BLASTX nr result

ID: Ephedra27_contig00001277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00001277
         (679 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006850440.1| hypothetical protein AMTR_s00165p00061770 [A...    59   1e-06
ref|XP_002440603.1| hypothetical protein SORBIDRAFT_09g003880 [S...    58   3e-06

>ref|XP_006850440.1| hypothetical protein AMTR_s00165p00061770 [Amborella trichopoda]
            gi|548854085|gb|ERN12021.1| hypothetical protein
            AMTR_s00165p00061770 [Amborella trichopoda]
          Length = 902

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
 Frame = +3

Query: 30   RSKMWWRGFARLLLDNKFIEDSTEHDGGGLKRRILVVQFPDVTDVGKKFLESCNSVGTAS 209
            R K+WWRG AR+L D  +I      +G  L R  + +++P  T++G +FLE+        
Sbjct: 780  RGKLWWRGLARMLEDKGYI-----REGDDLVR--VSIKYPKPTELGMRFLEA-------- 824

Query: 210  ACSQSLYLCPAADMFVANEK-------SVWSRGWADPDI 305
               + LY+ P ADM ++ +        S W+RGWA+P+I
Sbjct: 825  --KEDLYVYPEADMLLSLQNPTTSTYASEWARGWANPEI 861


>ref|XP_002440603.1| hypothetical protein SORBIDRAFT_09g003880 [Sorghum bicolor]
           gi|241945888|gb|EES19033.1| hypothetical protein
           SORBIDRAFT_09g003880 [Sorghum bicolor]
          Length = 807

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
 Frame = +3

Query: 36  KMWWRGFARLLLDNKFIEDSTEHDGGGLKRRILVVQFPDVTDVGKKFLESCNSVGTASAC 215
           KMWW+G +R+L   ++++++ E          + +Q+P++T+ G KFL S  S       
Sbjct: 678 KMWWQGLSRILEGLRYVQEAAETPR-------VSMQYPELTEEGLKFLRSSQSE------ 724

Query: 216 SQSLYLCPAADMFVA-------NEKSVWSRGWADPDI 305
            Q LY  P A M +A       ++ S W RGWADP+I
Sbjct: 725 EQPLYAYPDAAMLLAMKEPRPFSDFSEWGRGWADPEI 761


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