BLASTX nr result

ID: Ephedra27_contig00000605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00000605
         (509 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006659431.1| PREDICTED: chlorophyll a-b binding protein P...   108   7e-22
gb|ABV44672.1| photosystem I light-harvesting complex type 4 pro...   107   2e-21
gb|AAC67557.1| chlorophyll a/b-binding protein presursor [Oryza ...   107   2e-21
gb|EAZ07102.1| hypothetical protein OsI_29351 [Oryza sativa Indi...   107   2e-21
gb|EAZ07099.1| hypothetical protein OsI_29348 [Oryza sativa Indi...   107   2e-21
gb|AAR19267.2| chlorophyll a/b binding protein presusor [Oryza s...   106   3e-21
ref|NP_001061884.1| Os08g0435900 [Oryza sativa Japonica Group] g...   106   3e-21
emb|CAA78932.1| Lhca4 protein,Type 4 protein of light-harvesting...   106   3e-21
emb|CAA78901.1| Lhca4 protein,Type 4 protein of light-harvesting...   106   3e-21
gb|AFW62280.1| hypothetical protein ZEAMMB73_290736 [Zea mays]        106   4e-21
gb|AFW62279.1| hypothetical protein ZEAMMB73_290736 [Zea mays]        106   4e-21
gb|AFW62278.1| chlorophyll a-b binding protein 4 [Zea mays]           106   4e-21
gb|ACG30344.1| chlorophyll a-b binding protein 4 [Zea mays]           105   5e-21
gb|ABK24236.1| unknown [Picea sitchensis] gi|116790888|gb|ABK257...   105   5e-21
ref|XP_006440616.1| hypothetical protein CICLE_v10021861mg [Citr...   105   6e-21
ref|XP_003574529.1| PREDICTED: chlorophyll a-b binding protein 4...   105   8e-21
gb|ACN40598.1| unknown [Picea sitchensis]                             104   1e-20
ref|XP_003523016.2| PREDICTED: chlorophyll a-b binding protein P...   104   1e-20
emb|CAC84491.1| putative chlorophyll a/b-binding protein type 4 ...   103   2e-20
ref|XP_003527087.2| PREDICTED: chlorophyll a-b binding protein P...   103   2e-20

>ref|XP_006659431.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
           [Oryza brachyantha]
          Length = 246

 Score =  108 bits (270), Expect = 7e-22
 Identities = 56/103 (54%), Positives = 71/103 (68%)
 Frame = +1

Query: 199 MATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLPGL 378
           MA+  + A  + +   A    S+F G+ +T   RA+   R+      VRV+AKGEWLPGL
Sbjct: 1   MASVTARAPVAALRPSAASLKSSFLGQPSTRLGRASTTARRN-----VRVEAKGEWLPGL 55

Query: 379 QSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
            SP +L+G+LPGDNGFDPL L E PE+LRW+VQAELVNGRWAM
Sbjct: 56  PSPVYLDGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM 98


>gb|ABV44672.1| photosystem I light-harvesting complex type 4 protein [Bambusa
           oldhamii]
          Length = 244

 Score =  107 bits (267), Expect = 2e-21
 Identities = 49/70 (70%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
 Frame = +1

Query: 301 ANEVGRKGSSSAK-VRVQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQ 477
           ++ +GR  SS+ + +RV+AKGEWLPGL SP +LNG+LPGDNGFDPL L E PE+LRWYVQ
Sbjct: 27  SSRLGRASSSTRRSLRVEAKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQ 86

Query: 478 AELVNGRWAM 507
           AELVN RWAM
Sbjct: 87  AELVNARWAM 96


>gb|AAC67557.1| chlorophyll a/b-binding protein presursor [Oryza sativa Japonica
           Group]
          Length = 244

 Score =  107 bits (266), Expect = 2e-21
 Identities = 58/107 (54%), Positives = 68/107 (63%)
 Frame = +1

Query: 187 AKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEW 366
           A+  +A  +SSA             STF G+ +T   RA    R       VR +AKGEW
Sbjct: 6   ARTPVAALLSSASLK----------STFLGQSSTRLARAPTTRRN------VRAEAKGEW 49

Query: 367 LPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
           LPGL SP +LNG+LPGDNGFDPL L E PE+LRW+VQAELVNGRWAM
Sbjct: 50  LPGLPSPTYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM 96


>gb|EAZ07102.1| hypothetical protein OsI_29351 [Oryza sativa Indica Group]
          Length = 244

 Score =  107 bits (266), Expect = 2e-21
 Identities = 57/103 (55%), Positives = 69/103 (66%)
 Frame = +1

Query: 199 MATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLPGL 378
           MA+  + A  + +   A +  STF G+ +T   RA    R       VR +AKGEWLPGL
Sbjct: 1   MASVTARAPVAALRPSASLK-STFLGQSSTRLARAPTTRRN------VRAEAKGEWLPGL 53

Query: 379 QSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
            SP +LNG+LPGDNGFDPL L E PE+LRW+VQAELVNGRWAM
Sbjct: 54  PSPTYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM 96


>gb|EAZ07099.1| hypothetical protein OsI_29348 [Oryza sativa Indica Group]
          Length = 244

 Score =  107 bits (266), Expect = 2e-21
 Identities = 57/103 (55%), Positives = 69/103 (66%)
 Frame = +1

Query: 199 MATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLPGL 378
           MA+  + A  + +   A +  STF G+ +T   RA    R       VR +AKGEWLPGL
Sbjct: 1   MASVTARAPVAALRPSASLK-STFLGQSSTRLARAPTTRRN------VRAEAKGEWLPGL 53

Query: 379 QSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
            SP +LNG+LPGDNGFDPL L E PE+LRW+VQAELVNGRWAM
Sbjct: 54  PSPTYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM 96


>gb|AAR19267.2| chlorophyll a/b binding protein presusor [Oryza sativa Japonica
           Group]
          Length = 244

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/82 (64%), Positives = 60/82 (73%)
 Frame = +1

Query: 262 STFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSL 441
           STF G+ +T   RA    R       VR +AKGEWLPGL SP +LNG+LPGDNGFDPL L
Sbjct: 21  STFLGQSSTRLARAPTTRRN------VRAEAKGEWLPGLPSPTYLNGSLPGDNGFDPLGL 74

Query: 442 GEKPESLRWYVQAELVNGRWAM 507
            E PE+LRW+VQAELVNGRWAM
Sbjct: 75  AEDPENLRWFVQAELVNGRWAM 96


>ref|NP_001061884.1| Os08g0435900 [Oryza sativa Japonica Group]
           gi|42407519|dbj|BAD10636.1| putative chlorophyll
           a/b-binding protein precursor [Oryza sativa Japonica
           Group] gi|113623853|dbj|BAF23798.1| Os08g0435900 [Oryza
           sativa Japonica Group] gi|125603526|gb|EAZ42851.1|
           hypothetical protein OsJ_27444 [Oryza sativa Japonica
           Group] gi|215695363|dbj|BAG90554.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215737533|dbj|BAG96663.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737603|dbj|BAG96733.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765675|dbj|BAG87372.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 244

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/82 (64%), Positives = 60/82 (73%)
 Frame = +1

Query: 262 STFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSL 441
           STF G+ +T   RA    R       VR +AKGEWLPGL SP +LNG+LPGDNGFDPL L
Sbjct: 21  STFLGQSSTRLARAPTTRRN------VRAEAKGEWLPGLPSPTYLNGSLPGDNGFDPLGL 74

Query: 442 GEKPESLRWYVQAELVNGRWAM 507
            E PE+LRW+VQAELVNGRWAM
Sbjct: 75  AEDPENLRWFVQAELVNGRWAM 96


>emb|CAA78932.1| Lhca4 protein,Type 4 protein of light-harvesting complex of
           photosystem I [Pinus sylvestris]
          Length = 251

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/67 (74%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
 Frame = +1

Query: 316 RKGSSSAKVR---VQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAEL 486
           R GS+ A  R   V+AKGEWLPGL SP +LNG+LPGDNGFDPL L E PESL+WYVQAEL
Sbjct: 36  RPGSNPAPARSFKVEAKGEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQAEL 95

Query: 487 VNGRWAM 507
           VNGRWAM
Sbjct: 96  VNGRWAM 102


>emb|CAA78901.1| Lhca4 protein,Type 4 protein of light-harvesting complex of
           photosystem I [Pinus sylvestris]
          Length = 244

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/67 (74%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
 Frame = +1

Query: 316 RKGSSSAKVR---VQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAEL 486
           R GS+ A  R   V+AKGEWLPGL SP +LNG+LPGDNGFDPL L E PESL+WYVQAEL
Sbjct: 29  RPGSNPAPARSFKVEAKGEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQAEL 88

Query: 487 VNGRWAM 507
           VNGRWAM
Sbjct: 89  VNGRWAM 95


>gb|AFW62280.1| hypothetical protein ZEAMMB73_290736 [Zea mays]
          Length = 224

 Score =  106 bits (264), Expect = 4e-21
 Identities = 54/107 (50%), Positives = 70/107 (65%)
 Frame = +1

Query: 187 AKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEW 366
           A+A +A    S+ ++ +G     H+S  G   T +P R +           ++ +AKGEW
Sbjct: 6   ARAPVAALRPSSSSAFLG-----HSSRLGRTATASPTRRS-----------LKAEAKGEW 49

Query: 367 LPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
           LPGL SP +L+G+LPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 50  LPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 96


>gb|AFW62279.1| hypothetical protein ZEAMMB73_290736 [Zea mays]
          Length = 242

 Score =  106 bits (264), Expect = 4e-21
 Identities = 54/107 (50%), Positives = 70/107 (65%)
 Frame = +1

Query: 187 AKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEW 366
           A+A +A    S+ ++ +G     H+S  G   T +P R +           ++ +AKGEW
Sbjct: 6   ARAPVAALRPSSSSAFLG-----HSSRLGRTATASPTRRS-----------LKAEAKGEW 49

Query: 367 LPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
           LPGL SP +L+G+LPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 50  LPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 96


>gb|AFW62278.1| chlorophyll a-b binding protein 4 [Zea mays]
          Length = 244

 Score =  106 bits (264), Expect = 4e-21
 Identities = 54/107 (50%), Positives = 70/107 (65%)
 Frame = +1

Query: 187 AKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEW 366
           A+A +A    S+ ++ +G     H+S  G   T +P R +           ++ +AKGEW
Sbjct: 6   ARAPVAALRPSSSSAFLG-----HSSRLGRTATASPTRRS-----------LKAEAKGEW 49

Query: 367 LPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
           LPGL SP +L+G+LPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 50  LPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 96


>gb|ACG30344.1| chlorophyll a-b binding protein 4 [Zea mays]
          Length = 252

 Score =  105 bits (263), Expect = 5e-21
 Identities = 57/108 (52%), Positives = 71/108 (65%)
 Frame = +1

Query: 184 RAKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGE 363
           R  AS+ +  SSA A+ +G     H+S  G   T +P R +           ++ +AKGE
Sbjct: 14  RPSASLKSSSSSA-AAFLG-----HSSRLGRTATASPTRRS-----------LKAEAKGE 56

Query: 364 WLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
           WLPGL SP +L+G+LPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 57  WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 104


>gb|ABK24236.1| unknown [Picea sitchensis] gi|116790888|gb|ABK25778.1| unknown
           [Picea sitchensis] gi|224285609|gb|ACN40523.1| unknown
           [Picea sitchensis]
          Length = 251

 Score =  105 bits (263), Expect = 5e-21
 Identities = 50/67 (74%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
 Frame = +1

Query: 316 RKGSSSAKVR---VQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAEL 486
           R GS+ A  R   V+AKGEWLPGL SP +LNG+LPGDNGFDPL L E PESL+WYVQAEL
Sbjct: 36  RPGSNPAPARSFKVEAKGEWLPGLSSPTYLNGSLPGDNGFDPLGLAEDPESLKWYVQAEL 95

Query: 487 VNGRWAM 507
           VNGRWAM
Sbjct: 96  VNGRWAM 102


>ref|XP_006440616.1| hypothetical protein CICLE_v10021861mg [Citrus clementina]
           gi|557542878|gb|ESR53856.1| hypothetical protein
           CICLE_v10021861mg [Citrus clementina]
          Length = 249

 Score =  105 bits (262), Expect = 6e-21
 Identities = 47/61 (77%), Positives = 53/61 (86%)
 Frame = +1

Query: 325 SSSAKVRVQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWA 504
           SSSA  +V+AKGEWLPGL SP +LNG+LPGDNGFDPL L E PE+L+WYVQAELVN RWA
Sbjct: 40  SSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWA 99

Query: 505 M 507
           M
Sbjct: 100 M 100


>ref|XP_003574529.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
           [Brachypodium distachyon]
          Length = 244

 Score =  105 bits (261), Expect = 8e-21
 Identities = 53/104 (50%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = +1

Query: 199 MATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAK-VRVQAKGEWLPG 375
           MA+  + A  + +   A +++   G         ++ +G   S+S + +RV+AKGEWLPG
Sbjct: 1   MASITARAPVAALRPSASLNSGFLG--------HSSRLGLASSTSRRSLRVEAKGEWLPG 52

Query: 376 LQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
           L SP +L+G LPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 53  LPSPAYLDGKLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 96


>gb|ACN40598.1| unknown [Picea sitchensis]
          Length = 251

 Score =  104 bits (260), Expect = 1e-20
 Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
 Frame = +1

Query: 316 RKGSSSAKVR---VQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAEL 486
           R GS+ A  R   V+AKGEWLPGL SP +LNG+LPGDNGFDPL L E P+SL+WYVQAEL
Sbjct: 36  RPGSNPAPARSFKVEAKGEWLPGLSSPTYLNGSLPGDNGFDPLGLAEDPDSLKWYVQAEL 95

Query: 487 VNGRWAM 507
           VNGRWAM
Sbjct: 96  VNGRWAM 102


>ref|XP_003523016.2| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic
           [Glycine max]
          Length = 291

 Score =  104 bits (259), Expect = 1e-20
 Identities = 58/107 (54%), Positives = 69/107 (64%)
 Frame = +1

Query: 187 AKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEW 366
           A A++ T  S+A       K++  T + G        R   +G   S+S KV  + KGEW
Sbjct: 39  AMATVTTQASAAIFRPCTSKSRFLTGSSGKLNREVTMRP--MGCPPSASFKVEAK-KGEW 95

Query: 367 LPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
           LPGL SP +LNGTLPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 96  LPGLASPTYLNGTLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 142


>emb|CAC84491.1| putative chlorophyll a/b-binding protein type 4 [Pinus pinaster]
          Length = 251

 Score =  103 bits (258), Expect = 2e-20
 Identities = 49/67 (73%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
 Frame = +1

Query: 316 RKGSSSAKVR---VQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAEL 486
           R GS+ A  R   V+AKGEWLPGL SP +LNG+LPGDNG DPL L E PESL+WYVQAEL
Sbjct: 36  RPGSNPAPARSFKVEAKGEWLPGLSSPSYLNGSLPGDNGXDPLGLAEDPESLKWYVQAEL 95

Query: 487 VNGRWAM 507
           VNGRWAM
Sbjct: 96  VNGRWAM 102


>ref|XP_003527087.2| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic
           [Glycine max]
          Length = 292

 Score =  103 bits (258), Expect = 2e-20
 Identities = 57/105 (54%), Positives = 68/105 (64%)
 Frame = +1

Query: 193 ASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLP 372
           A++ T  S+A       K++  T + G        R   +G   S+S KV  + KGEWLP
Sbjct: 42  ATVTTQASAAIFRPCASKSRFLTGSSGKLNREVTMRP--MGCPPSASFKVEAK-KGEWLP 98

Query: 373 GLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
           GL SP +LNGTLPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 99  GLASPTYLNGTLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 143


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