BLASTX nr result

ID: Ephedra27_contig00000693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00000693
         (582 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ19832.1| hypothetical protein PRUPE_ppa013661mg [Prunus pe...   107   2e-21
ref|XP_002991186.1| hypothetical protein SELMODRAFT_133023 [Sela...   105   1e-20
ref|XP_002991249.1| hypothetical protein SELMODRAFT_133189 [Sela...   104   1e-20
gb|ABR17957.1| unknown [Picea sitchensis]                             103   4e-20
gb|ABK23078.1| unknown [Picea sitchensis] gi|116784568|gb|ABK233...   103   4e-20
ref|XP_004973011.1| PREDICTED: 60S acidic ribosomal protein P1-l...   102   6e-20
ref|NP_001060854.1| Os08g0116500 [Oryza sativa Japonica Group] g...   102   9e-20
gb|ABK26870.1| unknown [Picea sitchensis]                             102   9e-20
gb|ABK22229.1| unknown [Picea sitchensis]                             102   9e-20
ref|XP_006659065.1| PREDICTED: 60S acidic ribosomal protein P1-l...   100   4e-19
ref|XP_002279082.1| PREDICTED: 60S acidic ribosomal protein P1-1...    99   6e-19
pdb|3J61|UU Chain u, Localization Of The Large Subunit Ribosomal...    99   1e-18
ref|XP_004306618.1| PREDICTED: 60S acidic ribosomal protein P1-1...    97   3e-18
ref|NP_001149197.1| LOC100282819 [Zea mays] gi|195625376|gb|ACG3...    97   3e-18
gb|ACG30985.1| 60S acidic ribosomal protein P1 [Zea mays] gi|195...    97   3e-18
gb|ACF85707.1| unknown [Zea mays] gi|194708204|gb|ACF88186.1| un...    97   3e-18
gb|EXB78394.1| 60S acidic ribosomal protein P1-1 [Morus notabilis]     96   5e-18
ref|XP_004228719.1| PREDICTED: uncharacterized protein LOC101249...    96   5e-18
ref|XP_004228718.1| PREDICTED: uncharacterized protein LOC101249...    96   5e-18
ref|NP_001275175.1| acidic ribosomal protein P1a-like [Solanum t...    96   5e-18

>gb|EMJ19832.1| hypothetical protein PRUPE_ppa013661mg [Prunus persica]
          Length = 110

 Score =  107 bits (268), Expect = 2e-21
 Identities = 52/64 (81%), Positives = 57/64 (89%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS+SE ACTYAAL+LHDDGIPITAEKI TLVKAANVTVE YWPGL AKL EKR+ EDLIL
Sbjct: 1   MSVSELACTYAALVLHDDGIPITAEKIATLVKAANVTVESYWPGLFAKLAEKRNIEDLIL 60

Query: 265 SCGS 276
           + G+
Sbjct: 61  NVGA 64


>ref|XP_002991186.1| hypothetical protein SELMODRAFT_133023 [Selaginella moellendorffii]
           gi|300141014|gb|EFJ07730.1| hypothetical protein
           SELMODRAFT_133023 [Selaginella moellendorffii]
          Length = 111

 Score =  105 bits (261), Expect = 1e-20
 Identities = 51/64 (79%), Positives = 56/64 (87%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           +++ ETACTYAALILHDDGI ITAEKI TLVKAANV V+ YWP L AKLLEKRS +DLIL
Sbjct: 1   VAMGETACTYAALILHDDGIAITAEKIATLVKAANVKVDSYWPSLFAKLLEKRSVDDLIL 60

Query: 265 SCGS 276
           SCGS
Sbjct: 61  SCGS 64


>ref|XP_002991249.1| hypothetical protein SELMODRAFT_133189 [Selaginella moellendorffii]
           gi|300140960|gb|EFJ07677.1| hypothetical protein
           SELMODRAFT_133189 [Selaginella moellendorffii]
          Length = 110

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/63 (80%), Positives = 55/63 (87%)
 Frame = +1

Query: 88  SISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLILS 267
           ++ ETACTYAALILHDDGI ITAEKI TLVKAANV V+ YWP L AKLLEKRS +DLILS
Sbjct: 1   AMGETACTYAALILHDDGIAITAEKIATLVKAANVKVDSYWPSLFAKLLEKRSVDDLILS 60

Query: 268 CGS 276
           CGS
Sbjct: 61  CGS 63


>gb|ABR17957.1| unknown [Picea sitchensis]
          Length = 113

 Score =  103 bits (256), Expect = 4e-20
 Identities = 49/64 (76%), Positives = 55/64 (85%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS+SE ACTYAAL+LHDD IPITAEKI TLVKAANV +E YWPGL AKL+EKR+ EDLI 
Sbjct: 1   MSVSEVACTYAALVLHDDNIPITAEKISTLVKAANVQIESYWPGLFAKLMEKRNIEDLIS 60

Query: 265 SCGS 276
           + GS
Sbjct: 61  NVGS 64


>gb|ABK23078.1| unknown [Picea sitchensis] gi|116784568|gb|ABK23394.1| unknown
           [Picea sitchensis] gi|224286481|gb|ACN40947.1| unknown
           [Picea sitchensis]
          Length = 112

 Score =  103 bits (256), Expect = 4e-20
 Identities = 50/64 (78%), Positives = 55/64 (85%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS+SE ACTYAALIL DDGIP+T EKI TLVKAANV +E YWPGL AKLLEKR+ EDL+L
Sbjct: 1   MSVSEVACTYAALILWDDGIPVTGEKINTLVKAANVKIESYWPGLFAKLLEKRNIEDLLL 60

Query: 265 SCGS 276
           S GS
Sbjct: 61  SVGS 64


>ref|XP_004973011.1| PREDICTED: 60S acidic ribosomal protein P1-like [Setaria italica]
          Length = 109

 Score =  102 bits (255), Expect = 6e-20
 Identities = 52/64 (81%), Positives = 54/64 (84%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS SE ACTYAALIL DDGIPITAEKI T+VKAAN+ VE YWP L AKLLEKRS EDLIL
Sbjct: 1   MSSSEIACTYAALILSDDGIPITAEKIATIVKAANIKVESYWPALFAKLLEKRSVEDLIL 60

Query: 265 SCGS 276
           S GS
Sbjct: 61  SVGS 64


>ref|NP_001060854.1| Os08g0116500 [Oryza sativa Japonica Group]
           gi|50725625|dbj|BAD33092.1| putative acidic ribosomal
           protein P1a [Oryza sativa Japonica Group]
           gi|113622823|dbj|BAF22768.1| Os08g0116500 [Oryza sativa
           Japonica Group] gi|125559946|gb|EAZ05394.1| hypothetical
           protein OsI_27602 [Oryza sativa Indica Group]
           gi|125601988|gb|EAZ41313.1| hypothetical protein
           OsJ_25823 [Oryza sativa Japonica Group]
           gi|215764941|dbj|BAG86638.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 110

 Score =  102 bits (253), Expect = 9e-20
 Identities = 51/64 (79%), Positives = 54/64 (84%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS SE ACT AALILHDDGIPIT+EKI TLVKAAN+ VE YWPGL AKLLE RS +DLIL
Sbjct: 1   MSSSEVACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLIL 60

Query: 265 SCGS 276
           S GS
Sbjct: 61  SVGS 64


>gb|ABK26870.1| unknown [Picea sitchensis]
          Length = 114

 Score =  102 bits (253), Expect = 9e-20
 Identities = 51/64 (79%), Positives = 54/64 (84%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS+SE ACTYAALIL DD IPIT EKI TLVKAANV +E YWPGL AKLLEKR+ EDLIL
Sbjct: 1   MSVSEVACTYAALILCDDNIPITGEKISTLVKAANVQIESYWPGLFAKLLEKRNIEDLIL 60

Query: 265 SCGS 276
           S GS
Sbjct: 61  SVGS 64


>gb|ABK22229.1| unknown [Picea sitchensis]
          Length = 114

 Score =  102 bits (253), Expect = 9e-20
 Identities = 51/64 (79%), Positives = 54/64 (84%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS+SE ACTYAALIL DD IPIT EKI TLVKAANV +E YWPGL AKLLEKR+ EDLIL
Sbjct: 1   MSVSEVACTYAALILCDDNIPITGEKISTLVKAANVQIESYWPGLFAKLLEKRNIEDLIL 60

Query: 265 SCGS 276
           S GS
Sbjct: 61  SVGS 64


>ref|XP_006659065.1| PREDICTED: 60S acidic ribosomal protein P1-like [Oryza brachyantha]
          Length = 110

 Score =  100 bits (248), Expect = 4e-19
 Identities = 50/64 (78%), Positives = 53/64 (82%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS SE ACT AALILHDDGIPIT+EKI TLVKAAN+ VE YWP L AKLLE RS +DLIL
Sbjct: 1   MSSSEVACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPALFAKLLENRSVDDLIL 60

Query: 265 SCGS 276
           S GS
Sbjct: 61  SVGS 64


>ref|XP_002279082.1| PREDICTED: 60S acidic ribosomal protein P1-1 isoform 1 [Vitis
           vinifera] gi|297742458|emb|CBI34607.3| unnamed protein
           product [Vitis vinifera]
          Length = 111

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 47/64 (73%), Positives = 55/64 (85%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MSI E ACT A LILHDDGIP+TAEKI TL+KAANV+VE YWPGL AKL+EK+S +DLI+
Sbjct: 1   MSIGEQACTLAILILHDDGIPVTAEKISTLLKAANVSVESYWPGLFAKLVEKKSVDDLIM 60

Query: 265 SCGS 276
           + GS
Sbjct: 61  NVGS 64


>pdb|3J61|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
           Ribosome gi|582044921|pdb|3J61|VV Chain v, Localization
           Of The Large Subunit Ribosomal Proteins Into A 5.5 A
           Cryo-em Map Of Triticum Aestivum Translating 80s
           Ribosome gi|57471718|gb|AAW50990.1| ribosomal protein P1
           [Triticum aestivum] gi|473837338|gb|EMS47218.1| 60S
           acidic ribosomal protein P1 [Triticum urartu]
           gi|475518641|gb|EMT06224.1| 60S acidic ribosomal protein
           P1 [Aegilops tauschii]
          Length = 110

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 49/64 (76%), Positives = 53/64 (82%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS SE ACT AALILHDDGIPIT+EKI T+VKAA + VE YWP L AKLLEKRS +DLIL
Sbjct: 1   MSSSEVACTLAALILHDDGIPITSEKIATVVKAAGIKVEAYWPALFAKLLEKRSVDDLIL 60

Query: 265 SCGS 276
           S GS
Sbjct: 61  SVGS 64


>ref|XP_004306618.1| PREDICTED: 60S acidic ribosomal protein P1-1-like [Fragaria vesca
           subsp. vesca]
          Length = 111

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 49/64 (76%), Positives = 52/64 (81%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MSISE ACTYAALILHDDGI IT EKI  LVKAANV+VE YWPGL AKL EKR   DLIL
Sbjct: 1   MSISEIACTYAALILHDDGIAITPEKIAALVKAANVSVESYWPGLFAKLAEKRDIGDLIL 60

Query: 265 SCGS 276
           + G+
Sbjct: 61  NVGA 64


>ref|NP_001149197.1| LOC100282819 [Zea mays] gi|195625376|gb|ACG34518.1| 60S acidic
           ribosomal protein P1 [Zea mays]
          Length = 102

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 49/64 (76%), Positives = 52/64 (81%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           M+  E ACTYAALIL DDGI ITAEKI T+VKAAN+ VE YWP L AKLLEKRS EDLIL
Sbjct: 1   MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRSVEDLIL 60

Query: 265 SCGS 276
           S GS
Sbjct: 61  SVGS 64


>gb|ACG30985.1| 60S acidic ribosomal protein P1 [Zea mays]
           gi|195625300|gb|ACG34480.1| 60S acidic ribosomal protein
           P1 [Zea mays]
          Length = 109

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 49/64 (76%), Positives = 52/64 (81%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           M+  E ACTYAALIL DDGI ITAEKI T+VKAAN+ VE YWP L AKLLEKRS EDLIL
Sbjct: 1   MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRSVEDLIL 60

Query: 265 SCGS 276
           S GS
Sbjct: 61  SVGS 64


>gb|ACF85707.1| unknown [Zea mays] gi|194708204|gb|ACF88186.1| unknown [Zea mays]
           gi|195605294|gb|ACG24477.1| 60S acidic ribosomal protein
           P1 [Zea mays] gi|195606124|gb|ACG24892.1| 60S acidic
           ribosomal protein P1 [Zea mays]
           gi|413921440|gb|AFW61372.1| 60S acidic ribosomal protein
           P1 isoform 1 [Zea mays] gi|413921441|gb|AFW61373.1| 60S
           acidic ribosomal protein P1 isoform 2 [Zea mays]
           gi|413921442|gb|AFW61374.1| 60S acidic ribosomal protein
           P1 isoform 3 [Zea mays]
          Length = 109

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 49/64 (76%), Positives = 52/64 (81%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           M+  E ACTYAALIL DDGI ITAEKI T+VKAAN+ VE YWP L AKLLEKRS EDLIL
Sbjct: 1   MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRSVEDLIL 60

Query: 265 SCGS 276
           S GS
Sbjct: 61  SVGS 64


>gb|EXB78394.1| 60S acidic ribosomal protein P1-1 [Morus notabilis]
          Length = 111

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 46/64 (71%), Positives = 54/64 (84%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS SE ACTYAALILHDDGIPITA+KI T+VK+A ++VE YWP L AKL EKR+ +DLIL
Sbjct: 1   MSTSELACTYAALILHDDGIPITADKIATVVKSAKLSVESYWPSLFAKLAEKRNLDDLIL 60

Query: 265 SCGS 276
           + GS
Sbjct: 61  NAGS 64


>ref|XP_004228719.1| PREDICTED: uncharacterized protein LOC101249479 isoform 2 [Solanum
           lycopersicum]
          Length = 146

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 47/64 (73%), Positives = 53/64 (82%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS  E ACTYAAL+LHD+ IPITAEKI TLVKAANVTVEPYWP L AKL EKR+  DLI+
Sbjct: 1   MSCGEVACTYAALLLHDEDIPITAEKISTLVKAANVTVEPYWPLLFAKLAEKRNLGDLIM 60

Query: 265 SCGS 276
           + G+
Sbjct: 61  NVGA 64


>ref|XP_004228718.1| PREDICTED: uncharacterized protein LOC101249479 isoform 1 [Solanum
           lycopersicum]
          Length = 202

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 47/64 (73%), Positives = 53/64 (82%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS  E ACTYAAL+LHD+ IPITAEKI TLVKAANVTVEPYWP L AKL EKR+  DLI+
Sbjct: 1   MSCGEVACTYAALLLHDEDIPITAEKISTLVKAANVTVEPYWPLLFAKLAEKRNLGDLIM 60

Query: 265 SCGS 276
           + G+
Sbjct: 61  NVGA 64


>ref|NP_001275175.1| acidic ribosomal protein P1a-like [Solanum tuberosum]
           gi|78191426|gb|ABB29934.1| acidic ribosomal protein
           P1a-like [Solanum tuberosum]
          Length = 112

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 47/64 (73%), Positives = 53/64 (82%)
 Frame = +1

Query: 85  MSISETACTYAALILHDDGIPITAEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEDLIL 264
           MS  E ACTYAAL+LHD+ IPITAEKI TLVKAANVTVEPYWP L AKL EKR+  DLI+
Sbjct: 1   MSYGEVACTYAALLLHDEDIPITAEKISTLVKAANVTVEPYWPLLFAKLAEKRNLGDLIM 60

Query: 265 SCGS 276
           + G+
Sbjct: 61  NVGA 64


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