BLASTX nr result
ID: Ephedra27_contig00000605
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00000605
(509 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006659431.1| PREDICTED: chlorophyll a-b binding protein P... 108 7e-22
gb|ABV44672.1| photosystem I light-harvesting complex type 4 pro... 107 2e-21
gb|AAC67557.1| chlorophyll a/b-binding protein presursor [Oryza ... 107 2e-21
gb|EAZ07102.1| hypothetical protein OsI_29351 [Oryza sativa Indi... 107 2e-21
gb|EAZ07099.1| hypothetical protein OsI_29348 [Oryza sativa Indi... 107 2e-21
gb|AAR19267.2| chlorophyll a/b binding protein presusor [Oryza s... 106 3e-21
ref|NP_001061884.1| Os08g0435900 [Oryza sativa Japonica Group] g... 106 3e-21
emb|CAA78932.1| Lhca4 protein,Type 4 protein of light-harvesting... 106 3e-21
emb|CAA78901.1| Lhca4 protein,Type 4 protein of light-harvesting... 106 3e-21
gb|AFW62280.1| hypothetical protein ZEAMMB73_290736 [Zea mays] 106 4e-21
gb|AFW62279.1| hypothetical protein ZEAMMB73_290736 [Zea mays] 106 4e-21
gb|AFW62278.1| chlorophyll a-b binding protein 4 [Zea mays] 106 4e-21
gb|ACG30344.1| chlorophyll a-b binding protein 4 [Zea mays] 105 5e-21
gb|ABK24236.1| unknown [Picea sitchensis] gi|116790888|gb|ABK257... 105 5e-21
ref|XP_006440616.1| hypothetical protein CICLE_v10021861mg [Citr... 105 6e-21
ref|XP_003574529.1| PREDICTED: chlorophyll a-b binding protein 4... 105 8e-21
gb|ACN40598.1| unknown [Picea sitchensis] 104 1e-20
ref|XP_003523016.2| PREDICTED: chlorophyll a-b binding protein P... 104 1e-20
emb|CAC84491.1| putative chlorophyll a/b-binding protein type 4 ... 103 2e-20
ref|XP_003527087.2| PREDICTED: chlorophyll a-b binding protein P... 103 2e-20
>ref|XP_006659431.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
[Oryza brachyantha]
Length = 246
Score = 108 bits (270), Expect = 7e-22
Identities = 56/103 (54%), Positives = 71/103 (68%)
Frame = +1
Query: 199 MATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLPGL 378
MA+ + A + + A S+F G+ +T RA+ R+ VRV+AKGEWLPGL
Sbjct: 1 MASVTARAPVAALRPSAASLKSSFLGQPSTRLGRASTTARRN-----VRVEAKGEWLPGL 55
Query: 379 QSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
SP +L+G+LPGDNGFDPL L E PE+LRW+VQAELVNGRWAM
Sbjct: 56 PSPVYLDGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM 98
>gb|ABV44672.1| photosystem I light-harvesting complex type 4 protein [Bambusa
oldhamii]
Length = 244
Score = 107 bits (267), Expect = 2e-21
Identities = 49/70 (70%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Frame = +1
Query: 301 ANEVGRKGSSSAK-VRVQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQ 477
++ +GR SS+ + +RV+AKGEWLPGL SP +LNG+LPGDNGFDPL L E PE+LRWYVQ
Sbjct: 27 SSRLGRASSSTRRSLRVEAKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQ 86
Query: 478 AELVNGRWAM 507
AELVN RWAM
Sbjct: 87 AELVNARWAM 96
>gb|AAC67557.1| chlorophyll a/b-binding protein presursor [Oryza sativa Japonica
Group]
Length = 244
Score = 107 bits (266), Expect = 2e-21
Identities = 58/107 (54%), Positives = 68/107 (63%)
Frame = +1
Query: 187 AKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEW 366
A+ +A +SSA STF G+ +T RA R VR +AKGEW
Sbjct: 6 ARTPVAALLSSASLK----------STFLGQSSTRLARAPTTRRN------VRAEAKGEW 49
Query: 367 LPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
LPGL SP +LNG+LPGDNGFDPL L E PE+LRW+VQAELVNGRWAM
Sbjct: 50 LPGLPSPTYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM 96
>gb|EAZ07102.1| hypothetical protein OsI_29351 [Oryza sativa Indica Group]
Length = 244
Score = 107 bits (266), Expect = 2e-21
Identities = 57/103 (55%), Positives = 69/103 (66%)
Frame = +1
Query: 199 MATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLPGL 378
MA+ + A + + A + STF G+ +T RA R VR +AKGEWLPGL
Sbjct: 1 MASVTARAPVAALRPSASLK-STFLGQSSTRLARAPTTRRN------VRAEAKGEWLPGL 53
Query: 379 QSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
SP +LNG+LPGDNGFDPL L E PE+LRW+VQAELVNGRWAM
Sbjct: 54 PSPTYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM 96
>gb|EAZ07099.1| hypothetical protein OsI_29348 [Oryza sativa Indica Group]
Length = 244
Score = 107 bits (266), Expect = 2e-21
Identities = 57/103 (55%), Positives = 69/103 (66%)
Frame = +1
Query: 199 MATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLPGL 378
MA+ + A + + A + STF G+ +T RA R VR +AKGEWLPGL
Sbjct: 1 MASVTARAPVAALRPSASLK-STFLGQSSTRLARAPTTRRN------VRAEAKGEWLPGL 53
Query: 379 QSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
SP +LNG+LPGDNGFDPL L E PE+LRW+VQAELVNGRWAM
Sbjct: 54 PSPTYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM 96
>gb|AAR19267.2| chlorophyll a/b binding protein presusor [Oryza sativa Japonica
Group]
Length = 244
Score = 106 bits (265), Expect = 3e-21
Identities = 53/82 (64%), Positives = 60/82 (73%)
Frame = +1
Query: 262 STFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSL 441
STF G+ +T RA R VR +AKGEWLPGL SP +LNG+LPGDNGFDPL L
Sbjct: 21 STFLGQSSTRLARAPTTRRN------VRAEAKGEWLPGLPSPTYLNGSLPGDNGFDPLGL 74
Query: 442 GEKPESLRWYVQAELVNGRWAM 507
E PE+LRW+VQAELVNGRWAM
Sbjct: 75 AEDPENLRWFVQAELVNGRWAM 96
>ref|NP_001061884.1| Os08g0435900 [Oryza sativa Japonica Group]
gi|42407519|dbj|BAD10636.1| putative chlorophyll
a/b-binding protein precursor [Oryza sativa Japonica
Group] gi|113623853|dbj|BAF23798.1| Os08g0435900 [Oryza
sativa Japonica Group] gi|125603526|gb|EAZ42851.1|
hypothetical protein OsJ_27444 [Oryza sativa Japonica
Group] gi|215695363|dbj|BAG90554.1| unnamed protein
product [Oryza sativa Japonica Group]
gi|215737533|dbj|BAG96663.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737603|dbj|BAG96733.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215765675|dbj|BAG87372.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 244
Score = 106 bits (265), Expect = 3e-21
Identities = 53/82 (64%), Positives = 60/82 (73%)
Frame = +1
Query: 262 STFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSL 441
STF G+ +T RA R VR +AKGEWLPGL SP +LNG+LPGDNGFDPL L
Sbjct: 21 STFLGQSSTRLARAPTTRRN------VRAEAKGEWLPGLPSPTYLNGSLPGDNGFDPLGL 74
Query: 442 GEKPESLRWYVQAELVNGRWAM 507
E PE+LRW+VQAELVNGRWAM
Sbjct: 75 AEDPENLRWFVQAELVNGRWAM 96
>emb|CAA78932.1| Lhca4 protein,Type 4 protein of light-harvesting complex of
photosystem I [Pinus sylvestris]
Length = 251
Score = 106 bits (265), Expect = 3e-21
Identities = 50/67 (74%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
Frame = +1
Query: 316 RKGSSSAKVR---VQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAEL 486
R GS+ A R V+AKGEWLPGL SP +LNG+LPGDNGFDPL L E PESL+WYVQAEL
Sbjct: 36 RPGSNPAPARSFKVEAKGEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQAEL 95
Query: 487 VNGRWAM 507
VNGRWAM
Sbjct: 96 VNGRWAM 102
>emb|CAA78901.1| Lhca4 protein,Type 4 protein of light-harvesting complex of
photosystem I [Pinus sylvestris]
Length = 244
Score = 106 bits (265), Expect = 3e-21
Identities = 50/67 (74%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
Frame = +1
Query: 316 RKGSSSAKVR---VQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAEL 486
R GS+ A R V+AKGEWLPGL SP +LNG+LPGDNGFDPL L E PESL+WYVQAEL
Sbjct: 29 RPGSNPAPARSFKVEAKGEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQAEL 88
Query: 487 VNGRWAM 507
VNGRWAM
Sbjct: 89 VNGRWAM 95
>gb|AFW62280.1| hypothetical protein ZEAMMB73_290736 [Zea mays]
Length = 224
Score = 106 bits (264), Expect = 4e-21
Identities = 54/107 (50%), Positives = 70/107 (65%)
Frame = +1
Query: 187 AKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEW 366
A+A +A S+ ++ +G H+S G T +P R + ++ +AKGEW
Sbjct: 6 ARAPVAALRPSSSSAFLG-----HSSRLGRTATASPTRRS-----------LKAEAKGEW 49
Query: 367 LPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
LPGL SP +L+G+LPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 50 LPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 96
>gb|AFW62279.1| hypothetical protein ZEAMMB73_290736 [Zea mays]
Length = 242
Score = 106 bits (264), Expect = 4e-21
Identities = 54/107 (50%), Positives = 70/107 (65%)
Frame = +1
Query: 187 AKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEW 366
A+A +A S+ ++ +G H+S G T +P R + ++ +AKGEW
Sbjct: 6 ARAPVAALRPSSSSAFLG-----HSSRLGRTATASPTRRS-----------LKAEAKGEW 49
Query: 367 LPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
LPGL SP +L+G+LPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 50 LPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 96
>gb|AFW62278.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 244
Score = 106 bits (264), Expect = 4e-21
Identities = 54/107 (50%), Positives = 70/107 (65%)
Frame = +1
Query: 187 AKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEW 366
A+A +A S+ ++ +G H+S G T +P R + ++ +AKGEW
Sbjct: 6 ARAPVAALRPSSSSAFLG-----HSSRLGRTATASPTRRS-----------LKAEAKGEW 49
Query: 367 LPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
LPGL SP +L+G+LPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 50 LPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 96
>gb|ACG30344.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 252
Score = 105 bits (263), Expect = 5e-21
Identities = 57/108 (52%), Positives = 71/108 (65%)
Frame = +1
Query: 184 RAKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGE 363
R AS+ + SSA A+ +G H+S G T +P R + ++ +AKGE
Sbjct: 14 RPSASLKSSSSSA-AAFLG-----HSSRLGRTATASPTRRS-----------LKAEAKGE 56
Query: 364 WLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
WLPGL SP +L+G+LPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 57 WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 104
>gb|ABK24236.1| unknown [Picea sitchensis] gi|116790888|gb|ABK25778.1| unknown
[Picea sitchensis] gi|224285609|gb|ACN40523.1| unknown
[Picea sitchensis]
Length = 251
Score = 105 bits (263), Expect = 5e-21
Identities = 50/67 (74%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
Frame = +1
Query: 316 RKGSSSAKVR---VQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAEL 486
R GS+ A R V+AKGEWLPGL SP +LNG+LPGDNGFDPL L E PESL+WYVQAEL
Sbjct: 36 RPGSNPAPARSFKVEAKGEWLPGLSSPTYLNGSLPGDNGFDPLGLAEDPESLKWYVQAEL 95
Query: 487 VNGRWAM 507
VNGRWAM
Sbjct: 96 VNGRWAM 102
>ref|XP_006440616.1| hypothetical protein CICLE_v10021861mg [Citrus clementina]
gi|557542878|gb|ESR53856.1| hypothetical protein
CICLE_v10021861mg [Citrus clementina]
Length = 249
Score = 105 bits (262), Expect = 6e-21
Identities = 47/61 (77%), Positives = 53/61 (86%)
Frame = +1
Query: 325 SSSAKVRVQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWA 504
SSSA +V+AKGEWLPGL SP +LNG+LPGDNGFDPL L E PE+L+WYVQAELVN RWA
Sbjct: 40 SSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWA 99
Query: 505 M 507
M
Sbjct: 100 M 100
>ref|XP_003574529.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 105 bits (261), Expect = 8e-21
Identities = 53/104 (50%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Frame = +1
Query: 199 MATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAK-VRVQAKGEWLPG 375
MA+ + A + + A +++ G ++ +G S+S + +RV+AKGEWLPG
Sbjct: 1 MASITARAPVAALRPSASLNSGFLG--------HSSRLGLASSTSRRSLRVEAKGEWLPG 52
Query: 376 LQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
L SP +L+G LPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 53 LPSPAYLDGKLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 96
>gb|ACN40598.1| unknown [Picea sitchensis]
Length = 251
Score = 104 bits (260), Expect = 1e-20
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
Frame = +1
Query: 316 RKGSSSAKVR---VQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAEL 486
R GS+ A R V+AKGEWLPGL SP +LNG+LPGDNGFDPL L E P+SL+WYVQAEL
Sbjct: 36 RPGSNPAPARSFKVEAKGEWLPGLSSPTYLNGSLPGDNGFDPLGLAEDPDSLKWYVQAEL 95
Query: 487 VNGRWAM 507
VNGRWAM
Sbjct: 96 VNGRWAM 102
>ref|XP_003523016.2| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic
[Glycine max]
Length = 291
Score = 104 bits (259), Expect = 1e-20
Identities = 58/107 (54%), Positives = 69/107 (64%)
Frame = +1
Query: 187 AKASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEW 366
A A++ T S+A K++ T + G R +G S+S KV + KGEW
Sbjct: 39 AMATVTTQASAAIFRPCTSKSRFLTGSSGKLNREVTMRP--MGCPPSASFKVEAK-KGEW 95
Query: 367 LPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
LPGL SP +LNGTLPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 96 LPGLASPTYLNGTLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 142
>emb|CAC84491.1| putative chlorophyll a/b-binding protein type 4 [Pinus pinaster]
Length = 251
Score = 103 bits (258), Expect = 2e-20
Identities = 49/67 (73%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Frame = +1
Query: 316 RKGSSSAKVR---VQAKGEWLPGLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAEL 486
R GS+ A R V+AKGEWLPGL SP +LNG+LPGDNG DPL L E PESL+WYVQAEL
Sbjct: 36 RPGSNPAPARSFKVEAKGEWLPGLSSPSYLNGSLPGDNGXDPLGLAEDPESLKWYVQAEL 95
Query: 487 VNGRWAM 507
VNGRWAM
Sbjct: 96 VNGRWAM 102
>ref|XP_003527087.2| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic
[Glycine max]
Length = 292
Score = 103 bits (258), Expect = 2e-20
Identities = 57/105 (54%), Positives = 68/105 (64%)
Frame = +1
Query: 193 ASMATFISSARASTVGVKAQIHTSTFGGRRTTTPQRANEVGRKGSSSAKVRVQAKGEWLP 372
A++ T S+A K++ T + G R +G S+S KV + KGEWLP
Sbjct: 42 ATVTTQASAAIFRPCASKSRFLTGSSGKLNREVTMRP--MGCPPSASFKVEAK-KGEWLP 98
Query: 373 GLQSPGHLNGTLPGDNGFDPLSLGEKPESLRWYVQAELVNGRWAM 507
GL SP +LNGTLPGDNGFDPL L E PE+LRWYVQAELVNGRWAM
Sbjct: 99 GLASPTYLNGTLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM 143