BLASTX nr result
ID: Ephedra27_contig00000817
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00000817
(4193 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006836567.1| hypothetical protein AMTR_s00131p00068700 [A... 749 0.0
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 733 0.0
ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V sub... 728 0.0
ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E sub... 726 0.0
ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E sub... 726 0.0
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 721 0.0
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 718 0.0
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 717 0.0
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 717 0.0
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 715 0.0
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 708 0.0
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 707 0.0
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe... 705 0.0
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 702 0.0
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative... 701 0.0
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative... 701 0.0
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 701 0.0
gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo... 700 0.0
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 697 0.0
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 696 0.0
>ref|XP_006836567.1| hypothetical protein AMTR_s00131p00068700 [Amborella trichopoda]
gi|548839106|gb|ERM99420.1| hypothetical protein
AMTR_s00131p00068700 [Amborella trichopoda]
Length = 1916
Score = 749 bits (1934), Expect = 0.0
Identities = 488/1410 (34%), Positives = 733/1410 (51%), Gaps = 40/1410 (2%)
Frame = +1
Query: 82 YPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASK 261
YPP ++ K + A LELK+ S+ + +W FL ++ R LL YEA +
Sbjct: 135 YPPISVKEIKKTDGAYSLELKLPSRREIPPGFWKFLDKYGYHYGDSSLC-RPLLAYEARQ 193
Query: 262 ILKKIPEKIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPD-ALGSTVKISDYGVQMLKK 438
ILK +PE+ ++ + +S GLI+D + VPPNC+ IPD G + S + LKK
Sbjct: 194 ILKNLPERTVRWLAEKGSFPQS-GLIIDRVAVPPNCLCIPDFPQGKSSFSSSPAIASLKK 252
Query: 439 IVSSVQD-KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEF 615
++ +S G F H+ +LQS ++Y + K S F
Sbjct: 253 LLVKADIITKSRSGIANFESHEIEANDLQSTCSRYFLSRSSAKESGNFLRKVGVP--KVV 310
Query: 616 SKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFN 795
++S A WL+KMR+ FISK G SSR V+TGD Y GI +IG+PLEIA+++T EE VT N
Sbjct: 311 NESSARLWLEKMRTFFISKGSGFSSRSVITGDAYMGINQIGLPLEIARKITFEEKVTSMN 370
Query: 796 KEKIRKMVEGGKCHTLSRKDGAKFFGEAMKLSGNIEVGDLINRSLQEGDIVFINRPPSIH 975
K++++ +++ G C T ++ K S ++++G++INR + +GDIVFINRPPS H
Sbjct: 371 KDRLQSLLDRGLCLTFKDGQTTYVLRDSSKGSKSLKIGNVINRRIVDGDIVFINRPPSTH 430
Query: 976 KHSIQAMRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQI 1155
KHSIQA V++H T+ INPLIC P G DFDGDC+H F+P+SL ++AE ++L SV++Q+
Sbjct: 431 KHSIQAFSVYVHEDSTIKINPLICEPFGADFDGDCIHIFYPQSLAARAEAIELFSVEQQL 490
Query: 1156 FSSHSGEANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLW 1335
SSHSG N+ D+LL+AKL+ ++ FV++AT+ QL+MW L S +PAI+ +G LW
Sbjct: 491 LSSHSGSLNVKFMHDSLLSAKLVFKTYFVNRATVQQLSMWTLPSFIEPAIVKARDG-PLW 549
Query: 1336 TAVQVIQTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALE 1515
T +Q++Q+ LP + + G + LI I M + ++ L+EI S+V G + AL+
Sbjct: 550 TVLQLLQSGLPSSFDCSGPRYLISHSEILEMQPTRDQLPPLLTEILNSIVLMKGPKEALK 609
Query: 1516 CLHSLECILVEWLSSSGFSVSIEDFVLPASAT--LKNDLSEISKLIRYMGVGSYQTNILS 1689
+SL+ + +E L G+S+ + DF +P +K+ + IS L+++M + I S
Sbjct: 610 VFNSLQPLFMEILFMEGYSIGLGDFNVPKPIMDHIKSKIKSISPLLKHMRSTDNEL-IES 668
Query: 1690 QVERGVKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQFFHGKNAIPSDW 1869
QV + + D + I++ I S+S +ID +SS++ +++V+Q+GFLG+Q F D
Sbjct: 669 QVAKSLDDAKLPIVKFILKSSSLGGLIDSSSSQAVNKVVEQIGFLGLQLFSRGKYYTKDL 728
Query: 1870 QKRLHTHLPCGESSFLQEYEVESPEVHGFITSSFISGLNPCEAFIHSVHSREGLLSQKMG 2049
L + + + +Y ES G I S GLNP E ++SV REG + G
Sbjct: 729 VDDLISFIQSKHVAKGFDYPTES---FGLIKSCLFHGLNPYEELVYSVSVREGSVRSSKG 785
Query: 2050 LKEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGHFVEKS 2229
L EPG+LFK+LMA LRDV +CYDGTVRN C N LVQF+YG G +
Sbjct: 786 LSEPGILFKHLMAVLRDVVICYDGTVRNVCSNLLVQFEYG-----GNRKTVDV-----SA 835
Query: 2230 TPGDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRKVVLYM 2409
+ G+PVGILAAT++++PAY A +S+Q + S W +++E L + N + DR+VV+Y+
Sbjct: 836 SAGEPVGILAATAVSNPAYAAVL-SSSQSNTSSWNLMKEILFCKQNSSEELDDRRVVVYL 894
Query: 2410 KNC-CGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEYQERWFDA 2586
++C CG KK+ C E +A +Q LK L+ F FV Y +
Sbjct: 895 QDCHCG------KKY---------CKENMACMVQRHLKGVPLKDFTAEFFVVYDNQIPTT 939
Query: 2587 ----ELRAPLLGHIQLDAKRLMGASLSPATLEGFLYDNLRKKSHPLNSFVDNLRLQACDA 2754
++ A L+GHI LD +L G +++ + + +++RKK+ P LR + +
Sbjct: 940 SEIRQIEANLVGHIHLDKMQLSGLNVTVQDILLKVTNDIRKKNSPFRGHSKKLRFSSSEE 999
Query: 2755 CDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSD-----LYLMVDVLYPRLAETT 2919
C + Q S + + PCL F K H D L+L V+ +YPRL E
Sbjct: 1000 CRVGQASDGNWSSVPCLQF----------KYHDRVLCGDDTGKVLHLFVNTIYPRLLEMI 1049
Query: 2920 VKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALHS 3099
V+GD R+ V I W + ++ +WV +K + + QRGDAW L S
Sbjct: 1050 VQGDSRVNMVNIIWIDPDAPSWV--RKPCKKERGEIALEVVIDKNVVKQRGDAWRTFLDS 1107
Query: 3100 LLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASC 3279
LP M L+D R IPY + ++ + LG+++A+ L QRL+ +L + KG + HLLL+A
Sbjct: 1108 CLPVMNLIDIKRSIPYGIKQIEEYLGISSAFDLTFQRLSKSLSKVAKGILREHLLLVADN 1167
Query: 3280 MTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCC 3459
M LTGK++ +N +G+K L+ S+K P+PFTE TL TP+K FE+AAE D LSG VASC
Sbjct: 1168 MALTGKLVGFNTSGYKALFRSLKVPLPFTEATLYTPMKCFEKAAEGRNKDSLSGIVASCS 1227
Query: 3460 WGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIG 3639
WGK VGTG+ FE+ W + + + P E D Y+ L ++ E + C+G
Sbjct: 1228 WGKLVAVGTGTRFEVTWNNKQ-VEVPHE---YSTDVYDFLHLVSTPGANE---IDNSCLG 1280
Query: 3640 EDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDTSCWNQQQATNGDGP 3819
D+D N F + + + F + +D D W G
Sbjct: 1281 MDVDN-------MNEDKF-HAMSPEPLSAMDKPTFDGSPEVIDLDDD-WPHGNGKFGKS- 1330
Query: 3820 DWNLPSSAADDV----GWNKPASNGDGAA----------WNQPTSVTEDVAWSKPASNG- 3954
W++ S A GW + D A W + S E V +S SNG
Sbjct: 1331 SWDVAKSPARPSGGWGGWGVEEKSEDHQAATDNPNGWGGWGKGKSDKEKVEFSTVKSNGW 1390
Query: 3955 -DGAD------WNQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVGWS---KPAGN 4104
DG D W ++ WG N DG D ++ GWS P
Sbjct: 1391 EDGGDTSTKCGWEGAANSPPKSDGRLWGSEKEN-DGKDLLPTNNSN---GWSVAKTPRNE 1446
Query: 4105 GDDGGSWK-KPTTNGDDIGWNQTAAAPEDD 4191
W+ P + GWN + DD
Sbjct: 1447 SFSTSGWEGAPKSPPKSEGWNWGSEKQNDD 1476
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 733 bits (1893), Expect = 0.0
Identities = 474/1431 (33%), Positives = 739/1431 (51%), Gaps = 66/1431 (4%)
Frame = +1
Query: 97 IQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKI 276
I+ + K + AS+L+LKV S++ L + +W FL + R LLP E ++LKKI
Sbjct: 130 IREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNFT--RTLLPCEVKEMLKKI 187
Query: 277 PEKIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSV 453
P + KK+ DG IL +PVPPNC+ +P+ G TV SD V MLKKI+ V
Sbjct: 188 PNETRKKLAGRGY-YPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQV 246
Query: 454 QD-KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNP--GSNAQGSDEFSKS 624
+ K S G F H+ +LQ QYL+V G K S + G N + +D +K+
Sbjct: 247 EIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKA 306
Query: 625 FANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEK 804
WL+KMR+LFI K G SSR V+TGD Y+ + EIG+P E+A+R+T EE V+V N
Sbjct: 307 ----WLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 362
Query: 805 IRKMVEGGKCHTLSRKDGAKFFGEAMKLSGN--IEVGDLINRSLQEGDIVFINRPPSIHK 978
++++V+ C L+ +DG+ + G+ ++ G +++R + +GDIVFINRPP+ HK
Sbjct: 363 LQELVDKKLC--LTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHK 420
Query: 979 HSIQAMRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQIF 1158
HS+QA+RV+LH + INPLICGPL DFDGDC+H F+P+S+ +KAE+L L SV+KQ+
Sbjct: 421 HSLQALRVYLHDDHVVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLL 480
Query: 1159 SSHSGEANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLWT 1338
SSHSG N+ L D+LL+ K++ + F+ KA QLAM+ +P PA+L +GS WT
Sbjct: 481 SSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWT 540
Query: 1339 AVQVIQTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALEC 1518
A+Q++QTVLP + + G+ LIK+ D D+ + ++EI S+ + G E L+
Sbjct: 541 ALQILQTVLPASFDCHGDSYLIKNSNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKF 600
Query: 1519 LHSLECILVEWLSSSGFSVSIEDFVLPAS--ATLKNDLSEISKLIRYMGVGSYQTNILSQ 1692
SL+ +L+E + S GFSV ++D+ +P + L+ ++ +S L+ Y ++ + Q
Sbjct: 601 FDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLL-YQLRSTFNELVELQ 659
Query: 1693 VERGVKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQF-----FHGKNAI 1857
+E ++ ++ I +S K+ D S + +++VQQ+GFLG+Q F+ K+ I
Sbjct: 660 LENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLI 719
Query: 1858 PSDWQKRLHTHLPCGESSFLQEYEVESPEVH-GFITSSFISGLNPCEAFIHSVHSREGLL 2034
D H +++ P G + F GL+P E +HS+ +RE ++
Sbjct: 720 -EDVASLFHNR--------YSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMV 770
Query: 2035 SQKMGLKEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGH 2214
GL EPG LFKNLMA LRDV +CYDGTVRN C N ++Q +YG G
Sbjct: 771 RSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYG----------MKAGM 820
Query: 2215 FVEKS--TPGDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRD 2388
S PG+PVG+LAAT++++PAYKA D ST S S W++++E L + + + D
Sbjct: 821 MQPYSLFPPGEPVGVLAATAMSTPAYKAVLD-STPSSNSSWDMMKEILLCKVSFKNEPID 879
Query: 2389 RKVVLYMKNC-CGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEY 2565
R+V+LY+ NC CG +K+ C E A ++ LKK L+ A++ +EY
Sbjct: 880 RRVILYLNNCACG------RKY---------CNENAAYVVKSHLKKVTLKDAAMDFMIEY 924
Query: 2566 QERWFDAELRAPLLGHIQLDAKRLMGASLSPATLEGFLYDNLRKKSHPLNSFVDNLRLQA 2745
+ + L L+GH+ L+ L ++ + + + LR
Sbjct: 925 NRQPTPSGLGPGLVGHVHLNRMLLKELNIDMTEVLRRCQETMSSFKKKKKKIAHALRFSI 984
Query: 2746 CDACDIAQRSGNDGFAKPCLHF-ALTKESYLASKGHSHSFYSDLYLMVDVLYPRLAETTV 2922
+ C Q +G + PCL F T++ +L H ++ D+++P L+ET +
Sbjct: 985 SEHCAFHQWNGEESIDMPCLIFWHQTRDVHLERTAH---------ILADIVFPLLSETII 1035
Query: 2923 KGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALHSL 3102
KGD RI++ + W + +S +W K +R + Q GDAW L
Sbjct: 1036 KGDPRIKSASVIWISPDSTSW--QKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCC 1093
Query: 3103 LPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCM 3282
LP + L+D R +PY++ +V +LLG++ A+ +IQRL+ ++ ++ KG +HL+L+A+ M
Sbjct: 1094 LPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSM 1153
Query: 3283 TLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCW 3462
T TG +I +N+ G+K L ++ VPFTE TL TP K FE+AAE+ D LS VASC W
Sbjct: 1154 TCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSW 1213
Query: 3463 GKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIGE 3642
GK VGTGS F+I W E C + D + L + G+ +P+S C+GE
Sbjct: 1214 GKHVAVGTGSRFDILWDQ-------KELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGE 1266
Query: 3643 DMDMDVCLQ-------------SLTNGSIFGNKAG----TDSFPRNKQSNFGRNKPAMDQ 3771
+++ D+ ++ S + +F + A D++P + + A+
Sbjct: 1267 EIE-DIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVST 1325
Query: 3772 DTSCWNQQQ---ATN-GDGPDWN-LPSSAADDVGWNKPASNGDGAAW-------NQPTSV 3915
W + ATN DG DW+ A DV N +AW N+ T+
Sbjct: 1326 GGGQWESNENGKATNSSDGNDWSGWGRKAEPDVTVTNAQENTSNSAWDTTSSWGNKATNS 1385
Query: 3916 TEDVAWSK-----------------PASNGDGADWNQPNQPTSATEDVGWGKPVSNGDGA 4044
+ D WS P S G W+ + + T+D + + + +
Sbjct: 1386 SNDNDWSNCSTKEVERDSFTSMEKTPKSGG----WDSASTWGTKTKDDSFKRETAPKKSS 1441
Query: 4045 DWS--QQTSAAEDVGWSKPAGNGDDGGSWKKPTTNGDDIGWNQTAAAPEDD 4191
WS Q+ A + K A G W +D W++ + ED+
Sbjct: 1442 QWSGLQKDKAETQDAFHKKAEMASKSGGW-------EDKAWSRGTSKTEDN 1485
>ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Oryza
brachyantha]
Length = 1993
Score = 728 bits (1880), Expect = 0.0
Identities = 477/1454 (32%), Positives = 731/1454 (50%), Gaps = 87/1454 (5%)
Frame = +1
Query: 76 RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 255
RD P ++ + + A LELK + + + W FL ++ R LLP EA
Sbjct: 128 RDLPALSLKENKTADGAVRLELKAPPRKFMTEGSWNFLDKYGFHHGGTSHC-RTLLPEEA 186
Query: 256 SKILKKIPEKIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 432
ILKKIP++ +K+ + G ++ +PVPPNC+ IP+ G ++ D + +L
Sbjct: 187 LNILKKIPDETKRKLAARGY-IAQPGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISISLL 245
Query: 433 KKIVSSVQD-KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQG-- 603
KK++ ++ K+S G F H+ + +LQ QY+ + G TT P N +
Sbjct: 246 KKVLQKIEQIKKSRAGSPNFESHEVESSDLQLSIAQYIHLRG-----TTRGPQDNTKRFS 300
Query: 604 -SDEFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEW 780
S + S WL+KMR+LFISK G SSR V+TGD Y G+ +G+P E+AKR+T EE
Sbjct: 301 ISTDSSALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDMVGLPSEVAKRITFEEQ 360
Query: 781 VTVFNKEKIRKMVEGGKCHTLSRKDGAKFFGEAMKLSGN--IEVGDLINRSLQEGDIVFI 954
VT N K++++V+ G C L+ +DG + + G+ ++VG I+R + +GDIVF+
Sbjct: 361 VTNININKLQEIVDKGLC--LTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDIVFL 418
Query: 955 NRPPSIHKHSIQAMRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQL 1134
NRPPS HKHS+QA R ++H T+ INPLIC P DFDGDC+H ++P+SL +KAE L+L
Sbjct: 419 NRPPSTHKHSLQAFRAYVHEDHTVKINPLICSPFAADFDGDCVHIYYPQSLAAKAEALEL 478
Query: 1135 LSVDKQIFSSHSGEANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILS- 1311
SV+KQ+ SSHSG+ N+ L D+LLA K +S + K QLAM S+P PA++
Sbjct: 479 FSVEKQLTSSHSGKVNLQLANDSLLALKHMSFRTILSKEVANQLAMNVTYSLPKPALIKS 538
Query: 1312 -PHNGSSLWTAVQVIQTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVE 1488
PH WT Q++Q LP ++ +G+K L++ I +D DK +Q + S++ S +
Sbjct: 539 RPH-----WTIAQIVQGALPKDLTSQGDKHLVRDSTIIKLDLDKESVQTSFSDLLYSTLS 593
Query: 1489 EDGSERALECLHSLECILVEWLSSSGFSVSIEDFVLPASATLKNDLSEISKLIRYMGVGS 1668
G AL+ L+ L+ +L+E + GFSVS++DF +P K L E K I +
Sbjct: 594 VKGPGEALQFLNVLQPLLMELILLDGFSVSLQDFNVP-----KVHLQEAQKNIEKQSIIL 648
Query: 1669 YQTN------ILSQVERGVKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGI 1830
Q+ + +V+ +KD++ +I + + +ID S S S++VQQ+GF+G+
Sbjct: 649 EQSRCAENQFVEMRVDNNLKDIKQQISDFVVKRSHLGLLIDPKSDPSVSKVVQQLGFVGL 708
Query: 1831 QF-----FHGKNAIPSDWQKRLHTHLPCGESSFLQEYEVESPEVHGFITSSFISGLNPCE 1995
Q F+ + + + ++ H + SPE +G + SS+ GLNP E
Sbjct: 709 QLYREGKFYSRRLVEDCFSNFVNKHPAVRKE--------HSPEAYGLVRSSYFHGLNPYE 760
Query: 1996 AFIHSVHSREGLLSQKMGLKEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKF 2175
+H++ +RE ++ GL EPG LFKNLMA LRDV +CYDGTVRN C ++Q +Y +
Sbjct: 761 ELVHAISTREAIVRSSRGLTEPGTLFKNLMALLRDVVICYDGTVRNVCSKSIIQLKYKEE 820
Query: 2176 DDNGXXXXXXXGHFVEKSTPGDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLK 2355
D F PG+PVG+LAAT+I++PAYKA DAS + S WE ++E L+
Sbjct: 821 D---------ALDFPSAIAPGEPVGVLAATAISNPAYKAVLDASQSNNTS-WERMKEILQ 870
Query: 2356 GRDNGVLKHRDRKVVLYMKNCCGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILE 2535
+DRK++L++ +C A KKF C EK A +Q L++ LE
Sbjct: 871 TTTRYKNDTKDRKIILFLNDCSCA-----KKF---------CKEKAAIAVQGCLRRITLE 916
Query: 2536 SFAVNIFVEYQERWF---DAELRAPLLGHIQLDAKRLMGASLSPATLEGFLYD---NLRK 2697
A +I +EYQ++ +E L+GHI D L ++S + + K
Sbjct: 917 DCATDICIEYQKQISLDGTSEASPALVGHIHFDRAHLERINVSIEDIFQKCQEVSGKYGK 976
Query: 2698 KSHPLNSFVDNLRLQACDACDIAQRSGNDGFAK-PCLHFALTKESYLASKGHSHSFYSDL 2874
K L+ N+ CD C Q+ + AK PCL F + + + S+ S +
Sbjct: 977 KKGHLSHLFKNITFSICD-CSFTQKLIDGKLAKVPCLQFFFPESNTMLSE----SVEGAV 1031
Query: 2875 YLMVDVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXX 3054
L+ D + L T +KGD RI+ +I W ++ +WV + K +
Sbjct: 1032 NLLADSVCGVLLNTIIKGDPRIQEAKIVWVGSDATSWVKNTK--KESKGEPAVEIIVEEQ 1089
Query: 3055 XXTQRGDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELL 3234
GD+W + + +P ++L+D R IPY + ++ +LLG++ A+ ++QRL+ + ++
Sbjct: 1090 EALHTGDSWRITMDACIPVLDLIDTRRSIPYGIQQLRELLGISCAFDQVVQRLSTTVRMV 1149
Query: 3235 GKGAYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAE 3414
K K+HL+L+A+ MT TG + +N AG+K + S+K VPFTE TL TP+K FE+AAE
Sbjct: 1150 AKDVLKDHLVLVANSMTFTGNLNGFNTAGYKTTFRSLKVQVPFTESTLITPMKCFEKAAE 1209
Query: 3415 EGVVDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGV 3594
+ D L V+SC WGK A GTGS+F+I W E K +E + L Y+ L ++
Sbjct: 1210 KCHSDSLGCVVSSCSWGKYAASGTGSSFQILWN--ESQLKSNKEYGDGL--YDYLALVRT 1265
Query: 3595 DSEGEKVK--PSSLCIGEDMDMDVCLQSLTNGSI----FGNKAGTDSFPRNKQSNFGR-- 3750
D E + + E+ + DVCL G+I F + F +N G
Sbjct: 1266 DEEKARYTFFDDVDYLAEENETDVCLSPELEGTIGQPTFDDNLEEQDFQKNNSWENGTAA 1325
Query: 3751 --------------------NKPAM----------DQDTSCWNQQQATNGDGPDW----- 3825
N A+ DQ+ SCW+ A DW
Sbjct: 1326 NGSWEQNGSAGDDSDKWGGWNAAAVGADTAVTKQADQEKSCWDVPAAVEKSSSDWGGWGT 1385
Query: 3826 -------NLPSSAADDVGW-NKPASNGDGAAWNQPTSVTEDVAWSKPASNGDGADWNQPN 3981
NLP A+ W K + +G W + S++++ N D W N
Sbjct: 1386 EKRKVKENLPEEPAEHDAWLAKRSMDGGDINWGKQPSISDEF-----KKNVDQGSWG--N 1438
Query: 3982 QPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVG---------WSKPAGNGDDGGSWKKP 4134
SA E+ W K +G A W++Q+S D G W + G G +GGSW+K
Sbjct: 1439 MSLSA-ENRAWDKKKPDGGDATWNKQSSTQNDGGDTWEKQPSAWKENKGRGSNGGSWEK- 1496
Query: 4135 TTNGDDIGWNQTAA 4176
+N W A
Sbjct: 1497 -SNSQKGSWGNDEA 1509
>ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Setaria
italica]
Length = 2038
Score = 726 bits (1875), Expect = 0.0
Identities = 475/1437 (33%), Positives = 740/1437 (51%), Gaps = 73/1437 (5%)
Frame = +1
Query: 76 RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 255
RD P ++ + + A LEL+ + H+ + W FL ++ R+LLP EA
Sbjct: 129 RDIPALSLKETKTTDGAIRLELRAPPRKHMTERSWNFLDKYGFHYGGSAHS-RLLLPEEA 187
Query: 256 SKILKKIPEKIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 432
ILKK+P+ +K+ V+S G ++ +PVPPNC+ IP+ G ++ D + +L
Sbjct: 188 LNILKKVPDDTRRKLAARGYTVQS-GYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALL 246
Query: 433 KKIVSSVQD-KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQ--- 600
KK++ ++ K+S G F H+E + ++Q QY+ + G TT P N++
Sbjct: 247 KKVLQKIEQIKRSRSGSPNFESHEEESCDIQLAVGQYIHLRG-----TTRGPQDNSKRFA 301
Query: 601 -GSDEFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEE 777
G+D + S WL+KMR+LFISK G SSR V+TGD Y G+ IG+P E+AKR+T EE
Sbjct: 302 VGTDTAALSTKQ-WLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEE 360
Query: 778 WVTVFNKEKIRKMVEGGKCHTLSRKDGAKFFGEAMKLSGN--IEVGDLINRSLQEGDIVF 951
VT N +++++V+ G C L+ +DG + + G+ ++VG I+R + +GD+VF
Sbjct: 361 QVTDININRLQEVVDKGLC--LTYRDGKDTYAITVGSKGHTTLKVGQTISRRIVDGDVVF 418
Query: 952 INRPPSIHKHSIQAMRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQ 1131
+NRPPS HKHS+QA ++H T+ INPL+C P DFDGDC+H ++P+SL +KAE L+
Sbjct: 419 LNRPPSTHKHSLQAFYAYVHDDHTVKINPLMCSPFSADFDGDCVHIYYPQSLAAKAEALE 478
Query: 1132 LLSVDKQIFSSHSGEANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILS 1311
L SV+KQ+ SSHSG+ N+ L D+L+A K +S + K QLAM+ S+P PA++
Sbjct: 479 LFSVEKQLISSHSGQVNLQLGNDSLVAMKAMSSRTMLSKELANQLAMFVPFSLPAPAVIK 538
Query: 1312 PHNGSSLWTAVQVIQTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEE 1491
WT Q++Q LP + +G L++ G I +D DK +QD+ +++ S++ E
Sbjct: 539 ---SIPAWTITQIVQGALPAKLTCQGKTHLVRDGNIIKLDLDKDHVQDSFNDLVSSVLSE 595
Query: 1492 DGSERALECLHSLECILVEWLSSSGFSVSIEDFVLPASATLKNDLSEISKLIRYMGVGSY 1671
G AL+ L+ L+ +L+E+L GFSV+++DF +P K L E+ K I+ +
Sbjct: 596 KGPGEALQFLNVLQPLLMEFLLLDGFSVTLKDFNVP-----KAILEEVHKNIQKQSLILE 650
Query: 1672 QTNILS------QVERGVKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQ 1833
Q+ +VE +K ++ +I + + +ID S S++VQQ+GF+G+Q
Sbjct: 651 QSRFSKSQIAEMRVENNLKGVKQQISEFVIKCSDLGLLIDPKKEASMSKVVQQLGFVGLQ 710
Query: 1834 FFHGKNAIPSDWQKRLHTHLPCGESSFLQEYEVESPEVHGFITSSFISGLNPCEAFIHSV 2013
+H S + ++ S E+ PE +G + SS+ GLNP E +HS+
Sbjct: 711 LYHEGKLYSSRLVEDCFSNFVNKHSDIGDEHP---PEAYGLVQSSYFHGLNPYEELVHSI 767
Query: 2014 HSREGLLSQKMGLKEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXX 2193
+RE ++ GL EPG LFKNLMA LRDV +CYDGTVRN C N ++Q +Y + D+
Sbjct: 768 STREAIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQLKYKEDDETD-- 825
Query: 2194 XXXXXGHFVEKSTPGDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGV 2373
F PG+PVG+LAAT+I++PAY+A D+S + S WE ++E L+ +
Sbjct: 826 -------FPSALPPGEPVGVLAATAISTPAYRAVLDSSQSNNAS-WESMKEILQTKVGYK 877
Query: 2374 LKHRDRKVVLYMKNCCGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNI 2553
+DRKV+L++ +C KKF C E+ A +Q L++ L A +I
Sbjct: 878 NDMKDRKVILFLNDCS-----CPKKF---------CKERAALTVQSCLRRVTLADCATDI 923
Query: 2554 FVEYQERWF---DAELRAPLLGHIQLDAKRLMGASLSPATL----EGFLYDNLRKKSHPL 2712
+E+Q++ +E L+GHI LD +L ++S + E +KK H
Sbjct: 924 SIEHQKQINLDETSEAAPTLVGHIHLDKAQLERINISTQDILQKCEEISGRYGKKKGHLC 983
Query: 2713 NSFVDNLRLQACDACDIAQRSGNDGF--AKPCLHFALTKESYLASKGHSHSFYSDLYLMV 2886
+ F + CD C AQ + DG+ PC+ F+ + ++ + S+ + + ++
Sbjct: 984 HLF-KKITFSTCD-CSFAQNT-IDGYLHVAPCVQFSFSDDNTILSESVERA----VNVIA 1036
Query: 2887 DVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQ 3066
D + L +T +KGD RI++ +I W E+ +WV K T+N
Sbjct: 1037 DSVCSVLLDTIIKGDPRIQSAKIIWVESEATSWV---KNTQNTLKGEPTLEIIVEKDEAV 1093
Query: 3067 R-GDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKG 3243
R G AW + + +P + L+D R IPY + +V +LLG++ A+ ++QRL+ ++++ KG
Sbjct: 1094 RNGYAWRTVMDACIPVLNLIDTRRSIPYGIQQVKELLGISCAFDQVVQRLSTTVKMVAKG 1153
Query: 3244 AYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGV 3423
K+HL+L+A+ MT TG +I +N +G+K + S+K VPFTE TL TP+K FE+AAE+
Sbjct: 1154 VLKDHLILVANSMTCTGNLIGFNTSGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCD 1213
Query: 3424 VDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSE 3603
D L V+SC WGK A +GTGS+F+I W E K +E + L Y+ L ++ D E
Sbjct: 1214 SDSLGCVVSSCSWGKHAAIGTGSSFQILWN--ENQLKSNKEYGDGL--YDFLALVRTDQE 1269
Query: 3604 GEK---VKPSSLCIGEDMDMDVCL-------------------QSLTNGSIFGN------ 3699
+ + E+ DVCL Q + NGS + N
Sbjct: 1270 KAGYAFLDDVDYLVEENAVDDVCLSPEPDGTHGKPTFEDNVEEQGIQNGSSWENDTTMNS 1329
Query: 3700 ------KAGTDSFPRNKQSN--FGRNKPAMDQDTSCWNQQQATNGDGPDW---------- 3825
AG DS SN KP +DQD SCW+ + DW
Sbjct: 1330 SWEQNASAGNDSGDWGGWSNGAAAATKP-LDQDNSCWDAHATVENNSTDWGGWGTEKQTN 1388
Query: 3826 --NLPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVAWSKPASNGDGADW-NQPNQPTSA 3996
+ D G +S GD W +S E K N D W N P +++
Sbjct: 1389 GEQAEINTWADKGAGMESSAGDD-NWEMKSSAPE-----KSKKNLDHDTWGNMPAPASAS 1442
Query: 3997 TEDVGWGKPVSNGDGADWSQQTSAAEDVGWSKPAGNGDDGGSWKKPTTNGDDIGWNQ 4167
+ WG+ +G W +QT G K G D SW K T W++
Sbjct: 1443 ASENTWGEQKGDGGDGAWEKQT------GSCKEQGMDVDQDSWGKKTMPPSSNMWDK 1493
>ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Brachypodium
distachyon]
Length = 1935
Score = 726 bits (1874), Expect = 0.0
Identities = 466/1406 (33%), Positives = 739/1406 (52%), Gaps = 40/1406 (2%)
Frame = +1
Query: 76 RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 255
+D P ++ + A LEL+ + + D W FL ++ R LLP EA
Sbjct: 109 KDVPALSLKEVKTADGAFRLELRAPPRRLMKDSSWNFLDKYGFHHGGASHF-RTLLPEEA 167
Query: 256 SKILKKIPEKIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 432
ILKKIP+ KK+ +S G ++ +PVPPNC+ IP+ G ++ D + +L
Sbjct: 168 LNILKKIPDDTRKKLAARGYIAQS-GYVMKYLPVPPNCLYIPEFTDGQSIMSYDISISLL 226
Query: 433 KKIVSSVQD-KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSD 609
KKI+ ++ K+S G F H+ + +LQ QY+ + G K + + S
Sbjct: 227 KKILHRIEQIKKSRAGTPNFESHEAESSDLQISIAQYIHLRGTTKGPQDTKRFTISTDSS 286
Query: 610 EFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTV 789
S WL+KMR+LFISK G SSR V+TGD Y G+ +G+P E+AKR+T EE VT
Sbjct: 287 HLS---TKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVVGLPSEVAKRITFEEQVTD 343
Query: 790 FNKEKIRKMVEGGKCHTLSRKDGAKFFGEAMKLSG--NIEVGDLINRSLQEGDIVFINRP 963
N ++++++V+ G C L+ +DG + + G ++VG I+R + +GD+VF+NRP
Sbjct: 344 INIKRLQEVVDKGLC--LTYRDGQTTYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRP 401
Query: 964 PSIHKHSIQAMRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSV 1143
PS HKHS+QA V++H T+ INPLIC PL DFDGDC+H ++P+SL +KAE L+L SV
Sbjct: 402 PSTHKHSLQAFYVYIHDDHTVKINPLICSPLAADFDGDCVHIYYPQSLAAKAEALELFSV 461
Query: 1144 DKQIFSSHSGEANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNG 1323
+KQ+ +SH+G+ N+ L+ D+LLA K +S + K + QLAM S+PDPA++
Sbjct: 462 EKQLTNSHNGKVNLQLSNDSLLALKHMSSRTVLSKESANQLAMLLSFSLPDPAVVKL--- 518
Query: 1324 SSLWTAVQVIQTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSE 1503
WT Q+IQ LP + +G + L+K + +D K +Q + S++ S++ G
Sbjct: 519 KPCWTITQIIQGALPAALTCEGGRFLVKDSTVIKLDLAKESVQASFSDLVSSILCVKGPG 578
Query: 1504 RALECLHSLECILVEWLSSSGFSVSIEDFVLPASATLKNDLSEISKLIRYMGVGSYQTN- 1680
AL+ L++L+ +L+E+L GFSVS++DF +P K L E+ K I+ + Q+
Sbjct: 579 GALQFLNALQPLLMEYLLLDGFSVSLQDFNVP-----KVLLEEVHKSIQEQSLVLEQSRC 633
Query: 1681 -----ILSQVERGVKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQF--- 1836
+ +V+ +KD++ +I + S+ +ID S S S++VQQ+GF+G+Q
Sbjct: 634 SKSQFVEMRVDNNLKDVKQQISDFVVESSHLGLLIDPKSEPSMSKVVQQLGFVGLQLYRE 693
Query: 1837 --FHGKNAIPSDWQKRLHTHLPCGESSFLQEYEVESPEVHGFITSSFISGLNPCEAFIHS 2010
F+ + + + H P + PE +G + +S+ GLNP E +HS
Sbjct: 694 GKFYSSRLVEDCFSSFVDKHPPIVGNQ-------HPPEAYGLVQNSYFHGLNPYEELVHS 746
Query: 2011 VHSREGLLSQKMGLKEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGX 2190
+ +RE ++ GL EPG LFKNLMA LRDV +CYDGTVRN C N ++Q +Y + D
Sbjct: 747 ISTREAIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNICSNSIMQLKYNEDDAT-- 804
Query: 2191 XXXXXXGHFVEKSTPGDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNG 2370
TPG+PVG+LAAT+I++PAYKA DAS + S W ++E L+ + +
Sbjct: 805 -------DIPSALTPGEPVGVLAATAISNPAYKAVLDASQSNNTS-WASMKEILQTKVSY 856
Query: 2371 VLKHRDRKVVLYMKNCCGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVN 2550
DRKV+L++ +C KKF C EK A +Q+ LK+ LE A +
Sbjct: 857 KNDTNDRKVILFLNDCS-----CPKKF---------CKEKAAIAVQNRLKRVTLEDCATD 902
Query: 2551 IFVEYQERWFD--AELRAPLLGHIQLDAKRLMGASLSPATL----EGFLYDNLRKKSHPL 2712
I +EY ++ D +E L+GHI L+ RL ++S + + + +KK H L
Sbjct: 903 ICIEYHKQILDGSSEATPALVGHIHLEKARLDMINVSTEDILQKCQEVSLKHGKKKGH-L 961
Query: 2713 NSFVDNLRLQACDACDIAQRSGNDGFAK--PCLHFALTKESYLASKGHSHSFYSDLYLMV 2886
+ CD C Q+ DG PCL F+ +++ + S+ S + ++
Sbjct: 962 GHLFKKITFSTCD-CSFTQKPMIDGKLPKVPCLQFSFSEDIPMLSE----SVERAVSVLA 1016
Query: 2887 DVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRN-KXXXXXXXXXXXXXXXT 3063
+ L L +T +KGD RI+ +I W ++++WV K TR +
Sbjct: 1017 NSLCDVLLDTIIKGDPRIQEAKIMWVGSDAQSWV---KNTRKVSKGEPTVEIVVEKNEAS 1073
Query: 3064 QRGDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKG 3243
++GDAW A+ + +P ++L+D R IPY + +V +LLG++ ++ I+QRL+ ++ + KG
Sbjct: 1074 KQGDAWRIAMDACIPVIDLIDTRRSIPYGIQQVRELLGISCSFDQIVQRLSTTMKTVAKG 1133
Query: 3244 AYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGV 3423
K+HL+L+A+ MT TG + +N G++ + ++K VPFTE TL TP+K FE+AAE+
Sbjct: 1134 ILKDHLILVANSMTCTGNLYGFNTGGYRATFRALKVQVPFTESTLFTPMKCFEKAAEKCH 1193
Query: 3424 VDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSE 3603
D L V+SC WGK A +GTGS+F+I W E K +E + L Y+ L ++ D E
Sbjct: 1194 SDALGCVVSSCSWGKHAALGTGSSFQILWN--ENQLKSNKEYGDGL--YDFLAMVRTDQE 1249
Query: 3604 GEK---VKPSSLCIGEDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQD 3774
+ + + ++ D+CL NG+ G D+F N G + +
Sbjct: 1250 KARYTFLDDVDYLVEDNAMDDICLSPELNGT-HGVPTFEDNFEHQDTQN-GNSWENGTKA 1307
Query: 3775 TSCWNQQQATNGDGPDWN--LPSSAADDVGWNKPASNGDGAAWNQPTSVTEDV----AWS 3936
+ W Q + D +W ++AA D G KPA G+ ++W+ P + D W
Sbjct: 1308 NASWEQNASAGNDSDNWGGWSNAAAAADTGAAKPADQGN-SSWDVPATAENDSTDWGGWG 1366
Query: 3937 KPASNGDGADWNQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVG-------WSKP 4095
+ + +P + D G K ++G G W +QT+ ED G W+K
Sbjct: 1367 NEKAKDNRTVSTEPAE-LDTWSDRG-AKKGTDGGGGSWGKQTNTCEDSGTNLERNSWAK- 1423
Query: 4096 AGNGDDGGSWKKPTTNGDDIGWNQTA 4173
+ +W K ++G D W++ A
Sbjct: 1424 RPSSPSLSTWAKKNSDGGDGTWDKQA 1449
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 721 bits (1860), Expect = 0.0
Identities = 477/1402 (34%), Positives = 710/1402 (50%), Gaps = 50/1402 (3%)
Frame = +1
Query: 133 LELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMKKICV-- 306
L+LK+ S +W FL + R+LLP E +IL++IPE+ KK+
Sbjct: 141 LQLKLPSNKKPPPGFWNFLERYGFRYGDGVK--RILLPREVMQILRRIPEETKKKLATRG 198
Query: 307 -NPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQSTMG 477
NP DG IL+ IPVPPNC+ +P+ G T+ +D + MLKK++ V++ S G
Sbjct: 199 YNP----QDGYILNHIPVPPNCLSVPEISDGVTIISADPSISMLKKVLRRVEEISSSRSG 254
Query: 478 KNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFSKSFANFWLDKMRS 657
F + LQ QYL+V G K S + + G+ E S+S WL+KMR+
Sbjct: 255 AANFESEIDEVDLLQESVDQYLQVRGTGKASRESD--ARFGGTKELSESSTKAWLEKMRT 312
Query: 658 LFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEGGKCH 837
LFI K G SSR V+TGD YR + E+GIP +IA+R+T EE V N +++++V+ C
Sbjct: 313 LFIRKGSGFSSRTVITGDAYRRVNEVGIPYDIAQRITFEEKVNAHNIRRLQELVDSKLCL 372
Query: 838 TLSRKDGAKFFGEAMKLSGNIEVGDLINRSLQEGDIVFINRPPSIHKHSIQAMRVFLHPG 1017
T S E K ++ G +++R + +GD+VF+NRPP+ HKHS+QA++V++H
Sbjct: 373 TYSDGSSTYSLREGSKGHTFLKPGQVVHRRIMDGDLVFVNRPPTTHKHSLQALQVYVHED 432
Query: 1018 KTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQIFSSHSGEANIVLTV 1197
K + INPLICGPL DFDGDC+H F+P+SL +KAE+++L SV+KQ+ SSHSG+ N+ L
Sbjct: 433 KVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVMELFSVEKQLLSSHSGKPNLQLAT 492
Query: 1198 DTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLWTAVQVIQTVLPDNM 1377
D+LL+ KL+ + F +KA M QLAM+ S+P PA+L ++ WTA+Q++QT LP
Sbjct: 493 DSLLSLKLMFKKYFFNKAAMQQLAMFVSSSLPQPALLKANSTVPCWTALQILQTALPAQF 552
Query: 1378 NLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALECLHSLECILVEWLS 1557
G++ L+K + +D + +++I S+ E +E L +S++ +L+E L
Sbjct: 553 QSSGDRHLVKDSEVLLLDCSTSLVPSLINDIGTSIFFEKSAEDVLSFFNSMQPLLMENLF 612
Query: 1558 SSGFSVSIEDFVLPASA--TLKNDLSEISKLIRYMGVGSYQTNILSQVERGVKDLQNKII 1731
S GFSV +EDF LP ++ ++ L EIS L+ +M Y + Q+E ++ ++ +
Sbjct: 613 SEGFSVGLEDFALPRASIQDIQKGLKEISPLLFHMRT-VYNELVEMQLENHIRKVKEPVS 671
Query: 1732 REIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQFFHGKNAIPSDWQKRLHTHLPCGESS 1911
I +S++ +ID S + +++VQQVGFLG Q + Q +L++ + S
Sbjct: 672 NFILNSSALGDLIDSKSDSAMNKVVQQVGFLGRQLYD---------QGKLYSKTLVEDVS 722
Query: 1912 FLQEYEVESPEV------HGFITSSFISGLNPCEAFIHSVHSREGLLSQKMGLKEPGVLF 2073
L + + S V G + F+ GL+P E IHS+ +RE ++ GL EPG LF
Sbjct: 723 SLYQNKYPSDIVDYPSAEFGLVHRGFVHGLDPVEGMIHSIATREVIVRSSRGLSEPGTLF 782
Query: 2074 KNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGHFVEKSTP-GDPVG 2250
KNLMA LRDV +CYDGTVRN C N ++QF+YG +G E P G+PVG
Sbjct: 783 KNLMATLRDVVICYDGTVRNVCSNSIIQFEYGVKSGSGP----------ENLFPAGEPVG 832
Query: 2251 ILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRKVVLYMKNCCGAG 2430
+LAAT++++PAYKA D ST S S W++++E L + N + DR+VVLY+ N CG G
Sbjct: 833 VLAATAMSNPAYKAVLD-STPSSNSSWDLMKEILLCKVNFKNELIDRRVVLYL-NDCGCG 890
Query: 2431 IFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEYQERWF--DAELRAPL 2604
+K+ C E A +++ LKK L+ AV +EYQ+ E+ + L
Sbjct: 891 ----RKY---------CREHAAYLVKNRLKKVSLKDTAVEFMIEYQKERAAGSMEIDSGL 937
Query: 2605 LGHIQLDAKRLMGASLSPA--------TLEGFLYDNLRKKSHPLNSFVDNLRLQACDACD 2760
+GH+ L+ L +L + T+ F + KK + + L + C
Sbjct: 938 VGHVHLNEMLLRELNLGMSEILQKCEETINSFRRKKVGKKMN-IGEIFKRTILSYSECCS 996
Query: 2761 IAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDL---------YLMVDVLYPRLAE 2913
Q S ++ PCL F FY D ++ D + P L +
Sbjct: 997 FHQSSADNRSGSPCLMF----------------FYQDFNNSELEAISQMLADFICPVLLK 1040
Query: 2914 TTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKAL 3093
T +KGD RI + I W N ES TW+ S ++ Q GDAW AL
Sbjct: 1041 TVIKGDPRISSANIIWINSESTTWIRSP--NKSLKGELALDVVLEKSVVKQSGDAWRIAL 1098
Query: 3094 HSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIA 3273
LP + L+D R IPY++ +V +LLGV+ A+ +QRL A+ ++ KG K HL+L+A
Sbjct: 1099 DCCLPVLHLIDTRRSIPYAIKQVQELLGVSCAFDQAVQRLAKAVAMVAKGVLKEHLILLA 1158
Query: 3274 SCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVAS 3453
+ MT G + +N G+K L ++ VPFTE TL TP K FERAAE+ +D LS VAS
Sbjct: 1159 NSMTCAGNFVGFNPGGYKALSRALNIQVPFTEATLFTPKKCFERAAEKCHMDSLSSIVAS 1218
Query: 3454 CCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLC 3633
C WGK VGTGS FEI W EG NE+ + L + + + ++
Sbjct: 1219 CSWGKHVAVGTGSRFEILWDTKEG-------GLNEVGGVDVFNFLHMVNAANGEELTTAA 1271
Query: 3634 IGEDMD--------MDVCLQSLTNGS----IFGNKAGTDSFPRNKQSNFGRNKPAMDQDT 3777
+G ++D DV L N S +F + FP N ++ G+
Sbjct: 1272 LGTEIDDLVPDYENGDVSLSPEHNSSSDKPVFEDIV---EFPDNFENVPGK--------- 1319
Query: 3778 SCWNQQQATNGDGPDWNLPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVA-W--SKPAS 3948
S W+ + G DW D G + +AW T +D + W +K A+
Sbjct: 1320 SSWDSIYTASTGGKDWGAVKIGTQD-GISAETQADSTSAWGIKTPREDDTSPWGTAKTAT 1378
Query: 3949 NGDGADWNQPNQPTSATEDVGWGKPVSNGDG-ADWSQQTSAAEDVGWSKPAGNGDDGGSW 4125
+ W A WG + D + W +A ED S D W
Sbjct: 1379 EDAPSAWGTKTVKEDAPS--AWGIKTAREDARSPWGTAKTATEDA--SSATAREDAPSPW 1434
Query: 4126 -KKPTTNGDDIGWNQTAAAPED 4188
T GD + T ED
Sbjct: 1435 GTAKTATGDALSAWGTKTLKED 1456
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2020
Score = 718 bits (1853), Expect = 0.0
Identities = 469/1395 (33%), Positives = 725/1395 (51%), Gaps = 38/1395 (2%)
Frame = +1
Query: 115 NENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMK 294
++ A +L LKV SKS + D +W+FL ++ R LLP EA +I+K+IP + K
Sbjct: 141 SDGACYLALKV-SKSKIHDGFWSFLEKYGYRYEGDET--RALLPCEAMEIIKRIPIETKK 197
Query: 295 KICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQS 468
K+ DG +L +PVPPNC+ +P+ G++V SD + +L+K++ V+ K S
Sbjct: 198 KLAGKGF-FPQDGYVLKYLPVPPNCLSVPEVSDGASVMSSDPSMTILRKLLRKVEIIKSS 256
Query: 469 TMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFSKSFANFWLDK 648
G+ F H +LQS+ QY ++ G K + + E + S WL+K
Sbjct: 257 RSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGV--NKELTASSTKAWLEK 314
Query: 649 MRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEGG 828
MR+LFI K G SSR V+TGD Y+ I E+GIP+E+A+R+T EE V + N ++K+V+
Sbjct: 315 MRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYLQKLVDEH 374
Query: 829 KCHTLSRKDGAKFFGEAMKLSGNIEV--GDLINRSLQEGDIVFINRPPSIHKHSIQAMRV 1002
C L+ K+G + G+I + G +++R + +GDIVFINRPP+ HKHS+QA+ V
Sbjct: 375 LC--LTYKEGVSTYSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALYV 432
Query: 1003 FLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQIFSSHSGEAN 1182
++H T+ INPLICGPLG DFDGDC+H F+P+SL +KAE+++L +V+ Q+ SSHSG N
Sbjct: 433 YIHEDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVVELFAVENQLLSSHSGNLN 492
Query: 1183 IVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLWTAVQVIQTV 1362
+ L+ D+LLA K++ + F+ +A QLAM+ L +P PA+L + + WT++Q++Q
Sbjct: 493 LQLSTDSLLALKMLVKRCFLGRAAANQLAMFLLLPLPRPALLKASSDDACWTSIQILQGA 552
Query: 1363 LPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALECLHSLECIL 1542
LP + G + LI+ I D + + T++EI S+ G AL+ L+ L
Sbjct: 553 LPMGFDCTGGRYLIRQSEILEFDFSRDALPATINEIAASIFFGKGPMEALKFFDVLQPFL 612
Query: 1543 VEWLSSSGFSVSIEDFVLPAS--ATLKNDLSEISKLIRYMGVGSYQTNILSQVERGVKDL 1716
+E L + GFSVS+E+F + + ++ + + S L+ Y Y + Q+E+ ++D+
Sbjct: 613 MESLFAEGFSVSLEEFSISRAIKRIIRRSIGKASSLL-YQLRSLYNELVAQQLEKHIQDV 671
Query: 1717 QNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQF-----FHGKNAIPSDWQKRL 1881
+ II S +ID S + ++VQQVGFLG Q F+ K +
Sbjct: 672 ELPIINFALKSTKLGDLIDSKSKSTIDKVVQQVGFLGQQLFDRGRFYSKGLVD---DVAS 728
Query: 1882 HTHLPC---GESSFLQEYEVESPEVHGFITSSFISGLNPCEAFIHSVHSREGLLSQKMGL 2052
H H C G+ EY G + F +GL+P E +HS+ +RE ++ GL
Sbjct: 729 HFHAKCCYDGDGYPSAEY--------GLLKGCFFNGLDPYEEMVHSISTREIMVRSSRGL 780
Query: 2053 KEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGHFVEKST 2232
EPG LFKNLMA LRDV +CYDGTVRN C N ++QF+YG G E
Sbjct: 781 SEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYG----------IQAGDKTEHLF 830
Query: 2233 P-GDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRKVVLYM 2409
P G+PVG+LAAT++++PAYKA DAS S S WE+++E L + N + DR+V+LY+
Sbjct: 831 PAGEPVGVLAATAMSNPAYKAVLDAS-PNSNSSWELMKEILLCKVNFRNEPVDRRVILYL 889
Query: 2410 KNC-CGAGIFTEKKFLGMEKHDVTCC-EKIAAGIQDALKKEILESFAVNIFVEYQERWF- 2580
+C CG +CC E A +++ L+K L++ AV +EYQ++
Sbjct: 890 NDCDCGG----------------SCCRENAAYSVKNQLRKVSLKNAAVEFIIEYQQQRTQ 933
Query: 2581 --DAELRAPLLGHIQLDAKRLMGASLSPATLEGFLYDNLR--KKSHPLNSFVDNLRLQAC 2748
++E A L+GHI LD L +S A + + L+ + +N ++ N+ L
Sbjct: 934 KENSETDAGLVGHIYLDEMMLEELKISMANVFEKCLERLKSFSRKKKVNQYLKNIELSFS 993
Query: 2749 DACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVDVLYPRLAETTVKG 2928
++C + A PCL F L K H + + ++ + + P L ET +KG
Sbjct: 994 ESCSSSHP------AAPCLTFWL--------KNHDSDLDNAVKVLSENICPVLFETIIKG 1039
Query: 2929 DDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALHSLLP 3108
D RI + I W + ++ TWV + + N Q GDAW L S LP
Sbjct: 1040 DPRISSASIIWVSPDTNTWVRNPYKSSN--GELALDIVLEEEAVKQSGDAWRIVLDSCLP 1097
Query: 3109 FMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCMTL 3288
+ L+D R IPY++ ++ +LLG++ + IQR+ +++++ KG + HL+L+AS MT
Sbjct: 1098 VLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKMVAKGVLREHLILLASSMTC 1157
Query: 3289 TGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCWGK 3468
G ++ +N G+K L + VPFT+ TL TP K FERAAE+ D LS VASC WGK
Sbjct: 1158 GGNLVGFNTGGYKALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGK 1217
Query: 3469 RAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIGEDM 3648
VGTGS F+I W E S +E +D Y L ++ + GE + + C+GED+
Sbjct: 1218 HVAVGTGSKFDIVWDSSEIKSNEIE----GMDVYSFLHMVKSVTNGE--EETDACLGEDI 1271
Query: 3649 DMDVCLQSLTNGSIFGNKAGTDS-FPRNKQSNFGRNKPAMD-------QDTSCWNQQQAT 3804
D + + + G + +G ++ F N + G D T+ W+ ++
Sbjct: 1272 DDLLEEEYMDLGMSPQHNSGFEAVFEENPEVLNGSTSNGWDVSSNQTQSKTNEWSGWASS 1331
Query: 3805 NGDGPDWNLPSSAADDVGWNKPASNGDGA---AWNQPTSVTEDVAWSKPASNGDGADW-- 3969
N DG S A + W K + D + AWN TS T D +K + + +DW
Sbjct: 1332 NKDG-----RSETAQENSWGKTVNQEDSSKSNAWN--TSTTADQTKTK---SNEWSDWGS 1381
Query: 3970 NQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVGWSKPAGNGDD---GGSWKKPTT 4140
N+ P ++ V SN + + + WS N + GS
Sbjct: 1382 NKSEIPAGGSKAVQEDSSKSNAWNTSTTSNQTKTKSKEWSAWGSNKSEIPACGSKAVQED 1441
Query: 4141 NGDDIGWNQTAAAPE 4185
+ WN + A +
Sbjct: 1442 SSKSNTWNTSTTADQ 1456
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 717 bits (1850), Expect = 0.0
Identities = 468/1401 (33%), Positives = 713/1401 (50%), Gaps = 29/1401 (2%)
Frame = +1
Query: 76 RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 255
+D P ++ E A FLELK+ S+S D +W FL + R+LLP E
Sbjct: 183 QDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNLS--RILLPSEV 240
Query: 256 SKILKKIPEKIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 432
+IL++IPE KK+ V DG IL +PVPPNC+ +PD G ++ SD V ML
Sbjct: 241 MEILRRIPEDTRKKL-VRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSML 299
Query: 433 KKIVSSVQD-KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSD 609
KK++ ++ K S G+ F HK LQS QYL+V G K S + + + S
Sbjct: 300 KKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLD--TRFGSSK 357
Query: 610 EFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTV 789
E ++S WL+KMR+LFI K G SSR V+TGD Y+ + EIG+P EIA+R+T EE V V
Sbjct: 358 EPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNV 417
Query: 790 FNKEKIRKMVEGGKCHTLSRKDGAKFFG--EAMKLSGNIEVGDLINRSLQEGDIVFINRP 963
N + ++ +V+ C L+ +DG + E K + G +++R + +GDIVFINRP
Sbjct: 418 HNMKHLQNLVDEKLC--LTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRP 475
Query: 964 PSIHKHSIQAMRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSV 1143
P+ HKHS+QA+ V++H T+ INPLICGPL DFDGDC+H F+P+SL +KAE+L+L SV
Sbjct: 476 PTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFSV 535
Query: 1144 DKQIFSSHSGEANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNG 1323
+KQ+ SSHSG N+ L D+LL+ K++ + F++KA QL M+ S+P PA+L
Sbjct: 536 EKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPCS 595
Query: 1324 SSLWTAVQVIQTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSE 1503
WTA+Q++QT LP + G + I I +D ++ +Q ++EI S+ E G
Sbjct: 596 GPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSIFSEKGPN 655
Query: 1504 RALECLHSLECILVEWLSSSGFSVSIEDFVLPASAT--LKNDLSEISKLIRYMGVGSYQT 1677
L+ SL+ +L+E L S GFSVS+EDF +P+ T ++ ++ +IS L+ Y Y
Sbjct: 656 EVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSLL-YNLRSMYNE 714
Query: 1678 NILSQVERGVKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQFFHGKNAI 1857
+ Q E ++ + + I +S++ +ID S + +++VQQ+GFLG Q
Sbjct: 715 LLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGFLGQQL------- 767
Query: 1858 PSDWQKRLHTHLPCGESS-FLQEYEVESPEV----HGFITSSFISGLNPCEAFIHSVHSR 2022
S+ K L G + F +Y + G I S F GL+P E +HS+ +R
Sbjct: 768 -SEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTR 826
Query: 2023 EGLLSQKMGLKEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXX 2202
E ++ GL EPG LFKNLMA LRDV +CYDGTVRN C N ++QF+YG
Sbjct: 827 EIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYG------VKART 880
Query: 2203 XXGHFVEKSTPGDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKH 2382
HF G+PVG+LAAT++++PAYKA D+S + S WE+++E L + N
Sbjct: 881 KPQHFFPA---GEPVGVLAATAMSNPAYKAVLDSSPSSN-SSWELMKEILLCQVNFKNDL 936
Query: 2383 RDRKVVLYMKNC-CGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFV 2559
DR+V+LY+ +C CG +K+ C E A +++ LKK L+ AV +
Sbjct: 937 IDRRVILYLNDCDCG------RKY---------CRENAAYLVKNQLKKASLKDTAVEFMI 981
Query: 2560 EYQERWFDAELRAP---LLGHIQLDAKRLMGASLSPATLEGFLYDNLR--KKSHPLNSFV 2724
EY ++ + P L+GHI L+ L ++S + + + +K + F
Sbjct: 982 EYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFF 1041
Query: 2725 DNLRLQACDACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVDVLYPR 2904
+ L + C + G PCL F + L+++ + P
Sbjct: 1042 KKIILSFRECCTFQHSCQSKGSDMPCLLF-------FWQGNRDDNLEQILHILAHKICPV 1094
Query: 2905 LAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWE 3084
L +T +KGD R+ V I W + ++ TW+ + +++ QRGDAW
Sbjct: 1095 LLQTIIKGDSRVCTVNIIWISPDTTTWI--RNPCKSRKGELALDIVLEKAAVKQRGDAWR 1152
Query: 3085 KALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLL 3264
L + LP + L+D R IPY++ +V +LLG++ A+ +QRL+ ++ ++ KG K HL+
Sbjct: 1153 IVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLI 1212
Query: 3265 LIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGS 3444
L+A+ MT G +I +N+ G+K L ++ VPFTE TL TP K FE+A+E+ D LS
Sbjct: 1213 LLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSI 1272
Query: 3445 VASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPS 3624
VASC WGK VGTGS F++ W D + I Q +D Y L ++ S G++ P
Sbjct: 1273 VASCSWGKHVTVGTGSRFDVLW-DTKEIGPA---QDGGIDIYSFLHLVRSGSYGKE--PD 1326
Query: 3625 SLCIGEDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDTSCWNQ-QQA 3801
+ C+G +++ D+ L+ P + SNF KP + N +
Sbjct: 1327 TACLGAEVE-DLILED--------ENLELGMSPEHS-SNF--EKPVFEDSAEFQNTWENH 1374
Query: 3802 TNGDGPDWNLPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVAWSKPASNGDGADWNQPN 3981
G G DW + + KP++ ++W +D ++
Sbjct: 1375 VPGSGGDWAVNQNKETTASTLKPSA---WSSWGTDKVTMKDTFSTR-------------- 1417
Query: 3982 QPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVGWSKPAGNGDD-----------GGSWK 4128
+P ++ GW G Q +A P +G D +W
Sbjct: 1418 EPDESSRSAGWD---DKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWG 1474
Query: 4129 KPTTNGDDIGWNQTAAAPEDD 4191
K D GWN+ P+ D
Sbjct: 1475 KKIDEADKTGWNKNDGKPQMD 1495
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 717 bits (1850), Expect = 0.0
Identities = 468/1401 (33%), Positives = 713/1401 (50%), Gaps = 29/1401 (2%)
Frame = +1
Query: 76 RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 255
+D P ++ E A FLELK+ S+S D +W FL + R+LLP E
Sbjct: 123 QDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNLS--RILLPSEV 180
Query: 256 SKILKKIPEKIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 432
+IL++IPE KK+ V DG IL +PVPPNC+ +PD G ++ SD V ML
Sbjct: 181 MEILRRIPEDTRKKL-VRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSML 239
Query: 433 KKIVSSVQD-KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSD 609
KK++ ++ K S G+ F HK LQS QYL+V G K S + + + S
Sbjct: 240 KKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLD--TRFGSSK 297
Query: 610 EFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTV 789
E ++S WL+KMR+LFI K G SSR V+TGD Y+ + EIG+P EIA+R+T EE V V
Sbjct: 298 EPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNV 357
Query: 790 FNKEKIRKMVEGGKCHTLSRKDGAKFFG--EAMKLSGNIEVGDLINRSLQEGDIVFINRP 963
N + ++ +V+ C L+ +DG + E K + G +++R + +GDIVFINRP
Sbjct: 358 HNMKHLQNLVDEKLC--LTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRP 415
Query: 964 PSIHKHSIQAMRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSV 1143
P+ HKHS+QA+ V++H T+ INPLICGPL DFDGDC+H F+P+SL +KAE+L+L SV
Sbjct: 416 PTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFSV 475
Query: 1144 DKQIFSSHSGEANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNG 1323
+KQ+ SSHSG N+ L D+LL+ K++ + F++KA QL M+ S+P PA+L
Sbjct: 476 EKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPCS 535
Query: 1324 SSLWTAVQVIQTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSE 1503
WTA+Q++QT LP + G + I I +D ++ +Q ++EI S+ E G
Sbjct: 536 GPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSIFSEKGPN 595
Query: 1504 RALECLHSLECILVEWLSSSGFSVSIEDFVLPASAT--LKNDLSEISKLIRYMGVGSYQT 1677
L+ SL+ +L+E L S GFSVS+EDF +P+ T ++ ++ +IS L+ Y Y
Sbjct: 596 EVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSLL-YNLRSMYNE 654
Query: 1678 NILSQVERGVKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQFFHGKNAI 1857
+ Q E ++ + + I +S++ +ID S + +++VQQ+GFLG Q
Sbjct: 655 LLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGFLGQQL------- 707
Query: 1858 PSDWQKRLHTHLPCGESS-FLQEYEVESPEV----HGFITSSFISGLNPCEAFIHSVHSR 2022
S+ K L G + F +Y + G I S F GL+P E +HS+ +R
Sbjct: 708 -SEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTR 766
Query: 2023 EGLLSQKMGLKEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXX 2202
E ++ GL EPG LFKNLMA LRDV +CYDGTVRN C N ++QF+YG
Sbjct: 767 EIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYG------VKART 820
Query: 2203 XXGHFVEKSTPGDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKH 2382
HF G+PVG+LAAT++++PAYKA D+S + S WE+++E L + N
Sbjct: 821 KPQHFFPA---GEPVGVLAATAMSNPAYKAVLDSSPSSN-SSWELMKEILLCQVNFKNDL 876
Query: 2383 RDRKVVLYMKNC-CGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFV 2559
DR+V+LY+ +C CG +K+ C E A +++ LKK L+ AV +
Sbjct: 877 IDRRVILYLNDCDCG------RKY---------CRENAAYLVKNQLKKASLKDTAVEFMI 921
Query: 2560 EYQERWFDAELRAP---LLGHIQLDAKRLMGASLSPATLEGFLYDNLR--KKSHPLNSFV 2724
EY ++ + P L+GHI L+ L ++S + + + +K + F
Sbjct: 922 EYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFF 981
Query: 2725 DNLRLQACDACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVDVLYPR 2904
+ L + C + G PCL F + L+++ + P
Sbjct: 982 KKIILSFRECCTFQHSCQSKGSDMPCLLF-------FWQGNRDDNLEQILHILAHKICPV 1034
Query: 2905 LAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWE 3084
L +T +KGD R+ V I W + ++ TW+ + +++ QRGDAW
Sbjct: 1035 LLQTIIKGDSRVCTVNIIWISPDTTTWI--RNPCKSRKGELALDIVLEKAAVKQRGDAWR 1092
Query: 3085 KALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLL 3264
L + LP + L+D R IPY++ +V +LLG++ A+ +QRL+ ++ ++ KG K HL+
Sbjct: 1093 IVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLI 1152
Query: 3265 LIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGS 3444
L+A+ MT G +I +N+ G+K L ++ VPFTE TL TP K FE+A+E+ D LS
Sbjct: 1153 LLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSI 1212
Query: 3445 VASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPS 3624
VASC WGK VGTGS F++ W D + I Q +D Y L ++ S G++ P
Sbjct: 1213 VASCSWGKHVTVGTGSRFDVLW-DTKEIGPA---QDGGIDIYSFLHLVRSGSYGKE--PD 1266
Query: 3625 SLCIGEDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDTSCWNQ-QQA 3801
+ C+G +++ D+ L+ P + SNF KP + N +
Sbjct: 1267 TACLGAEVE-DLILED--------ENLELGMSPEHS-SNF--EKPVFEDSAEFQNTWENH 1314
Query: 3802 TNGDGPDWNLPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVAWSKPASNGDGADWNQPN 3981
G G DW + + KP++ ++W +D ++
Sbjct: 1315 VPGSGGDWAVNQNKETTASTLKPSA---WSSWGTDKVTMKDTFSTR-------------- 1357
Query: 3982 QPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVGWSKPAGNGDD-----------GGSWK 4128
+P ++ GW G Q +A P +G D +W
Sbjct: 1358 EPDESSRSAGWD---DKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWG 1414
Query: 4129 KPTTNGDDIGWNQTAAAPEDD 4191
K D GWN+ P+ D
Sbjct: 1415 KKIDEADKTGWNKNDGKPQMD 1435
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 715 bits (1846), Expect = 0.0
Identities = 478/1466 (32%), Positives = 744/1466 (50%), Gaps = 101/1466 (6%)
Frame = +1
Query: 97 IQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKI 276
I+ + K + AS+L+LKV S++ L + +W FL + R LL ++LKKI
Sbjct: 160 IREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNFT--RTLLSVMVKEMLKKI 217
Query: 277 PEKIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSV 453
P + KK+ DG IL +PVPPNC+ +P+ G TV SD V MLKKI+ V
Sbjct: 218 PNETRKKLAGRGY-YPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQV 276
Query: 454 QD-KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNP--GSNAQGSDEFSKS 624
+ K S G F H+ +LQ QYL+V G K S + G N + +D +K+
Sbjct: 277 EIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKA 336
Query: 625 FANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEK 804
WL+KMR+LFI K G SSR V+TGD Y+ + EIG+P E+A+R+T EE V+V N
Sbjct: 337 ----WLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 392
Query: 805 IRKMVEGGKCHTLSRKDGAKFFGEAMKLSGN--IEVGDLINRSLQEGDIVFINRPPSIHK 978
++++V+ C L+ +DG+ + G+ ++ G +++R + +GDIVFINRPP+ HK
Sbjct: 393 LQELVDKKLC--LTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHK 450
Query: 979 HSIQAMRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQIF 1158
HS+QA+RV+LH + INPLICGPL DFDGDC+H F+P+S+ +KAE+L L SV+KQ+
Sbjct: 451 HSLQALRVYLHDDHVVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLL 510
Query: 1159 SSHSGEANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLWT 1338
SSHSG N+ L D+LL+ K++ + F+ KA QLAM+ +P PA+L +GS WT
Sbjct: 511 SSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWT 570
Query: 1339 AVQVIQTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALEC 1518
A+Q++QTVLP + + G+ LIK+ D D+ + ++EI S+ + G E L+
Sbjct: 571 ALQILQTVLPASFDCHGDSYLIKNSNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKF 630
Query: 1519 LHSLECILVEWLSSSGFSVSIEDFVLPAS--ATLKNDLSEISKLIRYMGVGSYQTNILSQ 1692
SL+ +L+E + S GFSV ++D+ +P + L+ ++ +S L+ Y ++ + Q
Sbjct: 631 FDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLL-YQLRSTFNELVELQ 689
Query: 1693 VERGVKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQF-----FHGKNAI 1857
+E ++ ++ I +S K+ D S + +++VQQ+GFLG+Q F+ K+ I
Sbjct: 690 LENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLI 749
Query: 1858 PSDWQKRLHTHLPCGESSFLQEYEVESPEVH-GFITSSFISGLNPCEAFIHSVHSREGLL 2034
D H +++ P G + F GL+P E +HS+ +RE ++
Sbjct: 750 -EDVASLFHNR--------YSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMV 800
Query: 2035 SQKMGLKEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGH 2214
GL EPG LFKNLMA LRDV +CYDGTVRN C N ++Q +YG G
Sbjct: 801 RSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYG----------MKAGM 850
Query: 2215 FVEKS--TPGDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRD 2388
S PG+PVG+LAAT++++PAYKA D ST S S W++++E L + + + D
Sbjct: 851 MQPYSLFPPGEPVGVLAATAMSTPAYKAVLD-STPSSNSSWDMMKEILLCKVSFKNEPID 909
Query: 2389 RKVVLYMKNC-CGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEY 2565
R+V+LY+ NC CG +K+ C E A ++ LKK L+ A++ +EY
Sbjct: 910 RRVILYLNNCACG------RKY---------CNENAAYVVKSHLKKVTLKDAAMDFMIEY 954
Query: 2566 QERWFDAELRAPLLGHIQLDAKRLMGASLSPATLEGFLYDNLRKKSHPLNSF-------V 2724
+ + L L+GH+ L+ R++ L+ E LR+ ++SF
Sbjct: 955 NRQPTPSGLGPGLVGHVHLNRVRMLLKELNIDMTE-----VLRRCQETMSSFKKKKKKIA 1009
Query: 2725 DNLRLQACDACDIAQRSGNDGFAKPCLHF-ALTKESYLASKGHSHSFYSDLYLMVDVLYP 2901
LR + C Q +G + PCL F T++ +L H ++ D+++P
Sbjct: 1010 HALRFSISEHCAFHQWNGEESIDMPCLIFWHQTRDVHLERTAH---------ILADIVFP 1060
Query: 2902 RLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAW 3081
L+ET +KGD RI++ + W + +S +W K +R + Q GDAW
Sbjct: 1061 LLSETIIKGDPRIKSASVIWISPDSTSW--QKNPSRWQDGELALDVCLEKSAVKQNGDAW 1118
Query: 3082 EKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHL 3261
L LP + L+D R +PY++ +V +LLG++ A+ +IQRL+ ++ ++ KG +HL
Sbjct: 1119 RNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHL 1178
Query: 3262 LLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTL--------------------- 3378
+L+A+ MT TG +I +N+ G+K L ++ VPFTE TL
Sbjct: 1179 ILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFVSPFHSLVLSLYMKFNFFFL 1238
Query: 3379 -------KTPIKSFERAAEEGVVDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKP 3537
TP K FE+AAE+ D LS VASC WGK VGTGS F+I W
Sbjct: 1239 FFLNGXYTTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQ------- 1291
Query: 3538 LEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIGEDMDMDVCLQ-------------SLT 3678
E C + D + L + G+ +P+S C+GE+++ D+ ++ S +
Sbjct: 1292 KELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEIE-DIMVEDEYGELTLSPEPFSTS 1350
Query: 3679 NGSIFGNKAG----TDSFPRNKQSNFGRNKPAMDQDTSCWNQQQ---ATN-GDGPDWN-L 3831
+F + A D++P + + A+ W + ATN DG DW+
Sbjct: 1351 EKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWESNENGKATNSSDGNDWSGW 1410
Query: 3832 PSSAADDVGWNKPASNGDGAAW-------NQPTSVTEDVAWSK----------------- 3939
A DV N +AW N+ T+ + D WS
Sbjct: 1411 GRKAEPDVTVTNAQENTSNSAWDTTSSWGNKATNSSNDNDWSNCSTKEVERDSFTSMEKT 1470
Query: 3940 PASNGDGADWNQPNQPTSATEDVGWGKPVSNGDGADWS--QQTSAAEDVGWSKPAGNGDD 4113
P S G W+ + + T+D + + + + WS Q+ A + K A
Sbjct: 1471 PKSGG----WDSASTWGTKTKDDSFKRETAPKKSSQWSGLQKDKAETQDAFHKKAEMASK 1526
Query: 4114 GGSWKKPTTNGDDIGWNQTAAAPEDD 4191
G W +D W++ + ED+
Sbjct: 1527 SGGW-------EDKAWSRGTSKTEDN 1545
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 708 bits (1827), Expect = 0.0
Identities = 472/1382 (34%), Positives = 705/1382 (51%), Gaps = 44/1382 (3%)
Frame = +1
Query: 118 ENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMKK 297
+ A +LELK+ SK L +W FL + R LL E ++LK+IPE+ KK
Sbjct: 140 DGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSLT--RTLLASEVKEMLKRIPEETRKK 197
Query: 298 ICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQST 471
+ DG IL+ +PVPPNC+ +PD G + SD + MLKK++ V+ + S
Sbjct: 198 LAGKGY-FPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSIAMLKKVLKQVEIIRSSR 256
Query: 472 MGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFSKSFANFWLDKM 651
G F + + +LQ QYL+V G K S + G + S WL+KM
Sbjct: 257 SGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARF---GVSQDPNSTTKAWLEKM 313
Query: 652 RSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEGGK 831
R+LFI K G SSR V+TGD Y+ + EIG+P EIA+R+T EE V V N ++++V+
Sbjct: 314 RTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVNVHNINYLQELVDNKL 373
Query: 832 CHTLSRKDGAKFFGEAMKLSGNIEVGDLINRSLQEGDIVFINRPPSIHKHSIQAMRVFLH 1011
C T S + E K + G +++R + +GD VFINRPP+ HKHS+QA+ V++H
Sbjct: 374 CLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPPTTHKHSLQALSVYVH 433
Query: 1012 PGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQIFSSHSGEANIVL 1191
T+ INPLICGPL DFDGDC+H F+P+SL +KAE+L+L SV+KQ+ SSH+G N+ L
Sbjct: 434 DDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHNGNLNLQL 493
Query: 1192 TVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLWTAVQVIQTVLPD 1371
D LL+ K++ + F+DKA QLAM+AL +P PA LS S+ WTA+Q++Q+VLP
Sbjct: 494 ATDALLSLKVMFKKYFLDKAFTQQLAMFALSPLPRPA-LSKARCSARWTALQILQSVLPP 552
Query: 1372 NMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALECLHSLECILVEW 1551
+ G++ LIK + D D+ I ++EI S+ E G E LE SL+ +L+E
Sbjct: 553 GFDSCGDRYLIKKSEVLKGDFDRDTIPSVINEIVTSIFFEKGPEEVLEFFDSLQPLLMEN 612
Query: 1552 LSSSGFSVSIEDFVLPASATLKNDLSEISKL--IRYMGVGSYQTNILSQVERGVKDLQNK 1725
L + GFSVS+EDF L + A L N EI L + Y + + + Q+E ++ ++
Sbjct: 613 LFADGFSVSLEDFSL-SKAALWNIQKEIQALYSLLYHRMSTQNELVDLQIENHIRHVKML 671
Query: 1726 IIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQFFHGKNAIPSDWQKRLHTHLPCGE 1905
+ + I S++ +ID S + S++VQQ GFLG+Q + + +H E
Sbjct: 672 VAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSKTLVEDIASHF---E 728
Query: 1906 SSFLQEYEVESPEVHGFITSSFISGLNPCEAFIHSVHSREGLLSQKMGLKEPGVLFKNLM 2085
+ + + + +G I F GL+P E HS+ +RE ++ GL EPG LFKNLM
Sbjct: 729 RIYPMDLNYPTAK-YGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSEPGTLFKNLM 787
Query: 2086 AFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGHFVEKSTPGDPVGILAAT 2265
A LRDV +CYDGTVRN C N ++QF Y H + + G+PVG+LAAT
Sbjct: 788 AVLRDVVICYDGTVRNVCSNSIIQFDYA--------VNARKSHSLFPA--GEPVGVLAAT 837
Query: 2266 SIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRKVVLYMKNCCGAGIFTEK 2445
++++PAYKA D+S + S WE+++E L R + DR+V+LY+ N CG G +
Sbjct: 838 AMSNPAYKAVLDSSPSSNNS-WELMKEILLCRVSFNNDPIDRRVILYL-NDCGCG----R 891
Query: 2446 KFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEYQERWFDAELRAPLLGHIQLD 2625
K+ C E+ A +++ LK+ L+ AV +EY++ ++ L+GHI L+
Sbjct: 892 KY---------CQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPEIISDDEG-LVGHIHLN 941
Query: 2626 AKRLMGASLS-----PATLEGFLYDNLRKKSHPLNSFVDNLRLQACDACDIAQRSGNDGF 2790
L +S P E +KK + F N L + C Q +
Sbjct: 942 KILLEDLRISMHDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSVSECCSFQQSCADKRS 1001
Query: 2791 AKPCLHFALTKESYLASKGHSHSFYSDLY-LMVDVLYPRLAETTVKGDDRIEAVRISWNN 2967
PCL F L +G S S+ L ++ +++YP L ET +KGD RI + I W +
Sbjct: 1002 NMPCLMFVL--------RGASDSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWIS 1053
Query: 2968 QESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALHSLLPFMELLDDSRCIPY 3147
++ W+ + ++N+ Q GDAW L S LP L+D R +PY
Sbjct: 1054 PDTTAWI--RNPSKNRKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPY 1111
Query: 3148 SVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCMTLTGKVIAYNAAGFK 3327
++ +V +LLGV+ A++ +QRL+ ++ ++ KG K HL+L+A+ MT G ++ +N+ G+K
Sbjct: 1112 AIKQVQELLGVSCAFEQAVQRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYK 1171
Query: 3328 DLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCWGKRAPVGTGSNFEIF 3507
L S+ VPFTE TL TP K FE+AAE+ D LS VA+C WGK VGTGS F++
Sbjct: 1172 ALSRSLNVQVPFTEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDLL 1231
Query: 3508 WKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSL-CIGEDMD-----MDVCLQ 3669
W + E+ N+ D + + L + ++ S C+GE++D D L
Sbjct: 1232 W-------QTENEEFNQDDGVDVYDFLHMVRSSTGIEESDTGCLGEEVDGLEDEFDWSLS 1284
Query: 3670 S----LTNGSIFGNKAGTDSFPRNKQSNFGRNKPA----------------MDQDTSCWN 3789
++ +F + S+ NKQ N + A +++ +S W
Sbjct: 1285 PEHNLCSDKPVFEDLVEDQSWLENKQENANWDSEADCRKSSEDKWEKLGTSLEKPSSGWR 1344
Query: 3790 QQQATNGDGPD--WNLPSSAADDVGWNKPASNGDGAA--WNQPTS--VTEDVAWSKPASN 3951
+ A D S + GW AS G+ + W S W AS
Sbjct: 1345 TEGAWGKSSDDKLEKAGSPSRKPSGWGTEASWGESSCDKWENVGSPAAKSFSEWGTEASW 1404
Query: 3952 GDGADWNQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVGW--SKPAGNGDDGGSW 4125
G N +A GWG S G + Q E+VG SKP SW
Sbjct: 1405 GKSFGDKPENVSPAAKTSSGWGSEASWGKSSGDRQ-----ENVGGSASKPLSGWGAKASW 1459
Query: 4126 KK 4131
K
Sbjct: 1460 GK 1461
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 707 bits (1825), Expect = 0.0
Identities = 463/1363 (33%), Positives = 703/1363 (51%), Gaps = 29/1363 (2%)
Frame = +1
Query: 118 ENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMKK 297
+ A +LELK+ SK L +W FL + R LL E ++LK+IPE+ KK
Sbjct: 140 DGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSLT--RTLLASEVKEMLKRIPEETRKK 197
Query: 298 ICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQST 471
+ DG IL+ +PVPPNC+ +PD G + SD + MLKK++ V+ + S
Sbjct: 198 LAGKGY-FPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSIAMLKKVLKQVEIIRSSR 256
Query: 472 MGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFSKSFANFWLDKM 651
G F + + +LQ QYL+V G K S + G + S WL+KM
Sbjct: 257 SGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARF---GVSQDPNSTTKAWLEKM 313
Query: 652 RSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEGGK 831
R+LFI K G SSR V+TGD Y+ + EIG+P EIA+R+T EE V V N ++++V+
Sbjct: 314 RTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVNVHNINYLQELVDNKL 373
Query: 832 CHTLSRKDGAKFFGEAMKLSGNIEVGDLINRSLQEGDIVFINRPPSIHKHSIQAMRVFLH 1011
C T S + E K + G +++R + +GD VFINRPP+ HKHS+QA+ V++H
Sbjct: 374 CLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPPTTHKHSLQALSVYVH 433
Query: 1012 PGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQIFSSHSGEANIVL 1191
T+ INPLICGPL DFDGDC+H F+P+SL +KAE+L+L SV+KQ+ SSH+G N+ L
Sbjct: 434 DDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHNGNLNLQL 493
Query: 1192 TVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLWTAVQVIQTVLPD 1371
D LL+ K++ + F+DKA QLAM+AL +P PA+ H WTA+Q++Q+VLP
Sbjct: 494 ATDALLSLKVMFKKYFLDKAFAQQLAMFALSPLPRPALSKAHCSGPRWTALQILQSVLPP 553
Query: 1372 NMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALECLHSLECILVEW 1551
+ G++ LIK + D D+ I ++EI S+ E G E LE SL+ +L+E
Sbjct: 554 GFDSCGDRYLIKKSEVLNGDFDRDTIPSVINEIVTSIFFEKGPEEVLEFFDSLQPLLMEN 613
Query: 1552 LSSSGFSVSIEDFVLPASATLKNDLSEISKL--IRYMGVGSYQTNILSQVERGVKDLQNK 1725
L + GFSVS+EDF L + A L N EI L + Y + + + Q+E ++ ++
Sbjct: 614 LFADGFSVSLEDFSL-SKAALWNIQKEIQALYSLLYHRMSTQNELVDLQIENHIRHVKML 672
Query: 1726 IIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQFFHGKNAIPSDWQKRLHTHLPCGE 1905
+ + I S++ +ID S + S++VQQ GFLG+Q + + +H E
Sbjct: 673 VAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSKTLVEDIASHF---E 729
Query: 1906 SSFLQEYEVESPEVHGFITSSFISGLNPCEAFIHSVHSREGLLSQKMGLKEPGVLFKNLM 2085
+ + + + +G I F GL+P E HS+ +RE ++ GL EPG LFKNLM
Sbjct: 730 RIYPMDLNYPTAK-YGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSEPGTLFKNLM 788
Query: 2086 AFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGHFVEKSTPGDPVGILAAT 2265
A LRDV +CYDGTVRN C N ++QF Y H + + G+PVG+LAAT
Sbjct: 789 AVLRDVVICYDGTVRNVCSNSIIQFDYA--------VNARKSHSLFPA--GEPVGVLAAT 838
Query: 2266 SIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRKVVLYMKNCCGAGIFTEK 2445
++++PAYKA D+S + S WE+++E L R + DR+V+LY+ N CG G +
Sbjct: 839 AMSNPAYKAVLDSSPSSNNS-WELMKEILLCRVSFNNDPIDRRVILYL-NDCGCG----R 892
Query: 2446 KFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEYQERWFDAELRAPLLGHIQLD 2625
K+ C E+ A +++ LK+ L+ AV +EY++ ++ L+GHI L+
Sbjct: 893 KY---------CQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPEIISDDEG-LVGHIHLN 942
Query: 2626 AKRLMGASLS-----PATLEGFLYDNLRKKSHPLNSFVDNLRLQACDACDIAQRSGNDGF 2790
L +S P E +KK + F N L + C Q +
Sbjct: 943 KILLEDLRISMHDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSISECCSFQQSCADKRS 1002
Query: 2791 AKPCLHFALTKESYLASKGHSHSFYSDLY-LMVDVLYPRLAETTVKGDDRIEAVRISWNN 2967
PCL F L +G S S+ L ++ +++YP L ET +KGD RI + I W +
Sbjct: 1003 NMPCLMFVL--------RGASDSYLDKLSGVLANMIYPVLLETIIKGDPRICSANIIWIS 1054
Query: 2968 QESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALHSLLPFMELLDDSRCIPY 3147
++ W+ + ++N+ Q GDAW L S LP L+D R +PY
Sbjct: 1055 PDTTAWI--RNPSKNRKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPY 1112
Query: 3148 SVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCMTLTGKVIAYNAAGFK 3327
++ +V +LLGV+ A++ +QRL+ ++ ++ KG K HL+L+A+ MT G ++ +N+ G+K
Sbjct: 1113 AIKQVQELLGVSCAFEQAVQRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYK 1172
Query: 3328 DLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCWGKRAPVGTGSNFEIF 3507
L S+ VPFTE TL P K FE+AAE+ D LS VA+C WGK VGTGS F++
Sbjct: 1173 ALSRSLNVQVPFTEATLFMPRKCFEKAAEKRHTDNLSSVVAACSWGKHVAVGTGSRFDLL 1232
Query: 3508 WKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIGEDMD-----MDVCLQS 3672
W+ Q + +D Y+ L ++ + E++ C+GE++D D L
Sbjct: 1233 WQ----TENEEFNQDDGVDVYDFLHMVRSSTGIEELDTG--CLGEEVDGLEDEFDWSLSP 1286
Query: 3673 ----LTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDTSC-WNQQQATNGDGPDWNLPS 3837
++ IF + S+ NKQ N D + C + + G PS
Sbjct: 1287 EHNLCSDKPIFEDLVEDQSWLENKQEN-----ENWDSEADCRKSSEDKWEKLGTSLEKPS 1341
Query: 3838 SAADDVG-WNKPASN---GDGAAWNQPTSVTEDVAWSKPASNGDGADWNQPNQPTSAT-- 3999
S G W K + + G+ +P+ + +W + +S+ W P + +
Sbjct: 1342 SGWRTEGAWGKSSDDKLEKAGSPSRKPSGWGTEASWGESSSD----KWENVGSPAAKSFS 1397
Query: 4000 ---EDVGWGKPVSNGDGADWSQQTSAAEDVGWSKPAGNGDDGG 4119
+ WGK S GD + + +A GW A G G
Sbjct: 1398 EWGTEASWGK--SFGDKPENVRSPAAKTSSGWGSEASWGKSPG 1438
>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 705 bits (1819), Expect = 0.0
Identities = 467/1396 (33%), Positives = 713/1396 (51%), Gaps = 44/1396 (3%)
Frame = +1
Query: 133 LELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMKKICVNP 312
L+LK SKS +W FL + R LLP E ++LK+IP++ KK+
Sbjct: 145 LQLKRPSKSRTPPGFWNFLERYGFRYGDGHI--RTLLPCEVMEMLKRIPQETRKKLAAKG 202
Query: 313 LAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQSTMGKNK 486
DG IL IPVPPNC+ +P+ G +V +D + MLKK++ V+ + S G
Sbjct: 203 Y-FPQDGYILSQIPVPPNCLSVPEISDGVSVMSADPSISMLKKVLKQVEIIRSSRSGIPN 261
Query: 487 FSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFSKSFANFWLDKMRSLFI 666
F ELQ++ QYL+V G K S + + E + S WL+KMR+LFI
Sbjct: 262 FESQIVEANELQAIIDQYLQVRGTGKPSRDIDARFGV--NKELNASSTKAWLEKMRTLFI 319
Query: 667 SKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEGGKCHTLS 846
K G SSR V+TGD +R + E+GIP EIA+R+T EE V N ++++V+ C L+
Sbjct: 320 RKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITFEEKVNDHNIRYLQELVDSKLC--LT 377
Query: 847 RKDGAKFFG--EAMKLSGNIEVGDLINRSLQEGDIVFINRPPSIHKHSIQAMRVFLHPGK 1020
KDG+ + E K + G +++R + +GD+VF+NRPP+ HKHS+QA++V++H
Sbjct: 378 YKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNRPPTTHKHSLQALQVYVHDDH 437
Query: 1021 TMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQIFSSHSGEANIVLTVD 1200
+ INPLICGPL DFDGDC+H F+P+SL +KAE+L+L SV+KQ+ SSHSG+ N+ L D
Sbjct: 438 VVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHSGKPNLQLAAD 497
Query: 1201 TLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLWTAVQVIQTVLPDNMN 1380
LL+ K++ + F+DKA QLAM+A S+P PA+L ++ S WTA Q++QT LP + +
Sbjct: 498 ALLSLKMMFKKYFLDKAAAQQLAMFASSSLPRPALLKANSAHSYWTAFQILQTALPAHFD 557
Query: 1381 LKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALECLHSLECILVEWLSS 1560
G+ L+ I +D + +++I S+ E G E L+ SL+ +L+E L S
Sbjct: 558 CSGDNYLVNKSEILNIDFSTSSVAAVMNDIATSVFFEKGGEDVLKFFDSLQPLLMENLFS 617
Query: 1561 SGFSVSIEDFVLPASA--TLKNDLSEISKLIRYMGVGSYQTNILSQVERGVKDLQNKIIR 1734
GFSV +EDF + ++ ++ ++ + S L+ ++ +Y + Q++ ++ ++ +
Sbjct: 618 EGFSVGLEDFYMSRTSIQDIQKNIQDSSDLLYHLR-STYNEFVEFQLQNRIRSVKVPVSH 676
Query: 1735 EIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQF-----FHGKNAIPSDWQKRLHTHLPC 1899
I S++ +ID S + ++IVQQ+GFLG+Q F+ K + D H+ P
Sbjct: 677 FILESSALGDLIDSKSDSAINKIVQQIGFLGLQLSDKGRFYSKTLV-EDVASLCHSKYP- 734
Query: 1900 GESSFLQEYEVESPEVHGFITSSFISGLNPCEAFIHSVHSREGLLSQKMGLKEPGVLFKN 2079
+ + S E +G + S F GL+P EA +HS+ +RE ++ GL EPG LFKN
Sbjct: 735 ------SDIDYPSAE-YGLVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLSEPGTLFKN 787
Query: 2080 LMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGHFVEKSTP-GDPVGIL 2256
LMA LRDV +CYDGTVRN C N ++QF+YG G + P G+PVG+L
Sbjct: 788 LMAILRDVVICYDGTVRNVCSNSIIQFEYG----------VNIGSRPQHLFPAGEPVGVL 837
Query: 2257 AATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRKVVLYMKNC-CGAGI 2433
AAT++++PAYKA D ST S S WE+++E L + N + DR+V+LY+ NC CG
Sbjct: 838 AATAMSNPAYKAVLD-STPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCG--- 893
Query: 2434 FTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEYQERWFDAEL---RAPL 2604
+K+ C E+ A +++ LKK L+ AV +EY + A L
Sbjct: 894 ---RKY---------CRERAACLVKNQLKKVSLKDTAVEFMIEYNNQLSGLGSLINDAGL 941
Query: 2605 LGHIQLDAKRLMGASLS--------PATLEGFLYDNLRKKSHPLNSFVDNLRLQACDACD 2760
+GHI L+ L ++ T+ F + KK + N L A + C
Sbjct: 942 VGHIHLNEDMLRELNIGVHDILQKCQETINSFRRKKVGKKKFNIGYHFKNTVLFASEHCS 1001
Query: 2761 IAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVDVLYPRLAETTVKGDDRI 2940
PCL F L L + + L D++ P L ET +KGD RI
Sbjct: 1002 FHHSCAEKRSDSPCLMFFLQATDDLETT-------TTLQYYADLICPVLLETIIKGDPRI 1054
Query: 2941 EAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALHSLLPFMEL 3120
+ I W + ++ TW+ S +++ Q GDAW L S LP + L
Sbjct: 1055 GSANIIWIDPDTTTWIRSP--NKSQKGEWALDIVLEKSVIKQSGDAWRTVLDSCLPVLHL 1112
Query: 3121 LDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCMTLTGKV 3300
+D R IPY++ ++ +LLGV+ A+ +QRL+ A+ ++ KG K HL+L+A+ MT G
Sbjct: 1113 IDTRRSIPYAIKQIQELLGVSCAFDQAVQRLSTAVTMVAKGVLKEHLILLANSMTCAGNF 1172
Query: 3301 IAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCWGKRAPV 3480
+ +N++G+K L ++ VPFTE TL TP K FERAAE+ +D L+ VASC WGK V
Sbjct: 1173 VGFNSSGYKALSRALNIQVPFTEATLFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAV 1232
Query: 3481 GTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIGEDMDMDV 3660
GTG F++ W D + E LD + L ++ S + ++ +G ++D +
Sbjct: 1233 GTGVRFDVLW-DTREVELTQE---GGLDVFNFLHMV---STANVEEATTGALGAEVDDLM 1285
Query: 3661 CLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDTSCWNQQQATNGD---GPDW-- 3825
+ + + S + P + +K + S W + + + D G DW
Sbjct: 1286 LVDEMADSSFSPELNSSFDRPVFEDLVEFDDKLGDLPEKSNWEKDSSFHTDSNGGKDWSV 1345
Query: 3826 --NLPSSAADDV----GWNKPASNGDGAAWNQPTSVTEDV-----AWSK-PASNGDGADW 3969
N+ + A DV G K + +A Q S V AW K PA + W
Sbjct: 1346 DKNVGTVAVPDVWSSWGTEKGKTQDSNSAEAQLDSKKSSVLDTSSAWGKNPAKENTTSTW 1405
Query: 3970 NQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDV--GWSKPAGNGDDGGSW-KKPTT 4140
T+A+E+ G+ V D A S + S + W+ D +W P
Sbjct: 1406 G----TTTASENDWCGRGVGEDDSATLSGKKSGVLNTSSAWATNTAREDAASAWGTNPAK 1461
Query: 4141 NGDDIGWNQTAAAPED 4188
W T A D
Sbjct: 1462 ENSTSTWGTTRANEND 1477
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 702 bits (1811), Expect = 0.0
Identities = 460/1373 (33%), Positives = 710/1373 (51%), Gaps = 31/1373 (2%)
Frame = +1
Query: 115 NENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMK 294
++ A +L LKV SKS + + +W+FL ++ R LLP EA +I+K+IP + K
Sbjct: 141 SDGACYLALKV-SKSKMQNGFWSFLEKYGYRYGGDHT--RALLPCEAMEIIKRIPIETKK 197
Query: 295 KICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQS 468
K+ DG +L +PVPPNC+ +P+ G +V SD + +L+K++ V+ K S
Sbjct: 198 KLAGKGY-FPQDGYVLKYLPVPPNCLSVPEVSDGVSVMSSDPSITILRKLLRKVEIIKSS 256
Query: 469 TMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFSKSFANFWLDK 648
G+ F H +LQS+ QY ++ G K + + E + S WL+K
Sbjct: 257 RSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGV--NKELTASSTKAWLEK 314
Query: 649 MRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEGG 828
MR+LFI K G SSR V+TGD Y+ I E+GIP+E+A+R+T EE V + N ++K+V+
Sbjct: 315 MRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYLQKLVDEH 374
Query: 829 KCHTLSRKDGAKFFGEAMKLSGNIEVGDLINRSLQEGDIVFINRPPSIHKHSIQAMRVFL 1008
C T E K ++ G +++R + +GDIVFINRPP+ HKHS+QA+ V++
Sbjct: 375 LCLTYKEGGSTYSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALYVYI 434
Query: 1009 HPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQIFSSHSGEANIV 1188
H T+ INPLICGPLG DFDGDC+H F+P+SL +KAE+++L SV+ Q+ SSHSG N+
Sbjct: 435 HEDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVVELFSVENQLLSSHSGNLNLQ 494
Query: 1189 LTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLWTAVQVIQTVLP 1368
L+ D+LL+ K++ + F D+A QLAM+ L +P PA+L +G + WT++Q++Q LP
Sbjct: 495 LSTDSLLSLKMLVKRCFFDRAAANQLAMFILLPLPRPALLKASSGDACWTSIQILQCALP 554
Query: 1369 DNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALECLHSLECILVE 1548
+ G + LI+ I + + + T++EI S+ G + AL L+ L+E
Sbjct: 555 LGFDCTGGRYLIRQSEILEFEFSRDVLPATVNEIAASVFFGKGPKEALNFFDVLQPFLME 614
Query: 1549 WLSSSGFSVSIEDFVLPAS--ATLKNDLSEISKLIRYMGVGSYQTNILSQVERGVKDLQN 1722
L + GFSVS+E+F + + ++ + ++S L+ Y Y + Q+E+ ++D++
Sbjct: 615 SLFAEGFSVSLEEFSISRAIKRIIRKSIGKVSSLL-YQLRSLYNELVAQQLEKHIRDVEL 673
Query: 1723 KIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQF-----FHGKNAIPSDWQKRLHT 1887
II S +ID S + ++VQQ+GFLG Q F+ K + H
Sbjct: 674 PIINFALKSTKLGDLIDSKSKSAIDKVVQQIGFLGQQLFDRGRFYSKGLVD---DVASHF 730
Query: 1888 HLPC---GESSFLQEYEVESPEVHGFITSSFISGLNPCEAFIHSVHSREGLLSQKMGLKE 2058
H C G+ EY G + F +GL+P E +HS+ +RE ++ GL E
Sbjct: 731 HAKCCYDGDGYPSAEY--------GLLKGCFFNGLDPYEEMVHSISTREIMVRSSRGLSE 782
Query: 2059 PGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGHFVEKSTP- 2235
PG LFKNLMA LRDV +CYDGTVRN C N ++QF+YG G E P
Sbjct: 783 PGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYG----------IQAGDKSEHLFPA 832
Query: 2236 GDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRKVVLYMKN 2415
G+PVG+LAAT++++PAYKA DAS S S WE+++E L + N + DR+V+LY+ +
Sbjct: 833 GEPVGVLAATAMSNPAYKAVLDAS-PSSNSSWELMKEILLCKVNFRNELVDRRVILYLND 891
Query: 2416 C-CGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEYQERWF---D 2583
C CG C E A ++D L+K L+ AV +EYQ++ +
Sbjct: 892 CDCGGSY---------------CRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKEN 936
Query: 2584 AELRAPLLGHIQLDAKRLMGASLSPATLEGFLYDNLRKKSH--PLNSFVDNLRLQACDAC 2757
+E L+GHI LD L +S A + ++ L+ S +N + N+ L ++C
Sbjct: 937 SETDVGLVGHIYLDEMMLEELKISMAYVFDKCHERLKSFSQKKKVNQSLKNIELSFSESC 996
Query: 2758 DIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVDVLYPRLAETTVKGDDR 2937
+ A PCL F L K + + + ++ + + P L +T ++GD R
Sbjct: 997 SSSHP------AAPCLTFWL--------KNYDSDLDNAVKVLAEKICPVLFKTIIQGDPR 1042
Query: 2938 IEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALHSLLPFME 3117
I + I W + ++ TWV + + N Q GDAW L + LP +
Sbjct: 1043 ISSASIIWVSPDTNTWVRNPYKSSN--GELALDIILEKEAVKQSGDAWRVVLDACLPVLH 1100
Query: 3118 LLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCMTLTGK 3297
L+D R IPY++ ++ +LLG++ + IQR+ +++++ KG + HL+L+AS MT G
Sbjct: 1101 LIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKMVAKGVLREHLILLASSMTCGGN 1160
Query: 3298 VIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCWGKRAP 3477
++ +N G+K L + VPFT+ TL TP K FERAAE+ D LS VASC WGK
Sbjct: 1161 LVGFNIGGYKALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVA 1220
Query: 3478 VGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIGEDMDMD 3657
VGTGS F++ W E S +E +D Y L ++ + GE + + C+GED+D
Sbjct: 1221 VGTGSKFDVVWDANEIKSNEIE----GMDVYSFLHMVKSFTNGE--EETDACLGEDIDDL 1274
Query: 3658 VCLQSLTNGSIFGNKAGTDS-FPRNKQSNFGRNKPAMDQDTSCWNQQQATNGDGPDWNLP 3834
+ + + G + +G ++ F N + G D + NQ ++ + W
Sbjct: 1275 LEEEYMDLGMSPQHNSGFEAVFEENPEVLNGSTSNGWDVSS---NQGESKTNEWSGWASS 1331
Query: 3835 SSAADDVGWNKPA-SNGDGAAWNQPTSVTEDVAWSKPASNGDGADWNQPNQPTSATEDVG 4011
+ A G ++ A N G NQ ED + S P S AD + T + E
Sbjct: 1332 NKAEIKDGRSEIAPKNSWGKTVNQ-----EDSSKSNPWSTSTIADQTK----TKSNEWSA 1382
Query: 4012 WGK-----PV---SNGDGADWSQQTSAAEDVGWSKPAGNGDDGGS--WKKPTT 4140
WG PV S+ ++ A++ W K D S W TT
Sbjct: 1383 WGSNKSEIPVGWASSNKTEIKDGRSETAQENSWGKTVNQEDSSKSNAWNTSTT 1435
>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao]
Length = 1675
Score = 701 bits (1810), Expect = 0.0
Identities = 476/1417 (33%), Positives = 718/1417 (50%), Gaps = 60/1417 (4%)
Frame = +1
Query: 85 PPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKI 264
P I+ + A LELK S+ W FL E R LLP E +I
Sbjct: 128 PQVSIKEVKTTDGACSLELKQPSRQARTS--WEFL-EKYGFRYGDHHNTRTLLPCEVMEI 184
Query: 265 LKKIPEKIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKI 441
LK+IP + +K+ +G IL +PVPPNC+ +PD G ++ SD MLKK+
Sbjct: 185 LKRIPAETRRKLSGKGF-FPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAMLKKV 243
Query: 442 VSSVQD-KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNP--GSNAQGSDE 612
+ V+ K S G F H+ +LQS QYL+V G K S + G + SD
Sbjct: 244 LKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKDASDS 303
Query: 613 FSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVF 792
+K+ WL+KMR+LFI K G SSR V+TGD Y+ + EIGIP EIA+R+T EE V +
Sbjct: 304 STKA----WLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMH 359
Query: 793 NKEKIRKMVEGGKCHTLSRKDGAKFFG--EAMKLSGNIEVGDLINRSLQEGDIVFINRPP 966
N ++ +V+ C L+ +DG+ + E K + G +++R + +GDIVFINRPP
Sbjct: 360 NMRYLQNLVDNKLC--LTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 417
Query: 967 SIHKHSIQAMRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVD 1146
+ HKHS+QA+ V++H T+ INPLICGPL DFDGDC+H F+P+SL +KAE+ +L SV+
Sbjct: 418 TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVE 477
Query: 1147 KQIFSSHSGEANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGS 1326
KQ+ SSH+G N+ L D+LL+ +++ ++L KA QL+M+ ++P PA L ++
Sbjct: 478 KQLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFG 537
Query: 1327 SLWTAVQVIQTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSER 1506
WTA+Q++QT P ++ G++ LI I +D + +Q ++E+ S+ E G +
Sbjct: 538 PCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKE 597
Query: 1507 ALECLHSLECILVEWLSSSGFSVSIEDFVLPASA--TLKNDLSEISKLIRYMGVGSYQTN 1680
L SL+ +L+E + + GFSVS+EDF + ++ D+ +IS L+ Y +Y
Sbjct: 598 VLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLL-YQLRSTYNEL 656
Query: 1681 ILSQVERGVKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQFFH-GKNAI 1857
+ Q+E ++ + + I +S++ +ID S + +++VQQ+GFLG+Q + GK
Sbjct: 657 VGLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGK--- 713
Query: 1858 PSDWQKRLHTHLPCGESSFLQEYEVESPEVH-GFITSSFISGLNPCEAFIHSVHSREGLL 2034
+ K L + S V+ P G I S F GL+P E +HS+ +RE ++
Sbjct: 714 --FYSKTLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIV 771
Query: 2035 SQKMGLKEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGH 2214
GL EPG LFKNLMA LRDV +CYDGTVRN N ++QFQYG
Sbjct: 772 RSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYG-----------LNAR 820
Query: 2215 FVEKSTPGDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRK 2394
+ G+PVG+LAAT++++PAYKA D ST S S WE+++E L + + DR+
Sbjct: 821 TKPQFPAGEPVGVLAATAMSNPAYKAVLD-STPSSNSSWELMKEILLCKVSLKNDLVDRR 879
Query: 2395 VVLYMKNC-CGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEYQE 2571
V+LY+K+C CG +K+ C E A +++ L+K L+ AV + EY++
Sbjct: 880 VILYLKDCDCG------RKY---------CQENAAYLVKNHLRKVKLKDTAVELIFEYKQ 924
Query: 2572 RWFDAELRAPLLGHIQLDAKRLMGASLSPATLEGFLYDNL---RKKSHPLNSFVDNLRLQ 2742
+ +E A L+GHI L+ L ++S + + + RKK ++F L
Sbjct: 925 QQTVSESEAGLVGHILLNKAVLKELNISMQEVHMKCQETIISFRKKKKTADTF-KRTDLF 983
Query: 2743 ACDACDIAQRSGNDGFAKPCLHFAL--TKESYLASKGHSHSFYSDLYLMVDVLYPRLAET 2916
+ C I Q G CL F TK+ +L L +VD++YP L ET
Sbjct: 984 FSECCSIQQSCGGKWLDMSCLMFFCRNTKDDHLD---------CTLQDLVDIIYPVLLET 1034
Query: 2917 TVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALH 3096
+KGD RI + I W + ++ TW+ S T+ Q GDAW +
Sbjct: 1035 VIKGDPRICSANIIWVSPDTTTWIRSPSKTQK--GELALDVVLEKSAVKQNGDAWRTVID 1092
Query: 3097 SLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIAS 3276
LP + L+D R IPY++ +V +LLG++ A++ +QRL+ ++ ++ +G K HL+L+A+
Sbjct: 1093 CCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLSTSVSMVARGVLKEHLILLAN 1152
Query: 3277 CMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASC 3456
MT G +I +N+ G+K L S+ VPF+E TL TP K FERAAE+ VD LS VASC
Sbjct: 1153 SMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCFERAAEKCHVDSLSSIVASC 1212
Query: 3457 CWGKRAPVGTGSNFEIFWKDLE-GISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLC 3633
WGK VGTGS F++ W E G +Q + +D Y L +L S ++ C
Sbjct: 1213 SWGKHVAVGTGSRFDVLWDRKEVGF-----DQKSGIDVYNFLHML---SSASGPSSTTTC 1264
Query: 3634 IGEDMD--MDV-------CLQSLTNG---SIFGNKAGTDSFPRNKQSNFGRNKPAMDQDT 3777
+GE++D MDV +NG +F + A ++ + + K
Sbjct: 1265 LGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQPAESSWEKGVSLDKV 1324
Query: 3778 SCWNQQQATNGDGPDWNLPSSA-------ADDVGWNKPASNGDGAA-------------- 3894
S WN A N D + ++A +D W S AA
Sbjct: 1325 SSWNVSSAWNKKAEDGDKFAAALTSTTKQSDWCDWGTSKSKTQDAAAAATSTTKKTEWCD 1384
Query: 3895 WNQPTSVTEDVA--WSKPASNGDGADWNQPNQP--------TSATEDVGWGKPVSNGDGA 4044
W S T++VA + A + DW TS T+ WG
Sbjct: 1385 WGTSKSKTQEVAATVTGTAEQNEWCDWRTSKSKIQVVAAAVTSTTKQSEWG--------- 1435
Query: 4045 DWSQQTSAAEDVGWSKPAGNGDDGGSWKKPTTNGDDI 4155
DW S +DV + + G W K + D+
Sbjct: 1436 DWGTSKSKTQDVAAAVTGTMETEWGDWGKGKSKTQDV 1472
>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 701 bits (1810), Expect = 0.0
Identities = 476/1417 (33%), Positives = 718/1417 (50%), Gaps = 60/1417 (4%)
Frame = +1
Query: 85 PPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKI 264
P I+ + A LELK S+ W FL E R LLP E +I
Sbjct: 128 PQVSIKEVKTTDGACSLELKQPSRQARTS--WEFL-EKYGFRYGDHHNTRTLLPCEVMEI 184
Query: 265 LKKIPEKIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKI 441
LK+IP + +K+ +G IL +PVPPNC+ +PD G ++ SD MLKK+
Sbjct: 185 LKRIPAETRRKLSGKGF-FPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAMLKKV 243
Query: 442 VSSVQD-KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNP--GSNAQGSDE 612
+ V+ K S G F H+ +LQS QYL+V G K S + G + SD
Sbjct: 244 LKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKDASDS 303
Query: 613 FSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVF 792
+K+ WL+KMR+LFI K G SSR V+TGD Y+ + EIGIP EIA+R+T EE V +
Sbjct: 304 STKA----WLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMH 359
Query: 793 NKEKIRKMVEGGKCHTLSRKDGAKFFG--EAMKLSGNIEVGDLINRSLQEGDIVFINRPP 966
N ++ +V+ C L+ +DG+ + E K + G +++R + +GDIVFINRPP
Sbjct: 360 NMRYLQNLVDNKLC--LTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 417
Query: 967 SIHKHSIQAMRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVD 1146
+ HKHS+QA+ V++H T+ INPLICGPL DFDGDC+H F+P+SL +KAE+ +L SV+
Sbjct: 418 TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVE 477
Query: 1147 KQIFSSHSGEANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGS 1326
KQ+ SSH+G N+ L D+LL+ +++ ++L KA QL+M+ ++P PA L ++
Sbjct: 478 KQLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFG 537
Query: 1327 SLWTAVQVIQTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSER 1506
WTA+Q++QT P ++ G++ LI I +D + +Q ++E+ S+ E G +
Sbjct: 538 PCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKE 597
Query: 1507 ALECLHSLECILVEWLSSSGFSVSIEDFVLPASA--TLKNDLSEISKLIRYMGVGSYQTN 1680
L SL+ +L+E + + GFSVS+EDF + ++ D+ +IS L+ Y +Y
Sbjct: 598 VLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLL-YQLRSTYNEL 656
Query: 1681 ILSQVERGVKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQFFH-GKNAI 1857
+ Q+E ++ + + I +S++ +ID S + +++VQQ+GFLG+Q + GK
Sbjct: 657 VGLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGK--- 713
Query: 1858 PSDWQKRLHTHLPCGESSFLQEYEVESPEVH-GFITSSFISGLNPCEAFIHSVHSREGLL 2034
+ K L + S V+ P G I S F GL+P E +HS+ +RE ++
Sbjct: 714 --FYSKTLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIV 771
Query: 2035 SQKMGLKEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGH 2214
GL EPG LFKNLMA LRDV +CYDGTVRN N ++QFQYG
Sbjct: 772 RSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYG-----------LNAR 820
Query: 2215 FVEKSTPGDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRK 2394
+ G+PVG+LAAT++++PAYKA D ST S S WE+++E L + + DR+
Sbjct: 821 TKPQFPAGEPVGVLAATAMSNPAYKAVLD-STPSSNSSWELMKEILLCKVSLKNDLVDRR 879
Query: 2395 VVLYMKNC-CGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEYQE 2571
V+LY+K+C CG +K+ C E A +++ L+K L+ AV + EY++
Sbjct: 880 VILYLKDCDCG------RKY---------CQENAAYLVKNHLRKVKLKDTAVELIFEYKQ 924
Query: 2572 RWFDAELRAPLLGHIQLDAKRLMGASLSPATLEGFLYDNL---RKKSHPLNSFVDNLRLQ 2742
+ +E A L+GHI L+ L ++S + + + RKK ++F L
Sbjct: 925 QQTVSESEAGLVGHILLNKAVLKELNISMQEVHMKCQETIISFRKKKKTADTF-KRTDLF 983
Query: 2743 ACDACDIAQRSGNDGFAKPCLHFAL--TKESYLASKGHSHSFYSDLYLMVDVLYPRLAET 2916
+ C I Q G CL F TK+ +L L +VD++YP L ET
Sbjct: 984 FSECCSIQQSCGGKWLDMSCLMFFCRNTKDDHLD---------CTLQDLVDIIYPVLLET 1034
Query: 2917 TVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALH 3096
+KGD RI + I W + ++ TW+ S T+ Q GDAW +
Sbjct: 1035 VIKGDPRICSANIIWVSPDTTTWIRSPSKTQK--GELALDVVLEKSAVKQNGDAWRTVID 1092
Query: 3097 SLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIAS 3276
LP + L+D R IPY++ +V +LLG++ A++ +QRL+ ++ ++ +G K HL+L+A+
Sbjct: 1093 CCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLSTSVSMVARGVLKEHLILLAN 1152
Query: 3277 CMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASC 3456
MT G +I +N+ G+K L S+ VPF+E TL TP K FERAAE+ VD LS VASC
Sbjct: 1153 SMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCFERAAEKCHVDSLSSIVASC 1212
Query: 3457 CWGKRAPVGTGSNFEIFWKDLE-GISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLC 3633
WGK VGTGS F++ W E G +Q + +D Y L +L S ++ C
Sbjct: 1213 SWGKHVAVGTGSRFDVLWDRKEVGF-----DQKSGIDVYNFLHML---SSASGPSSTTTC 1264
Query: 3634 IGEDMD--MDV-------CLQSLTNG---SIFGNKAGTDSFPRNKQSNFGRNKPAMDQDT 3777
+GE++D MDV +NG +F + A ++ + + K
Sbjct: 1265 LGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQPAESSWEKGVSLDKV 1324
Query: 3778 SCWNQQQATNGDGPDWNLPSSA-------ADDVGWNKPASNGDGAA-------------- 3894
S WN A N D + ++A +D W S AA
Sbjct: 1325 SSWNVSSAWNKKAEDGDKFAAALTSTTKQSDWCDWGTSKSKTQDAAAAATSTTKKTEWCD 1384
Query: 3895 WNQPTSVTEDVA--WSKPASNGDGADWNQPNQP--------TSATEDVGWGKPVSNGDGA 4044
W S T++VA + A + DW TS T+ WG
Sbjct: 1385 WGTSKSKTQEVAATVTGTAEQNEWCDWRTSKSKIQVVAAAVTSTTKQSEWG--------- 1435
Query: 4045 DWSQQTSAAEDVGWSKPAGNGDDGGSWKKPTTNGDDI 4155
DW S +DV + + G W K + D+
Sbjct: 1436 DWGTSKSKTQDVAAAVTGTMETEWGDWGKGKSKTQDV 1472
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 701 bits (1808), Expect = 0.0
Identities = 480/1458 (32%), Positives = 737/1458 (50%), Gaps = 103/1458 (7%)
Frame = +1
Query: 112 KNENASFLELKVTSKSHLFDDYWTFL---GEHXXXXXXXXXXXRVLLPYEASKILKKIPE 282
K + S L LKV S L + +W FL G R LLP E +I KKIPE
Sbjct: 137 KKDTYSHLRLKVPSNKKLHEGFWNFLERYGFRYGGSPGEELLRRTLLPCEVMEIFKKIPE 196
Query: 283 KIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD 459
+ KK+ V DG IL +PVPPNC+ +P+ G T+ +D MLKK++ +
Sbjct: 197 ETRKKL-VGKGYFPQDGYILQYLPVPPNCLSVPEISDGITIMSTDPSTSMLKKVLRQGEI 255
Query: 460 KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFSKSFANFW 639
+S+ + F + ELQS+ QYL+V G+ K S + + E S W
Sbjct: 256 IKSSRSQPNFESLEVEANELQSIVNQYLQVRGSVKASRDIDARFGV--NKEEKNSSRKVW 313
Query: 640 LDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMV 819
L+KMR+LFI K G SSR V+TGD Y+ + E+GIP EIA+ +T EE V+ N + ++++V
Sbjct: 314 LEKMRTLFIRKGSGFSSRSVITGDAYKAVNEVGIPYEIARWITFEEKVSSHNMKYLQELV 373
Query: 820 EGGKCHTLSRKDGAKFFG--EAMKLSGNIEVGDLINRSLQEGDIVFINRPPSIHKHSIQA 993
+ C L+ KDG+ + E K +++G +++R + +GDIVFINRPP+ HKHS+QA
Sbjct: 374 DNKLC--LTYKDGSSTYSLREGSKGHTFLKLGQVVHRRIMDGDIVFINRPPTTHKHSLQA 431
Query: 994 MRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQIFSSHSG 1173
+RV++H T+ INPLICGPL DFDGDC+H F+P+S +KAE+L+L S++KQI SSHSG
Sbjct: 432 LRVYVHEDNTVKINPLICGPLSADFDGDCVHLFYPQSPAAKAEVLELFSLEKQILSSHSG 491
Query: 1174 EANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLWTAVQVI 1353
+ L D+LL+ K++ ++ F+DK QL M+A S+P PA H+G WTA+QV+
Sbjct: 492 GMILQLACDSLLSLKIMFKTYFMDKIAAQQLVMFASSSLPQPAFWLTHSGDPFWTALQVL 551
Query: 1354 QTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALECLHSLE 1533
QT LP +++ G++ LIK I +D ++ +++I S+ E GSE L+ ++L+
Sbjct: 552 QTALPTSLDCYGDRFLIKGSDILVLDFNR--DVSVINDIGASICSEKGSEEVLKFFNALQ 609
Query: 1534 CILVEWLSSSGFSVSIEDFVLPASATLKN---DLSEISKLIRYMGVGSYQTNILSQVERG 1704
+L+E + + GFSV +EDF + + +KN D+ IS L+ ++ +Y + Q+E
Sbjct: 610 PLLMENIFAQGFSVGLEDFSI-SQEVIKNITKDIQLISPLLYHLR-STYNELVELQLENQ 667
Query: 1705 VKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQFF-HGKNAIPSDWQKRL 1881
++ + + I S+S +ID S + +++VQQ+GFLG+Q GK + K L
Sbjct: 668 IRFAKAPVTNFILKSSSMGNLIDPKSDSAINKVVQQIGFLGLQISDRGK-----FYSKTL 722
Query: 1882 HTHLPCGESSFLQEYEVESPEV-HGFITSSFISGLNPCEAFIHSVHSREGLLSQKMGLKE 2058
+ C + E V+ P HG I S F GL+P E +HS+ +RE ++ GL E
Sbjct: 723 VEDVSCLYTRKYPE-NVDYPSAEHGLIRSCFFHGLDPYEEIVHSISTREVIVRSSRGLTE 781
Query: 2059 PGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGHFVEKSTPG 2238
PG LFKNLMA LRDV +CYDGTVRN C N ++QF+YG+ G G
Sbjct: 782 PGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGR------------GSARNLYPAG 829
Query: 2239 DPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRKVVLYMKNC 2418
+PVG+LAAT++++PAYKA D S+ S S WE+++E L + + DR+V+LY+ N
Sbjct: 830 EPVGVLAATAMSNPAYKAVLD-SSPSSNSSWELMKEILLCKAIFRNELIDRRVILYL-NH 887
Query: 2419 CGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEY--QERWFDAEL 2592
CG G +K+ C E+ +Q+ LKK L+ AV +EY Q + ++
Sbjct: 888 CGCG----RKY---------CREQATYLVQNQLKKVSLKDTAVEFMIEYKNQSSFSAVDM 934
Query: 2593 RAPLLGHIQLDAKRL----MGASLSPATLEGFLYDNLRKKSHPLNSFVDNLRLQACDACD 2760
A L+GHI L+ L +G + E + +++RKK L + L + C
Sbjct: 935 NAGLVGHIHLNEVLLKEMDIGMNEILQKCEEAI-NSVRKKK--LGKHLKKAVLSVSECCT 991
Query: 2761 IAQRSGNDGFAK-PCLHFALTKESYLASKGHSHSFYSDLYLMVDVLYPRLAETTVKGDDR 2937
+SG DG ++ PCL ++ + + + ++ D + P L ET +KGD R
Sbjct: 992 F-HKSGLDGTSEFPCLLISIRENM-------NDTLEESSKILADSICPFLLETIIKGDSR 1043
Query: 2938 IEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQR-GDAWEKALHSLLPFM 3114
I + +I+W + ++ S + +N +R GDAW + S LP +
Sbjct: 1044 ISSAKITWLSSDT----TSIRSPQNSDMGELAVDVVLDKSAIKRSGDAWRIVIDSCLPVL 1099
Query: 3115 ELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCMTLTG 3294
L+D R IPY + ++ +LLG++ A+ +QRL+ ++ ++ KG K HL+L+A+ MT G
Sbjct: 1100 HLIDTRRSIPYGIKQIQELLGISCAFDQAVQRLSTSVSMVSKGVLKEHLILLANSMTYAG 1159
Query: 3295 KVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCWGKRA 3474
+I +N+ G+K L S+ VPFTE TL TP + FERAAE+ VD L+ VASC WGK
Sbjct: 1160 NLIGFNSGGYKALTRSLNVQVPFTEATLITPKRCFERAAEKCHVDSLTSIVASCSWGKHV 1219
Query: 3475 PVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIGEDMD- 3651
VGTGS F+I W + + N+ + L + S + S+ C+GE++D
Sbjct: 1220 AVGTGSRFDILW-------DTRKVEFNQAGGVDVNNFLHMVSTAYGEEASTACLGEEIDD 1272
Query: 3652 -------MDVC-----------------------------------LQSLTNGSIFGNKA 3705
++C L S +GS G +
Sbjct: 1273 LMPGDDIAELCLSPENFNSDRPVFEDIDEFQDISEKDLPGKSSWDNLSSFRSGSSSGKEW 1332
Query: 3706 GTDSFPRNKQ---SNFG-RNK------PAMDQDTSCWNQQQATNGDG--------PDWN- 3828
G+++ K S++G NK P+ + + W+ G DW
Sbjct: 1333 GSNNNVGTKYDVGSSWGTANKEEQEVIPSKGEPDNSWSNGWENKNSGRMELETMKSDWRG 1392
Query: 3829 -------------LPSSAADDV-----GWNKPASN---GDGAAWNQPTSVTEDVAWSKPA 3945
SS DV GW ++ WN +++ WSK
Sbjct: 1393 DADERHNPFSSKPQESSKRSDVWDATPGWGTNTASEKVSSSTGWNS-ENISSGAGWSKAD 1451
Query: 3946 S-NGDGADWNQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVGWSKPAGNGDDGGS 4122
S N WN N + A GW K S+ A + + + GWSK +
Sbjct: 1452 SDNSHAKGWNSENISSGA----GWSKAGSDNSHAKGWKSENISSGAGWSKADSDNSHAKG 1507
Query: 4123 WKKPTTNGDDIGWNQTAA 4176
W + GW++ +
Sbjct: 1508 WNSENIS-SGAGWSKAGS 1524
>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
Length = 2017
Score = 700 bits (1806), Expect = 0.0
Identities = 468/1453 (32%), Positives = 721/1453 (49%), Gaps = 81/1453 (5%)
Frame = +1
Query: 76 RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 255
RD P ++ + A LELK+ + + + W FL ++ R LLP EA
Sbjct: 128 RDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFHHGGTSHC-RTLLPEEA 186
Query: 256 SKILKKIPEKIMKKICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 432
ILKKIPE+ +K+ +S G ++ +PVPPNC+ IP+ G ++ D + +L
Sbjct: 187 LNILKKIPEETKRKLAARGYIAQS-GYVMKYLPVPPNCLYIPEFTDGQSIMSYDISISLL 245
Query: 433 KKIVSSVQD-KQSTMGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQG-- 603
KK++ ++ K+S G F H+ + +LQ QY+ + G TT P N +
Sbjct: 246 KKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRG-----TTRGPQDNTKRFA 300
Query: 604 -SDEFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEW 780
S + S WL+KMR+LFISK G SSR V+TGD Y G+ IG+P E+AKR+T EE
Sbjct: 301 ISTDPSALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQ 360
Query: 781 VTVFNKEKIRKMVEGGKCHTLSRKDGAKFFGEAMKLSGN--IEVGDLINRSLQEGDIVFI 954
VT N +++++V+ G C L+ +DG + + G+ ++VG I+R + +GD+VF+
Sbjct: 361 VTDINLNRLQEIVDKGLC--LTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFL 418
Query: 955 NRPPSIHKHSIQAMRVFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQL 1134
NRPPS HKHS+QA RV++H T+ INPLIC P DFDGDC+H ++P+SL +KAE L+L
Sbjct: 419 NRPPSTHKHSLQAFRVYVHEDHTVKINPLICAPFAADFDGDCVHIYYPQSLAAKAEALEL 478
Query: 1135 LSVDKQIFSSHSGEANIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSP 1314
SV+KQ+ SSHSG+ N+ L D+LLA K +S + K QLAM S+PDPA++
Sbjct: 479 FSVEKQLTSSHSGKVNLQLVSDSLLALKHMSSRTMLSKEAANQLAMLVTCSLPDPAVIK- 537
Query: 1315 HNGSSLWTAVQVIQTVLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEED 1494
WT Q++Q LP + +G+K +++ I +D DK +Q + S++ S +
Sbjct: 538 --SKPYWTISQIVQGALPKALTSQGDKHVVRDSTIIKLDLDKESVQTSFSDLVYSTLSVK 595
Query: 1495 GSERALECLHSLECILVEWLSSSGFSVSIEDFVLPASATLKNDLSEISKLIRYMGVGSYQ 1674
G AL+ L+ L+ +L+E + GFSVS++DF +P L+ I K + +
Sbjct: 596 GPGEALQFLNVLQPLLMELILLDGFSVSLQDFNVP-KVLLEEAQKNIEKQSLILEQSRFA 654
Query: 1675 TN--ILSQVERGVKDLQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQF---- 1836
N + +V+ +KD++ +I + + +ID S S S++VQQ+GF+G+Q
Sbjct: 655 ENQVVEMRVDNNLKDIKQQISDFVVKRSHLGLLIDPKSDSSVSKVVQQLGFVGLQLYREG 714
Query: 1837 -FHGKNAIPSDWQKRLHTHLPCGESSFLQEYEVESPEVHGFITSSFISGLNPCEAFIHSV 2013
F+ + + + ++ H E SPE +G + SS+ GLNP E +H++
Sbjct: 715 KFYSRRLVEDCYYTFVNKHPAVREE--------HSPEAYGLVRSSYFHGLNPYEELVHAI 766
Query: 2014 HSREGLLSQKMGLKEPGVLFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXX 2193
+RE ++ GL EPG LFKNLMA LRDV +CYDGTVRN C ++Q Y + D
Sbjct: 767 STREAIVRSSRGLTEPGTLFKNLMALLRDVVICYDGTVRNVCSKSIIQLNYTEDDALD-- 824
Query: 2194 XXXXXGHFVEKSTPGDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGV 2373
F PG+PVG+LAAT+I++PAYKA DAS + S WE ++E L+
Sbjct: 825 -------FPSAIGPGEPVGVLAATAISNPAYKAVLDASQSNNTS-WERMKEILQTTSRYK 876
Query: 2374 LKHRDRKVVLYMKNC-CGAGIFTEKKFLGMEKHDVTCCEKIA------------------ 2496
+DRKV+L++ +C C EK + ++ C +I
Sbjct: 877 NDMKDRKVILFLNDCSCAKKFCKEKAAIAVQG----CLRRITLEDCATDICIEDGNWAAP 932
Query: 2497 AGIQDALKKEILESFAVNI--------------------------FVEYQERWF---DAE 2589
AG Q + + V I V YQ++ +E
Sbjct: 933 AGFQHPVPPPQCKILPVPIPIPAHGSVKFPPVPIPAPEHLKYNIHVVRYQKQIGLDGTSE 992
Query: 2590 LRAPLLGHIQLDAKRLMGASLSPATLEGFLYD---NLRKKSHPLNSFVDNLRLQACDACD 2760
L+GHI LD L ++S + + KK L++ N+ CD C
Sbjct: 993 AAPALVGHIHLDRAHLERINISTEDILQKCQEVSGKYGKKKGHLSNLFKNITFSTCD-CL 1051
Query: 2761 IAQRSGNDGFAK-PCLHFALTKESYLASKGHSHSFYSDLYLMVDVLYPRLAETTVKGDDR 2937
Q+ + K PCL F ++ + S S + ++ D L L T +KGD R
Sbjct: 1052 FTQKLVDGKLPKLPCLQFFVSDNMIV-----SESVERAVSVLADSLCGVLLNTIIKGDPR 1106
Query: 2938 IEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALHSLLPFME 3117
I+ +I W ++ +WV K + GDAW + + +P +
Sbjct: 1107 IQEAKIVWVGSDATSWV--KNTQKASKGEPAVEIIVEEEEALHIGDAWRTTMDACIPVLN 1164
Query: 3118 LLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCMTLTGK 3297
L+D R IPY + +V +LLG++ A+ ++QRL+ + ++ K K+HL+L+A+ MT TG
Sbjct: 1165 LIDIRRSIPYGIQQVRELLGISCAFDQVVQRLSTTVRMVAKDVLKDHLVLVANSMTFTGN 1224
Query: 3298 VIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCWGKRAP 3477
+ +N AG+K + S+K VPFTE TL TP+K FE+AAE+ D L V+SC WGK A
Sbjct: 1225 LNGFNNAGYKATFRSLKVQVPFTESTLITPMKCFEKAAEKCHSDSLGCVVSSCSWGKHAA 1284
Query: 3478 VGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVK--PSSLCIGEDMD 3651
GTGS+F+I W E K +E + L Y+ L ++ D E + + E+ +
Sbjct: 1285 SGTGSSFQILWN--ESQLKSNKEYGDGL--YDYLALVRTDEEKARYTFFDDVDYLAEENE 1340
Query: 3652 MDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDT---SCWNQQQATNGDGPD 3822
DVCL +G+I G F N + +N + D T + W Q + D
Sbjct: 1341 ADVCLSPELDGTI-----GQPIFDDNLEEQDVQNNSSWDNGTTTNASWEQNGSAGNDSDK 1395
Query: 3823 WN--LPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVAWSKPASNGDGADWNQPNQPTSA 3996
W ++A D G KPA+ G+ + W+ P +V K +S+ G + +
Sbjct: 1396 WGGWNDAAAGADTGVTKPANQGN-SCWDVPATV------EKSSSDWGGWGTEKAKEKEKI 1448
Query: 3997 TEDV----GW---GKPVSNGDGADWSQQTSAAED-VGWSKPAGNGDDGGSWKKPTTNGDD 4152
+E+ W G + GA W +Q+S D W + G G +GGSW+K
Sbjct: 1449 SEEPAQHDAWSVQGPKRATDGGASWKKQSSTQNDGNSWKENKGRGSNGGSWEKDNAQKGS 1508
Query: 4153 IGWNQTAAAPEDD 4191
G A +D
Sbjct: 1509 WGRGNDEAENNND 1521
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 697 bits (1800), Expect = 0.0
Identities = 471/1388 (33%), Positives = 717/1388 (51%), Gaps = 43/1388 (3%)
Frame = +1
Query: 118 ENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMKK 297
+ A FLELK+ S+S L D W FL + R LLP E +ILK+IP + KK
Sbjct: 143 DGACFLELKLPSRSRLRDGCWNFLERYGFRYGDDFT--RPLLPCEVMQILKRIPAETRKK 200
Query: 298 ICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQST 471
+ DG IL +PVPPNC+ +P G TV SD + MLKK++ + + S
Sbjct: 201 LSGKGY-FPQDGYILQQLPVPPNCLSVPVVSDGITVMSSDLSISMLKKVLKQAEVIRSSR 259
Query: 472 MGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFSKSFANFWLDKM 651
G F HK+ LQS+ QYL+V G K S + + E S+S WL+KM
Sbjct: 260 SGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTSRDVDTRYGVK--KESSESTTKAWLEKM 317
Query: 652 RSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEGGK 831
R+LFI K G SSR V+TGD Y + ++GIP EIA+R+T EE V+V N ++++V+
Sbjct: 318 RTLFIRKGSGFSSRSVITGDAYTLVNQVGIPYEIAQRITFEERVSVHNMRYLQELVDNKL 377
Query: 832 CHTLSRKDGAKFFG--EAMKLSGNIEVGDLINRSLQEGDIVFINRPPSIHKHSIQAMRVF 1005
C L+ KDG+ + E K + G +++R + +GDIVFINRPP+ HKHS+QA+ V+
Sbjct: 378 C--LTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVY 435
Query: 1006 LHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQIFSSHSGEANI 1185
+H + INPLICGPL DFDGDC+H F+P+SL +KAE+L+L SV+KQ+ SSHSG N+
Sbjct: 436 VHDDHAVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNL 495
Query: 1186 VLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLWTAVQVIQTVL 1365
LT D+LL+ K++ ++ F+ K+ QLAM+ +P PA+L + WTA Q++Q L
Sbjct: 496 QLTTDSLLSLKMMFKACFLGKSAAQQLAMFISPYLPQPALLKVNCFFPHWTAHQILQMAL 555
Query: 1366 PDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALECLHSLECILV 1545
P N G + LI + +D ++ + ++EI S+ E GS L+ +SL+ +L+
Sbjct: 556 PACFNCSGERFLIINSNFLKVDFNRDVVASVINEILISMFFEKGSGAVLKFFNSLQPMLM 615
Query: 1546 EWLSSSGFSVSIEDFVLPASATLKNDLSEISKLIRYMGV---GSYQTNILSQVERGVKDL 1716
E L S GFSVS+EDF + S +K + E K I + ++ + QVE ++D+
Sbjct: 616 ENLFSEGFSVSLEDFSI--SRAVKQRIPESFKAISPLLCNLRSTFNELVELQVENHIRDV 673
Query: 1717 QNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQFFHGKNAIPSDWQKRLHTHLP 1896
+ + I +S++ +ID S + +++VQQ+GFLG+Q + L +H
Sbjct: 674 KQPVREFILTSSALGYLIDSKSDAAVTKVVQQIGFLGLQVSDRGKLYSKTLVEDLASHFL 733
Query: 1897 CGESSFLQEYEVESPEVHGFITSSFISGLNPCEAFIHSVHSREGLLSQKMGLKEPGVLFK 2076
+ L +Y +G I +SF GL+ E HS+ +RE ++ GL EPG LFK
Sbjct: 734 SKYPANLFDYPSAQ---YGLIQNSFFHGLDAYEEMAHSISTREVIVRSSRGLSEPGTLFK 790
Query: 2077 NLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGHFVEKSTP-GDPVGI 2253
NLMA LRDV +CYDGTVRN N ++QF+YG G + P G+PVG+
Sbjct: 791 NLMAILRDVVICYDGTVRNVSSNSIIQFEYG----------VKVGTESQSLFPAGEPVGV 840
Query: 2254 LAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRKVVLYMKNC-CGAG 2430
LAAT++++PAYKA D ST S W++++E L + DR+V+LY+ +C CG
Sbjct: 841 LAATAMSNPAYKAVLD-STPSSNCSWDMMKEILLCKVGFKNDLADRRVILYLNDCGCGRN 899
Query: 2431 IFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEYQERWFDAEL--RAPL 2604
C E+ A +++ L+K L+ A +EY+ + A L
Sbjct: 900 Y---------------CQERAAYLVKNHLEKVSLKDIAKCFMIEYKSQQIPESFGSDAGL 944
Query: 2605 LGHIQLDAKRLMGASLSPATLEGFLYDNL---RKKSHPLNSFVDNLRLQACDACDIAQRS 2775
+GH+ LD ++L +++ + + + RKK N F + L ++C Q
Sbjct: 945 VGHVHLDKRKLQDLNITAQVILEKCQETVNTFRKKKKVGNLFKKTI-LLVSESCSFQQCI 1003
Query: 2776 GNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVDVLYPRLAETTVKGDDRIEAVRI 2955
PCL F + + S+ ++ D++ P L ET +KGD RI I
Sbjct: 1004 DE----SPCLMFFWQGADDVHLERTSN-------ILADMICPVLLETIIKGDHRISCANI 1052
Query: 2956 SWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALHSLLPFMELLDDSR 3135
W E+ TW+ + +R + + GDAW L S LP + L++ +R
Sbjct: 1053 IWATPETNTWI--RNPSRTQKGELALDIVLEKSVVKKSGDAWRIVLDSCLPVLHLINTTR 1110
Query: 3136 CIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCMTLTGKVIAYNA 3315
IPY++ +V +LLGV+ A+ +QRL+ ++ ++ KG K HL+L+ + MT G +I +
Sbjct: 1111 SIPYAIKQVQELLGVSCAFDTAVQRLSKSVTMVAKGVLKEHLILLGNSMTCAGSLIGFYT 1170
Query: 3316 AGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCWGKRAPVGTGSN 3495
G+K L S+ VPFTE TL TP K FE+AAE+ D LS VASC WGK VGTGS+
Sbjct: 1171 GGYKTLSRSLDIQVPFTEATLFTPRKCFEKAAEKCHTDSLSSIVASCAWGKHVTVGTGSH 1230
Query: 3496 FEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIGEDMDMDVCLQ-- 3669
F++ W E P +D Y L ++ + GE + + C+G ++D D+ L+
Sbjct: 1231 FDVLWDTKEACLNPE----GSMDVYSFLNMVRSTAGGE--ESVTACLGAEVD-DLMLEDE 1283
Query: 3670 ---------SLTNGSIFGNKAGTDSFPRNK--QSNFGRNKPAMDQDTSCWNQQQATNGDG 3816
S ++ F + A F N+ +SN+ + D+ S N N DG
Sbjct: 1284 DWNLSPEHNSSSDKPTFEDSAEFQDFLGNQPAESNWEKISSLKDRSRSSGNWDVDKN-DG 1342
Query: 3817 ----PDWNL--PSSAADDV---GWNKPASNGDGAAWNQPTSVTEDVAWS-----KPASNG 3954
W+L ++ A+DV GW+ A+ +WN +V + ++S KP +
Sbjct: 1343 AVKEKPWSLGMNTAEANDVASSGWDTAAARTTNNSWNSENNVAQSNSFSGWATKKPEPHN 1402
Query: 3955 DGADWNQPNQPTSATEDVG--WGKPVSNGDGADWSQQTSAAEDVGWSKPAGNGDDGGSWK 4128
A Q TS D G WG+ D + +T+A++ W +GD+ G K
Sbjct: 1403 GFATKVQEEPTTSNDWDAGAAWGRK----DRDNKFAETNASK--SWWGKVTDGDESGQNK 1456
Query: 4129 KPTTNGDD 4152
+D
Sbjct: 1457 SKNKRPED 1464
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 696 bits (1797), Expect = 0.0
Identities = 467/1428 (32%), Positives = 721/1428 (50%), Gaps = 70/1428 (4%)
Frame = +1
Query: 118 ENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMKK 297
+ A +L LKV SKS + D +W FL ++ R LLP E +I+K+ P++ +K
Sbjct: 142 DGACYLALKV-SKSKMHDGFWGFLEKYGYRYGGDHT--RALLPCEVMEIIKRFPQETNRK 198
Query: 298 ICVNPLAVKSDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQST 471
+ + DG +L +PVPPNC+ +P G +V SD + +L+K++ V+ + S
Sbjct: 199 LAIKGY-FPQDGYVLKYLPVPPNCLSVPVVSDGVSVMSSDPAMTILRKLLRKVEIIRSSR 257
Query: 472 MGKNKFSVHKEATKELQSLFTQYLKVMGAPKVSTTFNP--GSNAQGSDEFSKSFANFWLD 645
G+ F H+ +LQS+ QYL+V G K + G N + +D +K+ WL+
Sbjct: 258 SGEPNFESHQVEANDLQSVVDQYLQVRGTSKATRDIETRYGVNKELNDSSTKA----WLE 313
Query: 646 KMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEG 825
KMR+LFI K G SSR V+TGD Y+ I E+GIPLE+A+R+T EE V++ N ++K+V+
Sbjct: 314 KMRTLFIRKGSGFSSRNVITGDGYKKINEVGIPLEVAQRITFEERVSIHNIRYLQKLVDE 373
Query: 826 GKCHTLSRKDGAKFFG--EAMKLSGNIEVGDLINRSLQEGDIVFINRPPSIHKHSIQAMR 999
C L+ K+G + E K ++ G +++R + +GD+VFINRPP+ HKHS+QA+
Sbjct: 374 NMC--LTYKEGVSTYSLREGSKGHTYLKPGQIVHRRIMDGDVVFINRPPTTHKHSLQALV 431
Query: 1000 VFLHPGKTMVINPLICGPLGGDFDGDCLHTFFPKSLESKAELLQLLSVDKQIFSSHSGEA 1179
V++H T+ INPLICGPLG DFDGDC+H F+P+SL +KAE+L+L SV+KQ+ SSHSG
Sbjct: 432 VYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNL 491
Query: 1180 NIVLTVDTLLAAKLISQSLFVDKATMAQLAMWALRSVPDPAILSPHNGSSLWTAVQVIQT 1359
N+ L+ D+LL+ K++ +S F+D+A Q+AM+ +P PA+ +G S WT+VQ++Q
Sbjct: 492 NLQLSTDSLLSLKMLVKSCFLDRAAANQMAMFLSLPLPMPALFKAGSGDSYWTSVQMLQC 551
Query: 1360 VLPDNMNLKGNKSLIKSGIIHAMDADKYEIQDTLSEIFKSLVEEDGSERALECLHSLECI 1539
LP + + G + LI+ I D + + ++E+ S+ G + AL L+
Sbjct: 552 ALPSSFDCTGGRYLIRQREILEFDFTRDLLPSIINEVAASIFFSQGPKEALNFFDVLQPF 611
Query: 1540 LVEWLSSSGFSVSIEDFVLPASA--TLKNDLSEISKLIRYMGVGSYQTNILSQVERGVKD 1713
L+E + + G+SV ++DF + + + + +IS L+ + V Y+ + Q+E+ ++D
Sbjct: 612 LMENIFAHGYSVGLQDFSISRAVKRVINRSIGKISPLLHQLRV-VYKELVAQQLEKHMQD 670
Query: 1714 LQNKIIREIPSSNSFIKMIDCTSSKSTSRIVQQVGFLGIQFFHGKNAIPSDWQKRL--HT 1887
++ +I S +ID S + ++VQQ+GFLG Q F + + H
Sbjct: 671 IELPVINFALKSTKLGDLIDSKSKSALDKVVQQIGFLGQQLFERGKFYSKGLVEDVGSHF 730
Query: 1888 HLPCGESSFLQEYEVESPEVHGFITSSFISGLNPCEAFIHSVHSREGLLSQKMGLKEPGV 2067
H+ C F S E G + F GL+P E +HS+ +RE ++ GL EPG
Sbjct: 731 HVKC----FYDGDGYPSAE-FGLLKGCFFHGLDPYEELVHSIATREIIVRSSRGLSEPGT 785
Query: 2068 LFKNLMAFLRDVTVCYDGTVRNACGNFLVQFQYGKFDDNGXXXXXXXGHFVEKSTP---- 2235
LFKNLMA LRDV +CYDGTVRN C N ++QF+YG +KS P
Sbjct: 786 LFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSG-------------DKSQPLFPA 832
Query: 2236 GDPVGILAATSIASPAYKAFSDASTQKSVSPWEILEETLKGRDNGVLKHRDRKVVLYMKN 2415
G+PVG+LAATS+++PAYKA DAS S S WE ++E L + N + DR+V+LY+ +
Sbjct: 833 GEPVGVLAATSMSNPAYKAVLDAS-PSSNSSWEFMKEILLCKVNFRNEPNDRRVILYLND 891
Query: 2416 C-CGAGIFTEKKFLGMEKHDVTCCEKIAAGIQDALKKEILESFAVNIFVEYQE--RWFDA 2586
C CG C E A +++ L+K L+ A++ VEYQ+ R D
Sbjct: 892 CDCGRSY---------------CRENAAYLVKNQLRKVSLKDAALDFTVEYQQQRRRNDG 936
Query: 2587 ELRAPLLGHIQLDAKRLMGASLSPATLEGFLYDNLR--KKSHPLNSFVDNLRLQACDACD 2760
A L+GHI L+ L ++ + + + L + + F L ++C
Sbjct: 937 SEDAGLVGHIHLNEAMLEKLKINMSEVYQKCQERLNSFSRKKKVFHFFRKTELFFSESCS 996
Query: 2761 IAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVDVLYPRLAETTVKGDDRI 2940
S PC+ + L G ++ D++ P L +T ++GD RI
Sbjct: 997 SLNSSA------PCV-------TILWPDG--DDLDQTTKVLADMICPVLLDTIIQGDPRI 1041
Query: 2941 EAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXXTQRGDAWEKALHSLLPFMEL 3120
+ I W N + TWV + +++ Q GDAW L S LP + L
Sbjct: 1042 SSANIIWVNPGTNTWV--RNPSKSSNGELALDVILEKEAVKQSGDAWRIILDSCLPVLHL 1099
Query: 3121 LDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCMTLTGKV 3300
+D R PY++ ++ +LLG++ + IQRL ++ ++ KG + HL+L+AS MT G +
Sbjct: 1100 IDTRRSTPYAIKQIQELLGISCTFDQAIQRLAASVRMVAKGVLREHLILLASSMTCGGNL 1159
Query: 3301 IAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCWGKRAPV 3480
+ +N G+K L + VPFT+ TL TP K FERAAE+ D LS VASC WGK V
Sbjct: 1160 VGFNTGGYKTLARQLNIQVPFTDATLFTPRKCFERAAEKRHADSLSSIVASCSWGKHVAV 1219
Query: 3481 GTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIGEDMD--- 3651
GTGS F+I W E S +E +D Y L ++ + G+ + ++ C+GED+D
Sbjct: 1220 GTGSRFDIVWDPKEVKSNEIE----GMDVYNFLNMVKGLANGD--EENNACLGEDIDDLL 1273
Query: 3652 ----MDVCLQ---------------SLTNGSI---FGNKAGTDSFPRNKQSNFGRNKPAM 3765
MD + L NGS + + + N S +G+NK +
Sbjct: 1274 DDDNMDWGMSPEHTSGFDAVFDESFELLNGSTSNGWDSNKDQNKTTTNDWSGWGQNKSEI 1333
Query: 3766 DQD---TSCW--NQQQATNGDGPDWNLPSSAADDVGWNKPASNGDGAAW-NQPTSVTED- 3924
D T W Q D + S A + G N+ N D +W T V +D
Sbjct: 1334 QVDVAETDQWGSGSTQKWKADITKEDSSKSGAWETGTNQ---NSDQPSWGGNKTGVQDDG 1390
Query: 3925 ---VAWSKPASNGDGADWNQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVG---- 4083
W +S +D N+ + + A E N D W + S +D G
Sbjct: 1391 VVKTQWESGSSQKLKSDINKDSSKSGAWE----ASTNQNNDQPSWGRNKSGVQDDGAVKT 1446
Query: 4084 -WSKPAG----------NGDDGGSWKKPTT-NGDDIGWNQTAAAPEDD 4191
W + N G+W+ T N D W + + +DD
Sbjct: 1447 QWESGSSQKWKTDVIQENSSKSGAWEANTNKNSDQPSWGKNKSGIQDD 1494