BLASTX nr result
ID: Ephedra27_contig00001001
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00001001
(1740 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006838087.1| hypothetical protein AMTR_s00106p00017820 [A... 422 e-115
gb|EOY32064.1| RNA polymerase II ctd phosphatase, putative isofo... 393 e-106
ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ... 392 e-106
gb|EMJ05544.1| hypothetical protein PRUPE_ppa005647mg [Prunus pe... 389 e-105
ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma... 387 e-105
ref|XP_002324547.2| hypothetical protein POPTR_0018s11760g [Popu... 385 e-104
ref|XP_001781984.1| predicted protein [Physcomitrella patens] gi... 383 e-103
ref|XP_004962192.1| PREDICTED: RNA polymerase II C-terminal doma... 382 e-103
ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [S... 382 e-103
ref|XP_004242583.1| PREDICTED: RNA polymerase II C-terminal doma... 380 e-102
ref|XP_006343662.1| PREDICTED: RNA polymerase II C-terminal doma... 380 e-102
ref|XP_004242582.1| PREDICTED: RNA polymerase II C-terminal doma... 379 e-102
ref|XP_004287124.1| PREDICTED: RNA polymerase II C-terminal doma... 377 e-102
dbj|BAB08870.1| unnamed protein product [Arabidopsis thaliana] 376 e-101
ref|NP_001078764.1| C-terminal domain phosphatase-like 4 [Arabid... 376 e-101
ref|XP_006486243.1| PREDICTED: RNA polymerase II C-terminal doma... 374 e-101
ref|XP_002324546.2| hypothetical protein POPTR_0018s11760g [Popu... 372 e-100
ref|XP_002965594.1| hypothetical protein SELMODRAFT_167775 [Sela... 371 e-100
ref|XP_002864543.1| hypothetical protein ARALYDRAFT_332090 [Arab... 370 e-100
gb|EOY32065.1| RNA polymerase II ctd phosphatase, putative isofo... 368 5e-99
>ref|XP_006838087.1| hypothetical protein AMTR_s00106p00017820 [Amborella trichopoda]
gi|548840545|gb|ERN00656.1| hypothetical protein
AMTR_s00106p00017820 [Amborella trichopoda]
Length = 486
Score = 422 bits (1086), Expect = e-115
Identities = 222/472 (47%), Positives = 310/472 (65%), Gaps = 18/472 (3%)
Frame = -1
Query: 1584 ELDSISNAS-ENHQDDDDQEFESSPD-----------IDFDSEDRPRIKRRKLYDNEESE 1441
E D +SN+S E+ + D+D E + + D++ + RIKR K+ ++EE +
Sbjct: 22 ETDLLSNSSGESPERDEDILDEITSESVSERSAVWDSTDYEEIELERIKRPKICEDEEIK 81
Query: 1440 EQLPI-----KIEDKPESSSARGCL-HPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIH 1279
E ++++ ES+S + C HPG+ +CI+CG+ K D +++ V YIH
Sbjct: 82 ESQSSNANQGELDNFKESTSEKVCPPHPGFYKDMCIRCGEQKDDETVARKETAVAFNYIH 141
Query: 1278 KEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISSTYLV 1099
K+ +L E+ARLR DLK++ +K LNS R +DV PEEE+Y+++TYL
Sbjct: 142 KDLKLGAEEVARLRATDLKNLYRRRKLYLVLDLDHTLLNSTRLVDVSPEEEAYLNATYL- 200
Query: 1098 GQRNVESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMA 919
+ S +GD TL+KL +HM TKLRPFV FL+EAN M+EMY+YTMGERAYA +MA
Sbjct: 201 -NKETSSSNGDTSGTLFKLEPLHMLTKLRPFVRTFLKEANTMFEMYVYTMGERAYALEMA 259
Query: 918 KLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVER 739
KLLDP G +F R+IS DST R QK LDVVLG+E AVVILDDTE VW KHK NL+++ER
Sbjct: 260 KLLDPSGVYFGSRVISQGDSTVRHQKGLDVVLGSECAVVILDDTEHVWHKHKENLVLMER 319
Query: 738 YHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCF 559
YHFF +SC QF+ KSL++ KRDE+ES+G L+ +L VL+ +HQ F+ + + F
Sbjct: 320 YHFFSSSCRQFNVHYKSLSELKRDESESDGMLASILNVLKHIHQMFY-----YQEVETDF 374
Query: 558 DSRDVRLVLKEIRARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLREDVTH 379
+ DVR VLK I++ +LK C++VFSR+FP+ + E LWR+AE+LGA CS L E VTH
Sbjct: 375 NGSDVRKVLKTIQSEVLKGCRLVFSRIFPTNYPVENQTLWRIAEQLGASCSKELDEAVTH 434
Query: 378 VVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQSS 223
VVSLD GT+K+RWA+Q LV+P W+EA+++ W+RQ ED+FP+ K+ S
Sbjct: 435 VVSLDLGTEKARWAIQRKKHLVNPGWLEATNYFWKRQPEDQFPIPSKNGGGS 486
>gb|EOY32064.1| RNA polymerase II ctd phosphatase, putative isoform 1 [Theobroma
cacao]
Length = 469
Score = 393 bits (1010), Expect = e-106
Identities = 224/461 (48%), Positives = 284/461 (61%), Gaps = 7/461 (1%)
Frame = -1
Query: 1590 DFELDSISNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIK-IED 1414
D E D +N N DDD D DS+ R K KL D EES IED
Sbjct: 38 DVEADGDNNNDNNDDHDDDD--------DLDSQRNKRCKTEKLEDLEESRGSTSQGLIED 89
Query: 1413 K----PESSSARG-CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEI 1249
K E S + C HPG +CI CGQ D +S V YIHK L + EI
Sbjct: 90 KIVIHAELSLKKDICTHPGSFGQMCILCGQRLDD------ESGVTFGYIHKGLRLGNDEI 143
Query: 1248 ARLRKDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISSTYLVGQRNVESESG 1069
RLR D+K++L KK LNS + + + P+EE YL GQ +
Sbjct: 144 VRLRSTDMKNLLRHKKLYLVLDLDHTLLNSTQLMHLTPDEE------YLKGQSD---SLQ 194
Query: 1068 DIGR-TLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKF 892
D+ R +L+ L MHM TKLRPFV FL+EA++M+EMYIYTMG+R YA +MAKLLDP+ ++
Sbjct: 195 DVSRGSLFMLDFMHMMTKLRPFVRTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPRREY 254
Query: 891 FADRIISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCL 712
F+DR+IS D T + QK LDVVLG ESAVVILDDTE W KHK NLI++ERYH+F +SC
Sbjct: 255 FSDRVISRDDGTQKHQKGLDVVLGQESAVVILDDTENAWMKHKDNLILMERYHYFASSCH 314
Query: 711 QFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVL 532
QF KSL+Q K DE+E +G L+ +L+ LR +H FFD + SRDVR VL
Sbjct: 315 QFGYKCKSLSQLKSDESEPDGALASVLKALRQIHHMFFDELDCN------LASRDVRQVL 368
Query: 531 KEIRARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTD 352
K ++ +LK CK+VFS VFP+ F AE+H LW++AE+LGA CST VTHVVS DAGT+
Sbjct: 369 KTVQEEVLKGCKIVFSHVFPTNFPAESHPLWKMAEQLGATCSTETDLSVTHVVSTDAGTE 428
Query: 351 KSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQ 229
KSRWAV+ FLVHP WIEA+++LWQ+Q E+ FPV++ +Q
Sbjct: 429 KSRWAVKEKKFLVHPRWIEATNYLWQKQPEENFPVSQGKNQ 469
>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
phosphatase, putative [Ricinus communis]
Length = 478
Score = 392 bits (1006), Expect = e-106
Identities = 217/470 (46%), Positives = 296/470 (62%), Gaps = 18/470 (3%)
Frame = -1
Query: 1596 LIDFELDSISNASEN-------------HQDDDDQEFESSPDIDFDSEDRP-RIKRRK-- 1465
L+D ELDS S++S++ + D +++E E D D DS+ RIKR +
Sbjct: 23 LLDAELDSKSSSSDSSPKAIKHDDASDANDDVNEEEEEEESDSDDDSDIATNRIKRSRVE 82
Query: 1464 -LYDNEESEEQLPIKIEDKPESSSAR-GCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCL 1291
L + E +E + ++ +SS++ C HPG +CI CG E +++ V
Sbjct: 83 TLENGENPKESTRVSLDQTLVASSSKVACTHPGSFGDMCILCG------ERLIEETGVTF 136
Query: 1290 KYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISS 1111
YIHK L++ EI RLR D+K++L +K LNS + + + EEE
Sbjct: 137 GYIHKGLRLANDEIVRLRNTDMKNLLRHRKLYLVLDLDHTLLNSTQLMHLTAEEE----- 191
Query: 1110 TYLVGQRNVESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYA 931
YL Q ++S +L+ + MHM TKLRPF+ FL+EA+QM+EMYIYTMG+RAYA
Sbjct: 192 -YLKSQ--IDSMQDVSNGSLFMVDFMHMMTKLRPFIRTFLKEASQMFEMYIYTMGDRAYA 248
Query: 930 EKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLI 751
+MAK LDP ++F R+IS D T R QK LD+VLG ESAV+ILDDTE W KHK NLI
Sbjct: 249 LEMAKFLDPGREYFNARVISRDDGTQRHQKGLDIVLGQESAVLILDDTENAWTKHKDNLI 308
Query: 750 VVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMS 571
++ERYHFF +SC QF KSL+Q K DE ES+G L+ +L+VLR +H FFD + +
Sbjct: 309 LMERYHFFASSCRQFGFECKSLSQLKSDENESDGALASVLKVLRRIHHIFFDELED---- 364
Query: 570 QFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLRE 391
D RDVR VL +R +LK CK+VFSRVFP+QF+A+ HHLW++AE+LGA CS +
Sbjct: 365 --AIDGRDVRQVLSTVRKDVLKGCKIVFSRVFPTQFQADNHHLWKMAEQLGATCSREVDP 422
Query: 390 DVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTK 241
VTHVVS +AGT+KSRWA++ND FLVHP WIEA++++WQRQ E+ F V +
Sbjct: 423 SVTHVVSAEAGTEKSRWALKNDKFLVHPRWIEATNYMWQRQPEENFSVNQ 472
>gb|EMJ05544.1| hypothetical protein PRUPE_ppa005647mg [Prunus persica]
Length = 449
Score = 389 bits (998), Expect = e-105
Identities = 216/436 (49%), Positives = 283/436 (64%), Gaps = 9/436 (2%)
Frame = -1
Query: 1521 SSPD--IDFDSEDRPR--IKRRKLYD----NEESEEQLPIKIEDKPESSSARG-CLHPGY 1369
SSPD D++S+D KRRK+ + +E I +E+ E+S + C HPG
Sbjct: 31 SSPDEEADYESDDGSERSTKRRKVENLGSIDETQGSTSQIFVEENSEASPKKDICTHPGS 90
Query: 1368 MWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXX 1189
+ +CI CGQ +++S V L YIHK+F L++ EI R+R D+K L KK
Sbjct: 91 VKDLCIVCGQRV------DEKSGVPLGYIHKDFWLNNDEIDRVRSTDIKKSLHLKKLYLV 144
Query: 1188 XXXXXXXLNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRTLYKLPSMHMWTKLRP 1009
LNS + EEE YL Q + + D +L+++ MHM TKLRP
Sbjct: 145 LDLDHTLLNSTHLNHMTAEEE------YLHSQTDSLQDVSD--GSLFRVDVMHMMTKLRP 196
Query: 1008 FVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDV 829
FV KFL+EA++M+EMYIYTMGERAYA +MAKLLDP+ ++F DR+IS D T + QK LDV
Sbjct: 197 FVRKFLKEASEMFEMYIYTMGERAYALEMAKLLDPRKEYFGDRVISRDDGTQKHQKGLDV 256
Query: 828 VLGTESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTKSLTQSKRDEAESEG 649
VLG ESA +ILDDTE W KHK NLI++ERYHFF +SC QF KSL++ K DE+E EG
Sbjct: 257 VLGHESAALILDDTENAWTKHKDNLILMERYHFFRSSCHQFGFHCKSLSELKSDESEPEG 316
Query: 648 TLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPS 469
L+ +L+VL+ +H FF + + RDVR VLK +R ILK CK+VFSRVFPS
Sbjct: 317 ALATVLEVLKRIHNMFFYESKDNLI------DRDVRQVLKTLRKEILKGCKIVFSRVFPS 370
Query: 468 QFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEAS 289
+F+AE H LW++AE+LGA CST L VTHVVS DAGT+KSRWAV+ FLVHP WIEAS
Sbjct: 371 KFQAENHQLWKMAEQLGATCSTELDLSVTHVVSTDAGTEKSRWAVKEKKFLVHPQWIEAS 430
Query: 288 SFLWQRQSEDRFPVTK 241
+++W +Q+ED+FPV +
Sbjct: 431 NYMWLKQAEDKFPVNQ 446
>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Cucumis sativus]
Length = 452
Score = 387 bits (995), Expect = e-105
Identities = 208/438 (47%), Positives = 281/438 (64%), Gaps = 5/438 (1%)
Frame = -1
Query: 1545 DDDDQEFESSPDIDFDSEDRP---RIKRRKLYDNEESEEQLPIKIEDKPES--SSARGCL 1381
D D +SSPD + + ++ RIKRRK+ E SEE + ++E++ S + C
Sbjct: 24 DLDSHSSDSSPDEETEGDNNAESVRIKRRKVEKLENSEEDIMHEVEEQSLEVLSKQQLCS 83
Query: 1380 HPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRKDDLKSVLSAKK 1201
HPG +CI CGQ +++S V YIHKE L++ EI R+R ++K +L KK
Sbjct: 84 HPGSFGNMCIICGQRL------DEESGVTFGYIHKELRLNNDEINRMRNKEMKELLQRKK 137
Query: 1200 XXXXXXXXXXXLNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRTLYKLPSMHMWT 1021
LNS + EEE S T +S +L+ L S+H T
Sbjct: 138 LILVLDLDHTLLNSTELRYLTVEEEYLRSQT--------DSLDDVTKGSLFLLNSVHTMT 189
Query: 1020 KLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIISSSDSTNRRQK 841
KLRPFVH FL+EA++++EMYIYTMGER YA +MAKLLDPK ++F+ ++IS D T + QK
Sbjct: 190 KLRPFVHSFLKEASKLFEMYIYTMGERRYAFEMAKLLDPKKEYFSSKVISRDDGTQKHQK 249
Query: 840 DLDVVLGTESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTKSLTQSKRDEA 661
LDVVLG ESAV+ILDDTE W KHK NLI++ERYHFF +SC QF KSL++ K DE+
Sbjct: 250 GLDVVLGKESAVLILDDTENAWTKHKENLILMERYHFFASSCRQFGFNCKSLSELKNDES 309
Query: 660 ESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRARILKDCKVVFSR 481
E++G L+ +L+VL+ VH FF+ +S + RDVR VLK +RA +L+ CKVVFSR
Sbjct: 310 ETDGALTTILKVLKQVHHMFFNEVSGDLV------DRDVRQVLKTVRAEVLEGCKVVFSR 363
Query: 480 VFPSQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAVQNDCFLVHPSW 301
VFP++F+AE H LW++ E+LG CST L + VTHVV+ DAGT+KSRWA++ FLVHP W
Sbjct: 364 VFPTKFQAENHQLWKMVEQLGGTCSTELDQSVTHVVATDAGTEKSRWALKEKKFLVHPRW 423
Query: 300 IEASSFLWQRQSEDRFPV 247
IEAS++ W+RQ E+ F V
Sbjct: 424 IEASNYFWKRQMEENFTV 441
>ref|XP_002324547.2| hypothetical protein POPTR_0018s11760g [Populus trichocarpa]
gi|550318538|gb|EEF03112.2| hypothetical protein
POPTR_0018s11760g [Populus trichocarpa]
Length = 472
Score = 385 bits (990), Expect = e-104
Identities = 221/466 (47%), Positives = 291/466 (62%), Gaps = 19/466 (4%)
Frame = -1
Query: 1593 IDFELDSISNASENHQDD------DDQEFESSPDIDFDSED-------RPRIKRRKLYDN 1453
+D ELDS S+AS D+ D SSPD D ++E+ R R+KR K+
Sbjct: 21 LDTELDSKSSASSASDDEAPNQRHSDSAASSSPDQDKEAEEDDDSDFQRKRVKRSKVETV 80
Query: 1452 EESEEQLPI----KIEDKPESSSARG-CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLK 1288
E E+ ++ E+S ++ C HPG +CI CGQ + +S V
Sbjct: 81 EIVEDDGGTTSFASLKHNSEASISKEICTHPGSFGTMCIVCGQLL------DGESGVTFG 134
Query: 1287 YIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISST 1108
YIHK L + EI RLR D+K++L KK LNS + + + +EE
Sbjct: 135 YIHKGLRLGNDEIVRLRNTDMKNLLRHKKLYLILDLDHTLLNSTQLMHMTLDEE------ 188
Query: 1107 YLVGQRNVESESGDIGR-TLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYA 931
YL GQ + D+ + +L+ L SM M TKLRPFV FL+EA+QM+EMYIYTMG+RAYA
Sbjct: 189 YLNGQTD---SLQDVSKGSLFMLSSMQMMTKLRPFVRTFLKEASQMFEMYIYTMGDRAYA 245
Query: 930 EKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLI 751
+MAKLLDP ++F ++IS D T R QK LDVVLG ESAV+ILDDTE W KHK NLI
Sbjct: 246 LEMAKLLDPGREYFNAKVISRDDGTQRHQKGLDVVLGQESAVLILDDTENAWMKHKDNLI 305
Query: 750 VVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMS 571
++ERYHFF +SC QF KSL++ K DE+ESEG L+ +L+VLR +HQ FF+ +
Sbjct: 306 LMERYHFFASSCHQFGFNCKSLSEQKTDESESEGALASILKVLRKIHQIFFEELEEN--- 362
Query: 570 QFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLRE 391
D RDVR VLK +R +LK CK+VFSRVFP+Q +A+ HHLWR+AE+LGA CST L
Sbjct: 363 ---MDGRDVRQVLKTVRKDVLKGCKIVFSRVFPTQSQADNHHLWRMAEQLGATCSTELDP 419
Query: 390 DVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRF 253
VTHVVS D+GT+KS WA++++ FLV P WIEA+++ WQRQ E+ F
Sbjct: 420 SVTHVVSKDSGTEKSHWALKHNKFLVQPGWIEAANYFWQRQPEENF 465
>ref|XP_001781984.1| predicted protein [Physcomitrella patens] gi|162666557|gb|EDQ53208.1|
predicted protein [Physcomitrella patens]
Length = 563
Score = 383 bits (984), Expect = e-103
Identities = 212/471 (45%), Positives = 293/471 (62%), Gaps = 6/471 (1%)
Frame = -1
Query: 1584 ELDSISNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIKIEDKPE 1405
+L+ ++ + + ++D D ES D + D ++ E S++ PI + E
Sbjct: 63 DLEEGTSENGSVEEDADSVVESEDHADDNHLDVEKVA-------ESSDDITPICVNYSGE 115
Query: 1404 SSSARGCL-HPGYMWGVCIKCGQNKPDSEENEQQ-SRVCLKYIHKEFELSDSEIARLRKD 1231
++ C HPG++W VCI+CG+ K + N+ RV L+YIH+ E+S+ E AR+R
Sbjct: 116 MVNSNKCPPHPGFIWDVCIRCGKRKSTAPSNDPVIDRVGLRYIHEGLEVSELEAARVRNA 175
Query: 1230 DLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRTL 1051
+L+ V +K LNSARF +V EE Y+ T+ GQ++ S L
Sbjct: 176 ELRRVTGKQKLLLVVDLDHTMLNSARFSEVPAEERIYL--TWTAGQQHGRVSS------L 227
Query: 1050 YKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIIS 871
++L + MWTKLRPF HKFLEEA+++YEMY+YTMGE+ YA+ MA+LLDP G+ F RIIS
Sbjct: 228 HQLTKLGMWTKLRPFAHKFLEEASKLYEMYVYTMGEKIYAQAMAELLDPTGQLFGGRIIS 287
Query: 870 SSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTK 691
+DST R KDLDVVLG ESAVVILDDTE VWP H+SNLI++ERYHFF +SC QF
Sbjct: 288 QTDSTKRHTKDLDVVLGAESAVVILDDTEAVWPNHRSNLILMERYHFFTSSCHQFRVRAP 347
Query: 690 SLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQF-CFDSRDVRLVLKEIRAR 514
SL Q RDE E +GTL+ L+ L+++H FF+ K M + + DVR V++ IR +
Sbjct: 348 SLAQMHRDECEIDGTLATTLKTLQAIHHEFFNGHKGKSMKRRPPLELPDVRDVIRSIRGK 407
Query: 513 ILKDCKVVFSRVFPSQFR-AETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWA 337
+L C +VFSR+FP+ + E H W+LA ELGA CST THVV+LD GTDK+RWA
Sbjct: 408 LLSGCHIVFSRIFPTGLQNPEFHPFWQLAVELGARCSTVCDHTTTHVVALDRGTDKARWA 467
Query: 336 VQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQ--SSGFVESVSQLPL 190
Q+ LVHP W+EA+S+LW+R E FPVT S S+ F +++S P+
Sbjct: 468 KQHGISLVHPRWVEAASYLWKRPREKDFPVTDDASALISTTFSKNISVEPI 518
>ref|XP_004962192.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Setaria italica]
Length = 543
Score = 382 bits (982), Expect = e-103
Identities = 213/472 (45%), Positives = 290/472 (61%), Gaps = 14/472 (2%)
Frame = -1
Query: 1596 LIDFELDSISNA---------SENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEES 1444
L+D EL+ S A S + DD+ E E S +++ + ++ KRR++ E+S
Sbjct: 23 LLDSELELASGADSAFPGDPSSASPDTDDEGEDEDSEEVEVELLEQNSAKRRRV--EEQS 80
Query: 1443 EEQ----LPIKIEDKPESS-SARGCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIH 1279
++Q P KI P + C HPGY G+C +CG KP EE+ S V YIH
Sbjct: 81 QDQGTSIRPDKIATGPSKNVQVEVCPHPGYFGGLCFRCG--KPQDEEDA--SGVAFGYIH 136
Query: 1278 KEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISSTYLV 1099
K L SEI RLR DLK++L +K +NS + D+ E +
Sbjct: 137 KGLRLGTSEIDRLRGADLKNLLRERKLVLILDLDHTLINSTKLQDISSAENE-------L 189
Query: 1098 GQRNVESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMA 919
G R + D R+++ L SM M TKLRPFV FL+EA+ M+EMYIYTMG++AYA ++A
Sbjct: 190 GIRTAALKD-DPDRSIFSLDSMQMLTKLRPFVRNFLKEASNMFEMYIYTMGDKAYAIEIA 248
Query: 918 KLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVER 739
KLLDP +F ++IS+SD T R QK LDV+LG ES VILDDTE VW KHK NLI++ER
Sbjct: 249 KLLDPSNVYFPSKVISNSDCTQRHQKGLDVILGAESVAVILDDTEYVWQKHKENLILMER 308
Query: 738 YHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCF 559
YH+F +SC QF G KSL++S +DE ES+G L+ +L VL+ +H FFD +S
Sbjct: 309 YHYFASSCRQFGFGVKSLSESMQDERESDGALATVLDVLKRIHTIFFDTAVETALS---- 364
Query: 558 DSRDVRLVLKEIRARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLREDVTH 379
SRDVR V+K +R +L+ CK+VFSRVFP+ R + +W++AE LGA+CST + VTH
Sbjct: 365 -SRDVRQVIKTVRKEVLEGCKLVFSRVFPNTSRPQEQMMWKMAEHLGAVCSTDVDSTVTH 423
Query: 378 VVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQSS 223
VV++D GT+K+RWAV+N FLVHP WIEA++F W RQ E+ FPV +S+
Sbjct: 424 VVAVDLGTEKARWAVKNKKFLVHPRWIEAANFRWHRQPEEDFPVIPPKEKST 475
>ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [Sorghum bicolor]
gi|241915584|gb|EER88728.1| hypothetical protein
SORBIDRAFT_10g025580 [Sorghum bicolor]
Length = 558
Score = 382 bits (982), Expect = e-103
Identities = 205/460 (44%), Positives = 288/460 (62%), Gaps = 4/460 (0%)
Frame = -1
Query: 1569 SNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIKIEDKPESSS-- 1396
S+A DD+D++ + D + ++ ++ KRR++ + + ++ ++ + P +S
Sbjct: 43 SSAFPAATDDEDEDEDEDEDPEVEAVEQNGTKRRRV-EEQLQDQGTSVRPDKIPTGASKN 101
Query: 1395 --ARGCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRKDDLK 1222
C HPGY G+C +CG KP EEN S V YIHK L SEI RLR DLK
Sbjct: 102 VQVEACPHPGYFGGLCFRCG--KPQDEENV--SGVAFGYIHKGLRLGTSEIDRLRGADLK 157
Query: 1221 SVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRTLYKL 1042
++L +K +NS + D+ E+ +G + S+ D R+++ L
Sbjct: 158 NLLRERKLVLILDLDHTLINSTKLQDISSAEKD-------LGIQTAASKD-DPNRSIFSL 209
Query: 1041 PSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIISSSD 862
SM M TKLRPFV +FL+EA+ M+EMYIYTMG++AYA ++AKLLDP +F ++IS+SD
Sbjct: 210 DSMQMLTKLRPFVREFLKEASNMFEMYIYTMGDKAYAIEIAKLLDPSNIYFPSKVISNSD 269
Query: 861 STNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTKSLT 682
T R QK LDV+LG ES VILDDTE VW KHK NLI++ERYHFF +SC QF G +SL+
Sbjct: 270 CTQRHQKGLDVILGAESVAVILDDTEYVWQKHKENLILMERYHFFASSCRQFGFGVRSLS 329
Query: 681 QSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRARILKD 502
+S +DE ES+G L+ +L VL+ +H FFD ++S S+DVR V+K +R IL+
Sbjct: 330 ESMQDERESDGALATVLDVLKRIHSIFFDLAVETDLS-----SQDVRQVIKAVRKEILQG 384
Query: 501 CKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAVQNDC 322
CK+VFSRVFP+ R + LW++AE LGA+CST + VTHVV++D GT+K+RW V N
Sbjct: 385 CKIVFSRVFPNNTRPQEQMLWKMAEHLGAVCSTDVDSSVTHVVTVDLGTEKARWGVANKK 444
Query: 321 FLVHPSWIEASSFLWQRQSEDRFPVTKKDSQSSGFVESVS 202
FLVHP WIEA++F W RQ E+ FPVT +S +V+
Sbjct: 445 FLVHPRWIEAANFRWHRQPEEDFPVTAPKEKSRDIDNAVA 484
>ref|XP_004242583.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Solanum lycopersicum]
Length = 472
Score = 380 bits (976), Expect = e-102
Identities = 218/472 (46%), Positives = 292/472 (61%), Gaps = 22/472 (4%)
Frame = -1
Query: 1593 IDFELDSISNAS------ENHQDDDDQEFESSPDIDFDSE---------DRPRIKRRKLY 1459
+D ELDS S+ S EN + + + E E D D++ D R K+RK+
Sbjct: 21 LDAELDSASDVSPELDEVENGEAEVEVELEDEKGKDEDNDTGDGDDGNIDSRRSKKRKIE 80
Query: 1458 DNEESEEQLPIKIEDKPESSSARG-------CLHPGYMWGVCIKCGQNKPDSEENEQQSR 1300
E + + P + + ES+ G C HPG M G+CI+CGQ D +S
Sbjct: 81 LIEAAVD--PQSLVSRGESAETSGASLALDVCTHPGVMGGMCIRCGQKVED------ESG 132
Query: 1299 VCLKYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESY 1120
V YIHK L+D E+ARLR+ DLK++L +K LNS R D+ EE
Sbjct: 133 VAFGYIHKNLRLADDEVARLREKDLKNLLRHRKLILVLDLDHTLLNSTRLADISAEE--- 189
Query: 1119 ISSTYLVGQRNVESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGER 940
+YL QR V ++ + L+KL +HM TKLRPFVH FL+EA+ ++EMYIYTMGER
Sbjct: 190 ---SYLKDQREVLPDA--LRSNLFKLDWIHMMTKLRPFVHTFLKEASSLFEMYIYTMGER 244
Query: 939 AYAEKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKS 760
YA +MAKLLDP G +F R+I+ SDST R QK LDVVLG ESAV+ILDDTE VW KH+
Sbjct: 245 PYALEMAKLLDPGGIYFHSRVIAQSDSTRRHQKGLDVVLGQESAVLILDDTEVVWGKHRE 304
Query: 759 NLIVVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNK 580
NLI+++RYHFF +SC QF KSL++ K DE E+EG L+ +L+VL+ +H+ FFD
Sbjct: 305 NLILMDRYHFFTSSCRQFGLKCKSLSEQKSDENEAEGALASVLEVLQRIHRLFFDPERGD 364
Query: 579 EMSQFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTS 400
+ + RDVR VLK +R ILK CK+VF+ V P Q + E H+ W+LAE+LGA ST
Sbjct: 365 NIME-----RDVRQVLKTVRKEILKGCKIVFTGVIPIQCQPENHYYWKLAEKLGATFSTE 419
Query: 399 LREDVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVT 244
+ E VTHVVS++ T+KSR AV+ FLVHP WIEA+++LW++ E+ FPV+
Sbjct: 420 VDESVTHVVSMNDKTEKSRQAVREKKFLVHPRWIEAANYLWRKPPEENFPVS 471
>ref|XP_006343662.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Solanum tuberosum]
Length = 478
Score = 380 bits (975), Expect = e-102
Identities = 218/475 (45%), Positives = 288/475 (60%), Gaps = 25/475 (5%)
Frame = -1
Query: 1593 IDFELDSISNAS------ENHQDDDDQEFESSP--------------DIDFDSEDRPRIK 1474
+D ELDS S+ S EN + + ++E E D D S D R K
Sbjct: 22 LDAELDSASDVSPELDEVENGEAEGEEEVEDEKGQDEGNDTGDGDDDDDDDGSIDSSRSK 81
Query: 1473 RRKLYDNEESEEQLPIKIEDKPESSSARG-----CLHPGYMWGVCIKCGQNKPDSEENEQ 1309
+RK+ E + + +P +S C HPG M G+CI+CGQ D
Sbjct: 82 KRKIELIEAAVDPQSSVSRGEPAETSGASLALDVCTHPGVMGGMCIRCGQKVED------ 135
Query: 1308 QSRVCLKYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEE 1129
+S V YIHK L+D E+ARLR DLK++L KK LNS R D+ EE
Sbjct: 136 ESGVAFGYIHKNLRLADDEVARLRDKDLKNLLRHKKLILVLDLDHTLLNSTRLADISAEE 195
Query: 1128 ESYISSTYLVGQRNVESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTM 949
+YL QR V ++ + L+KL +HM TKLRPFVH FL+EA+ ++EMYIYTM
Sbjct: 196 ------SYLKDQREVLPDA--LRNNLFKLDWIHMMTKLRPFVHTFLKEASSLFEMYIYTM 247
Query: 948 GERAYAEKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPK 769
GER YA +MA LLDP G +F R+I+ SDST R QK LDVVLG ESAV+ILDDTE VW K
Sbjct: 248 GERPYALEMASLLDPGGIYFHSRVIAQSDSTRRHQKGLDVVLGQESAVLILDDTEVVWGK 307
Query: 768 HKSNLIVVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNI 589
H+ NLI+++RYHFF +SC QF KSL++ K DE E+EG L+ +L+VL+ +H+ FFD
Sbjct: 308 HRENLILMDRYHFFTSSCRQFGLKCKSLSEQKSDENEAEGALASVLEVLQRIHRLFFDLE 367
Query: 588 SNKEMSQFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAIC 409
+ + RDVR VLK +R ILK CK+VF+ V P Q + E HH W+LAE+LGA
Sbjct: 368 RGDNIME-----RDVRQVLKTVRKEILKGCKIVFTGVIPIQCQPENHHYWKLAEKLGATF 422
Query: 408 STSLREDVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVT 244
ST + E VTHVVS++ T+KSR A++ FLVHPSWIEA+++LW++ E+ FPV+
Sbjct: 423 STEVDESVTHVVSMNDKTEKSRQALREKKFLVHPSWIEAANYLWRKPPEENFPVS 477
>ref|XP_004242582.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Solanum lycopersicum]
Length = 512
Score = 379 bits (973), Expect = e-102
Identities = 215/460 (46%), Positives = 288/460 (62%), Gaps = 10/460 (2%)
Frame = -1
Query: 1593 IDFELDSISNASE----NHQDDDDQEFESSPDIDFD-SEDRPRIKRRKLYDNEESEEQLP 1429
+D ELDS S+ E + +++ E E + D D S D R K+RK+ E + +
Sbjct: 71 LDAELDSASDVDEVESGEAEGEEEVEDEDNDTGDGDGSIDSSRSKKRKIELIEGAVDPQS 130
Query: 1428 IKIEDKPESSSARG-----CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFEL 1264
+P +S C HPG M G+CI+CGQ D +S V YIHK L
Sbjct: 131 SVSRGEPAETSGASMALDVCTHPGVMGGMCIRCGQKVED------ESGVAFGYIHKNLRL 184
Query: 1263 SDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISSTYLVGQRNV 1084
+D E+ARLR+ DLK++L +K LNS R D+ EE +YL QR V
Sbjct: 185 ADDEVARLREKDLKNLLRHRKLILVLDLDHTLLNSTRLADISAEE------SYLKDQREV 238
Query: 1083 ESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDP 904
++ + L+KL +HM TKLRPFVH FL+EA+ ++EMYIYTMGER YA +MAKLLDP
Sbjct: 239 LPDA--LRSNLFKLDWIHMMTKLRPFVHTFLKEASSLFEMYIYTMGERPYALEMAKLLDP 296
Query: 903 KGKFFADRIISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVERYHFFH 724
G +F R+I+ SDST R QK LDVVLG ESAV+ILDDTE VW KH+ NLI+++RYHFF
Sbjct: 297 GGIYFHSRVIAQSDSTRRHQKGLDVVLGQESAVLILDDTEVVWGKHRENLILMDRYHFFT 356
Query: 723 ASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDV 544
+SC QF KSL++ K DE E+EG L+ +L+VL+ +H+ FFD + + RDV
Sbjct: 357 SSCRQFGLKCKSLSEQKSDENEAEGALASVLEVLQRIHRLFFDPERGDNIME-----RDV 411
Query: 543 RLVLKEIRARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLD 364
R VLK +R ILK CK+VF+ V P Q + E H+ W+LAE+LGA ST + E VTHVVS++
Sbjct: 412 RQVLKTVRKEILKGCKIVFTGVIPIQCQPENHYYWKLAEKLGATFSTEVDESVTHVVSMN 471
Query: 363 AGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVT 244
T+KSR AV+ FLVHP WIEA+++LW++ E+ FPV+
Sbjct: 472 DKTEKSRQAVREKKFLVHPRWIEAANYLWRKPPEENFPVS 511
>ref|XP_004287124.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Fragaria vesca subsp. vesca]
Length = 464
Score = 377 bits (969), Expect = e-102
Identities = 212/462 (45%), Positives = 289/462 (62%), Gaps = 11/462 (2%)
Frame = -1
Query: 1593 IDFELDSISNASENHQD------DDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQL 1432
++ EL+S S+ S ++ DDD ESS D E R+KRRK+ + E EE
Sbjct: 20 LETELESGSSESSPDEECKAAVGDDDGGSESS-----DVESESRVKRRKVENVEILEEAN 74
Query: 1431 PIKIEDKPES-SSARG----CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFE 1267
+ + E S A G C HPG +C CGQ + QS V YIHK
Sbjct: 75 ALTSQAVSEEISEASGVDDLCAHPGSFGDMCFLCGQRLIE------QSGVTFGYIHKGLR 128
Query: 1266 LSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISSTYLVGQRN 1087
L+D EI RLR D+K L+ KK LN+ V +EE +
Sbjct: 129 LNDGEIDRLRNTDIKKSLNNKKLYLVLDLDHTLLNTTLLNHVTAKEEYLMCPP------- 181
Query: 1086 VESESGDIGRTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLD 907
+S + +L++L M M TKLRPF+ FL+EA++++EMYIYTMG+RAYA +MAKLLD
Sbjct: 182 -DSLPDVLKDSLFRLDFMRMMTKLRPFIRTFLKEASEIFEMYIYTMGDRAYALEMAKLLD 240
Query: 906 PKGKFFADRIISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVERYHFF 727
PK ++F DR+IS D T R QK LD+VLG ESAV+ILDDTE W KHK NLI++ERYHFF
Sbjct: 241 PKKEYFGDRVISRDDGTQRHQKGLDIVLGQESAVLILDDTENAWIKHKDNLILMERYHFF 300
Query: 726 HASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRD 547
+SC QF +SL++ K DE+E EG L+ +L +L+ +H+ FF ++ + RD
Sbjct: 301 RSSCAQFGFTCESLSELKSDESEPEGALANVLDLLKRIHKMFFYDLGGNLV------DRD 354
Query: 546 VRLVLKEIRARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLREDVTHVVSL 367
VR VLK +R +L CKVVFSR+ PS+ A +HHLW++AE+LGAICST + VTHVV+L
Sbjct: 355 VRQVLKIVRKEVLNGCKVVFSRIIPSKVLASSHHLWKMAEQLGAICSTEVDSTVTHVVAL 414
Query: 366 DAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTK 241
DAGT+KSRWAV+++ FLVHP W+EA++++WQ+Q+E++FPVT+
Sbjct: 415 DAGTEKSRWAVKHNKFLVHPRWLEAANYMWQKQAEEKFPVTE 456
>dbj|BAB08870.1| unnamed protein product [Arabidopsis thaliana]
Length = 1065
Score = 376 bits (965), Expect = e-101
Identities = 202/455 (44%), Positives = 281/455 (61%)
Frame = -1
Query: 1593 IDFELDSISNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIKIED 1414
+D ELDS S+AS ++++ E + +KR+KL EE+
Sbjct: 647 LDAELDSASDASSGPSEEEEAE----------DDVESGLKRQKLEHLEEA---------- 686
Query: 1413 KPESSSARGCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRK 1234
SSS C HPG +C CGQ +++ V +YIHKE L++ EI+RLR
Sbjct: 687 ---SSSKGECEHPGSFGNMCFVCGQKL-------EETGVSFRYIHKEMRLNEDEISRLRD 736
Query: 1233 DDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRT 1054
D + + +K LN+ D+ PEEE S T+ +++ G +
Sbjct: 737 SDSRFLQRQRKLYLVLDLDHTLLNTTILRDLKPEEEYLKSHTH-----SLQDGCNVSGGS 791
Query: 1053 LYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRII 874
L+ L M M TKLRPFVH FL+EA++M+ MYIYTMG+R YA +MAKLLDPKG++F DR+I
Sbjct: 792 LFLLEFMQMMTKLRPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFGDRVI 851
Query: 873 SSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGT 694
S D T R +K LDVVLG ESAV+ILDDTE WPKHK NLIV+ERYHFF +SC QF
Sbjct: 852 SRDDGTVRHEKSLDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFSSSCRQFDHRY 911
Query: 693 KSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRAR 514
KSL++ K DE+E +G L+ +L+VL+ H FF+N+ +RDVRL+LK++R
Sbjct: 912 KSLSELKSDESEPDGALATVLKVLKQAHALFFENVDEG------ISNRDVRLMLKQVRKE 965
Query: 513 ILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAV 334
ILK CK+VFSRVFP++ + E H LW++AEELGA C+T + VTHVV++D GT+K+RWAV
Sbjct: 966 ILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVTHVVAMDVGTEKARWAV 1025
Query: 333 QNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQ 229
+ ++VH WI+A+++LW +Q E+ F + + Q
Sbjct: 1026 REKKYVVHRGWIDAANYLWMKQPEENFGLEQLKKQ 1060
>ref|NP_001078764.1| C-terminal domain phosphatase-like 4 [Arabidopsis thaliana]
gi|122154038|sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA
polymerase II C-terminal domain phosphatase-like 4;
Short=FCP-like 4; AltName: Full=Carboxyl-terminal
phosphatase-like 4; Short=AtCPL4; Short=CTD
phosphatase-like 4 gi|95115186|gb|ABF55959.1|
carboxyl-terminal phosphatase-like 4 [Arabidopsis
thaliana] gi|332009601|gb|AED96984.1| C-terminal domain
phosphatase-like 4 [Arabidopsis thaliana]
Length = 440
Score = 376 bits (965), Expect = e-101
Identities = 202/455 (44%), Positives = 281/455 (61%)
Frame = -1
Query: 1593 IDFELDSISNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIKIED 1414
+D ELDS S+AS ++++ E + +KR+KL EE+
Sbjct: 22 LDAELDSASDASSGPSEEEEAE----------DDVESGLKRQKLEHLEEA---------- 61
Query: 1413 KPESSSARGCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRK 1234
SSS C HPG +C CGQ +++ V +YIHKE L++ EI+RLR
Sbjct: 62 ---SSSKGECEHPGSFGNMCFVCGQKL-------EETGVSFRYIHKEMRLNEDEISRLRD 111
Query: 1233 DDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGRT 1054
D + + +K LN+ D+ PEEE S T+ +++ G +
Sbjct: 112 SDSRFLQRQRKLYLVLDLDHTLLNTTILRDLKPEEEYLKSHTH-----SLQDGCNVSGGS 166
Query: 1053 LYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRII 874
L+ L M M TKLRPFVH FL+EA++M+ MYIYTMG+R YA +MAKLLDPKG++F DR+I
Sbjct: 167 LFLLEFMQMMTKLRPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFGDRVI 226
Query: 873 SSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGT 694
S D T R +K LDVVLG ESAV+ILDDTE WPKHK NLIV+ERYHFF +SC QF
Sbjct: 227 SRDDGTVRHEKSLDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFSSSCRQFDHRY 286
Query: 693 KSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRAR 514
KSL++ K DE+E +G L+ +L+VL+ H FF+N+ +RDVRL+LK++R
Sbjct: 287 KSLSELKSDESEPDGALATVLKVLKQAHALFFENVDEG------ISNRDVRLMLKQVRKE 340
Query: 513 ILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAV 334
ILK CK+VFSRVFP++ + E H LW++AEELGA C+T + VTHVV++D GT+K+RWAV
Sbjct: 341 ILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVTHVVAMDVGTEKARWAV 400
Query: 333 QNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQ 229
+ ++VH WI+A+++LW +Q E+ F + + Q
Sbjct: 401 REKKYVVHRGWIDAANYLWMKQPEENFGLEQLKKQ 435
>ref|XP_006486243.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like isoform X1 [Citrus sinensis]
gi|568865772|ref|XP_006486244.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 4-like
isoform X2 [Citrus sinensis]
gi|568865774|ref|XP_006486245.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 4-like
isoform X3 [Citrus sinensis]
Length = 478
Score = 374 bits (960), Expect = e-101
Identities = 213/470 (45%), Positives = 288/470 (61%), Gaps = 13/470 (2%)
Frame = -1
Query: 1593 IDFELDSIS-------NASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQ 1435
+D ELDS S A + +D++ + E+ + D +D RIKRRK E +E+
Sbjct: 21 LDAELDSNSLGSSPEKEAEDKDEDEESIDEEAENEEARDDKDLERIKRRKTQIVETIQER 80
Query: 1434 ----LPIKIEDKPESS-SARGCLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEF 1270
L +E+K E S C HPG + G+C +CG+ E++S V YI K
Sbjct: 81 PGPTLLGNLEEKTEVSLEMDNCPHPGSLGGMCYRCGKRL------EEESGVTFSYICKGL 134
Query: 1269 ELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISSTYLVGQR 1090
L + EI RLR D+K +L +K LNS + + PEE+ YL Q
Sbjct: 135 RLGNDEIDRLRNTDMKHLLRHRKLYLILDLDHTLLNSTLLLHLTPEED------YLKSQA 188
Query: 1089 NVESESGDIGR-TLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKL 913
+ D+ + +L+ L M+M TKLRPFVH FL+EA++M+EMYIYTMG+R YA +MAKL
Sbjct: 189 D---SLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKL 245
Query: 912 LDPKGKFFADRIISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVERYH 733
LDP ++F R+IS D T R QK LDVVLG ESAV+ILDDTE W KH+ NLI++ERYH
Sbjct: 246 LDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERYH 305
Query: 732 FFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDS 553
FF +SC QF +SL+Q + DE+E EG L+ +L+VL+ +H FFD ++N
Sbjct: 306 FFASSCRQFGYHCQSLSQLRSDESELEGALASVLKVLKRIHNIFFDELAND------LAG 359
Query: 552 RDVRLVLKEIRARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLREDVTHVV 373
RDVR VLK +R +LK CK+VFS VFP++F A+TH+LW++AE+LGA C L VTHVV
Sbjct: 360 RDVRQVLKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCLIELDPSVTHVV 419
Query: 372 SLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQSS 223
S DA T+KSRWA + FLV P WIE ++FLWQRQ E+ FPV + + +
Sbjct: 420 STDARTEKSRWAAKEAKFLVDPRWIETANFLWQRQPEENFPVKQNKPEEN 469
>ref|XP_002324546.2| hypothetical protein POPTR_0018s11760g [Populus trichocarpa]
gi|550318537|gb|EEF03111.2| hypothetical protein
POPTR_0018s11760g [Populus trichocarpa]
Length = 468
Score = 372 bits (954), Expect = e-100
Identities = 218/467 (46%), Positives = 289/467 (61%), Gaps = 20/467 (4%)
Frame = -1
Query: 1593 IDFELDSISNASENHQDD------DDQEFESSPDIDFDSED-------RPRIKRRKLYDN 1453
+D ELDS S+AS D+ D SSPD D ++E+ R R+KR K+
Sbjct: 21 LDTELDSKSSASSASDDEAPNQRHSDSAASSSPDQDKEAEEDDDSDFQRKRVKRSKVETV 80
Query: 1452 EESEEQLPI----KIEDKPESSSARG-CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLK 1288
E E+ ++ E+S ++ C HPG +CI CGQ + +S V
Sbjct: 81 EIVEDDGGTTSFASLKHNSEASISKEICTHPGSFGTMCIVCGQLL------DGESGVTFG 134
Query: 1287 YIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISST 1108
YIHK L + EI RLR D+K++L KK LNS + + + +EE
Sbjct: 135 YIHKGLRLGNDEIVRLRNTDMKNLLRHKKLYLILDLDHTLLNSTQLMHMTLDEE------ 188
Query: 1107 YLVGQRNVESESGDIGR-TLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYA 931
YL GQ + D+ + +L+ L SM M TKLRPFV FL+EA+QM+EMYIYTMG+RAYA
Sbjct: 189 YLNGQTD---SLQDVSKGSLFMLSSMQMMTKLRPFVRTFLKEASQMFEMYIYTMGDRAYA 245
Query: 930 EKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLI 751
+MAKLLDP ++F ++IS D T R QK LDVVLG ESAV+ILDDTE W KHK NLI
Sbjct: 246 LEMAKLLDPGREYFNAKVISRDDGTQRHQKGLDVVLGQESAVLILDDTENAWMKHKDNLI 305
Query: 750 VVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFF-DNISNKEM 574
++ERYHFF +SC QF KSL++ K DE+ESEG L+ +L+VLR +HQ FF D+I + +
Sbjct: 306 LMERYHFFASSCHQFGFNCKSLSEQKTDESESEGALASILKVLRKIHQIFFEDHILSLAL 365
Query: 573 SQFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLR 394
VLK +R +LK CK+VFSRVFP+Q +A+ HHLWR+AE+LGA CST L
Sbjct: 366 Q-----------VLKTVRKDVLKGCKIVFSRVFPTQSQADNHHLWRMAEQLGATCSTELD 414
Query: 393 EDVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSFLWQRQSEDRF 253
VTHVVS D+GT+KS WA++++ FLV P WIEA+++ WQRQ E+ F
Sbjct: 415 PSVTHVVSKDSGTEKSHWALKHNKFLVQPGWIEAANYFWQRQPEENF 461
>ref|XP_002965594.1| hypothetical protein SELMODRAFT_167775 [Selaginella moellendorffii]
gi|300166408|gb|EFJ33014.1| hypothetical protein
SELMODRAFT_167775 [Selaginella moellendorffii]
Length = 411
Score = 371 bits (953), Expect = e-100
Identities = 192/396 (48%), Positives = 266/396 (67%), Gaps = 12/396 (3%)
Frame = -1
Query: 1368 MWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXX 1189
MWGVCI+CG KP+SE S V LKYIH+EFEL+ +AR+R+D+L+ VL +K
Sbjct: 1 MWGVCIRCGVLKPNSEPGGSASNVALKYIHEEFELAGDVLARVREDELRQVLGKRKLFLV 60
Query: 1188 XXXXXXXLNSARFIDVDPEEESYISSTYL-VGQRNVESESGDI----------GRTLYKL 1042
LNSAR+++V P+E +Y+ TY+ V + + + S G L+++
Sbjct: 61 LDLDHTLLNSARWMEVFPDETAYLEHTYMNVPEDKIPALSNGAPAVAGVIQPGGGGLHRI 120
Query: 1041 PSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIISSSD 862
M +WTKLRPF HKFLEEA++++EMY+YTMGER YA MA LLDP GKFF R+IS D
Sbjct: 121 HGMQLWTKLRPFAHKFLEEASKLFEMYVYTMGERMYAVTMAHLLDPTGKFFKGRVISQRD 180
Query: 861 STNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTKSLT 682
ST R+ KDLD+VLG +SAV+ILDDTE VWPKH++NLIV+ERYHFF +SC QF SLT
Sbjct: 181 STCRQTKDLDIVLGADSAVLILDDTEAVWPKHRANLIVMERYHFFQSSCRQFGLENPSLT 240
Query: 681 QSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRARILKD 502
+++RDE++ EG L+ +L+VL+ +H FF + S++ D RD+ V +R+ IL
Sbjct: 241 KAERDESKDEGALANVLKVLQRIHSDFF---MESDDSRYTCDVRDITSV---VRSEILSG 294
Query: 501 CKVVFSRVFPSQ-FRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAVQND 325
CK+VFSR+FP+ E LWRL +LGA C + + VTHVV+LD TDK++WA ++
Sbjct: 295 CKLVFSRIFPTDCLEPELTPLWRLCVDLGAECVLAHDDSVTHVVALDRFTDKAKWAKEHR 354
Query: 324 CFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQSSGF 217
FLVHP+W+EA+ LW+R +E FPV + +++ F
Sbjct: 355 KFLVHPAWVEAAHSLWRRPNELEFPVREGQTRAPVF 390
>ref|XP_002864543.1| hypothetical protein ARALYDRAFT_332090 [Arabidopsis lyrata subsp.
lyrata] gi|297310378|gb|EFH40802.1| hypothetical protein
ARALYDRAFT_332090 [Arabidopsis lyrata subsp. lyrata]
Length = 1006
Score = 370 bits (951), Expect = e-100
Identities = 204/457 (44%), Positives = 288/457 (63%), Gaps = 2/457 (0%)
Frame = -1
Query: 1593 IDFELDSISNASENHQDDDDQEFESSPDIDFDSEDRPRIKRRKLYDNEESEEQLPIKIED 1414
+D ELDS S+AS +++++ + ++ +KRRKL E +E E+
Sbjct: 583 LDAELDSASDASSGPSEEEEEA---------EDDEESGLKRRKLEHLETVDE------EE 627
Query: 1413 KPESSSARG-CLHPGYMWGVCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLR 1237
E+SS++G C HPG +C CGQ +++ V +YIHKE L++ EI+RLR
Sbjct: 628 IEEASSSKGECQHPGSFGNMCFVCGQKL-------EETGVSFRYIHKEMRLNEDEISRLR 680
Query: 1236 KDDLKSVLSAKKXXXXXXXXXXXLNSARFIDVDPEEESYISSTYLVGQRNVESESGDI-G 1060
D + + +K LNS D+ PEEE S T+ + + D+ G
Sbjct: 681 DSDSRFLQRQRKLYLVLDLDHTLLNSTVLRDLKPEEEYLKSHTHSLQEPFDFLLISDVSG 740
Query: 1059 RTLYKLPSMHMWTKLRPFVHKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADR 880
+L+ L MHM TKLRPFVH FL+EA++M+ MYIYTMG+RAYA +MAKLLDP+G++F DR
Sbjct: 741 GSLFMLEFMHMMTKLRPFVHSFLKEASEMFVMYIYTMGDRAYARQMAKLLDPRGEYFGDR 800
Query: 879 IISSSDSTNRRQKDLDVVLGTESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHC 700
IIS D T R QK LDVVLG ESAV+ILDDTE WP HK NLIV+ERYHFF +SC QF
Sbjct: 801 IISRDDGTVRHQKSLDVVLGQESAVLILDDTENAWPNHKDNLIVIERYHFFASSCRQFDH 860
Query: 699 GTKSLTQSKRDEAESEGTLSILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIR 520
KSL++ K DE+E +G L+ +L ++ ++ISN RDVR +LK++R
Sbjct: 861 KYKSLSELKSDESEPDGALATVL-------KNVDEDISN----------RDVRSMLKQVR 903
Query: 519 ARILKDCKVVFSRVFPSQFRAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRW 340
+LK CKVVFSRVFP++ + E H LW++AEELGA C+T + VTHVV++D GT+K+RW
Sbjct: 904 KEVLKGCKVVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVTHVVAMDVGTEKARW 963
Query: 339 AVQNDCFLVHPSWIEASSFLWQRQSEDRFPVTKKDSQ 229
AV+ ++VH WI+A+++LW++Q E++F + + Q
Sbjct: 964 AVREKKYVVHRGWIDAANYLWKKQPEEKFSLEQLKKQ 1000
>gb|EOY32065.1| RNA polymerase II ctd phosphatase, putative isoform 2 [Theobroma
cacao]
Length = 357
Score = 368 bits (944), Expect = 5e-99
Identities = 195/378 (51%), Positives = 252/378 (66%), Gaps = 1/378 (0%)
Frame = -1
Query: 1359 VCIKCGQNKPDSEENEQQSRVCLKYIHKEFELSDSEIARLRKDDLKSVLSAKKXXXXXXX 1180
+CI CGQ D +S V YIHK L + EI RLR D+K++L KK
Sbjct: 1 MCILCGQRLDD------ESGVTFGYIHKGLRLGNDEIVRLRSTDMKNLLRHKKLYLVLDL 54
Query: 1179 XXXXLNSARFIDVDPEEESYISSTYLVGQRNVESESGDIGR-TLYKLPSMHMWTKLRPFV 1003
LNS + + + P+EE YL GQ + D+ R +L+ L MHM TKLRPFV
Sbjct: 55 DHTLLNSTQLMHLTPDEE------YLKGQSD---SLQDVSRGSLFMLDFMHMMTKLRPFV 105
Query: 1002 HKFLEEANQMYEMYIYTMGERAYAEKMAKLLDPKGKFFADRIISSSDSTNRRQKDLDVVL 823
FL+EA++M+EMYIYTMG+R YA +MAKLLDP+ ++F+DR+IS D T + QK LDVVL
Sbjct: 106 RTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPRREYFSDRVISRDDGTQKHQKGLDVVL 165
Query: 822 GTESAVVILDDTEPVWPKHKSNLIVVERYHFFHASCLQFHCGTKSLTQSKRDEAESEGTL 643
G ESAVVILDDTE W KHK NLI++ERYH+F +SC QF KSL+Q K DE+E +G L
Sbjct: 166 GQESAVVILDDTENAWMKHKDNLILMERYHYFASSCHQFGYKCKSLSQLKSDESEPDGAL 225
Query: 642 SILLQVLRSVHQSFFDNISNKEMSQFCFDSRDVRLVLKEIRARILKDCKVVFSRVFPSQF 463
+ +L+ LR +H FFD + SRDVR VLK ++ +LK CK+VFS VFP+ F
Sbjct: 226 ASVLKALRQIHHMFFDELDCN------LASRDVRQVLKTVQEEVLKGCKIVFSHVFPTNF 279
Query: 462 RAETHHLWRLAEELGAICSTSLREDVTHVVSLDAGTDKSRWAVQNDCFLVHPSWIEASSF 283
AE+H LW++AE+LGA CST VTHVVS DAGT+KSRWAV+ FLVHP WIEA+++
Sbjct: 280 PAESHPLWKMAEQLGATCSTETDLSVTHVVSTDAGTEKSRWAVKEKKFLVHPRWIEATNY 339
Query: 282 LWQRQSEDRFPVTKKDSQ 229
LWQ+Q E+ FPV++ +Q
Sbjct: 340 LWQKQPEENFPVSQGKNQ 357