BLASTX nr result

ID: Ephedra27_contig00000961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00000961
         (685 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337069.1| predicted protein [Populus trichocarpa]            37   9e-06

>ref|XP_002337069.1| predicted protein [Populus trichocarpa]
          Length = 468

 Score = 37.0 bits (84), Expect(4) = 9e-06
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +2

Query: 2   LPENIGQLKKLCKLELSDCTNLKKLPDSL*ELK 100
           LP++IG+LK L +L+   C  L  LPDS+ ELK
Sbjct: 60  LPDSIGKLKSLAELDFYYCLKLASLPDSIGELK 92



 Score = 27.7 bits (60), Expect(4) = 9e-06
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 181 LNRSLRKIPESLGKLKQLKEIKLMKCA 261
           L   L  +P+S+GKLK L E+ L  C+
Sbjct: 103 LKTKLASLPDSIGKLKSLVELHLGYCS 129



 Score = 26.9 bits (58), Expect(4) = 9e-06
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 309 LFRLDLHGCRNLKKLAGSIGQLK 377
           L +LDL+ C  L  L  SIG+LK
Sbjct: 168 LVKLDLNSCSKLASLPNSIGKLK 190



 Score = 21.9 bits (45), Expect(4) = 9e-06
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 466 KIYLCDCGKLKELPKS 513
           ++YL  C KL  LP S
Sbjct: 194 ELYLSSCSKLASLPNS 209


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