BLASTX nr result
ID: Ephedra27_contig00000414
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00000414
(380 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001105708.1| 40S ribosomal protein S13 [Zea mays] gi|4647... 95 1e-17
ref|XP_006659769.1| PREDICTED: 40S ribosomal protein S13-2-like,... 95 1e-17
ref|XP_004973004.1| PREDICTED: 40S ribosomal protein S13-like [S... 95 1e-17
ref|XP_004973003.1| PREDICTED: 40S ribosomal protein S13-like [S... 95 1e-17
gb|AAU82114.1| cytoplasmatic ribosomal protein S13 [Triticum aes... 95 1e-17
pdb|1YSH|E Chain E, Localization And Dynamic Behavior Of Ribosom... 95 1e-17
ref|NP_001060861.1| Os08g0117300 [Oryza sativa Japonica Group] g... 95 1e-17
ref|XP_003573309.1| PREDICTED: 40S ribosomal protein S13-1-like ... 95 1e-17
ref|XP_003573306.1| PREDICTED: 40S ribosomal protein S13-like [B... 95 1e-17
dbj|BAJ86822.1| predicted protein [Hordeum vulgare subsp. vulgare] 95 1e-17
dbj|BAJ94727.1| predicted protein [Hordeum vulgare subsp. vulgare] 95 1e-17
ref|XP_002969362.1| hypothetical protein SELMODRAFT_440805 [Sela... 95 1e-17
ref|XP_002444935.1| hypothetical protein SORBIDRAFT_07g001670 [S... 95 1e-17
gb|AFW61363.1| hypothetical protein ZEAMMB73_870097 [Zea mays] g... 95 1e-17
gb|ACN31452.1| unknown [Zea mays] 95 1e-17
gb|EEE67942.1| hypothetical protein OsJ_25830 [Oryza sativa Japo... 95 1e-17
gb|ACG30976.1| 40S ribosomal protein S13 [Zea mays] 95 1e-17
gb|ACG24851.1| 40S ribosomal protein S13 [Zea mays] gi|195606244... 95 1e-17
ref|NP_001060860.2| Os08g0117200 [Oryza sativa Japonica Group] g... 95 1e-17
ref|NP_001140221.1| uncharacterized protein LOC100272255 [Zea ma... 95 1e-17
>ref|NP_001105708.1| 40S ribosomal protein S13 [Zea mays]
gi|464705|sp|Q05761.1|RS13_MAIZE RecName: Full=40S
ribosomal protein S13 gi|288059|emb|CAA44311.1|
cytoplasmatic ribosomal protein S13 [Zea mays]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142
>ref|XP_006659769.1| PREDICTED: 40S ribosomal protein S13-2-like, partial [Oryza
brachyantha]
Length = 144
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 92 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 135
>ref|XP_004973004.1| PREDICTED: 40S ribosomal protein S13-like [Setaria italica]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142
>ref|XP_004973003.1| PREDICTED: 40S ribosomal protein S13-like [Setaria italica]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142
>gb|AAU82114.1| cytoplasmatic ribosomal protein S13 [Triticum aestivum]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142
>pdb|1YSH|E Chain E, Localization And Dynamic Behavior Of Ribosomal Protein
L30e
Length = 84
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 35 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 78
>ref|NP_001060861.1| Os08g0117300 [Oryza sativa Japonica Group]
gi|75289720|sp|Q69UI1.1|RS132_ORYSJ RecName: Full=40S
ribosomal protein S13-2 gi|50725632|dbj|BAD33099.1|
putative 40S RIBOSOMAL PROTEIN S13 [Oryza sativa
Japonica Group] gi|113622830|dbj|BAF22775.1|
Os08g0117300 [Oryza sativa Japonica Group]
gi|215679023|dbj|BAG96453.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215765110|dbj|BAG86807.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218200394|gb|EEC82821.1| hypothetical protein
OsI_27610 [Oryza sativa Indica Group]
gi|222639811|gb|EEE67943.1| hypothetical protein
OsJ_25831 [Oryza sativa Japonica Group]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142
>ref|XP_003573309.1| PREDICTED: 40S ribosomal protein S13-1-like [Brachypodium
distachyon]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142
>ref|XP_003573306.1| PREDICTED: 40S ribosomal protein S13-like [Brachypodium distachyon]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142
>dbj|BAJ86822.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142
>dbj|BAJ94727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 116
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 64 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 107
>ref|XP_002969362.1| hypothetical protein SELMODRAFT_440805 [Selaginella moellendorffii]
gi|302774555|ref|XP_002970694.1| hypothetical protein
SELMODRAFT_171673 [Selaginella moellendorffii]
gi|300161405|gb|EFJ28020.1| hypothetical protein
SELMODRAFT_171673 [Selaginella moellendorffii]
gi|300162838|gb|EFJ29450.1| hypothetical protein
SELMODRAFT_440805 [Selaginella moellendorffii]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLIL+ESRVHRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILIESRVHRLARYYKRTKKLPPTWKYE 142
>ref|XP_002444935.1| hypothetical protein SORBIDRAFT_07g001670 [Sorghum bicolor]
gi|241941285|gb|EES14430.1| hypothetical protein
SORBIDRAFT_07g001670 [Sorghum bicolor]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142
>gb|AFW61363.1| hypothetical protein ZEAMMB73_870097 [Zea mays]
gi|413941712|gb|AFW74361.1| hypothetical protein
ZEAMMB73_979667 [Zea mays]
Length = 116
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 64 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 107
>gb|ACN31452.1| unknown [Zea mays]
Length = 107
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 55 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 98
>gb|EEE67942.1| hypothetical protein OsJ_25830 [Oryza sativa Japonica Group]
Length = 144
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 92 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 135
>gb|ACG30976.1| 40S ribosomal protein S13 [Zea mays]
Length = 148
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 96 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 139
>gb|ACG24851.1| 40S ribosomal protein S13 [Zea mays] gi|195606244|gb|ACG24952.1|
40S ribosomal protein S13 [Zea mays]
gi|195606418|gb|ACG25039.1| 40S ribosomal protein S13
[Zea mays] gi|219885953|gb|ACL53351.1| unknown [Zea
mays] gi|413941715|gb|AFW74364.1| 40S ribosomal protein
S13 [Zea mays]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142
>ref|NP_001060860.2| Os08g0117200 [Oryza sativa Japonica Group]
gi|209573729|sp|Q69UI2.2|RS131_ORYSJ RecName: Full=40S
ribosomal protein S13-1 gi|582044872|pdb|3J60|N Chain N,
Localization Of The Small Subunit Ribosomal Proteins
Into A 5.5 A Cryo-em Map Of Triticum Aestivum
Translating 80s Ribosome gi|218200392|gb|EEC82819.1|
hypothetical protein OsI_27608 [Oryza sativa Indica
Group] gi|255678110|dbj|BAF22774.2| Os08g0117200 [Oryza
sativa Japonica Group]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142
>ref|NP_001140221.1| uncharacterized protein LOC100272255 [Zea mays]
gi|242080327|ref|XP_002444932.1| hypothetical protein
SORBIDRAFT_07g001620 [Sorghum bicolor]
gi|194698554|gb|ACF83361.1| unknown [Zea mays]
gi|194702168|gb|ACF85168.1| unknown [Zea mays]
gi|195605590|gb|ACG24625.1| 40S ribosomal protein S13
[Zea mays] gi|195613248|gb|ACG28454.1| 40S ribosomal
protein S13 [Zea mays] gi|195659433|gb|ACG49184.1| 40S
ribosomal protein S13 [Zea mays]
gi|241941282|gb|EES14427.1| hypothetical protein
SORBIDRAFT_07g001620 [Sorghum bicolor]
gi|413921429|gb|AFW61361.1| 40S ribosomal protein S13
[Zea mays]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 3 RKHLERNRKDKDSKFRLILVESRVHRLARYYKRTKKLPPTWKYE 134
RKHLERNRKDKDSKFRLILVESR+HRLARYYKRTKKLPPTWKYE
Sbjct: 99 RKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYE 142