BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00000920
         (1151 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16298.1| unknown [Picea sitchensis]                             439   e-120
ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   421   e-115
gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus nota...   419   e-114
gb|EMJ09551.1| hypothetical protein PRUPE_ppa001778mg [Prunus pe...   417   e-114
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   415   e-113
gb|ESW35266.1| hypothetical protein PHAVU_001G220500g [Phaseolus...   413   e-113
ref|XP_006394884.1| hypothetical protein EUTSA_v10003698mg [Eutr...   412   e-112
gb|EOY11811.1| DEAD box RNA helicase (RH3) isoform 4 [Theobroma ...   412   e-112
gb|EOY11810.1| DEAD box RNA helicase (RH3) isoform 3, partial [T...   412   e-112
gb|EOY11809.1| DEAD box RNA helicase isoform 2 [Theobroma cacao]      412   e-112
gb|EOY11808.1| DEAD box RNA helicase isoform 1 [Theobroma cacao]      412   e-112
ref|XP_003555166.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   412   e-112
ref|XP_003536002.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   412   e-112
ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [A...   409   e-112
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...   409   e-112
ref|XP_003626109.1| DEAD-box ATP-dependent RNA helicase [Medicag...   409   e-111
ref|XP_006290010.1| hypothetical protein CARUB_v10003641mg [Caps...   409   e-111
ref|XP_004165586.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   409   e-111
ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   409   e-111
ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   408   e-111

>gb|ABR16298.1| unknown [Picea sitchensis]
          Length = 802

 Score =  439 bits (1128), Expect = e-120
 Identities = 241/388 (62%), Positives = 295/388 (76%), Gaps = 11/388 (2%)
 Frame = +1

Query: 16   TSVPSSLCSAERVHIPGVAISK-TLRPALACLSKSPC---HINKFSRAIFPQRLNKLSKF 183
            +S  S L S +R H  G+ +SK + +  +  L K  C   H+ +F++   P    K S  
Sbjct: 32   SSSSSFLNSVDRGHFLGLPVSKNSTKRTIESLLKRGCTEFHVYEFTK-FSPSPGLKSSTL 90

Query: 184  RCDAAISSPNNVIREGGLDTLDFPGESDTEDFSPPGYEFETEAAQD------DEILEISK 345
            +  AA+SSPN++I E     L     S         Y++E E   D      D  L++S 
Sbjct: 91   QSSAAVSSPNSIISEEAFKGLGLSSGSSLN--LSDDYDYEDEIGNDVVVDNNDGNLDLSG 148

Query: 346  LGLDSSIVDSLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIE 525
            L L   +V++L+ RGI+ LFPIQRAV VPA+EGRD+IGRAKTGTGKTLAFGIPII+R+ +
Sbjct: 149  LNLSQELVEALANRGITHLFPIQRAVLVPALEGRDLIGRAKTGTGKTLAFGIPIIERLTK 208

Query: 526  ENTSQGR-RQSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALA 702
            +N      RQSR+LPRVLVLAPTRELAKQVEKEFKESAP+LST CIYGGVSY SQQ+ALA
Sbjct: 209  DNKENKLLRQSRRLPRVLVLAPTRELAKQVEKEFKESAPFLSTACIYGGVSYVSQQNALA 268

Query: 703  RGVDIVVGTPGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQS 882
            RGVD+VVGTPGRIIDLV  +SL L+EV+FLVLDEADQMLAVGFEE VE+IL+ LP +RQS
Sbjct: 269  RGVDVVVGTPGRIIDLVNSKSLKLNEVQFLVLDEADQMLAVGFEEDVEIILDNLPAERQS 328

Query: 883  MLFSATMPGWVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDL 1062
            MLFSATMPGWVKKL+RKHLN+P+TIDLVGE++EKLAEGIKLYAV++  S+ SKRSILGDL
Sbjct: 329  MLFSATMPGWVKKLSRKHLNNPMTIDLVGENEEKLAEGIKLYAVATTTSSNSKRSILGDL 388

Query: 1063 ITVYAKGGKSIVFTRTKRDADDVSMALS 1146
            ITV+AKGGK+IVFT+TKRDAD++S+ LS
Sbjct: 389  ITVFAKGGKTIVFTQTKRDADEISLGLS 416


>ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 772

 Score =  421 bits (1081), Expect = e-115
 Identities = 225/321 (70%), Positives = 267/321 (83%), Gaps = 4/321 (1%)
 Frame = +1

Query: 196  AISSPNNVIREGGLDTLDFPGESDTEDFSPPGYEFETEAAQ----DDEILEISKLGLDSS 363
            AI++PN+V+ E     L   G S  E  S   YE E+E A+      + L +SKLGL   
Sbjct: 70   AIATPNSVLSEEAFKGLG--GFSKEELDSESEYESESEVAEPAVGSKDELALSKLGLPQR 127

Query: 364  IVDSLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQG 543
            +VDSL +RGISSLFPIQRAV VPA+EGRDII RAKTGTGKTLAFGIPI++R+ E++  +G
Sbjct: 128  LVDSLERRGISSLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPILKRLTEDDEQRG 187

Query: 544  RRQSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIVV 723
             R+S  LPRVLVLAPTRELAKQVEKE KESAPYL+TVC+YGGVSY +QQSAL+RGVD+VV
Sbjct: 188  SRRSGYLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQSALSRGVDVVV 247

Query: 724  GTPGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSATM 903
            GTPGR+IDL+ G SL LSEV++LVLDEADQMLAVGFE+ VE IL++LP QRQSMLFSATM
Sbjct: 248  GTPGRLIDLINGGSLKLSEVQYLVLDEADQMLAVGFEDDVETILQRLPAQRQSMLFSATM 307

Query: 904  PGWVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAKG 1083
            P WVKKLARK+L++PLTIDLVG+ DEKLAEGIKLYA+S+  S  SKR+IL DLITVYAKG
Sbjct: 308  PTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYALSTTNS--SKRTILSDLITVYAKG 365

Query: 1084 GKSIVFTRTKRDADDVSMALS 1146
            GK+IVFT+TKRDAD+VSM+L+
Sbjct: 366  GKTIVFTQTKRDADEVSMSLT 386


>gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis]
          Length = 810

 Score =  419 bits (1077), Expect = e-114
 Identities = 225/324 (69%), Positives = 271/324 (83%), Gaps = 6/324 (1%)
 Frame = +1

Query: 193  AAISSPNNVIREGGLDTL-DFPGESDTEDFSPPGYEFET----EAAQDDEILEISKLGLD 357
            +AI++PN+V+ E     L DF  +S + D     YE E     EA+ DD+ L ISKLGL 
Sbjct: 60   SAIATPNSVLSEEAFKGLGDFSKDSFSGD-EEDDYESEEGEPGEASVDDDELAISKLGLP 118

Query: 358  SSIVDSLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTS 537
              +VDSL +RGI+ LFPIQRAV VPA+EGRD+I RAKTGTGKTLAFGIPII+R+ E++  
Sbjct: 119  QRLVDSLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKRLTEDDEQ 178

Query: 538  QG-RRQSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVD 714
            +G RR+S +LP+ LVLAPTRELAKQVEKE KESAP+L+TVC+YGGVSY +QQ+AL+RGVD
Sbjct: 179  RGSRRRSSRLPKGLVLAPTRELAKQVEKEIKESAPHLNTVCVYGGVSYITQQNALSRGVD 238

Query: 715  IVVGTPGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFS 894
            +VVGTPGR+IDL+ G SL L EV++LVLDEADQMLAVGFEE VEVILEKLP +RQSMLFS
Sbjct: 239  VVVGTPGRLIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQSMLFS 298

Query: 895  ATMPGWVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVY 1074
            ATMP WVKKLARK+L++PLTIDLVGE DEKLAEGIKLYA+S+  +  SKR+IL DL+TVY
Sbjct: 299  ATMPSWVKKLARKYLDNPLTIDLVGERDEKLAEGIKLYAIST--TATSKRTILSDLVTVY 356

Query: 1075 AKGGKSIVFTRTKRDADDVSMALS 1146
            AKGGK+IVFT+TKRDAD+VSMAL+
Sbjct: 357  AKGGKTIVFTQTKRDADEVSMALT 380


>gb|EMJ09551.1| hypothetical protein PRUPE_ppa001778mg [Prunus persica]
          Length = 766

 Score =  417 bits (1072), Expect = e-114
 Identities = 226/322 (70%), Positives = 267/322 (82%), Gaps = 4/322 (1%)
 Frame = +1

Query: 193  AAISSPNNVIREGGLDTLDFPGESDTEDFSPPGYEFETE---AAQDDEILEISKLGLDSS 363
            +AI++PN+V+ E     L   G S     S   Y+ ETE   AA DD+ L +SKLGL   
Sbjct: 68   SAIATPNSVLSEEAFKGLG--GFSKDSLDSDSEYDSETEPASAAGDDDELALSKLGLPQR 125

Query: 364  IVDSLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQG 543
            +VDSL +RGISSLFPIQRAV VPA+EGRDII RAKTGTGKTLAFGIPI++R+ E++  + 
Sbjct: 126  LVDSLEKRGISSLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPILKRLTEDDEQRS 185

Query: 544  -RRQSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIV 720
              R++  LPRVLVLAPTRELAKQVEKE KESAPYL+TVC+YGGVSY +QQSAL+RGVD+V
Sbjct: 186  SHRRTGYLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQSALSRGVDVV 245

Query: 721  VGTPGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSAT 900
            VGTPGRIIDL+ G SL L EV++LVLDEAD MLAVGFEE VEVIL+KLP QRQSMLFSAT
Sbjct: 246  VGTPGRIIDLINGNSLKLGEVQYLVLDEADSMLAVGFEEDVEVILQKLPTQRQSMLFSAT 305

Query: 901  MPGWVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAK 1080
            MP WVKKLARK+L++PLTIDLVG+ +EKLAEGIKLYA+S+  S  SKR+IL DLITVYAK
Sbjct: 306  MPAWVKKLARKYLDNPLTIDLVGDQEEKLAEGIKLYALSTTGS--SKRTILSDLITVYAK 363

Query: 1081 GGKSIVFTRTKRDADDVSMALS 1146
            GGK+IVFT+TKRDAD+VSM+L+
Sbjct: 364  GGKTIVFTQTKRDADEVSMSLT 385


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
            protein product [Vitis vinifera]
          Length = 764

 Score =  415 bits (1066), Expect = e-113
 Identities = 225/327 (68%), Positives = 271/327 (82%), Gaps = 9/327 (2%)
 Frame = +1

Query: 193  AAISSPNNVIRE------GGL--DTLDFPGESDTEDFSPPGYEFETEAAQDDEILEISKL 348
            +AI++PN+V+ E      GG   D LD    +DT+D   P  E E  AA  ++ L +++L
Sbjct: 67   SAIATPNSVLSEEAFKGLGGFSKDPLDV---TDTDDDYDP--EIEASAAAQEDELALAQL 121

Query: 349  GLDSSIVDSLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEE 528
            GL   +V+SL QRGI+ LFPIQRAV VPA+EGRD+I RAKTGTGKTLAFGIPII+R+ E+
Sbjct: 122  GLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKRLSED 181

Query: 529  NTSQ-GRRQSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALAR 705
            +  +  +R+S +LPRVLVLAPTRELAKQVEKE KESAPYLSTVC+YGGVSY +QQ+AL+R
Sbjct: 182  DEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYITQQNALSR 241

Query: 706  GVDIVVGTPGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSM 885
            GVD+VVGTPGRIIDL++G SL L EV+ LVLDEADQMLAVGFEE VEVILEKLP +RQSM
Sbjct: 242  GVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEADQMLAVGFEEDVEVILEKLPSERQSM 301

Query: 886  LFSATMPGWVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLI 1065
            LFSATMP WVKKLARK+L++PLTIDLVG+ DEKLAEGIKLYA+ +  +  SKR+IL DLI
Sbjct: 302  LFSATMPAWVKKLARKYLDNPLTIDLVGDHDEKLAEGIKLYAIPT--TATSKRTILSDLI 359

Query: 1066 TVYAKGGKSIVFTRTKRDADDVSMALS 1146
            TVYAKGGK+IVFT+TKRDAD+VSMAL+
Sbjct: 360  TVYAKGGKTIVFTQTKRDADEVSMALT 386


>gb|ESW35266.1| hypothetical protein PHAVU_001G220500g [Phaseolus vulgaris]
          Length = 776

 Score =  413 bits (1062), Expect = e-113
 Identities = 229/374 (61%), Positives = 271/374 (72%), Gaps = 7/374 (1%)
 Frame = +1

Query: 46   ERVHIPGVAISKTLRPALACLSKSPCHINKFSRA-------IFPQRLNKLSKFRCDAAIS 204
            E  H P    +  +R  L CL  S  H N   RA        F   L     F   A  +
Sbjct: 17   ELYHRPNATSTSAVR--LQCLD-SKSHFNNLLRAHRHSPGPTFKTGLKPTPTFLPSAVAT 73

Query: 205  SPNNVIREGGLDTLDFPGESDTEDFSPPGYEFETEAAQDDEILEISKLGLDSSIVDSLSQ 384
              ++++ E     L    +    +F         E    DE L+ISKL L S +VDSL  
Sbjct: 74   PNSSLLSEEAFKGLGRHFDQTDHEFQDASDSHTAEPLNSDE-LDISKLDLPSRLVDSLQN 132

Query: 385  RGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQGRRQSRKL 564
            RGI+ LFPIQRAV VPA++GRDII RAKTGTGKTLAFGIP+I+ + E+      R+S +L
Sbjct: 133  RGITQLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPVIKGLTEDGDETSLRRSGRL 192

Query: 565  PRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIVVGTPGRII 744
            PRVLVLAPTRELAKQVEKE KESAPYLSTVC+YGGVSY SQQSAL+RGVD+VVGTPGRII
Sbjct: 193  PRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYVSQQSALSRGVDVVVGTPGRII 252

Query: 745  DLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSATMPGWVKKL 924
            DL+ G+SL LSEV++LVLDEADQMLAVGFEE VE+ILE LP QRQSMLFSATMP WVKKL
Sbjct: 253  DLINGKSLKLSEVQYLVLDEADQMLAVGFEEDVELILENLPSQRQSMLFSATMPAWVKKL 312

Query: 925  ARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAKGGKSIVFT 1104
            ARK+LN+PLTIDLVG+ +EKLAEGIKLYA+  A +  SKR+IL DL+TVYAKGGK+IVFT
Sbjct: 313  ARKYLNNPLTIDLVGDEEEKLAEGIKLYAI--AATATSKRTILSDLVTVYAKGGKTIVFT 370

Query: 1105 RTKRDADDVSMALS 1146
            +TK+DAD+VS+AL+
Sbjct: 371  QTKKDADEVSLALT 384


>ref|XP_006394884.1| hypothetical protein EUTSA_v10003698mg [Eutrema salsugineum]
            gi|567139796|ref|XP_006394885.1| hypothetical protein
            EUTSA_v10003698mg [Eutrema salsugineum]
            gi|557091523|gb|ESQ32170.1| hypothetical protein
            EUTSA_v10003698mg [Eutrema salsugineum]
            gi|557091524|gb|ESQ32171.1| hypothetical protein
            EUTSA_v10003698mg [Eutrema salsugineum]
          Length = 751

 Score =  412 bits (1060), Expect = e-112
 Identities = 225/345 (65%), Positives = 273/345 (79%), Gaps = 1/345 (0%)
 Frame = +1

Query: 115  SPCHINKFSRAIFPQRLNKLSKFRCDAAISSPNNVIREGGLDTLDFPGESDTEDFSPPGY 294
            SP  + + +R I     +  S     +A+++PN+V+ E    +L   G SD ++F   G 
Sbjct: 40   SPISLRR-TRLIHSSSSSTSSSLLIPSAVATPNSVLSEEAFKSL---GLSDHDEFDLDG- 94

Query: 295  EFETEAAQDDEILEISKLGLDSSIVDSLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTG 474
                +++ D E L ISKLGL   + +SL +RGI+ LFPIQRAV VPA++GRDII RAKTG
Sbjct: 95   ---NDSSDDAEELAISKLGLPQRLGESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTG 151

Query: 475  TGKTLAFGIPIIQRIIEENTSQGR-RQSRKLPRVLVLAPTRELAKQVEKEFKESAPYLST 651
            TGKTLAFGIPII+R+ E++      R+  +LP+ LVLAPTRELAKQVEKE KESAPYLST
Sbjct: 152  TGKTLAFGIPIIKRLTEQSGDYSAFRRPGRLPKFLVLAPTRELAKQVEKEIKESAPYLST 211

Query: 652  VCIYGGVSYTSQQSALARGVDIVVGTPGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGF 831
            VC+YGGVSYT QQSAL RGVD+VVGTPGRIIDL+EGRSL L EV++LVLDEADQMLAVGF
Sbjct: 212  VCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGF 271

Query: 832  EEPVEVILEKLPEQRQSMLFSATMPGWVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYA 1011
            EE VE ILE LP++RQSMLFSATMP WVKKLARK+L++PL IDLVG+ DEKLAEGIKLYA
Sbjct: 272  EEAVESILENLPQKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYA 331

Query: 1012 VSSAQSTASKRSILGDLITVYAKGGKSIVFTRTKRDADDVSMALS 1146
            +S+  S+ SKR+IL DLITVYAKGGK+IVFT+TKRDAD+VS+ALS
Sbjct: 332  ISA--SSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALS 374


>gb|EOY11811.1| DEAD box RNA helicase (RH3) isoform 4 [Theobroma cacao]
          Length = 622

 Score =  412 bits (1059), Expect = e-112
 Identities = 219/319 (68%), Positives = 261/319 (81%), Gaps = 2/319 (0%)
 Frame = +1

Query: 196  AISSPNNVIREGGLDTLDFPGESDTEDFSPPGYEFETEAAQDDEILEISKLGLDSSIVDS 375
            A+++PN+V+ E     L    + D +D     YE    +  DDE L+ISKLGL   +VDS
Sbjct: 68   AVATPNSVLSEQAFKGLSLHQDQDGQDV----YEAAASSNHDDE-LDISKLGLPQRLVDS 122

Query: 376  LSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQG--RR 549
            L QRGI+ LFPIQRAVFVPA++GRDII RAKTGTGKTLAFGIPII+R+  +   Q   RR
Sbjct: 123  LLQRGITHLFPIQRAVFVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTHDAPQQTSPRR 182

Query: 550  QSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIVVGT 729
             S +LPRVLVLAPTRELAKQVEKE KESAPYL+TVC+YGGVSY +Q++AL+RGVD+VVGT
Sbjct: 183  MSGRLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYNTQRNALSRGVDVVVGT 242

Query: 730  PGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSATMPG 909
            PGRIIDL+E   L L EV++LVLDEADQMLAVGFEE VE ILE LP +RQSMLFSATMP 
Sbjct: 243  PGRIIDLIESSDLKLGEVEYLVLDEADQMLAVGFEEDVEEILENLPSKRQSMLFSATMPS 302

Query: 910  WVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAKGGK 1089
            WVKKLARK+L++PL IDLVG+ DEKLAEGIKLYA+S+  ++ +KR+IL DLITVYAKGGK
Sbjct: 303  WVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIST--TSTAKRTILSDLITVYAKGGK 360

Query: 1090 SIVFTRTKRDADDVSMALS 1146
            +IVFT+TKRDADDVS+AL+
Sbjct: 361  TIVFTQTKRDADDVSIALT 379


>gb|EOY11810.1| DEAD box RNA helicase (RH3) isoform 3, partial [Theobroma cacao]
          Length = 689

 Score =  412 bits (1059), Expect = e-112
 Identities = 219/319 (68%), Positives = 261/319 (81%), Gaps = 2/319 (0%)
 Frame = +1

Query: 196  AISSPNNVIREGGLDTLDFPGESDTEDFSPPGYEFETEAAQDDEILEISKLGLDSSIVDS 375
            A+++PN+V+ E     L    + D +D     YE    +  DDE L+ISKLGL   +VDS
Sbjct: 68   AVATPNSVLSEQAFKGLSLHQDQDGQDV----YEAAASSNHDDE-LDISKLGLPQRLVDS 122

Query: 376  LSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQG--RR 549
            L QRGI+ LFPIQRAVFVPA++GRDII RAKTGTGKTLAFGIPII+R+  +   Q   RR
Sbjct: 123  LLQRGITHLFPIQRAVFVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTHDAPQQTSPRR 182

Query: 550  QSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIVVGT 729
             S +LPRVLVLAPTRELAKQVEKE KESAPYL+TVC+YGGVSY +Q++AL+RGVD+VVGT
Sbjct: 183  MSGRLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYNTQRNALSRGVDVVVGT 242

Query: 730  PGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSATMPG 909
            PGRIIDL+E   L L EV++LVLDEADQMLAVGFEE VE ILE LP +RQSMLFSATMP 
Sbjct: 243  PGRIIDLIESSDLKLGEVEYLVLDEADQMLAVGFEEDVEEILENLPSKRQSMLFSATMPS 302

Query: 910  WVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAKGGK 1089
            WVKKLARK+L++PL IDLVG+ DEKLAEGIKLYA+S+  ++ +KR+IL DLITVYAKGGK
Sbjct: 303  WVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIST--TSTAKRTILSDLITVYAKGGK 360

Query: 1090 SIVFTRTKRDADDVSMALS 1146
            +IVFT+TKRDADDVS+AL+
Sbjct: 361  TIVFTQTKRDADDVSIALT 379


>gb|EOY11809.1| DEAD box RNA helicase isoform 2 [Theobroma cacao]
          Length = 732

 Score =  412 bits (1059), Expect = e-112
 Identities = 219/319 (68%), Positives = 261/319 (81%), Gaps = 2/319 (0%)
 Frame = +1

Query: 196  AISSPNNVIREGGLDTLDFPGESDTEDFSPPGYEFETEAAQDDEILEISKLGLDSSIVDS 375
            A+++PN+V+ E     L    + D +D     YE    +  DDE L+ISKLGL   +VDS
Sbjct: 68   AVATPNSVLSEQAFKGLSLHQDQDGQDV----YEAAASSNHDDE-LDISKLGLPQRLVDS 122

Query: 376  LSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQG--RR 549
            L QRGI+ LFPIQRAVFVPA++GRDII RAKTGTGKTLAFGIPII+R+  +   Q   RR
Sbjct: 123  LLQRGITHLFPIQRAVFVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTHDAPQQTSPRR 182

Query: 550  QSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIVVGT 729
             S +LPRVLVLAPTRELAKQVEKE KESAPYL+TVC+YGGVSY +Q++AL+RGVD+VVGT
Sbjct: 183  MSGRLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYNTQRNALSRGVDVVVGT 242

Query: 730  PGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSATMPG 909
            PGRIIDL+E   L L EV++LVLDEADQMLAVGFEE VE ILE LP +RQSMLFSATMP 
Sbjct: 243  PGRIIDLIESSDLKLGEVEYLVLDEADQMLAVGFEEDVEEILENLPSKRQSMLFSATMPS 302

Query: 910  WVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAKGGK 1089
            WVKKLARK+L++PL IDLVG+ DEKLAEGIKLYA+S+  ++ +KR+IL DLITVYAKGGK
Sbjct: 303  WVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIST--TSTAKRTILSDLITVYAKGGK 360

Query: 1090 SIVFTRTKRDADDVSMALS 1146
            +IVFT+TKRDADDVS+AL+
Sbjct: 361  TIVFTQTKRDADDVSIALT 379


>gb|EOY11808.1| DEAD box RNA helicase isoform 1 [Theobroma cacao]
          Length = 742

 Score =  412 bits (1059), Expect = e-112
 Identities = 219/319 (68%), Positives = 261/319 (81%), Gaps = 2/319 (0%)
 Frame = +1

Query: 196  AISSPNNVIREGGLDTLDFPGESDTEDFSPPGYEFETEAAQDDEILEISKLGLDSSIVDS 375
            A+++PN+V+ E     L    + D +D     YE    +  DDE L+ISKLGL   +VDS
Sbjct: 68   AVATPNSVLSEQAFKGLSLHQDQDGQDV----YEAAASSNHDDE-LDISKLGLPQRLVDS 122

Query: 376  LSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQG--RR 549
            L QRGI+ LFPIQRAVFVPA++GRDII RAKTGTGKTLAFGIPII+R+  +   Q   RR
Sbjct: 123  LLQRGITHLFPIQRAVFVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTHDAPQQTSPRR 182

Query: 550  QSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIVVGT 729
             S +LPRVLVLAPTRELAKQVEKE KESAPYL+TVC+YGGVSY +Q++AL+RGVD+VVGT
Sbjct: 183  MSGRLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYNTQRNALSRGVDVVVGT 242

Query: 730  PGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSATMPG 909
            PGRIIDL+E   L L EV++LVLDEADQMLAVGFEE VE ILE LP +RQSMLFSATMP 
Sbjct: 243  PGRIIDLIESSDLKLGEVEYLVLDEADQMLAVGFEEDVEEILENLPSKRQSMLFSATMPS 302

Query: 910  WVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAKGGK 1089
            WVKKLARK+L++PL IDLVG+ DEKLAEGIKLYA+S+  ++ +KR+IL DLITVYAKGGK
Sbjct: 303  WVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIST--TSTAKRTILSDLITVYAKGGK 360

Query: 1090 SIVFTRTKRDADDVSMALS 1146
            +IVFT+TKRDADDVS+AL+
Sbjct: 361  TIVFTQTKRDADDVSIALT 379


>ref|XP_003555166.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Glycine max]
          Length = 736

 Score =  412 bits (1059), Expect = e-112
 Identities = 214/319 (67%), Positives = 264/319 (82%), Gaps = 1/319 (0%)
 Frame = +1

Query: 193  AAISSP-NNVIREGGLDTLDFPGESDTEDFSPPGYEFETEAAQDDEILEISKLGLDSSIV 369
            +AI++P ++++ E     L     S++  F   GY++E +    D  L+ISKLGL S +V
Sbjct: 50   SAIATPTSSILTEQPFKGLTLDDASNSNQF---GYDYEPDTNVSDHELDISKLGLPSPLV 106

Query: 370  DSLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQGRR 549
             SL QRGI+SLFPIQRAV VPA+EG+DII RAKTGTGKTLAFGIPI++ + +++     R
Sbjct: 107  HSLQQRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPILKGLTDDDEQSSHR 166

Query: 550  QSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIVVGT 729
            +S +LP+ LVLAPTRELAKQVEKE +ESAPYL TVC+YGGVSY +QQ AL+ GVD+VVGT
Sbjct: 167  RSGRLPKALVLAPTRELAKQVEKEIQESAPYLKTVCVYGGVSYVTQQGALSHGVDVVVGT 226

Query: 730  PGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSATMPG 909
            PGRIIDLV G SL LSEV++LVLDEAD+MLAVGFEE VEVIL+K+P QRQ+MLFSATMPG
Sbjct: 227  PGRIIDLVNGNSLKLSEVQYLVLDEADRMLAVGFEEDVEVILDKVPAQRQTMLFSATMPG 286

Query: 910  WVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAKGGK 1089
            WVKKL+RK+LN+PLTIDLVGE +EKLAEGIKLYA+S+  S  SKR++L DLITVYAKGGK
Sbjct: 287  WVKKLSRKYLNNPLTIDLVGEQEEKLAEGIKLYALSATAS--SKRTVLSDLITVYAKGGK 344

Query: 1090 SIVFTRTKRDADDVSMALS 1146
            +IVFT+TK+DAD+VSMAL+
Sbjct: 345  TIVFTQTKKDADEVSMALT 363


>ref|XP_003536002.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Glycine max]
          Length = 736

 Score =  412 bits (1059), Expect = e-112
 Identities = 216/318 (67%), Positives = 264/318 (83%)
 Frame = +1

Query: 193  AAISSPNNVIREGGLDTLDFPGESDTEDFSPPGYEFETEAAQDDEILEISKLGLDSSIVD 372
            +AI++P+ ++ E  L  L     S+++ F   GY+FE +    D  L+ISKLGL S +V 
Sbjct: 50   SAIATPS-ILTEQPLKGLTLDDLSNSDQF---GYDFEPDTNVSDHELDISKLGLPSPLVH 105

Query: 373  SLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQGRRQ 552
            SL +RGI SLFPIQRAV VPA+EG+DII RAKTGTGKTLAFGIPI++ +  ++     R+
Sbjct: 106  SLQKRGIISLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPILKGLTNDDEQSPHRR 165

Query: 553  SRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIVVGTP 732
            S +LP+ LVLAPTRELAKQVEKE +ESAPYL TVC+YGGVSY +QQSAL+RGVD+VVGTP
Sbjct: 166  SGRLPKALVLAPTRELAKQVEKEIQESAPYLKTVCVYGGVSYVTQQSALSRGVDVVVGTP 225

Query: 733  GRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSATMPGW 912
            GRIIDLV G SL LSEV++LVLDEADQMLAVGFEE VEVIL+K+P QRQ+MLFSATMPGW
Sbjct: 226  GRIIDLVNGNSLKLSEVQYLVLDEADQMLAVGFEEDVEVILDKVPTQRQTMLFSATMPGW 285

Query: 913  VKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAKGGKS 1092
            VKKL+RK+LN+PLTIDLVGE +EKLAEGIKLYA+ +  +  SKR++L DLITVYAKGGK+
Sbjct: 286  VKKLSRKYLNNPLTIDLVGEQEEKLAEGIKLYALLA--TATSKRTVLSDLITVYAKGGKT 343

Query: 1093 IVFTRTKRDADDVSMALS 1146
            IVFT+TK+DAD+VSMAL+
Sbjct: 344  IVFTQTKKDADEVSMALT 361


>ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [Amborella trichopoda]
            gi|548843569|gb|ERN03223.1| hypothetical protein
            AMTR_s00003p00168720 [Amborella trichopoda]
          Length = 768

 Score =  409 bits (1052), Expect = e-112
 Identities = 237/383 (61%), Positives = 285/383 (74%), Gaps = 4/383 (1%)
 Frame = +1

Query: 10   SMTSVPSSLCSAERVHIPGVAISKTLRPALACLSKSPCHINKFSRAIFPQRLNKLSKFRC 189
            S++S PS   S+E+     ++  K L  +     ++ C +N  S A   +R        C
Sbjct: 28   SLSSAPS-YSSSEKPQFRSLSSPKPLNKSF----EASCSLNGDSSA---KRHGFKGLIPC 79

Query: 190  DAAISSPNNVIREGGLDTLDFPGESDTEDFSPPG---YEFETEA-AQDDEILEISKLGLD 357
              AI++PN+V+ E     L   G S    F   G   YE E  + A ++E L I  LGL 
Sbjct: 80   --AIATPNSVLSEEAFKGLG--GLSKGRGFKDDGEDDYELEVGSEASNEENLAIGNLGLR 135

Query: 358  SSIVDSLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTS 537
              +VD+L++RGI+ LFPIQRAV VPA+EGRDIIGRAKTGTGKTLAF IPII+R+ +E  S
Sbjct: 136  EELVDALAKRGITHLFPIQRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKRLDDEGRS 195

Query: 538  QGRRQSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDI 717
              R    +LPRVLVLAPTRELAKQVEKE KESAPYLSTVC+YGGVSY  QQ+AL RGVD+
Sbjct: 196  PSRG---RLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNIQQNALTRGVDV 252

Query: 718  VVGTPGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSA 897
            VVGTPGRIIDLV G SL L EV++LVLDEADQMLAVGFEE VEVILEKLP  RQSMLFSA
Sbjct: 253  VVGTPGRIIDLVNGNSLQLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPTGRQSMLFSA 312

Query: 898  TMPGWVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYA 1077
            TMPGWVKKLARK+L++P+TIDLVG+ +EKLAEGIKLYA+ +  +T  KR+ILGDLITVYA
Sbjct: 313  TMPGWVKKLARKYLDNPMTIDLVGDQEEKLAEGIKLYAIPTTATT--KRTILGDLITVYA 370

Query: 1078 KGGKSIVFTRTKRDADDVSMALS 1146
            KGGK+IVFT+TKRDAD+VS+AL+
Sbjct: 371  KGGKTIVFTQTKRDADEVSLALT 393


>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 772

 Score =  409 bits (1052), Expect = e-112
 Identities = 218/325 (67%), Positives = 263/325 (80%), Gaps = 7/325 (2%)
 Frame = +1

Query: 193  AAISSPNNVIREGGLDTL-----DFPGESDTEDFSPPGYEFET--EAAQDDEILEISKLG 351
            +AI++PN+++ E     L     DF  + D +D S  GYE +   E+  DD+ L ISKLG
Sbjct: 67   SAIAAPNSILSEEAFKGLGGRLSDFDEDEDNDDVSSGGYEDDGAGESLPDDDELAISKLG 126

Query: 352  LDSSIVDSLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEEN 531
            L   +V+SL +RGI+ LFPIQRAV VPA+EGRD+I RAKTGTGKTLAFGIPII+ I E++
Sbjct: 127  LPQRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKCITEDD 186

Query: 532  TSQGRRQSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGV 711
             S  RR  R LPRVLVLAPTRELAKQVEKE  ESAPYLSTVC+YGGVSY +Q++AL+RGV
Sbjct: 187  KSSQRRTGR-LPRVLVLAPTRELAKQVEKEINESAPYLSTVCVYGGVSYITQRNALSRGV 245

Query: 712  DIVVGTPGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLF 891
            D+VVGTPGRIIDL+   SL L EV++LVLDEADQML+ GFEE VEVILE LP +RQSMLF
Sbjct: 246  DVVVGTPGRIIDLINSGSLKLGEVEYLVLDEADQMLSFGFEEDVEVILENLPSKRQSMLF 305

Query: 892  SATMPGWVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITV 1071
            SATMP WVKKLARK+L++PL IDLVG+ +EKLAEGIKLYA+S+  +  SKRSIL DL+TV
Sbjct: 306  SATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKLYAIST--NATSKRSILSDLVTV 363

Query: 1072 YAKGGKSIVFTRTKRDADDVSMALS 1146
            YAKGGK+I+FT+TKRDAD+VSM L+
Sbjct: 364  YAKGGKTIIFTQTKRDADEVSMVLT 388


>ref|XP_003626109.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|87240993|gb|ABD32851.1| Helicase, C-terminal; Zinc
            finger, CCHC-type; GUCT [Medicago truncatula]
            gi|355501124|gb|AES82327.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 753

 Score =  409 bits (1051), Expect = e-111
 Identities = 226/348 (64%), Positives = 271/348 (77%), Gaps = 11/348 (3%)
 Frame = +1

Query: 136  FSRAIFPQRLNKLSKFRCD-----AAISSPNN----VIREGGLDTL--DFPGESDTEDFS 282
            FS     + +N+L+ F        +A+++PN+    ++ +     L   F GES+ EDF 
Sbjct: 38   FSDGNKSRHINRLANFNSSDRFLPSAVATPNSSSSSLLSDEAFKGLGSSFDGESEDEDFP 97

Query: 283  PPGYEFETEAAQDDEILEISKLGLDSSIVDSLSQRGISSLFPIQRAVFVPAMEGRDIIGR 462
                   T +   DE L+ISKL L S +VDSL  RGI+ LFPIQRAV VPA+EGRDII R
Sbjct: 98   S-----RTTSINADE-LDISKLDLPSQLVDSLRDRGITQLFPIQRAVLVPALEGRDIIAR 151

Query: 463  AKTGTGKTLAFGIPIIQRIIEENTSQGRRQSRKLPRVLVLAPTRELAKQVEKEFKESAPY 642
            AKTGTGKTLAFGIPII  + ++    G    R+LPR LVLAPTRELAKQVEKE KESAPY
Sbjct: 152  AKTGTGKTLAFGIPIINGL-DDGQDSGPYSRRRLPRALVLAPTRELAKQVEKEIKESAPY 210

Query: 643  LSTVCIYGGVSYTSQQSALARGVDIVVGTPGRIIDLVEGRSLVLSEVKFLVLDEADQMLA 822
            L TVCIYGGVSY +QQSAL+RGVD+VVGTPGR+IDL+ G +L LSEV++LVLDEADQMLA
Sbjct: 211  LKTVCIYGGVSYVTQQSALSRGVDVVVGTPGRLIDLINGNTLKLSEVEYLVLDEADQMLA 270

Query: 823  VGFEEPVEVILEKLPEQRQSMLFSATMPGWVKKLARKHLNDPLTIDLVGESDEKLAEGIK 1002
            VGFEE VEVILEKLP +RQSMLFSATMP WVKKLARK+LN+PLTIDLVG+ +EKLAEGIK
Sbjct: 271  VGFEEDVEVILEKLPAKRQSMLFSATMPSWVKKLARKYLNNPLTIDLVGDEEEKLAEGIK 330

Query: 1003 LYAVSSAQSTASKRSILGDLITVYAKGGKSIVFTRTKRDADDVSMALS 1146
            LYA+S+  ++ SKR+IL DLITVYAKGGK+IVFT+TKRDAD+VS+AL+
Sbjct: 331  LYAISA--TSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALT 376


>ref|XP_006290010.1| hypothetical protein CARUB_v10003641mg [Capsella rubella]
            gi|482558716|gb|EOA22908.1| hypothetical protein
            CARUB_v10003641mg [Capsella rubella]
          Length = 746

 Score =  409 bits (1050), Expect = e-111
 Identities = 224/330 (67%), Positives = 262/330 (79%), Gaps = 1/330 (0%)
 Frame = +1

Query: 160  RLNKLSKFRCDAAISSPNNVIREGGLDTLDFPGESDTEDFSPPGYEFETEAAQDDEILEI 339
            RL   S     +A+++PN+V+ E    +L   G SD ++F   G       A D E L I
Sbjct: 49   RLIHSSSLLVPSAVATPNSVLSEEAFKSL---GLSDHDEFDSDGDN--NVEADDGEELAI 103

Query: 340  SKLGLDSSIVDSLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRI 519
            SKL L   + +SL +RGI+ LFPIQRAV VPA+EGRDII RAKTGTGKTLAFGIPII+R+
Sbjct: 104  SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKRL 163

Query: 520  IEE-NTSQGRRQSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSA 696
             E+       R+S +LP+ LVLAPTRELAKQVEKE KESAPYLSTVC+YGGVSYT QQSA
Sbjct: 164  TEQAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSA 223

Query: 697  LARGVDIVVGTPGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQR 876
            L RGVD+VVGTPGRIIDL+EGRSL L EV++LVLDEADQMLAVGFEE VE ILE LP +R
Sbjct: 224  LTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKR 283

Query: 877  QSMLFSATMPGWVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILG 1056
            QSMLFSATMP WVKKLARK+L++PL IDLVG+ DEKLAEGIKLYA+  A ++ SKR+IL 
Sbjct: 284  QSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAI--ATTSTSKRTILS 341

Query: 1057 DLITVYAKGGKSIVFTRTKRDADDVSMALS 1146
            DLITVYAKGGK+IVFT+TKRDAD+VS+ALS
Sbjct: 342  DLITVYAKGGKTIVFTQTKRDADEVSLALS 371


>ref|XP_004165586.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like,
            partial [Cucumis sativus]
          Length = 726

 Score =  409 bits (1050), Expect = e-111
 Identities = 218/362 (60%), Positives = 276/362 (76%), Gaps = 1/362 (0%)
 Frame = +1

Query: 64   GVAISKTLRPALACLSKSPCHINKFSRAIFPQRLNKLSKFRCDAAISSPNNVIREGGLDT 243
            G   + +  P+L+ + KS     K            LS F   +AI++PN+++ E    +
Sbjct: 23   GTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLSGFT-SSAIATPNSILSEEAFRS 81

Query: 244  LD-FPGESDTEDFSPPGYEFETEAAQDDEILEISKLGLDSSIVDSLSQRGISSLFPIQRA 420
             D F  +S  ++   P        A DD+ L ISKL L   + D+L +RGI+ LFPIQRA
Sbjct: 82   FDGFSEDSLDDNLIDPEPNSSLAFAADDDELAISKLNLPQRLTDALQKRGITHLFPIQRA 141

Query: 421  VFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQGRRQSRKLPRVLVLAPTREL 600
            V VPA+EGRD+I RAKTGTGKTLAFGIPI++++ E++ S+  R+  +LPRVLVL PTREL
Sbjct: 142  VLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSLRRRSRLPRVLVLTPTREL 201

Query: 601  AKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIVVGTPGRIIDLVEGRSLVLSE 780
            AKQVEKE KESAPYL+TVC+YGGVSY +QQ+AL+RGVD+VVGTPGR+IDL+ G SL L E
Sbjct: 202  AKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSRGVDVVVGTPGRLIDLINGNSLNLGE 261

Query: 781  VKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSATMPGWVKKLARKHLNDPLTID 960
            V++LVLDEADQMLAVGFEE VEVILEKLP QRQ+MLFSATMP WVKKLARK+L++PLTID
Sbjct: 262  VEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLDNPLTID 321

Query: 961  LVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAKGGKSIVFTRTKRDADDVSMA 1140
            LVG+ DEKLAEGIKL+A+ +  +  SK++IL DL+TVYAKGGK+IVFT+TKRDAD+VS+A
Sbjct: 322  LVGDQDEKLAEGIKLHAILT--TATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLA 379

Query: 1141 LS 1146
            L+
Sbjct: 380  LA 381


>ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Cucumis sativus]
          Length = 748

 Score =  409 bits (1050), Expect = e-111
 Identities = 218/362 (60%), Positives = 276/362 (76%), Gaps = 1/362 (0%)
 Frame = +1

Query: 64   GVAISKTLRPALACLSKSPCHINKFSRAIFPQRLNKLSKFRCDAAISSPNNVIREGGLDT 243
            G   + +  P+L+ + KS     K            LS F   +AI++PN+++ E    +
Sbjct: 23   GTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLSGFT-SSAIATPNSILSEEAFRS 81

Query: 244  LD-FPGESDTEDFSPPGYEFETEAAQDDEILEISKLGLDSSIVDSLSQRGISSLFPIQRA 420
             D F  +S  ++   P        A DD+ L ISKL L   + D+L +RGI+ LFPIQRA
Sbjct: 82   FDGFSEDSLDDNLIDPEPNSSLAFAADDDELAISKLNLPQRLTDALQKRGITHLFPIQRA 141

Query: 421  VFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQGRRQSRKLPRVLVLAPTREL 600
            V VPA+EGRD+I RAKTGTGKTLAFGIPI++++ E++ S+  R+  +LPRVLVL PTREL
Sbjct: 142  VLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSLRRRSRLPRVLVLTPTREL 201

Query: 601  AKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIVVGTPGRIIDLVEGRSLVLSE 780
            AKQVEKE KESAPYL+TVC+YGGVSY +QQ+AL+RGVD+VVGTPGR+IDL+ G SL L E
Sbjct: 202  AKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSRGVDVVVGTPGRLIDLINGNSLNLGE 261

Query: 781  VKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSATMPGWVKKLARKHLNDPLTID 960
            V++LVLDEADQMLAVGFEE VEVILEKLP QRQ+MLFSATMP WVKKLARK+L++PLTID
Sbjct: 262  VEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLDNPLTID 321

Query: 961  LVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAKGGKSIVFTRTKRDADDVSMA 1140
            LVG+ DEKLAEGIKL+A+ +  +  SK++IL DL+TVYAKGGK+IVFT+TKRDAD+VS+A
Sbjct: 322  LVGDQDEKLAEGIKLHAILT--TATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLA 379

Query: 1141 LS 1146
            L+
Sbjct: 380  LA 381


>ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Solanum lycopersicum]
          Length = 746

 Score =  408 bits (1049), Expect = e-111
 Identities = 225/382 (58%), Positives = 282/382 (73%), Gaps = 9/382 (2%)
 Frame = +1

Query: 28   SSLCSAERVHIPGVAISKTLRPALACLSKSPCHINKFSRAIFPQRLNKLSKFRCDAAISS 207
            SS+     ++    ++  + RP        P  I K +   F   +     F   A ++ 
Sbjct: 5    SSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSIEKSN---FHVHVRLRRPFLASAVVTP 61

Query: 208  PNNVIREG--------GLDTLDFP-GESDTEDFSPPGYEFETEAAQDDEILEISKLGLDS 360
             ++V+ E         G D+L+    E D+ED      E E   + +DE L +SKLGL  
Sbjct: 62   TSSVLSEEAFKGIGGFGKDSLNVSESEYDSED------EVEDNESNEDE-LSVSKLGLPH 114

Query: 361  SIVDSLSQRGISSLFPIQRAVFVPAMEGRDIIGRAKTGTGKTLAFGIPIIQRIIEENTSQ 540
             +VD+L +RGI+ LFPIQRAV VPA+EGRDII RAKTGTGKTLAFGIP+++++  +   +
Sbjct: 115  RLVDALEKRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPVLKKLSTDEEMR 174

Query: 541  GRRQSRKLPRVLVLAPTRELAKQVEKEFKESAPYLSTVCIYGGVSYTSQQSALARGVDIV 720
              ++  +LP+VLVLAPTRELA QVEKE KESAPYL+TVCIYGGVSY +QQ+AL+RGVD+V
Sbjct: 175  NTQRRGRLPKVLVLAPTRELANQVEKEMKESAPYLNTVCIYGGVSYATQQNALSRGVDVV 234

Query: 721  VGTPGRIIDLVEGRSLVLSEVKFLVLDEADQMLAVGFEEPVEVILEKLPEQRQSMLFSAT 900
            VGTPGR+IDL+   +L L EV++LVLDEADQMLAVGFEE VEVILEKLP QRQSMLFSAT
Sbjct: 235  VGTPGRLIDLINNNTLKLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPPQRQSMLFSAT 294

Query: 901  MPGWVKKLARKHLNDPLTIDLVGESDEKLAEGIKLYAVSSAQSTASKRSILGDLITVYAK 1080
            MPGWVKKL+RK+LN+PLTIDLVG+ DEKLAEGIKLYA+S+  ++ SKRSILGDL+TVYAK
Sbjct: 295  MPGWVKKLSRKYLNNPLTIDLVGDQDEKLAEGIKLYALSA--TSTSKRSILGDLVTVYAK 352

Query: 1081 GGKSIVFTRTKRDADDVSMALS 1146
            GGK+IVFT+TKRDAD+VSMALS
Sbjct: 353  GGKTIVFTQTKRDADEVSMALS 374