BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00000722
         (1333 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002519959.1| photosystem II protein K (chloroplast) [Ephe...   108   5e-21
ref|YP_001876582.1| photosystem II protein K [Welwitschia mirabi...    87   1e-14
gb|ABK23136.1| unknown [Picea sitchensis]                              87   1e-14
dbj|BAN16931.1| photosystem II protein K (chloroplast) [Gnetum ula]    87   2e-14
ref|YP_002519777.1| photosystem II protein K [Gnetum parvifolium...    86   3e-14
ref|YP_004891756.1| photosystem II protein K (chloroplast) [Pice...    81   9e-13
gb|ACP52372.1| photosystem II protein K [Pinus parviflora var. p...    80   1e-12
gb|ACP50751.1| photosystem II protein K [Pinus ponderosa] gi|356...    80   2e-12
ref|YP_007475596.1| PsbK (chloroplast) [Podocarpus totara] gi|35...    79   3e-12
ref|YP_004276217.1| photosystem II protein K [Pinus lambertiana]...    79   3e-12
gb|AEX95365.1| photosystem II protein K (chloroplast) [Eriosperm...    79   4e-12
ref|YP_004891493.1| photosystem II protein K (chloroplast) [Taiw...    79   4e-12
gb|ACP51935.1| photosystem II protein K [Pinus cembra]                 79   4e-12
ref|YP_008082318.1| photosystem II protein K (chloroplast) [Pinu...    79   4e-12
ref|YP_002836073.1| photosystem II protein K [Megaleranthis sani...    79   4e-12
ref|YP_004891399.1| photosystem II protein K (chloroplast) [Pseu...    79   6e-12
gb|ABQ02203.1| PsbK [Ptilimnium costatum] gi|146148499|gb|ABQ022...    79   6e-12
ref|YP_001531266.1| psbK gene product (chloroplast) [Lolium pere...    79   6e-12
gb|AFA26752.1| photosystem II protein K, partial [Apostasia wall...    78   7e-12
gb|AER45578.1| psbK (chloroplast) [Halocarpus kirkii]                  78   7e-12

>ref|YP_002519959.1| photosystem II protein K (chloroplast) [Ephedra equisetina]
            gi|220983560|dbj|BAH11327.1| photosystem II protein K
            (chloroplast) [Ephedra equisetina]
          Length = 54

 Score =  108 bits (270), Expect = 5e-21
 Identities = 54/57 (94%), Positives = 54/57 (94%)
 Frame = -1

Query: 1228 MLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            MLTILFFQNTF   SNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR
Sbjct: 1    MLTILFFQNTF---SNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 54


>ref|YP_001876582.1| photosystem II protein K [Welwitschia mirabilis]
            gi|254783443|sp|B2Y1W5.1|PSBK_WELMI RecName:
            Full=Photosystem II reaction center protein K;
            Short=PSII-K; Flags: Precursor
            gi|163311637|gb|ABY26795.1| photosystem II protein K
            [Welwitschia mirabilis] gi|220983454|dbj|BAH11223.1|
            photosystem II protein K (chloroplast) [Welwitschia
            mirabilis]
          Length = 56

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 42/57 (73%), Positives = 47/57 (82%)
 Frame = -1

Query: 1228 MLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            ML  L  QNTFV+ SN   CKLPEAYA FDP+V++MP+IPVFFFLLAFVWQA VSFR
Sbjct: 1    MLNFLL-QNTFVLWSNFILCKLPEAYAVFDPIVDVMPVIPVFFFLLAFVWQAAVSFR 56


>gb|ABK23136.1| unknown [Picea sitchensis]
          Length = 59

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 42/59 (71%), Positives = 49/59 (83%)
 Frame = -1

Query: 1234 PVMLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            PVML I F  + F+ S+N+FF KLPEAYA FDP+V++MPIIPV FFLLAFVWQA VSFR
Sbjct: 2    PVMLNI-FLDDAFIYSNNIFFGKLPEAYAIFDPIVDVMPIIPVLFFLLAFVWQAAVSFR 59


>dbj|BAN16931.1| photosystem II protein K (chloroplast) [Gnetum ula]
          Length = 56

 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = -1

Query: 1210 FQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            F N FV+ SN   CKLPEAYA+FDP+V++MPIIPVFFFLLAFVWQA VSFR
Sbjct: 6    FTNAFVLWSNFILCKLPEAYASFDPIVDVMPIIPVFFFLLAFVWQAAVSFR 56


>ref|YP_002519777.1| photosystem II protein K [Gnetum parvifolium]
            gi|512721580|ref|YP_008082200.1| photosystem II protein K
            (chloroplast) [Gnetum montanum]
            gi|149941428|dbj|BAF64881.1| photosystem II protein K
            [Gnetum parvifolium] gi|220983520|dbj|BAH11288.1|
            photosystem II protein K (chloroplast) [Gnetum
            parvifolium] gi|490345025|gb|AGL11045.1| photosystem II
            protein K (chloroplast) [Gnetum montanum]
          Length = 56

 Score = 86.3 bits (212), Expect = 3e-14
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = -1

Query: 1213 FFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            F  N FV+ SN   CKLPEAYA+FDP++++MPIIPVFFFLLAFVWQA VSFR
Sbjct: 5    FVTNAFVLWSNFILCKLPEAYASFDPIIDVMPIIPVFFFLLAFVWQAAVSFR 56


>ref|YP_004891756.1| photosystem II protein K (chloroplast) [Picea morrisonicola]
            gi|523420625|ref|YP_008082799.1| photosystem II protein K
            (chloroplast) [Picea abies] gi|307683643|dbj|BAJ19800.1|
            photosystem II protein K [Picea morrisonicola]
            gi|347977537|dbj|BAK86494.1| photosystem II protein K
            (chloroplast) [Picea morrisonicola]
            gi|502524833|emb|CCW23083.1| photosystem II protein K
            (chloroplast) [Picea abies]
          Length = 59

 Score = 81.3 bits (199), Expect = 9e-13
 Identities = 40/59 (67%), Positives = 47/59 (79%)
 Frame = -1

Query: 1234 PVMLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            PVML I F  + F+ S+N+FF KLPEAYA  DP+V++MPIIPV  FLLAFVWQA VSFR
Sbjct: 2    PVMLNI-FLDDAFIYSNNIFFGKLPEAYAISDPIVDVMPIIPVLSFLLAFVWQAAVSFR 59


>gb|ACP52372.1| photosystem II protein K [Pinus parviflora var. pentaphylla]
            gi|356997023|gb|AET44934.1| photosystem II protein K
            (chloroplast) [Pinus amamiana]
            gi|356997310|gb|AET45217.1| photosystem II protein K
            (chloroplast) [Pinus wallichiana]
            gi|357001461|gb|AET49311.1| photosystem II protein K
            (chloroplast) [Pinus dalatensis]
          Length = 59

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 40/59 (67%), Positives = 46/59 (77%)
 Frame = -1

Query: 1234 PVMLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            PVM  I    + F+ S+N FF KLPEAYA FDP+V++MPIIPV FFLLAFVWQA VSFR
Sbjct: 2    PVMFNICL-DDAFIHSNNPFFGKLPEAYAIFDPIVDVMPIIPVLFFLLAFVWQAAVSFR 59


>gb|ACP50751.1| photosystem II protein K [Pinus ponderosa]
            gi|356996733|gb|AET44648.1| photosystem II protein K
            (chloroplast) [Pinus caribaea]
            gi|357001020|gb|AET48876.1| photosystem II protein K
            (chloroplast) [Pinus douglasiana]
            gi|357001242|gb|AET49095.1| photosystem II protein K
            (chloroplast) [Pinus devoniana]
          Length = 59

 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 40/59 (67%), Positives = 46/59 (77%)
 Frame = -1

Query: 1234 PVMLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            PVM  I F  + F+ S+N FF KLPEAYA  DP+V++MPIIPV FFLLAFVWQA VSFR
Sbjct: 2    PVMFNI-FLDDAFIHSNNPFFGKLPEAYAISDPIVDVMPIIPVLFFLLAFVWQAAVSFR 59


>ref|YP_007475596.1| PsbK (chloroplast) [Podocarpus totara] gi|354991413|gb|AER45580.1|
            psbK (chloroplast) [Podocarpus totara]
            gi|449020396|gb|AGE65892.1| PsbK (chloroplast)
            [Podocarpus totara]
          Length = 59

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 38/59 (64%), Positives = 46/59 (77%)
 Frame = -1

Query: 1234 PVMLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            PV+L IL   +  +  +N FF KLPEAYA +DP+VN+MP+IPVFFFLLAF WQA VSFR
Sbjct: 2    PVILNILL-DDAALYLNNPFFAKLPEAYAIYDPIVNVMPVIPVFFFLLAFAWQAAVSFR 59


>ref|YP_004276217.1| photosystem II protein K [Pinus lambertiana]
            gi|228017493|gb|ACP52308.1| photosystem II protein K
            [Pinus monticola] gi|257042517|gb|ACV32791.1| photosystem
            II protein K [Pinus monticola]
            gi|257042546|gb|ACV32819.1| photosystem II protein K
            [Pinus monticola] gi|257042574|gb|ACV32846.1| photosystem
            II protein K [Pinus monticola]
            gi|257042604|gb|ACV32875.1| photosystem II protein K
            [Pinus monticola] gi|257042632|gb|ACV32902.1| photosystem
            II protein K [Pinus monticola]
            gi|257042660|gb|ACV32929.1| photosystem II protein K
            [Pinus monticola] gi|257042689|gb|ACV32957.1| photosystem
            II protein K [Pinus monticola]
            gi|257042717|gb|ACV32984.1| photosystem II protein K
            [Pinus monticola] gi|257042744|gb|ACV33010.1| photosystem
            II protein K [Pinus monticola]
            gi|257042772|gb|ACV33037.1| photosystem II protein K
            [Pinus monticola] gi|323514194|gb|ADX89741.1| photosystem
            II protein K [Pinus lambertiana]
          Length = 59

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 39/59 (66%), Positives = 46/59 (77%)
 Frame = -1

Query: 1234 PVMLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            PVM  I    + F+ S+N FF KLPEAYA FDP+V++MPIIP+ FFLLAFVWQA VSFR
Sbjct: 2    PVMFNICL-DDAFIHSNNPFFGKLPEAYAIFDPIVDVMPIIPLLFFLLAFVWQAAVSFR 59


>gb|AEX95365.1| photosystem II protein K (chloroplast) [Eriospermum cervicorne]
          Length = 61

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = -1

Query: 1204 NTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            N+ + SS+ FF KLPEAYA F+P+V+IMP+IPVFFFLLAFVWQA VSFR
Sbjct: 13   NSTLYSSSFFFAKLPEAYAFFNPIVDIMPVIPVFFFLLAFVWQAAVSFR 61


>ref|YP_004891493.1| photosystem II protein K (chloroplast) [Taiwania cryptomerioides]
            gi|512721795|ref|YP_008082410.1| photosystem II protein K
            (chloroplast) [Taiwania flousiana]
            gi|347977396|dbj|BAK86827.1| photosystem II protein K
            (chloroplast) [Taiwania cryptomerioides]
            gi|490345268|gb|AGL11256.1| photosystem II protein K
            (chloroplast) [Taiwania flousiana]
          Length = 61

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = -1

Query: 1186 SNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            +NLFF KLPEAYA FDP+VN+MPIIP+FFFLLAF WQA VSFR
Sbjct: 19   NNLFFAKLPEAYAIFDPIVNVMPIIPLFFFLLAFAWQAAVSFR 61


>gb|ACP51935.1| photosystem II protein K [Pinus cembra]
          Length = 59

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 39/59 (66%), Positives = 46/59 (77%)
 Frame = -1

Query: 1234 PVMLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            PV+  I    + F+ S+N FF KLPEAYA FDP+V++MPIIPV FFLLAFVWQA VSFR
Sbjct: 2    PVIFNICL-DDAFIHSNNPFFGKLPEAYAIFDPIVDVMPIIPVLFFLLAFVWQAAVSFR 59


>ref|YP_008082318.1| photosystem II protein K (chloroplast) [Pinus taeda]
            gi|228016294|gb|ACP51128.1| photosystem II protein K
            [Pinus taeda] gi|490345171|gb|AGL11164.1| photosystem II
            protein K (chloroplast) [Pinus taeda]
          Length = 59

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 39/59 (66%), Positives = 46/59 (77%)
 Frame = -1

Query: 1234 PVMLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            PVM  I F  + F+ S+N FF KLPEAYA  DP+V++MPIIP+ FFLLAFVWQA VSFR
Sbjct: 2    PVMFNI-FLDDAFIHSNNPFFGKLPEAYAISDPIVDVMPIIPLLFFLLAFVWQAAVSFR 59


>ref|YP_002836073.1| photosystem II protein K [Megaleranthis saniculifolia]
            gi|226933865|gb|ACO91998.1| photosystem II protein K
            [Megaleranthis saniculifolia]
          Length = 61

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 35/54 (64%), Positives = 45/54 (83%)
 Frame = -1

Query: 1219 ILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            I  + N+ + SS+ FF KLPEAYA F+P+V++MP+IP+FFFLLAFVWQA VSFR
Sbjct: 8    ICIYLNSILHSSHFFFAKLPEAYAFFNPIVDVMPVIPLFFFLLAFVWQAAVSFR 61


>ref|YP_004891399.1| photosystem II protein K (chloroplast) [Pseudotsuga sinensis var.
            wilsoniana] gi|307683457|dbj|BAJ19707.1| photosystem II
            protein K [Pseudotsuga sinensis var. wilsoniana]
            gi|347977617|dbj|BAK86572.1| photosystem II protein K
            [Pseudotsuga sinensis var. wilsoniana]
            gi|356998470|gb|AET46361.1| photosystem II protein K
            (chloroplast) [Pseudotsuga menziesii var. menziesii]
          Length = 59

 Score = 78.6 bits (192), Expect = 6e-12
 Identities = 40/59 (67%), Positives = 46/59 (77%)
 Frame = -1

Query: 1234 PVMLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            PVML I F  + F+ S+N FF KLPEAYA  DP+V++MPIIPV  FLLAFVWQA VSFR
Sbjct: 2    PVMLNI-FLDDAFIHSNNPFFGKLPEAYAISDPIVDVMPIIPVLSFLLAFVWQAAVSFR 59


>gb|ABQ02203.1| PsbK [Ptilimnium costatum] gi|146148499|gb|ABQ02211.1| PsbK
            [Ptilimnium nuttallii]
          Length = 61

 Score = 78.6 bits (192), Expect = 6e-12
 Identities = 36/54 (66%), Positives = 45/54 (83%)
 Frame = -1

Query: 1219 ILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            I  + N+ V SS+LFF KLPEAYA  +P+V++MP+IP+FFFLLAFVWQA VSFR
Sbjct: 8    ICIYLNSGVYSSSLFFAKLPEAYAFLNPIVDLMPVIPLFFFLLAFVWQAAVSFR 61


>ref|YP_001531266.1| psbK gene product (chloroplast) [Lolium perenne]
            gi|218176228|ref|YP_002364485.1| photosystem II protein K
            [Festuca arundinacea] gi|427437201|ref|YP_007026708.1|
            photosystem II protein K [Lolium multiflorum]
            gi|158934381|emb|CAO85959.1| photosystem II protein K
            (chloroplast) [Lolium perenne]
            gi|215882312|gb|ACJ70742.1| photosystem II protein K
            [Festuca arundinacea] gi|410178010|gb|AFV62888.1|
            photosystem II protein K [Lolium multiflorum]
          Length = 61

 Score = 78.6 bits (192), Expect = 6e-12
 Identities = 36/56 (64%), Positives = 47/56 (83%)
 Frame = -1

Query: 1225 LTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            LT +FF N+ +  ++ FF KLPEAYA F+P+V++MP+IP+FFFLLAFVWQA VSFR
Sbjct: 7    LTCIFF-NSVLYPTSFFFAKLPEAYAIFNPIVDVMPVIPLFFFLLAFVWQAAVSFR 61


>gb|AFA26752.1| photosystem II protein K, partial [Apostasia wallichii]
          Length = 63

 Score = 78.2 bits (191), Expect = 7e-12
 Identities = 35/44 (79%), Positives = 41/44 (93%)
 Frame = -1

Query: 1189 SSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            SS+LFF KLPEAYA F+P+V++MP+IPVFFFLLAFVWQA VSFR
Sbjct: 20   SSSLFFTKLPEAYAPFNPIVDVMPVIPVFFFLLAFVWQAAVSFR 63


>gb|AER45578.1| psbK (chloroplast) [Halocarpus kirkii]
          Length = 59

 Score = 78.2 bits (191), Expect = 7e-12
 Identities = 38/59 (64%), Positives = 44/59 (74%)
 Frame = -1

Query: 1234 PVMLTILFFQNTFVVSSNLFFCKLPEAYANFDPLVNIMPIIPVFFFLLAFVWQAVVSFR 1058
            PVML I F  N  +  +N FF KLPEAYA  DP+VN+MP+IP+ FFLLAF WQA VSFR
Sbjct: 2    PVMLNI-FLDNAALYLNNPFFAKLPEAYAISDPIVNVMPVIPLLFFLLAFAWQAAVSFR 59