BLASTX nr result

ID: Ephedra27_contig00000308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00000308
         (511 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838874.1| hypothetical protein AMTR_s00002p00267110 [A...    57   2e-06
gb|ABK21090.1| unknown [Picea sitchensis]                              57   3e-06
gb|ABK23169.1| unknown [Picea sitchensis]                              57   3e-06

>ref|XP_006838874.1| hypothetical protein AMTR_s00002p00267110 [Amborella trichopoda]
           gi|548841380|gb|ERN01443.1| hypothetical protein
           AMTR_s00002p00267110 [Amborella trichopoda]
          Length = 289

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
 Frame = +2

Query: 125 PLLSTVSLKRINCVTNSSGFLRAEEEAQVRRPPPLHFESVEYEEQLANSVHLIGKVASTI 304
           PL   + L  I C +    +   EE+  V  P P     ++++++LANSV+LIG V + +
Sbjct: 40  PLSPQLHLSHIKCTSGYGDY--REEQGHVVYPRP---SEIQWKKELANSVNLIGIVGAPV 94

Query: 305 EYNIENGTINSSWTKLALNID-GDIMHVYLLFGKDLAGTALEHLQFSDTIYVFGELSQIG 481
           E    N     +WT+L +     +   V L F  +LA  A +H++    IYV G L    
Sbjct: 95  EVKYLNSGKILAWTRLGVKKSASETFWVNLTFWNELANVAFQHIEKGQQIYVSGRLVADT 154

Query: 482 VVGAD 496
           V G D
Sbjct: 155 VEGED 159


>gb|ABK21090.1| unknown [Picea sitchensis]
          Length = 392

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
 Frame = +2

Query: 188 RAEEEAQVRRPPPLHFESVEYEEQLANSVHLIGKVASTIEYNIENGTINSSWTKLALNI- 364
           R+ E     RP     + V +++ LAN VH IG +   +++        S+ T+L + I 
Sbjct: 81  RSRENGNYPRP-----QEVPWQQMLANRVHFIGTIGQPVQFKHTRSGKASASTRLGVKIG 135

Query: 365 -DGDIMHVYLLFGKDLAGTALEHLQFSDTIYVFGELSQIGVVGAD 496
             G+IM   L+F  +LA TA +HL+ +D +YV G L      G D
Sbjct: 136 SQGEIMWFTLVFWNELAETAAQHLKINDKVYVSGFLGLQSTAGED 180


>gb|ABK23169.1| unknown [Picea sitchensis]
          Length = 390

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
 Frame = +2

Query: 191 AEEEAQVRRPPPLHFESVEYEEQLANSVHLIGKVASTIEYNIENGTINSSWTKLAL--NI 364
           + E A+  RP     + V ++++LAN+VH IG + S +++         +WT+LA+    
Sbjct: 132 SREIAKFLRP-----QEVPWQKELANTVHFIGTIGSPVQFKHTQSGKALAWTRLAVRSGS 186

Query: 365 DGDIMHVYLLFGKDLAGTALEHLQFSDTIYVFGELS 472
           +G+ M   L+F  +LA TA +HL+ +D +YV G L+
Sbjct: 187 NGETMWFTLMFWNELAETAAQHLKKNDKVYVSGFLA 222


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