BLASTX nr result
ID: Ephedra27_contig00000202
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00000202
(466 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 74 2e-11
gb|ABK25403.1| unknown [Picea sitchensis] 74 2e-11
sp|P13951.1|RBS_SINAL RecName: Full=Ribulose bisphosphate carbox... 74 3e-11
ref|XP_002868776.1| ribulose bisphosphate carboxylase [Arabidops... 74 3e-11
ref|XP_002868775.1| ribulose bisphosphate carboxylase small chai... 74 3e-11
ref|XP_002888576.1| ribulose bisphosphate carboxylase small chai... 73 3e-11
gb|AFS41748.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 73 4e-11
gb|AFS41733.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 73 4e-11
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 73 4e-11
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 73 4e-11
ref|NP_176880.1| ribulose bisphosphate carboxylase small chain 1... 72 6e-11
ref|XP_006285820.1| hypothetical protein CARUB_v10007296mg [Caps... 72 6e-11
ref|XP_006285696.1| hypothetical protein CARUB_v10007166mg [Caps... 72 6e-11
ref|XP_006284616.1| hypothetical protein CARUB_v10005847mg [Caps... 72 6e-11
gb|AAG40356.1|AF325004_1 At1g67090 [Arabidopsis thaliana] 72 6e-11
gb|AAK49590.1|AF372874_1 F1O19.10/F1O19.10 [Arabidopsis thaliana] 72 6e-11
emb|CAA31948.1| ribulose bisphosphate carboxylase [Arabidopsis t... 72 8e-11
gb|AFS41753.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 72 8e-11
gb|AEX60842.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 72 8e-11
gb|AEX60839.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 72 8e-11
>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 179
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KKAYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 133 CTDSAQVLKELEEAKKAYPTAFIRIIGFDNKRQVQCISFIAYKP 176
>gb|ABK25403.1| unknown [Picea sitchensis]
Length = 188
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C +SA VL E+EE KKAYP A++RC+GFDN RQ QCI+FIVHKP
Sbjct: 141 CTNSAQVLSELEECKKAYPNAYIRCLGFDNKRQTQCIAFIVHKP 184
>sp|P13951.1|RBS_SINAL RecName: Full=Ribulose bisphosphate carboxylase small chain;
Short=RuBisCO small subunit gi|1345574|emb|CAA34458.1|
unnamed protein product [Sinapis alba]
Length = 82
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E++E KK YP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 33 CTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 76
>ref|XP_002868776.1| ribulose bisphosphate carboxylase [Arabidopsis lyrata subsp.
lyrata] gi|297314612|gb|EFH45035.1| ribulose
bisphosphate carboxylase [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E++E KK YP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 132 CTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 175
>ref|XP_002868775.1| ribulose bisphosphate carboxylase small chain 1B [Arabidopsis
lyrata subsp. lyrata] gi|297314611|gb|EFH45034.1|
ribulose bisphosphate carboxylase small chain 1B
[Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E++E KK YP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 132 CTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 175
>ref|XP_002888576.1| ribulose bisphosphate carboxylase small chain 1A [Arabidopsis
lyrata subsp. lyrata] gi|297334417|gb|EFH64835.1|
ribulose bisphosphate carboxylase small chain 1A
[Arabidopsis lyrata subsp. lyrata]
Length = 180
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KK YP+AF+R IGFDN+RQVQCISFI +KP
Sbjct: 132 CTDSAQVLKEVEECKKEYPEAFIRIIGFDNSRQVQCISFIAYKP 175
>gb|AFS41748.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium tomentosum]
Length = 179
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KKAYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 133 CTDSAQVLKELEECKKAYPNAFIRIIGFDNVRQVQCISFIAYKP 176
>gb|AFS41733.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
Length = 179
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KKAYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 133 CTDSAQVLKELEECKKAYPNAFIRIIGFDNVRQVQCISFIAYKP 176
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 72.8 bits (177), Expect = 4e-11
Identities = 34/44 (77%), Positives = 36/44 (81%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KKAYP AFVR IGFDN RQVQCISFI KP
Sbjct: 135 CTDSAQVLKELEECKKAYPTAFVRIIGFDNKRQVQCISFIAFKP 178
>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
[Corchorus olitorius]
Length = 183
Score = 72.8 bits (177), Expect = 4e-11
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DS+ VL+E+EE KKAYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 134 CTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQCISFIAYKP 177
>ref|NP_176880.1| ribulose bisphosphate carboxylase small chain 1A [Arabidopsis
thaliana] gi|27735223|sp|P10795.2|RBS1A_ARATH RecName:
Full=Ribulose bisphosphate carboxylase small chain 1A,
chloroplastic; Short=RuBisCO small subunit 1A; Flags:
Precursor gi|11762170|gb|AAG40363.1|AF325011_1 000C10C11
[Arabidopsis thaliana]
gi|15294200|gb|AAK95277.1|AF410291_1 F1O19.10/F1O19.10
[Arabidopsis thaliana] gi|4204274|gb|AAD10655.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|15451002|gb|AAK96772.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|15809842|gb|AAL06849.1|
At1g67090/F1O19.10 [Arabidopsis thaliana]
gi|16604426|gb|AAL24219.1| At1g67090/F1O19.10
[Arabidopsis thaliana] gi|16649141|gb|AAL24422.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|17065072|gb|AAL32690.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|17065270|gb|AAL32789.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|17473628|gb|AAL38277.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|20260064|gb|AAM13379.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|20260080|gb|AAM13387.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|20453287|gb|AAM19882.1|
At1g67090/F1O19.10 [Arabidopsis thaliana]
gi|23198308|gb|AAN15681.1| ribulose bisphosphate
carboxylase, small subunit [Arabidopsis thaliana]
gi|25083492|gb|AAN72087.1| ribulose bisphosphate
carboxylase, small subunit [Arabidopsis thaliana]
gi|110741032|dbj|BAE98610.1| ribulose bisphosphate
carboxylase like protein, small subunit [Arabidopsis
thaliana] gi|110741446|dbj|BAE98685.1| ribulose
bisphosphate carboxylase like protein, small subunit
[Arabidopsis thaliana] gi|110741475|dbj|BAE98695.1|
ribulose bisphosphate carboxylase like protein, small
subunit [Arabidopsis thaliana]
gi|110741865|dbj|BAE98874.1| ribulose bisphosphate
carboxylase like protein, small subunit [Arabidopsis
thaliana] gi|332196473|gb|AEE34594.1| ribulose
bisphosphate carboxylase small chain 1A [Arabidopsis
thaliana]
Length = 180
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KK YP AF+R IGFDN RQVQCISFI +KP
Sbjct: 132 CTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>ref|XP_006285820.1| hypothetical protein CARUB_v10007296mg [Capsella rubella]
gi|482554525|gb|EOA18718.1| hypothetical protein
CARUB_v10007296mg [Capsella rubella]
Length = 181
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KK YP AF+R IGFDN RQVQCISFI +KP
Sbjct: 132 CTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>ref|XP_006285696.1| hypothetical protein CARUB_v10007166mg [Capsella rubella]
gi|482554401|gb|EOA18594.1| hypothetical protein
CARUB_v10007166mg [Capsella rubella]
Length = 181
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KK YP AF+R IGFDN RQVQCISFI +KP
Sbjct: 132 CTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>ref|XP_006284616.1| hypothetical protein CARUB_v10005847mg [Capsella rubella]
gi|482553321|gb|EOA17514.1| hypothetical protein
CARUB_v10005847mg [Capsella rubella]
Length = 181
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KK YP AF+R IGFDN RQVQCISFI +KP
Sbjct: 132 CTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>gb|AAG40356.1|AF325004_1 At1g67090 [Arabidopsis thaliana]
Length = 180
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KK YP AF+R IGFDN RQVQCISFI +KP
Sbjct: 132 CTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>gb|AAK49590.1|AF372874_1 F1O19.10/F1O19.10 [Arabidopsis thaliana]
Length = 125
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KK YP AF+R IGFDN RQVQCISFI +KP
Sbjct: 77 CTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 120
>emb|CAA31948.1| ribulose bisphosphate carboxylase [Arabidopsis thaliana]
Length = 182
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL+E+EE KK YP AF+R IGFDN RQVQCISF+ +KP
Sbjct: 134 CTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFVAYKP 177
>gb|AFS41753.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium mustelinum]
Length = 179
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL E+EE KKAYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 133 CTDSAQVLEELEECKKAYPNAFIRIIGFDNVRQVQCISFIAYKP 176
>gb|AEX60842.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366450|gb|AFS41722.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium arboreum] gi|406366452|gb|AFS41723.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium arboreum]
gi|406366466|gb|AFS41730.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366468|gb|AFS41731.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium hirsutum]
gi|406366480|gb|AFS41737.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366496|gb|AFS41745.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366510|gb|AFS41752.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium mustelinum] gi|406366524|gb|AFS41759.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium darwinii]
Length = 179
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL E+EE KKAYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 133 CTDSAQVLEELEECKKAYPNAFIRIIGFDNVRQVQCISFIAYKP 176
>gb|AEX60839.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366482|gb|AFS41738.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366498|gb|AFS41746.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366522|gb|AFS41758.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 179
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = -2
Query: 465 CNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 334
C DSA VL E+EE KKAYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 133 CTDSAQVLEELEECKKAYPNAFIRIIGFDNVRQVQCISFIAYKP 176