BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00000281
         (752 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...    96   1e-17
ref|NP_001151728.1| ribonucleoprotein A [Zea mays] gi|195649373|...    96   1e-17
gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativ...    96   1e-17
ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group] g...    96   2e-17
gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indi...    96   2e-17
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    95   2e-17
ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis...    95   3e-17
dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]        95   3e-17
dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]        95   3e-17
ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chlo...    95   3e-17
tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea m...    95   3e-17
ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arab...    95   3e-17
ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [S...    95   3e-17
ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...    94   4e-17
ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Caps...    94   4e-17
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...    94   4e-17
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri...    94   4e-17
ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp...    94   4e-17
sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,...    94   6e-17
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr...    94   6e-17

>ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
           [Brachypodium distachyon]
          Length = 275

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 46/64 (71%), Positives = 52/64 (81%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           KLFVGNL + VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM+T E    A E+
Sbjct: 85  KLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEVSAAVEQ 144

Query: 16  FNGY 5
           FNGY
Sbjct: 145 FNGY 148



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 35/69 (50%), Positives = 45/69 (65%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           DSG KL+VGNLS+ VD+  L  LF E G+V   +VIYDR +GRSRGFGFVT  + +    
Sbjct: 186 DSGNKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNN 245

Query: 28  AFERFNGYE 2
           A    +G +
Sbjct: 246 AISNLDGVD 254


>ref|NP_001151728.1| ribonucleoprotein A [Zea mays] gi|195649373|gb|ACG44154.1|
           ribonucleoprotein A [Zea mays]
           gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A
           [Zea mays]
          Length = 268

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 45/64 (70%), Positives = 54/64 (84%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           KLFVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM++ E  + A E+
Sbjct: 80  KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAEAAVEQ 139

Query: 16  FNGY 5
           FNGY
Sbjct: 140 FNGY 143



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           DS  K++VGNL++ VD+  L  LF E G+V   +VIYDR +GRSRGFGFVT  + +    
Sbjct: 181 DSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAQEVNN 240

Query: 28  AFERFNGYE 2
           A    +G +
Sbjct: 241 AISNLDGID 249


>gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group]
          Length = 205

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 45/64 (70%), Positives = 53/64 (82%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           K+FVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM+T E    A E+
Sbjct: 22  KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81

Query: 16  FNGY 5
           FNGY
Sbjct: 82  FNGY 85



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 43/69 (62%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           DS  KL+VGNL++ VD+  L  LF E G V   +VIYDR +GRSRGFGFVT  + E    
Sbjct: 118 DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNN 177

Query: 28  AFERFNGYE 2
           A    +G +
Sbjct: 178 AISNLDGVD 186


>ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group]
           gi|22296371|dbj|BAC10140.1| putative 29 kDa
           ribonucleoprotein A, chloroplast precursor [Oryza sativa
           Japonica Group] gi|113611900|dbj|BAF22278.1|
           Os07g0631900 [Oryza sativa Japonica Group]
           gi|125601192|gb|EAZ40768.1| hypothetical protein
           OsJ_25244 [Oryza sativa Japonica Group]
          Length = 264

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 45/64 (70%), Positives = 53/64 (82%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           K+FVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM+T E    A E+
Sbjct: 81  KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 140

Query: 16  FNGY 5
           FNGY
Sbjct: 141 FNGY 144



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 43/69 (62%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           DS  KL+VGNL++ VD+  L  LF E G V   +VIYDR +GRSRGFGFVT  + E    
Sbjct: 177 DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNN 236

Query: 28  AFERFNGYE 2
           A    +G +
Sbjct: 237 AISNLDGVD 245


>gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group]
          Length = 259

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 45/64 (70%), Positives = 53/64 (82%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           K+FVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM+T E    A E+
Sbjct: 76  KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 135

Query: 16  FNGY 5
           FNGY
Sbjct: 136 FNGY 139



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 43/69 (62%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           DS  KL+VGNL++ VD+  L  LF E G V   +VIYDR +GRSRGFGFVT  + E    
Sbjct: 172 DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNN 231

Query: 28  AFERFNGYE 2
           A    +G +
Sbjct: 232 AISNLDGVD 240


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 46/65 (70%), Positives = 54/65 (83%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           KLFVGNL +NVDS  LAGLF++AG V MVEVIYD+ TGRSRGFGFVTM+T E  + A ++
Sbjct: 91  KLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQ 150

Query: 16  FNGYE 2
           FNGYE
Sbjct: 151 FNGYE 155



 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 34/69 (49%), Positives = 43/69 (62%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           +S  +++VGNLS+ VD   L  LF E G+V    VIYDR TGRSRGFGFVT  + E    
Sbjct: 201 NSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNR 260

Query: 28  AFERFNGYE 2
           A E  +G +
Sbjct: 261 AIESLDGVD 269


>ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
           gi|186511018|ref|NP_850692.2| chloroplast RNA-binding
           protein 29 [Arabidopsis thaliana]
           gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding
           protein 29 [Arabidopsis thaliana]
           gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa
           ribonucleoprotein, chloroplastic; AltName:
           Full=RNA-binding protein cp29; Flags: Precursor
           gi|6729497|emb|CAB67653.1| RNA-binding protein cp29
           protein [Arabidopsis thaliana]
           gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160
           [Arabidopsis thaliana] gi|18655393|gb|AAL76152.1|
           AT3g53460/F4P12_160 [Arabidopsis thaliana]
           gi|21593426|gb|AAM65393.1| RNA-binding protein cp29
           protein [Arabidopsis thaliana]
           gi|332645568|gb|AEE79089.1| chloroplast RNA-binding
           protein 29 [Arabidopsis thaliana]
           gi|332645569|gb|AEE79090.1| chloroplast RNA-binding
           protein 29 [Arabidopsis thaliana]
           gi|332645570|gb|AEE79091.1| chloroplast RNA-binding
           protein 29 [Arabidopsis thaliana]
          Length = 342

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 50/78 (64%), Positives = 58/78 (74%)
 Frame = -2

Query: 235 RNEPSPVMDDSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 56
           RN  SP +     KLFVGNLS+NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVT
Sbjct: 92  RNSFSPDL-----KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146

Query: 55  MATEEGCKTAFERFNGYE 2
           M+T    + A ++FNGYE
Sbjct: 147 MSTAAEVEAAAQQFNGYE 164



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 33/66 (50%), Positives = 44/66 (66%)
 Frame = -2

Query: 205 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 26
           SG +L+VGNLS+ VD   L  LF E G+V    VIYDR +GRS+GFGFVT+++ +  + A
Sbjct: 255 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314

Query: 25  FERFNG 8
               NG
Sbjct: 315 INSLNG 320


>dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
          Length = 326

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 50/78 (64%), Positives = 58/78 (74%)
 Frame = -2

Query: 235 RNEPSPVMDDSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 56
           RN  SP +     KLFVGNLS+NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVT
Sbjct: 84  RNSFSPDL-----KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 138

Query: 55  MATEEGCKTAFERFNGYE 2
           M+T    + A ++FNGYE
Sbjct: 139 MSTAAEVEAAAQQFNGYE 156



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 33/66 (50%), Positives = 44/66 (66%)
 Frame = -2

Query: 205 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 26
           SG +L+VGNLS+ VD   L  LF E G+V    VIYDR +GRS+GFGFVT+++ +  + A
Sbjct: 239 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 298

Query: 25  FERFNG 8
               NG
Sbjct: 299 INSLNG 304


>dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
          Length = 334

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 50/78 (64%), Positives = 58/78 (74%)
 Frame = -2

Query: 235 RNEPSPVMDDSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 56
           RN  SP +     KLFVGNLS+NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVT
Sbjct: 92  RNSFSPDL-----KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146

Query: 55  MATEEGCKTAFERFNGYE 2
           M+T    + A ++FNGYE
Sbjct: 147 MSTAAEVEAAAQQFNGYE 164



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 33/66 (50%), Positives = 44/66 (66%)
 Frame = -2

Query: 205 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 26
           SG +L+VGNLS+ VD   L  LF E G+V    VIYDR +GRS+GFGFVT+++ +  + A
Sbjct: 247 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 306

Query: 25  FERFNG 8
               NG
Sbjct: 307 INSLNG 312


>ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Setaria
           italica]
          Length = 265

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 45/64 (70%), Positives = 53/64 (82%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           KLFVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM++ E    A E+
Sbjct: 79  KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQ 138

Query: 16  FNGY 5
           FNGY
Sbjct: 139 FNGY 142



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 35/69 (50%), Positives = 45/69 (65%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           DSG K++VGNLS+ VD+  L  LF E G+V   +VIYDR +GRSRGFGFVT  + E    
Sbjct: 178 DSGNKVYVGNLSWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGSAEEVNN 237

Query: 28  AFERFNGYE 2
           A    +G +
Sbjct: 238 AISNLDGID 246


>tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea mays]
          Length = 267

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 45/64 (70%), Positives = 53/64 (82%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           KLFVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM++ E    A E+
Sbjct: 78  KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQ 137

Query: 16  FNGY 5
           FNGY
Sbjct: 138 FNGY 141



 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 34/69 (49%), Positives = 45/69 (65%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           DSG K++VGNL++ VD+  L  LF E G+V   +VIYDR +GRSRGFGFVT  + E    
Sbjct: 180 DSGNKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAEEVNN 239

Query: 28  AFERFNGYE 2
           A    +G +
Sbjct: 240 AISNLDGID 248


>ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
           lyrata] gi|297323759|gb|EFH54180.1| hypothetical protein
           ARALYDRAFT_348440 [Arabidopsis lyrata subsp. lyrata]
          Length = 339

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 50/78 (64%), Positives = 58/78 (74%)
 Frame = -2

Query: 235 RNEPSPVMDDSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 56
           RN  SP +     KLFVGNLS+NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVT
Sbjct: 92  RNSFSPDL-----KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146

Query: 55  MATEEGCKTAFERFNGYE 2
           M+T    + A ++FNGYE
Sbjct: 147 MSTAAEVEAAAQQFNGYE 164



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 33/66 (50%), Positives = 44/66 (66%)
 Frame = -2

Query: 205 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 26
           SG +L+VGNLS+ VD   L  LF E G+V    VIYDR +GRS+GFGFVT+++ +  + A
Sbjct: 252 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 311

Query: 25  FERFNG 8
               NG
Sbjct: 312 INSLNG 317


>ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
           gi|241924453|gb|EER97597.1| hypothetical protein
           SORBIDRAFT_02g040260 [Sorghum bicolor]
          Length = 268

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 45/64 (70%), Positives = 53/64 (82%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           KLFVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM++ E    A E+
Sbjct: 79  KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQ 138

Query: 16  FNGY 5
           FNGY
Sbjct: 139 FNGY 142



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 33/69 (47%), Positives = 43/69 (62%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           DS  K++VGNL++ VD+  L  LF E G+V   +VIYDR +GRSRGFGFVT  T      
Sbjct: 181 DSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGTAAEVNN 240

Query: 28  AFERFNGYE 2
           A    +G +
Sbjct: 241 AISNLDGID 249


>ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like, partial
           [Oryza brachyantha]
          Length = 211

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 44/64 (68%), Positives = 53/64 (82%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           K+FVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM++ E    A E+
Sbjct: 28  KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSSSEEAGAAVEQ 87

Query: 16  FNGY 5
           FNGY
Sbjct: 88  FNGY 91



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 43/69 (62%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           DS  K++VGNLS+ VD+  L  LF E G V   +VIYDR +GRSRGFGFVT  + E    
Sbjct: 124 DSSNKVYVGNLSWGVDNSTLENLFSEQGNVLDAKVIYDRESGRSRGFGFVTYGSAEEVTN 183

Query: 28  AFERFNGYE 2
           A    +G +
Sbjct: 184 AISNLDGVD 192


>ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Capsella rubella]
           gi|482560193|gb|EOA24384.1| hypothetical protein
           CARUB_v10017634mg [Capsella rubella]
          Length = 327

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 46/65 (70%), Positives = 53/65 (81%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           KLFVGNLS+NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVTM+T    + A ++
Sbjct: 94  KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 153

Query: 16  FNGYE 2
           FNGYE
Sbjct: 154 FNGYE 158



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 32/66 (48%), Positives = 44/66 (66%)
 Frame = -2

Query: 205 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 26
           SG +L+VGNLS+ VD   L  +F E G+V    VIYDR +GRS+GFGFVT+++ +  + A
Sbjct: 240 SGNRLYVGNLSWGVDDMALENMFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 299

Query: 25  FERFNG 8
               NG
Sbjct: 300 INSLNG 305


>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 4/74 (5%)
 Frame = -2

Query: 211 DDSGY----KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATE 44
           DDS Y    KLFVGNL + VDS QLAGLF+ AG+V  VEVIYD+ TGRSRGFGFVTM+T 
Sbjct: 85  DDSSYAPDLKLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTV 144

Query: 43  EGCKTAFERFNGYE 2
              + A ++FNGYE
Sbjct: 145 GEVEAAAQQFNGYE 158



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
 Frame = -2

Query: 226 PSPVMDDSGYK-------------LFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPT 86
           P P  DDS ++             + V NL++ VD   L  LF+E G V   +V+YDR +
Sbjct: 171 PPPKRDDSSFRGSRNASRFDNRNRVHVSNLAWGVDDLTLENLFREKGNVLEAKVVYDRDS 230

Query: 85  GRSRGFGFVTMATEEGCKTAFERFNGYE 2
           G+SRGFGFVT  + E    A +  +G +
Sbjct: 231 GKSRGFGFVTYNSAEEVNEAIQSLDGVD 258


>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223541388|gb|EEF42939.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 280

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 45/65 (69%), Positives = 54/65 (83%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           KLFVGNL +NVDS QLAGLF+ AG V MVEVIYD+ TGRSRGFGFVTM++ +  + A ++
Sbjct: 93  KLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQ 152

Query: 16  FNGYE 2
           FNGYE
Sbjct: 153 FNGYE 157



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 33/67 (49%), Positives = 46/67 (68%)
 Frame = -2

Query: 202 GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAF 23
           G +L+VGNLS++VD+  L   F E G+V   +V+YDR +GRSRGFGFVT ++ E  + A 
Sbjct: 195 GNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAI 254

Query: 22  ERFNGYE 2
           +  NG E
Sbjct: 255 DSLNGAE 261


>ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
           gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 273

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 46/65 (70%), Positives = 53/65 (81%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           KLFVGNL +NVDS +LAGLF+ AG V MVEVIYD+ TGRSRGFGFVTM T E  + A ++
Sbjct: 91  KLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQ 150

Query: 16  FNGYE 2
           FNGYE
Sbjct: 151 FNGYE 155



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           DSG +++VGNLS+NVD+  L  LF+E G V   +V+YDR +GRSRGFGFVT ++ E    
Sbjct: 186 DSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDN 245

Query: 28  AFERFNGYE 2
           A +  NG E
Sbjct: 246 AIDSLNGAE 254


>sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
           Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1|
           29kD B ribonucleoprotein [Nicotiana sylvestris]
          Length = 291

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 45/65 (69%), Positives = 54/65 (83%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           KLFVGNL ++VDS  LAGLF+ AG V MVEVIYD+ TGRSRGFGFVTM+T+E  + A ++
Sbjct: 88  KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQ 147

Query: 16  FNGYE 2
           FNGYE
Sbjct: 148 FNGYE 152



 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -2

Query: 208 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 29
           DS  +++VGNLS+ VD   L  LF E G V   +V+YDR +GRSRGFGFVT ++ +    
Sbjct: 204 DSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVND 263

Query: 28  AFERFNGYE 2
           A +  NG +
Sbjct: 264 AIDSLNGVD 272


>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|568855826|ref|XP_006481497.1| PREDICTED:
           ribonucleoprotein At2g37220, chloroplastic-like [Citrus
           sinensis] gi|557530828|gb|ESR42011.1| hypothetical
           protein CICLE_v10012331mg [Citrus clementina]
          Length = 282

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 45/65 (69%), Positives = 54/65 (83%)
 Frame = -2

Query: 196 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 17
           KLFVGNL ++VDS QLAGLF+ AG V MVEVIYD+ TGRSRGFGFVTM++ E  + A ++
Sbjct: 95  KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQ 154

Query: 16  FNGYE 2
           FNGYE
Sbjct: 155 FNGYE 159



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 32/67 (47%), Positives = 45/67 (67%)
 Frame = -2

Query: 202 GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAF 23
           G +++VGNLS+ VD   L  LF+E G+V   +V+YDR +GRSRGFGFVT ++ E    A 
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255

Query: 22  ERFNGYE 2
           +  NG +
Sbjct: 256 DSLNGVD 262