NDAEIKKTPKSSNKDVEMKDVNA-------TPKTP-KASGCTSVFIGNLSFKATEDSLIE 86
++ E KTP+ KDVEM D TP TP + SG ++F+GNLSF + +
Sbjct: 335 SEDEPSKTPQKKIKDVEMVDAGKSGKKAPNTPATPIENSGSKTLFVGNLSFSVQRSDIEK 394
Query: 85 FFEDCGEIVGSRLPLNDEGRLKGFAFMD 2
FF+DCGE+V R ++EGR KGF ++
Sbjct: 395 FFQDCGEVVDVRFSSDEEGRFKGFGHVE 422
>gb|ESW03641.1| hypothetical protein PHAVU_011G030600g [Phaseolus vulgaris]
Length = 693
Score = 65.9 bits (159), Expect = 1e-08
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Frame = -3
Query: 241 NDAEIKKTPKSSNKDVEMKDVNATPKTP--------KASGCTSVFIGNLSFKATEDSLIE 86
++ E KTP+ +DVEM D +A KTP ++ ++F GNL++ + +
Sbjct: 388 SEEEQSKTPQKRARDVEMVDASAGKKTPNTPITPNAESGASNTIFAGNLAYSVERSDVED 447
Query: 85 FFEDCGEIVGSRLPLNDEGRLKGFAFMD 2
FF+DCGE+V RL +++GR KGF ++
Sbjct: 448 FFKDCGEVVDVRLATDEDGRFKGFGHVE 475
>ref|XP_004297745.1| PREDICTED: uncharacterized protein LOC101292789 [Fragaria vesca
subsp. vesca]
Length = 601
Score = 63.5 bits (153), Expect = 5e-08
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Frame = -3
Query: 223 KTPKSSNKDVEMKDVNA--------TPKTPKASGCTSVFIGNLSFKATEDSLIEFFEDCG 68
KTPK + DVEM D + TP TP+ SG ++F GNLS+ + ++EFF++ G
Sbjct: 312 KTPKKKDSDVEMVDAQSKSEKKAPKTPATPETSGSKTLFAGNLSYNIEQKDVVEFFKNVG 371
Query: 67 EIVGSRLPLNDEGRLKGFAFMD 2
++V RL + +G KG+ ++
Sbjct: 372 QVVDVRLSSDADGNFKGYGHVE 393
>ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein
[Medicago truncatula]
Length = 643
Score = 63.5 bits (153), Expect = 5e-08
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Frame = -3
Query: 241 NDAEIKKTPKSSNKDVEMKDVNATPK-------------TP-KASGCTSVFIGNLSFKAT 104
++ E KTP+ KDVEM D + K TP + SG ++F+GNLSF
Sbjct: 337 SEDEPSKTPQKKIKDVEMVDAGKSGKKAVVNLSILIPHATPIENSGSKTLFVGNLSFSVQ 396
Query: 103 EDSLIEFFEDCGEIVGSRLPLNDEGRLKGFAFMD 2
+ +FF+DCGE+V R ++EGR KGF ++
Sbjct: 397 RSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVE 430
>gb|EMJ23407.1| hypothetical protein PRUPE_ppa007807mg [Prunus persica]
Length = 355
Score = 61.6 bits (148), Expect = 2e-07
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Frame = -3
Query: 232 EIKKTPKSSNKDVEMKDVNA--------TPKTPKASGCTSVFIGNLSFKATEDSLIEFFE 77
E KTPK + DVEM D ++ TP TP+A+ ++F+GNLSF + FF+
Sbjct: 56 EPAKTPKKKDTDVEMVDADSKSEKKAPKTPATPEATTSKTLFVGNLSFNVERADVENFFK 115
Query: 76 DCGEIVGSRLPLNDEGRLKGFAFMD 2
D GEIV R ++G +GF ++
Sbjct: 116 DAGEIVDVRFTTTEDGVFRGFGHVE 140
>ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262769 [Vitis vinifera]
Length = 664
Score = 61.2 bits (147), Expect = 2e-07
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 17/98 (17%)
Frame = -3
Query: 244 ANDAEIKKTPKSSNKDVEMKDVNA------------TPKTP-----KASGCTSVFIGNLS 116
+++ E KTPK + DVEM D PKTP +++G ++F+GNLS
Sbjct: 351 SDEEEPSKTPKKNGTDVEMVDAETPAKQTDSKSGKKAPKTPATPQVESTGSKTLFVGNLS 410
Query: 115 FKATEDSLIEFFEDCGEIVGSRLPLNDEGRLKGFAFMD 2
F ++ + FF+D GE+V R + +GR KGF ++
Sbjct: 411 FSVQKEDVEHFFKDAGEVVDVRFSSDADGRFKGFGHVE 448
>emb|CBI27136.3| unnamed protein product [Vitis vinifera]
Length = 691
Score = 61.2 bits (147), Expect = 2e-07
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 17/98 (17%)
Frame = -3
Query: 244 ANDAEIKKTPKSSNKDVEMKDVNA------------TPKTP-----KASGCTSVFIGNLS 116
+++ E KTPK + DVEM D PKTP +++G ++F+GNLS
Sbjct: 397 SDEEEPSKTPKKNGTDVEMVDAETPAKQTDSKSGKKAPKTPATPQVESTGSKTLFVGNLS 456
Query: 115 FKATEDSLIEFFEDCGEIVGSRLPLNDEGRLKGFAFMD 2
F ++ + FF+D GE+V R + +GR KGF ++
Sbjct: 457 FSVQKEDVEHFFKDAGEVVDVRFSSDADGRFKGFGHVE 494
>ref|XP_006297119.1| hypothetical protein CARUB_v10013117mg [Capsella rubella]
gi|482565828|gb|EOA30017.1| hypothetical protein
CARUB_v10013117mg [Capsella rubella]
Length = 686
Score = 59.3 bits (142), Expect = 9e-07
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Frame = -3
Query: 226 KKTPKSSNKDVEM-----KDVNATPKTPKAS---GCTSVFIGNLSFKATEDSLIEFFEDC 71
K TPK + D EM K + PKTP + G ++F GNLS+ + + +FF++
Sbjct: 407 KVTPKKKDSDTEMVDAEQKSITKQPKTPTSQNQGGTKTLFAGNLSYGVKKADIEDFFKEA 466
Query: 70 GEIVGSRLPLNDEGRLKGFAFMD 2
GE+V R+ L+++G++KGF ++
Sbjct: 467 GEVVDVRIALHEDGKMKGFGHVE 489
>ref|XP_006297118.1| hypothetical protein CARUB_v10013117mg [Capsella rubella]
gi|482565827|gb|EOA30016.1| hypothetical protein
CARUB_v10013117mg [Capsella rubella]
Length = 660
Score = 59.3 bits (142), Expect = 9e-07
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Frame = -3
Query: 226 KKTPKSSNKDVEM-----KDVNATPKTPKAS---GCTSVFIGNLSFKATEDSLIEFFEDC 71
K TPK + D EM K + PKTP + G ++F GNLS+ + + +FF++
Sbjct: 381 KVTPKKKDSDTEMVDAEQKSITKQPKTPTSQNQGGTKTLFAGNLSYGVKKADIEDFFKEA 440
Query: 70 GEIVGSRLPLNDEGRLKGFAFMD 2
GE+V R+ L+++G++KGF ++
Sbjct: 441 GEVVDVRIALHEDGKMKGFGHVE 463
>ref|XP_006297117.1| hypothetical protein CARUB_v10013117mg [Capsella rubella]
gi|482565826|gb|EOA30015.1| hypothetical protein
CARUB_v10013117mg [Capsella rubella]
Length = 634
Score = 59.3 bits (142), Expect = 9e-07
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Frame = -3
Query: 226 KKTPKSSNKDVEM-----KDVNATPKTPKAS---GCTSVFIGNLSFKATEDSLIEFFEDC 71
K TPK + D EM K + PKTP + G ++F GNLS+ + + +FF++
Sbjct: 355 KVTPKKKDSDTEMVDAEQKSITKQPKTPTSQNQGGTKTLFAGNLSYGVKKADIEDFFKEA 414
Query: 70 GEIVGSRLPLNDEGRLKGFAFMD 2
GE+V R+ L+++G++KGF ++
Sbjct: 415 GEVVDVRIALHEDGKMKGFGHVE 437
>ref|XP_006297116.1| hypothetical protein CARUB_v10013117mg [Capsella rubella]
gi|482565825|gb|EOA30014.1| hypothetical protein
CARUB_v10013117mg [Capsella rubella]
Length = 596
Score = 59.3 bits (142), Expect = 9e-07
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Frame = -3
Query: 226 KKTPKSSNKDVEM-----KDVNATPKTPKAS---GCTSVFIGNLSFKATEDSLIEFFEDC 71
K TPK + D EM K + PKTP + G ++F GNLS+ + + +FF++
Sbjct: 317 KVTPKKKDSDTEMVDAEQKSITKQPKTPTSQNQGGTKTLFAGNLSYGVKKADIEDFFKEA 376
Query: 70 GEIVGSRLPLNDEGRLKGFAFMD 2
GE+V R+ L+++G++KGF ++
Sbjct: 377 GEVVDVRIALHEDGKMKGFGHVE 399
>ref|XP_006592048.1| PREDICTED: nucleolin 2-like isoform X3 [Glycine max]
Length = 585
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Frame = -3
Query: 241 NDAEIKKTPKSSNKDVEMKDVNA-------TPKTPK--ASGCTSVFIGNLSFKATEDSLI 89
++ E KTP+ ++DVEM D + TP TPK ++F+GNL F +
Sbjct: 273 SEEEPSKTPQKRDRDVEMVDAASSGKKAPKTPVTPKEETGASKTLFVGNLPFSVERADVE 332
Query: 88 EFFEDCGEIVGSRLPLNDEGRLKGFAFMD 2
+FF+D GE+V R +D G+ KGF ++
Sbjct: 333 DFFKDAGEVVDVRFATDDTGKFKGFGHVE 361
>ref|XP_006592047.1| PREDICTED: nucleolin 2-like isoform X2 [Glycine max]
Length = 666
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Frame = -3
Query: 241 NDAEIKKTPKSSNKDVEMKDVNA-------TPKTPK--ASGCTSVFIGNLSFKATEDSLI 89
++ E KTP+ ++DVEM D + TP TPK ++F+GNL F +
Sbjct: 354 SEEEPSKTPQKRDRDVEMVDAASSGKKAPKTPVTPKEETGASKTLFVGNLPFSVERADVE 413
Query: 88 EFFEDCGEIVGSRLPLNDEGRLKGFAFMD 2
+FF+D GE+V R +D G+ KGF ++
Sbjct: 414 DFFKDAGEVVDVRFATDDTGKFKGFGHVE 442
>ref|XP_006484546.1| PREDICTED: nucleolin 2-like [Citrus sinensis]
Length = 686
Score = 58.5 bits (140), Expect = 2e-06
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Frame = -3
Query: 238 DAEIKKTPKSSNKDVEMKDVNA------TPKTPKASGCTSVFIGNLSFKATEDSLIEFFE 77
+ E KTPK + DV+M D + TP TP++ G ++F+GNL F + + FF
Sbjct: 390 EEEASKTPKKNVTDVKMVDAESGKKAAQTPFTPQSGGSKTLFVGNLPFSVEQADVQNFFS 449
Query: 76 DCGEIVGSRLPLNDEGRLKGFAFMD 2
+ E+V RL + +GR KG+ ++
Sbjct: 450 EVAEVVDVRLSSDADGRFKGYGHVE 474
>ref|XP_006437567.1| hypothetical protein CICLE_v10030875mg [Citrus clementina]
gi|557539763|gb|ESR50807.1| hypothetical protein
CICLE_v10030875mg [Citrus clementina]
Length = 686
Score = 58.5 bits (140), Expect = 2e-06
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Frame = -3
Query: 238 DAEIKKTPKSSNKDVEMKDVNA------TPKTPKASGCTSVFIGNLSFKATEDSLIEFFE 77
+ E KTPK + DV+M D + TP TP++ G ++F+GNL F + + FF
Sbjct: 390 EEEASKTPKKNVTDVKMVDAESGKKAAQTPFTPQSGGSKTLFVGNLPFSVEQADVQNFFS 449
Query: 76 DCGEIVGSRLPLNDEGRLKGFAFMD 2
+ E+V RL + +GR KG+ ++
Sbjct: 450 EVAEVVDVRLSSDADGRFKGYGHVE 474
>ref|XP_006393330.1| hypothetical protein EUTSA_v10011361mg [Eutrema salsugineum]
gi|557089908|gb|ESQ30616.1| hypothetical protein
EUTSA_v10011361mg [Eutrema salsugineum]
Length = 556
Score = 58.5 bits (140), Expect = 2e-06
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Frame = -3
Query: 226 KKTPKSSNKDVEMKDVNA-------TPKTPKASGCTSVFIGNLSFKATEDSLIEFFEDCG 68
K+TPK N DVEM D TP TP G ++F+ NLSF+ + FF++ G
Sbjct: 267 KETPKKKNSDVEMVDAEQKSAKQPKTPSTPATGGSKTLFVANLSFQVERSDVENFFKEAG 326
Query: 67 EIVGSRLPLN-DEGRLKGFAFMD 2
E+V R ++ ++G +GF ++
Sbjct: 327 EVVDVRFAMSKEDGSFRGFGHVE 349
>ref|XP_004231484.1| PREDICTED: uncharacterized protein LOC544064 [Solanum lycopersicum]
Length = 632
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Frame = -3
Query: 238 DAEIKKTPKSSNKDVEMKDVNA-----TPKTPKAS---GCTSVFIGNLSFKATEDSLIEF 83
D + KTPK DVEM D + TP TPKA G ++F+GNLS+ + + F
Sbjct: 328 DDKPSKTPKKQGADVEMVDAPSAKAQQTPITPKAQTPGGSKTLFVGNLSYSVEQADVENF 387
Query: 82 FEDCGEIVGSRLPLNDEGRLKGFAFMD 2
F+D GE+ R +++G KGF ++
Sbjct: 388 FKDAGEVQEVRFATHEDGSFKGFGHVE 414
>ref|XP_003540672.1| PREDICTED: nucleolin 2-like isoform X1 [Glycine max]
Length = 744
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Frame = -3
Query: 241 NDAEIKKTPKSSNKDVEMKDVNA-------TPKTPK--ASGCTSVFIGNLSFKATEDSLI 89
++ E KTP+ ++DVEM D + TP TPK ++F+GNL F +
Sbjct: 432 SEEEPSKTPQKRDRDVEMVDAASSGKKAPKTPVTPKEETGASKTLFVGNLPFSVERADVE 491
Query: 88 EFFEDCGEIVGSRLPLNDEGRLKGFAFMD 2
+FF+D GE+V R +D G+ KGF ++
Sbjct: 492 DFFKDAGEVVDVRFATDDTGKFKGFGHVE 520