BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00001304
         (457 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237239.1| uncharacterized protein LOC100527009 [Glycin...    80   2e-13
ref|XP_006581353.1| PREDICTED: ATP synthase subunit b', chloropl...    78   1e-12
gb|ESW09003.1| hypothetical protein PHAVU_009G092400g [Phaseolus...    75   7e-12
gb|EMJ23551.1| hypothetical protein PRUPE_ppa009745mg [Prunus pe...    75   7e-12
gb|ABK22241.1| unknown [Picea sitchensis]                              75   9e-12
gb|ABK23922.1| unknown [Picea sitchensis]                              74   2e-11
ref|NP_001049730.1| Os03g0278900 [Oryza sativa Japonica Group] g...    73   3e-11
ref|XP_004501345.1| PREDICTED: ATP synthase subunit b', chloropl...    73   5e-11
gb|EAY89475.1| hypothetical protein OsI_11006 [Oryza sativa Indi...    73   5e-11
ref|XP_004984757.1| PREDICTED: ATP synthase subunit b', chloropl...    72   8e-11
gb|AFW88798.1| ATP synthase B chain [Zea mays]                         72   8e-11
ref|NP_001148946.1| LOC100282566 [Zea mays] gi|195623522|gb|ACG3...    72   1e-10
gb|ACG30589.1| ATP synthase B chain [Zea mays] gi|195628120|gb|A...    72   1e-10
ref|XP_002308670.2| hypothetical protein POPTR_0006s27170g [Popu...    72   1e-10
ref|XP_006651255.1| PREDICTED: ATP synthase subunit b', chloropl...    71   1e-10
gb|ACJ83351.1| unknown [Medicago truncatula]                           71   2e-10
ref|XP_003603370.1| ATP synthase [Medicago truncatula] gi|355492...    71   2e-10
ref|XP_006412501.1| hypothetical protein EUTSA_v10026214mg [Eutr...    70   4e-10
ref|XP_004291450.1| PREDICTED: ATP synthase subunit b', chloropl...    70   4e-10
ref|XP_002324301.2| hypothetical protein POPTR_0018s01830g [Popu...    70   4e-10

>ref|NP_001237239.1| uncharacterized protein LOC100527009 [Glycine max]
           gi|255631358|gb|ACU16046.1| unknown [Glycine max]
          Length = 215

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/63 (68%), Positives = 51/63 (80%), Gaps = 3/63 (4%)
 Frame = -2

Query: 180 MKKIQQIALVGGMNALAVL-PAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTP 10
           + K Q ++L+GG+  L +  P++A  FEKAALFDFNLTLPII  EFLLLMVALDKIWFTP
Sbjct: 45  ISKPQMLSLLGGIAPLVLARPSLAEEFEKAALFDFNLTLPIIMVEFLLLMVALDKIWFTP 104

Query: 9   LGK 1
           LGK
Sbjct: 105 LGK 107


>ref|XP_006581353.1| PREDICTED: ATP synthase subunit b', chloroplastic-like [Glycine
           max]
          Length = 215

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 3/63 (4%)
 Frame = -2

Query: 180 MKKIQQIALVGGMNALAVL-PAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTP 10
           + K Q ++L+GG+  L +  P++A   EKAALFDFNLTLPII  EFLLLMVALDKIWFTP
Sbjct: 45  ISKPQMLSLLGGIAPLVLARPSLAEEIEKAALFDFNLTLPIIMVEFLLLMVALDKIWFTP 104

Query: 9   LGK 1
           LGK
Sbjct: 105 LGK 107


>gb|ESW09003.1| hypothetical protein PHAVU_009G092400g [Phaseolus vulgaris]
          Length = 454

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 3/63 (4%)
 Frame = -2

Query: 180 MKKIQQIALVGGMNALAVL-PAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTP 10
           + K Q ++L+GG+  L +  P++A   EKAALFDFNLTLPII AE L LMVALDKIWFTP
Sbjct: 284 ISKPQMLSLLGGIAPLVLTQPSLASEIEKAALFDFNLTLPIIMAEVLFLMVALDKIWFTP 343

Query: 9   LGK 1
           LGK
Sbjct: 344 LGK 346


>gb|EMJ23551.1| hypothetical protein PRUPE_ppa009745mg [Prunus persica]
          Length = 279

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
 Frame = -2

Query: 435 TLTPFHPQTLTSQYLQTKNNKKREGKNMANALMAMNPLKISVTANTPKLFTKSIQPLNHH 256
           TL P +P   +   LQ  N  ++E   +A A M M   K+ +++ +P   +K   P+   
Sbjct: 36  TLGPSNPTHSSKSQLQRTNRNQKESSRVAMANMIMASSKVPISSPSPSPISKPRIPIQIS 95

Query: 255 RPSLVVRAQNKQSLNTVEQNTWNDRMKKIQQIALVGGMNALAVL------PAMA--FEKA 100
            P L                    ++ K Q ++L   ++ +A        P++A   EKA
Sbjct: 96  IPKLPTLP----------------KLSKSQILSLSSSLSVIAATSLSWAPPSLAEEIEKA 139

Query: 99  ALFDFNLTLPIIAAEFLLLMVALDKIWFTPLGK 1
           ALFDF+LTLPI   +FLLLMVALDK++++PLGK
Sbjct: 140 ALFDFDLTLPIQMVQFLLLMVALDKLYYSPLGK 172


>gb|ABK22241.1| unknown [Picea sitchensis]
          Length = 223

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 51/120 (42%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
 Frame = -2

Query: 339 MAMNPLKISVTANTPKLFTKSIQPLN--HHRPSLVVRAQNKQSLNTVEQNTWNDRMK--- 175
           MA   L  +    T KL  K+   ++  H RP +  + Q  Q +N      W   +K   
Sbjct: 1   MAATALMATPLIPTLKLARKTTSTISASHCRPLIQAQQQKPQIIN------WATSIKIPA 54

Query: 174 KIQQIALVGGMNALAVLPAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPLGK 1
            ++   L+    A+  LPA+A   EKA LFDFNLTLPII  EFLLLMVALD IWF P+GK
Sbjct: 55  ALRNGCLIAMNTAMVALPALAEETEKAKLFDFNLTLPIIIGEFLLLMVALDAIWFKPIGK 114


>gb|ABK23922.1| unknown [Picea sitchensis]
          Length = 223

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 50/117 (42%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
 Frame = -2

Query: 339 MAMNPLKISVTANTPKLFTKSIQPLN--HHRPSLVVRAQNKQSLNTVEQNTWNDRMKKIQ 166
           MA   L  +    T KL  K+   ++  H RP +  + Q  Q +N     T +     ++
Sbjct: 1   MAATALMATPLIPTLKLARKTTSTISASHCRPLIQAQQQKPQIINWA---TSSKIPAALR 57

Query: 165 QIALVGGMNALAVLPAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPLGK 1
              L+    A+  LPA+A   EKA LFDFNLTLPII  EFLLLMVALD IWF P+GK
Sbjct: 58  NGCLIAMNTAMVALPALAEETEKAKLFDFNLTLPIIIGEFLLLMVALDAIWFKPIGK 114


>ref|NP_001049730.1| Os03g0278900 [Oryza sativa Japonica Group]
           gi|29367413|gb|AAO72579.1| H+-transporting ATP synthase
           chain 9-like protein [Oryza sativa Japonica Group]
           gi|108707494|gb|ABF95289.1| ATP synthase B chain,
           chloroplast precursor, putative, expressed [Oryza sativa
           Japonica Group] gi|113548201|dbj|BAF11644.1|
           Os03g0278900 [Oryza sativa Japonica Group]
           gi|215694586|dbj|BAG89777.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740950|dbj|BAG97445.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 211

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 53/120 (44%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
 Frame = -2

Query: 354 MANALMAMNPLKISVTANTPKLFTKSIQPLNHHRPSLVVRAQNKQSLNTVEQNTWNDRMK 175
           MA A+MA      S     P + + S+QP          R Q +Q    ++Q        
Sbjct: 1   MATAMMAATATSCS-PRRAPVVASSSVQPPR--------RQQQQQPRRGLKQLPG----- 46

Query: 174 KIQQIALVGGMNALAVLPAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPLGK 1
               +A      A A LPA+A   EKAALFDFNLTLP+IA EFLLLMVALDK++FTPLGK
Sbjct: 47  ---LVATAAVAVAAAPLPALAEQMEKAALFDFNLTLPLIATEFLLLMVALDKLYFTPLGK 103


>ref|XP_004501345.1| PREDICTED: ATP synthase subunit b', chloroplastic-like [Cicer
           arietinum]
          Length = 213

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
 Frame = -2

Query: 183 RMKKIQQIALVGGMNALAVLP-AMAFEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPL 7
           ++ K++ I L     +LA  P ++A EKAALFDFNLTLPII  EFLLLMVALDK++FTPL
Sbjct: 44  QISKLKSITLAATSLSLAFAPPSLAIEKAALFDFNLTLPIIMVEFLLLMVALDKLYFTPL 103

Query: 6   G 4
           G
Sbjct: 104 G 104


>gb|EAY89475.1| hypothetical protein OsI_11006 [Oryza sativa Indica Group]
          Length = 211

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
 Frame = -2

Query: 138 ALAVLPAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPLGK 1
           A A LPA+A   EKAALFDFNLTLP+IA EFLLLMVALDK++FTPLGK
Sbjct: 56  AAAPLPALAEQMEKAALFDFNLTLPLIATEFLLLMVALDKLYFTPLGK 103


>ref|XP_004984757.1| PREDICTED: ATP synthase subunit b', chloroplastic-like [Setaria
           italica]
          Length = 212

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 39/56 (69%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
 Frame = -2

Query: 162 IALVGGMNALAVLPAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPLGK 1
           +A      A A LPA+A   EKAALFDFNLTLP IA EFLLLMVALDK++FTPLGK
Sbjct: 49  LATAAAAVAAAPLPALAEQMEKAALFDFNLTLPAIATEFLLLMVALDKLYFTPLGK 104


>gb|AFW88798.1| ATP synthase B chain [Zea mays]
          Length = 216

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
 Frame = -2

Query: 183 RMKKIQQIALVGGMNALAVLPAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTP 10
           ++ ++   A      A A LPA+A   EKAALFDFNLTLP IA EFLLLMVALDK++FTP
Sbjct: 46  QLPRLLATAAAAAAVAAAPLPALAEQMEKAALFDFNLTLPAIATEFLLLMVALDKLYFTP 105

Query: 9   LGK 1
           LGK
Sbjct: 106 LGK 108


>ref|NP_001148946.1| LOC100282566 [Zea mays] gi|195623522|gb|ACG33591.1| ATP synthase B
           chain [Zea mays]
          Length = 216

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
 Frame = -2

Query: 138 ALAVLPAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPLGK 1
           A A LPA+A   EKAALFDFNLTLP IA EFLLLMVALDK++FTPLGK
Sbjct: 61  AAAPLPALAEQMEKAALFDFNLTLPAIATEFLLLMVALDKLYFTPLGK 108


>gb|ACG30589.1| ATP synthase B chain [Zea mays] gi|195628120|gb|ACG35890.1| ATP
           synthase B chain [Zea mays]
          Length = 216

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
 Frame = -2

Query: 138 ALAVLPAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPLGK 1
           A A LPA+A   EKAALFDFNLTLP IA EFLLLMVALDK++FTPLGK
Sbjct: 61  AAAPLPALAEQMEKAALFDFNLTLPAIATEFLLLMVALDKLYFTPLGK 108


>ref|XP_002308670.2| hypothetical protein POPTR_0006s27170g [Populus trichocarpa]
           gi|118486525|gb|ABK95102.1| unknown [Populus
           trichocarpa] gi|550337176|gb|EEE92193.2| hypothetical
           protein POPTR_0006s27170g [Populus trichocarpa]
          Length = 220

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
 Frame = -2

Query: 354 MANALMAMNPLKISVTANTPKLFTKSIQPLNHHRPSLVVRAQNKQSLNTVEQNTWNDRMK 175
           MAN +MA +   I++++++         P N+     + +    + L   +    +    
Sbjct: 1   MANMIMASSKPLITLSSSS--------LPTNNKPKLQIPQLSFPKILKITKPQLLSLSTS 52

Query: 174 KIQQIALVGGMNALAVLPAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPLG 4
            ++ ++L+   +     P++A   EKAALFDFNLTLPII  EFL+LMVALDKIWFTPLG
Sbjct: 53  TLKSLSLIAATSLTFAPPSLAEEIEKAALFDFNLTLPIIMVEFLVLMVALDKIWFTPLG 111


>ref|XP_006651255.1| PREDICTED: ATP synthase subunit b', chloroplastic-like [Oryza
           brachyantha]
          Length = 198

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
 Frame = -2

Query: 138 ALAVLPAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPLGK 1
           A A LPA+A   EKAALFDFNLTLP IA EFLLLMVALDK++FTPLGK
Sbjct: 43  AAAPLPALAEQMEKAALFDFNLTLPAIAIEFLLLMVALDKLYFTPLGK 90


>gb|ACJ83351.1| unknown [Medicago truncatula]
          Length = 161

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = -2

Query: 219 SLNTVEQNTWNDRMKKIQQIALVG-GMNALAVLPAMAFEKAALFDFNLTLPIIAAEFLLL 43
           SL T+  N    ++ K++ + L    ++ +   P++AFEKAALFDFNLTLPII  EFL L
Sbjct: 28  SLQTITPNL-KLQLSKLKSMTLAATSLSFVFAPPSLAFEKAALFDFNLTLPIIVVEFLFL 86

Query: 42  MVALDKIWFTPLG 4
           M ALDK++FTPLG
Sbjct: 87  MFALDKLYFTPLG 99


>ref|XP_003603370.1| ATP synthase [Medicago truncatula] gi|355492418|gb|AES73621.1| ATP
           synthase [Medicago truncatula]
           gi|388517653|gb|AFK46888.1| unknown [Medicago
           truncatula]
          Length = 209

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = -2

Query: 219 SLNTVEQNTWNDRMKKIQQIALVG-GMNALAVLPAMAFEKAALFDFNLTLPIIAAEFLLL 43
           SL T+  N    ++ K++ + L    ++ +   P++AFEKAALFDFNLTLPII  EFL L
Sbjct: 28  SLQTITPNL-KLQLSKLKSMTLAATSLSFVFAPPSLAFEKAALFDFNLTLPIIVVEFLFL 86

Query: 42  MVALDKIWFTPLG 4
           M ALDK++FTPLG
Sbjct: 87  MFALDKLYFTPLG 99


>ref|XP_006412501.1| hypothetical protein EUTSA_v10026214mg [Eutrema salsugineum]
           gi|557113671|gb|ESQ53954.1| hypothetical protein
           EUTSA_v10026214mg [Eutrema salsugineum]
          Length = 216

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
 Frame = -2

Query: 354 MANALMAMNPLKISVTANTPKLFTKSIQPLNHHRPSLVVRAQNKQSLNTVEQNTWNDRMK 175
           MAN++MA         ++ P +F  S QP     P L    Q  +S+++ E  T    + 
Sbjct: 1   MANSIMA---------SSKPLIFLSSNQPSRVQIPKLAKLPQIPKSISSSELRTKALSLS 51

Query: 174 K--IQQIALVGGMNALAVLPAMAFEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPLG 4
              ++ +AL+      ++  AM  EKA LFDFNLTLPII  EFL LM ALDK++++PLG
Sbjct: 52  SATVKSLALIAAFAPPSMAEAM--EKAQLFDFNLTLPIIVVEFLFLMFALDKLYYSPLG 108


>ref|XP_004291450.1| PREDICTED: ATP synthase subunit b', chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 210

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 51/124 (41%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
 Frame = -2

Query: 354 MANALMAMNPLKISVTANT---PKLFTKSIQPLNHHRPSLVVRAQNKQSLNTVEQNTWND 184
           MAN +MA + + IS  A+    PKL      PL    P  + +    QSL ++       
Sbjct: 1   MANMIMASSKVPISAPASAVAKPKLL-----PLQISIPKTLTKTHLLQSLKSLS------ 49

Query: 183 RMKKIQQIALVGGMNALAVLP---AMAFEKAALFDFNLTLPIIAAEFLLLMVALDKIWFT 13
                     V    +LAV P   A   EKAALFDF+LTLPI A +FLLLMVALDK++++
Sbjct: 50  ----------VIAATSLAVAPPSLAAEIEKAALFDFDLTLPIQAVQFLLLMVALDKVYYS 99

Query: 12  PLGK 1
           PLGK
Sbjct: 100 PLGK 103


>ref|XP_002324301.2| hypothetical protein POPTR_0018s01830g [Populus trichocarpa]
           gi|118485650|gb|ABK94675.1| unknown [Populus
           trichocarpa] gi|550317824|gb|EEF02866.2| hypothetical
           protein POPTR_0018s01830g [Populus trichocarpa]
          Length = 220

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
 Frame = -2

Query: 354 MANALMAMNPLKISVTANTPKLFTKSIQPLNHHRPSLVV-RAQNKQSLNTVEQNTWNDRM 178
           MAN +M  +  K  +T ++  L T S       +P L + R    + L   +    +   
Sbjct: 1   MANMIMGTS--KPLITLSSSSLPTNS-------KPKLQIPRLSFPKLLKITKPQLLSLST 51

Query: 177 KKIQQIALVGGMNALAVLPAMA--FEKAALFDFNLTLPIIAAEFLLLMVALDKIWFTPLG 4
             ++ ++L+   +     P++A   EKAALFDFNLTLPII  EFL+LMVALDKIWF+PLG
Sbjct: 52  STLKSLSLIAATSLTFAPPSLAEEIEKAALFDFNLTLPIIMVEFLVLMVALDKIWFSPLG 111