BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00001192
         (2418 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]               121   2e-24
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ...   117   2e-23
gb|ABB00038.1| reverse transcriptase family member [Glycine max]      117   2e-23
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...   116   4e-23
ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596...   114   2e-22
emb|CCH50976.1| T4.15 [Malus x robusta]                               114   3e-22
gb|AAT38756.2| Putative methyltransferase family protein [Solanu...   113   4e-22
ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis] g...   112   8e-22
ref|WP_008409321.1| hypothetical protein [Bacillus isronensis] g...   112   8e-22
gb|AEJ72569.1| putative reverse transcriptase family member [Mal...   110   3e-21
gb|EMT05664.1| hypothetical protein F775_16727 [Aegilops tauschii]    110   4e-21
gb|EMT21982.1| Callose synthase 9 [Aegilops tauschii]                 108   1e-20
ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma...   107   3e-20
emb|CBL94165.1| putative reverse transcriptase family member [Ma...   106   4e-20
gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-...   104   2e-19
gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...   102   6e-19
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus...   102   1e-18
gb|EMS59381.1| Phospholipid-transporting ATPase 2 [Triticum urartu]   102   1e-18
gb|EMS57239.1| hypothetical protein TRIUR3_19949 [Triticum urartu]    102   1e-18
emb|CDJ93072.1| RNA-directed DNA polymerase (reverse transcripta...   101   1e-18

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score =  121 bits (303), Expect = 2e-24
 Identities = 56/107 (52%), Positives = 74/107 (69%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLRWMC  TR DK+RNE   E VGVA + DKLRE  LRWFGHVKRR   AP+R+ +++ 
Sbjct: 585 RMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCEVMV 644

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVAD 321
            +G  R R RPK  W ++IR+D+    ++E+  L+R EW++RI V D
Sbjct: 645 VEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRSRIKVED 691


>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Brachypodium distachyon]
          Length = 307

 Score =  117 bits (294), Expect = 2e-23
 Identities = 53/108 (49%), Positives = 73/108 (67%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLRWMC  TR+D VRN+   + VGVAPI +KL ++ LRWFGH++RRPL AP+    L  
Sbjct: 200 RMLRWMCGHTRRDHVRNDDIRDRVGVAPIAEKLVQHRLRWFGHIQRRPLDAPVHSGRLKR 259

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
              + R R RP LTW + +++D+    +++E A+NRT WK  IHV +P
Sbjct: 260 AGNVKRGRGRPNLTWEESVKRDLKGWNITKELAMNRTAWKLAIHVTEP 307


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score =  117 bits (294), Expect = 2e-23
 Identities = 58/108 (53%), Positives = 74/108 (68%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLRWMC KTR+DK+RNE   E VGVAPI +K+ EN LRWFGHV+RRP+ + +R+ D + 
Sbjct: 269 RMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHVERRPVDSVLRRVDQME 328

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
                R R RPK T  ++I+KD+   GL     L+RT W+  IHVADP
Sbjct: 329 RRQTIRGRGRPKKTIREVIKKDLEINGLDRSMVLDRTLWRKLIHVADP 376


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score =  116 bits (291), Expect = 4e-23
 Identities = 52/108 (48%), Positives = 73/108 (67%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLRWMC  TR+D+VRN+   + VGVAPI +KL ++ LRWFGH++RRPL AP+    L  
Sbjct: 460 RMLRWMCGHTRRDRVRNDDIRDRVGVAPIAEKLVQHRLRWFGHIQRRPLDAPVHSGRLKR 519

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
              + R R RP LTW + +++D+    +++E A+NR  WK  IHV +P
Sbjct: 520 AGNVKRGRGRPNLTWEESVKRDLKGWNITKELAMNRAAWKLAIHVPEP 567


>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
          Length = 278

 Score =  114 bits (285), Expect = 2e-22
 Identities = 53/105 (50%), Positives = 71/105 (67%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLRWMC  TR DK+RNE   E VGVA + DKLRE  LRWFGHV+RR   AP+R+ + + 
Sbjct: 172 RMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVRRRCADAPVRRCEGLV 231

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHV 315
            +G  R R RPK  W ++IR+D+    ++E+  L+R  W++RI V
Sbjct: 232 VEGTRRGRGRPKKYWGEVIRQDLAQLHITEDMTLDRKAWRSRIKV 276


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  114 bits (284), Expect = 3e-22
 Identities = 55/108 (50%), Positives = 73/108 (67%)
 Frame = +1

Query: 1    RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
            RMLRWMC  TRKDK+RNE     VGVA I+ K+REN LRWFGHV+RRP  APIR+ D   
Sbjct: 877  RMLRWMCGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYGT 936

Query: 181  FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
                 R R RP+ T  + +RKD+    L+++   +R +W+++IH+ADP
Sbjct: 937  EVQGRRGRGRPRKTLEETLRKDLEYLDLTKDMTQDRAQWRSKIHIADP 984


>gb|AAT38756.2| Putative methyltransferase family protein [Solanum demissum]
          Length = 828

 Score =  113 bits (282), Expect = 4e-22
 Identities = 52/102 (50%), Positives = 70/102 (68%)
 Frame = +1

Query: 4   MLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLINF 183
           MLRWMC  TR DK+RNE   E VGVA + DKLRE  LRWFGHVKRR   A +R+ +++  
Sbjct: 3   MLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAAVRRCEVMVV 62

Query: 184 DGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRI 309
           +G  R R RPK  W ++IR+D+    ++E+  L+R EW++RI
Sbjct: 63  EGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRSRI 104


>ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis]
           gi|405551390|gb|EKB47241.1| hypothetical protein
           B879_04163 [Cecembia lonarensis LW9]
          Length = 133

 Score =  112 bits (280), Expect = 8e-22
 Identities = 56/108 (51%), Positives = 72/108 (66%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLR MC  TRKDK+RNE     VGVA IE K+REN LRWFGHV+RRP  AP+R+ D   
Sbjct: 24  RMLRGMCGHTRKDKIRNEDIQGKVGVAEIEGKMRENRLRWFGHVQRRPTDAPVRRCDYGT 83

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
                R R RP+ T  + +RKD+    L+E+   +R +W++RIH+ADP
Sbjct: 84  EVRGRRGRGRPRKTLEETLRKDLEYLDLTEDMTQDRAQWRSRIHIADP 131


>ref|WP_008409321.1| hypothetical protein [Bacillus isronensis]
           gi|405383715|gb|EKB43273.1| hypothetical protein
           B857_03969 [Bacillus isronensis B3W22]
          Length = 109

 Score =  112 bits (280), Expect = 8e-22
 Identities = 55/107 (51%), Positives = 71/107 (66%)
 Frame = +1

Query: 4   MLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLINF 183
           MLRWMC  TRKDK+RNE     VGVA IE K+REN LRWFGHV+R P  APIR+ D    
Sbjct: 1   MLRWMCGHTRKDKIRNEDIRGKVGVAEIEGKMRENRLRWFGHVQRMPTDAPIRRCDYGTE 60

Query: 184 DGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
               R R RP+ T  + +RKD+    L+E+   +R +W+++IH+ADP
Sbjct: 61  VQGRRGRGRPRKTLEETLRKDLEYLDLTEDMTQDRAQWRSKIHIADP 107


>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score =  110 bits (275), Expect = 3e-21
 Identities = 55/108 (50%), Positives = 71/108 (65%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLRWMC  TRKDK+RNE     VGVA IE  +REN LRWFGHV+RRP  APIR+ D   
Sbjct: 103 RMLRWMCGHTRKDKIRNEDIRGKVGVAEIEGNMRENRLRWFGHVQRRPTYAPIRRCDYET 162

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
                R R RP+ T  + +RKD+    L+++   +R +W ++IH+ADP
Sbjct: 163 EVQGRRGRGRPRKTLEETLRKDLGYLDLTKDMTQDRAQWCSKIHIADP 210


>gb|EMT05664.1| hypothetical protein F775_16727 [Aegilops tauschii]
          Length = 650

 Score =  110 bits (274), Expect = 4e-21
 Identities = 51/108 (47%), Positives = 72/108 (66%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLRWMC   RKD+VRN+   + VG APIE+KL ++ LRWFGH++RRP  AP+    L  
Sbjct: 543 RMLRWMCGHMRKDRVRNDDIRDRVGGAPIEEKLVQHCLRWFGHIQRRPPEAPVHSGRLKR 602

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
            + + R R RP LTW + +++D+    +++E AL+R  WK  IHV +P
Sbjct: 603 AENVKRGRGRPNLTWEESVKRDLKDWSITKELALDRGAWKLAIHVPEP 650


>gb|EMT21982.1| Callose synthase 9 [Aegilops tauschii]
          Length = 2474

 Score =  108 bits (269), Expect = 1e-20
 Identities = 51/108 (47%), Positives = 72/108 (66%)
 Frame = +1

Query: 1    RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
            RMLRWMC  TRKD+ +N+   + VGVAPIE+KL ++ LRWFGH++RR   AP+    L +
Sbjct: 1141 RMLRWMCGHTRKDRFQNDDIRDRVGVAPIEEKLVQHCLRWFGHIQRRTPEAPVHSGRLKH 1200

Query: 181  FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
             D + R R RP LT W+ I +D+    +++E A++R  WK  IHV +P
Sbjct: 1201 VDNVKRGRSRPNLT-WEFIERDLKDWSITKELAIDRAAWKLAIHVPEP 1247


>ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays]
           gi|238014750|gb|ACR38410.1| unknown [Zea mays]
          Length = 215

 Score =  107 bits (266), Expect = 3e-20
 Identities = 49/108 (45%), Positives = 72/108 (66%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLRW+C  TR+D+VRN+   E VGVAPIE+KL ++ LRWFGH++RR   AP+    +  
Sbjct: 108 RMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLMQHRLRWFGHIQRRSDEAPVHIGIIRR 167

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
            + + R R RP LTW + +++D+    + +E A++R  WK  IHV +P
Sbjct: 168 PENVKRGRGRPTLTWTEAVKRDLKEWKIDKELAVDRKGWKCAIHVPEP 215


>emb|CBL94165.1| putative reverse transcriptase family member [Malus domestica]
          Length = 163

 Score =  106 bits (265), Expect = 4e-20
 Identities = 53/108 (49%), Positives = 70/108 (64%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLR MC  TRKDK+ NE     VGVA +E K+REN LRWFGHV+R P  AP+R+ +   
Sbjct: 55  RMLRGMCRHTRKDKIVNEDIRGKVGVAEVEGKMRENRLRWFGHVQRMPTDAPVRRCNYET 114

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
                R R RP+ T  + +RKD+    L+E+   NR +W++RIH+ADP
Sbjct: 115 EVRGRRGRGRPRKTLEETLRKDLEYLDLTEDMTQNRAQWRSRIHIADP 162


>gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 1
           [Triticum urartu]
          Length = 1028

 Score =  104 bits (260), Expect = 2e-19
 Identities = 48/101 (47%), Positives = 69/101 (68%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLRWMC  TRKD+VRN+   + VGVAPIE+KL ++ LRWFGH++RRP  AP+    L  
Sbjct: 660 RMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPVHSGRLKR 719

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKN 303
            + + R R RP LTW + +++D+    +++E A++R   KN
Sbjct: 720 AENVKRGRGRPNLTWEESVKRDLKDWSITKELAMDRDVSKN 760


>gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 3154

 Score =  102 bits (255), Expect = 6e-19
 Identities = 46/96 (47%), Positives = 67/96 (69%)
 Frame = +1

Query: 1    RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
            RMLRWMC  TRKD+VRN+   + VGVAPIE+KL ++ LRWFGH++RRP  AP+    L  
Sbjct: 2374 RMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPVHSGRLKR 2433

Query: 181  FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNR 288
             + + R R RP LTW + +++D+    +++E A++R
Sbjct: 2434 AENVKRGRGRPNLTWEESVKRDLKDWSITKELAMDR 2469


>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
          Length = 1770

 Score =  102 bits (253), Expect = 1e-18
 Identities = 47/92 (51%), Positives = 61/92 (66%)
 Frame = +1

Query: 13   WMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLINFDGL 192
            WM   TR D++RNE     VGVAPIEDK+RE  LRW+GHV+RRPL AP+R  + I     
Sbjct: 1213 WMSGHTRMDRIRNEVIRSKVGVAPIEDKVREGRLRWYGHVQRRPLEAPVRAWEDILIPNT 1272

Query: 193  GRVRDRPKLTWWDIIRKDMVSCGLSEETALNR 288
             R R RP++TW +++RKD++  GL E    NR
Sbjct: 1273 RRGRGRPRITWTEVVRKDILDLGLQESLISNR 1304


>gb|EMS59381.1| Phospholipid-transporting ATPase 2 [Triticum urartu]
          Length = 1134

 Score =  102 bits (253), Expect = 1e-18
 Identities = 46/96 (47%), Positives = 66/96 (68%)
 Frame = +1

Query: 1    RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
            RMLRWMC   RKD+VRN+   + VGVAPIE+KL ++ LRWFGH++RRP  AP+    L  
Sbjct: 719  RMLRWMCGHVRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPVNSGRLKR 778

Query: 181  FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNR 288
             + + R R RP LTW + +++DM    +++E A++R
Sbjct: 779  AENVKRGRGRPNLTWEESVKRDMKDWSITKELAMDR 814


>gb|EMS57239.1| hypothetical protein TRIUR3_19949 [Triticum urartu]
          Length = 505

 Score =  102 bits (253), Expect = 1e-18
 Identities = 46/98 (46%), Positives = 67/98 (68%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLRWMC  TRKD+VRN+   + VGVAPIE+KL ++ LRWFGH++RRP   P+    L  
Sbjct: 174 RMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHCLRWFGHIQRRPPETPVHSGRLKR 233

Query: 181 FDGLGRVRDRPKLTWWDIIRKDMVSCGLSEETALNRTE 294
            + + R R RP LTW + +++D+    +++E A++R E
Sbjct: 234 AENVKRGRGRPNLTWEESVKRDLKDWSITKELAMDRVE 271


>emb|CDJ93072.1| RNA-directed DNA polymerase (reverse transcriptase) domain
           containing protein [Haemonchus contortus]
          Length = 289

 Score =  101 bits (252), Expect = 1e-18
 Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
 Frame = +1

Query: 1   RMLRWMCDKTRKDKVRNEYF*ETVGVAPIEDKLRENHLRWFGHVKRRPLGAPIRKSDLIN 180
           RMLRW C  TR D++RNE     + +AP++ K+RE  LRWFGHV RRP   PIRK+  + 
Sbjct: 178 RMLRWTCGWTRLDRIRNEAVRTVMQIAPVQLKMREQRLRWFGHVLRRPQSHPIRKA--ME 235

Query: 181 FDGLG-RVRDRPKLTWWDIIRKDMVSCGLSEETALNRTEWKNRIHVADP 324
           F+    R R  PK  W D+I+KD+    ++ E A+NR +W+  I  ADP
Sbjct: 236 FEAQDKRPRGAPKKRWRDVIKKDLAEAKVTAEDAVNRMKWRRLIRTADP 284