BLASTX nr result
ID: Ephedra27_contig00000091
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00000091
(467 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264508.1| PREDICTED: photosystem II reaction center W ... 75 7e-12
gb|ABK21312.1| unknown [Picea sitchensis] gi|116779706|gb|ABK213... 71 1e-10
gb|ACN40147.1| unknown [Picea sitchensis] gi|224285390|gb|ACN404... 70 3e-10
gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem I... 69 5e-10
gb|ABK21433.1| unknown [Picea sitchensis] gi|116791862|gb|ABK261... 69 6e-10
emb|CAA62296.1| component of 6.1 kDa polypeptide of photosystem ... 69 8e-10
ref|XP_006644788.1| PREDICTED: photosystem II reaction center W ... 68 1e-09
ref|XP_006295756.1| hypothetical protein CARUB_v10024876mg [Caps... 68 1e-09
ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [S... 68 1e-09
ref|NP_001044402.1| Os01g0773700 [Oryza sativa Japonica Group] g... 68 1e-09
gb|EOY11052.1| Photosystem II reaction center W protein, chlorop... 67 2e-09
ref|NP_180615.1| photosystem II reaction center W protein [Arabi... 67 2e-09
gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus pe... 67 2e-09
ref|XP_004247215.1| PREDICTED: photosystem II reaction center W ... 67 2e-09
gb|EOX94570.1| Photosystem II reaction center W [Theobroma cacao] 67 3e-09
dbj|BAJ92812.1| predicted protein [Hordeum vulgare subsp. vulgar... 66 5e-09
ref|XP_006349749.1| PREDICTED: photosystem II reaction center W ... 65 7e-09
ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutr... 65 7e-09
gb|AEJ88280.1| putative chloroplast photosystem II reaction cent... 65 7e-09
ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arab... 65 7e-09
>ref|XP_002264508.1| PREDICTED: photosystem II reaction center W protein, chloroplastic
[Vitis vinifera] gi|296087925|emb|CBI35208.3| unnamed
protein product [Vitis vinifera]
Length = 135
Score = 75.5 bits (184), Expect = 7e-12
Identities = 51/128 (39%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Frame = +2
Query: 77 ATLCNASALSSLGSRTIKSPVAILPLAAGNGKRRVACKAEKQGAGSVAGPLV---ATAVA 247
AT ++++S G I SPV LP A G RV C +E++ GS G + A+ +A
Sbjct: 10 ATSLVRASVASKGLNGISSPVLGLPAMAKKG--RVRCMSEEKPCGSDMGSSISMGASLMA 67
Query: 248 LHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQE 427
++ AMALVD+R+STE WIL GVFGLIW LY + ++E
Sbjct: 68 AAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTATLEE 127
Query: 428 DDE-GLSL 448
DDE GLSL
Sbjct: 128 DDESGLSL 135
>gb|ABK21312.1| unknown [Picea sitchensis] gi|116779706|gb|ABK21398.1| unknown
[Picea sitchensis] gi|116790469|gb|ABK25626.1| unknown
[Picea sitchensis] gi|116791712|gb|ABK26081.1| unknown
[Picea sitchensis] gi|116791741|gb|ABK26091.1| unknown
[Picea sitchensis] gi|148907724|gb|ABR16989.1| unknown
[Picea sitchensis] gi|224285778|gb|ACN40604.1| unknown
[Picea sitchensis]
Length = 146
Score = 71.2 bits (173), Expect = 1e-10
Identities = 57/142 (40%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Frame = +2
Query: 68 TMAATLCNASALSSLGSRTIKSPVAILPLAAGNGKRRVACKAEKQG-------------- 205
+++A L N S S+ SR V LP KR C A+KQ
Sbjct: 12 SVSAFLLNRSLGSAAASRPSSLSVVGLPAL---DKRCTVCYAQKQEEIVRAKENSQNCMV 68
Query: 206 AGSVAGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGL 385
+ A PL+A A AL S T A ALVD+R+STE WILVGVF L
Sbjct: 69 SLGGAAPLMAVAAALTVS----TKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTL 124
Query: 386 IWTLYVSTYTNVQED-DEGLSL 448
IW LY +TY+NV+ED D GLSL
Sbjct: 125 IWILYFTTYSNVKEDEDSGLSL 146
>gb|ACN40147.1| unknown [Picea sitchensis] gi|224285390|gb|ACN40418.1| unknown
[Picea sitchensis]
Length = 149
Score = 70.1 bits (170), Expect = 3e-10
Identities = 55/142 (38%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Frame = +2
Query: 68 TMAATLCNASALSSLGSRTIKSPVAILPLAAGNGKRRVACKAEKQG-------------- 205
+++A L N S S+ SR V + KR C A+KQ
Sbjct: 12 SVSAFLLNRSLGSAAASRPSSLSVVGMTGLPALDKRCTVCYAQKQEEIVRAKENSQNCMV 71
Query: 206 AGSVAGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGL 385
+ A PL+A A AL S T A ALVD+R+STE WILVGVF L
Sbjct: 72 SLGGAAPLMAVAAALTVS----TKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTL 127
Query: 386 IWTLYVSTYTNVQED-DEGLSL 448
IW LY +TY+NV+ED D GLSL
Sbjct: 128 IWILYFTTYSNVKEDEDSGLSL 149
>gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem II reaction center
[Brassica rapa]
Length = 133
Score = 69.3 bits (168), Expect = 5e-10
Identities = 51/111 (45%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Frame = +2
Query: 125 IKSPVAILPLAAGNGKRRVACKAE-KQGAGSVAGPLV-ATAVALHGSMMDKTNVAMALVD 298
+ +PV LP G K V C E KQG S G V A A A ++M +N AMALVD
Sbjct: 26 VSAPVLGLP-PMGKRKGGVRCSMEPKQGNVSAVGAGVSAAATAALTAVM--SNPAMALVD 82
Query: 299 DRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE-GLSL 448
DRMSTE WIL+GVFGLIWT Y + +++ ED+E GLSL
Sbjct: 83 DRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLDEDEESGLSL 133
>gb|ABK21433.1| unknown [Picea sitchensis] gi|116791862|gb|ABK26137.1| unknown
[Picea sitchensis] gi|116791959|gb|ABK26178.1| unknown
[Picea sitchensis] gi|148906058|gb|ABR16188.1| unknown
[Picea sitchensis] gi|148907944|gb|ABR17092.1| unknown
[Picea sitchensis] gi|224284792|gb|ACN40126.1| unknown
[Picea sitchensis] gi|224285006|gb|ACN40232.1| unknown
[Picea sitchensis]
Length = 146
Score = 68.9 bits (167), Expect = 6e-10
Identities = 56/142 (39%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Frame = +2
Query: 68 TMAATLCNASALSSLGSRTIKSPVAILPLAAGNGKRRVACKAEKQG-------------- 205
+++A L N S S+ SR V LP KR C A+KQ
Sbjct: 12 SVSAFLLNRSLGSAAASRPSSLSVVGLPAL---DKRCTVCYAQKQEEIVRAKENSQNCMV 68
Query: 206 AGSVAGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGL 385
+ A PL+A A AL S T A ALVD+R+STE WILVGVF L
Sbjct: 69 SLGGAAPLMAVAAALTVS----TKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTL 124
Query: 386 IWTLYVSTYTNVQED-DEGLSL 448
IW LY +TY+ V+ED D GLSL
Sbjct: 125 IWILYFTTYSGVKEDEDSGLSL 146
>emb|CAA62296.1| component of 6.1 kDa polypeptide of photosystem II reaction center
[Arabidopsis thaliana]
Length = 133
Score = 68.6 bits (166), Expect = 8e-10
Identities = 56/133 (42%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Frame = +2
Query: 65 YTMAATLCNASALSSLGSRT--IKSPVAILPLAAGNGKRRVACKAE-KQGAGSVAGPLV- 232
+T +A+ +A+ + L T I +PV LP G K V C E KQG SV G V
Sbjct: 4 FTASASTVSAARPALLLKPTVAISAPVLGLP-PMGKKKGGVRCSMETKQGNVSVMGAGVS 62
Query: 233 ATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTY 412
A A A ++M +N AMALVD+RMSTE WIL GVFGLIWT + +
Sbjct: 63 AAATAALTAVM--SNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFAYT 120
Query: 413 TNVQEDDE-GLSL 448
++++ED+E GLSL
Sbjct: 121 SSLEEDEESGLSL 133
>ref|XP_006644788.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Oryza brachyantha]
Length = 128
Score = 67.8 bits (164), Expect = 1e-09
Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Frame = +2
Query: 77 ATLCNASALSSLGSRTIKSPVAI-LPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALH 253
AT+ A+A + + + P A+ LP RV C K G + + V A A
Sbjct: 2 ATVSAAAATTVVARAVLARPNALGLPQMRARRSERVRCSYSKDGKEASSPAAVKGAGASL 61
Query: 254 GSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDD 433
+M AMALVD+RMSTE WIL+GVFGLIW+LY ++++ED+
Sbjct: 62 LAMAATAAPAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDE 121
Query: 434 E--GLSL 448
E GLSL
Sbjct: 122 ESGGLSL 128
>ref|XP_006295756.1| hypothetical protein CARUB_v10024876mg [Capsella rubella]
gi|482564464|gb|EOA28654.1| hypothetical protein
CARUB_v10024876mg [Capsella rubella]
Length = 133
Score = 67.8 bits (164), Expect = 1e-09
Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Frame = +2
Query: 65 YTMAATLCNASALSSLGSRTI--KSPVAILPLAAGNGKRRVACKAE-KQGAGSVAGPLV- 232
+T +A+ +A+ + L T+ +PV LP G K V C E KQG S G V
Sbjct: 4 FTASASTVSAARPALLLKPTVAVSAPVLGLP-PMGKKKGGVRCSMETKQGNVSAMGAGVS 62
Query: 233 ATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTY 412
A A A ++M +N AMALVD+RMSTE WIL GVFGLIWT Y
Sbjct: 63 AAATAALSAVM--SNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFVYT 120
Query: 413 TNVQEDDE-GLSL 448
++++ED+E GLSL
Sbjct: 121 SSLEEDEESGLSL 133
>ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [Sorghum bicolor]
gi|241930553|gb|EES03698.1| hypothetical protein
SORBIDRAFT_03g036090 [Sorghum bicolor]
Length = 126
Score = 67.8 bits (164), Expect = 1e-09
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Frame = +2
Query: 77 ATLCNASALSSLGSRTIKSPVAI-LPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALH 253
AT+ A+A + + I P A+ LP +R V C K A A A+ +A
Sbjct: 2 ATVSAAAATTVVARAAIARPNALGLPQLRARSER-VRCSYAKDAAAVSAKAAGASLLAAA 60
Query: 254 GSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDD 433
G++ A+ALVD+RMSTE WIL+GVFGLIW+LY +++ ED+
Sbjct: 61 GAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSDLDEDE 120
Query: 434 E-GLSL 448
E GLSL
Sbjct: 121 ESGLSL 126
>ref|NP_001044402.1| Os01g0773700 [Oryza sativa Japonica Group]
gi|75112952|sp|Q5ZBY9.1|PSBW_ORYSJ RecName:
Full=Photosystem II reaction center W protein,
chloroplastic; AltName: Full=PSII 6.1 kDa protein;
Flags: Precursor gi|53793363|dbj|BAD52944.1| putative
photosystem II reaction center W protein [Oryza sativa
Japonica Group] gi|113533933|dbj|BAF06316.1|
Os01g0773700 [Oryza sativa Japonica Group]
gi|125527886|gb|EAY76000.1| hypothetical protein
OsI_03925 [Oryza sativa Indica Group]
gi|215765750|dbj|BAG87447.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767329|dbj|BAG99557.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 124
Score = 67.8 bits (164), Expect = 1e-09
Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Frame = +2
Query: 77 ATLCNASALSSLGSRTIKSPVAILPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHG 256
AT+ A+A S + + P+ LP RV C K+ A A A A L
Sbjct: 2 ATVSAAAATSVVARAVLAGPLG-LPQMRARRSERVRCNYSKEAATPAAAVKGAGASLL-- 58
Query: 257 SMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 436
+M AMALVD+RMSTE WIL+GVFGLIW+LY ++++ED+E
Sbjct: 59 AMAATAAPAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDEE 118
Query: 437 --GLSL 448
GLSL
Sbjct: 119 SGGLSL 124
>gb|EOY11052.1| Photosystem II reaction center W protein, chloroplastic, putative
[Theobroma cacao]
Length = 135
Score = 67.4 bits (163), Expect = 2e-09
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Frame = +2
Query: 77 ATLCNASALSSLGSRTIK-------SPVAILPLAAGNGKRRVACKAEKQGAGSVAGP-LV 232
AT+ ++ + L T+K SPV LP+ A NG+ R + ++ + P +V
Sbjct: 2 ATITASNFAAVLPKATLKGSYKVQSSPVLGLPVMATNGRVRCTLEQKRSASSMSLNPSMV 61
Query: 233 ATAVALHGSMMDKT-NVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVST 409
A+ +A + M T AMALVD+R+STE WIL G FGLIW LY
Sbjct: 62 ASLMAAAAAAMTTTAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGAFGLIWALYFIY 121
Query: 410 YTNVQED-DEGLSL 448
++++ED D GLSL
Sbjct: 122 VSSLEEDEDSGLSL 135
>ref|NP_180615.1| photosystem II reaction center W protein [Arabidopsis thaliana]
gi|122064936|sp|Q39194.2|PSBW_ARATH RecName:
Full=Photosystem II reaction center W protein,
chloroplastic; AltName: Full=PSII 6.1 kDa protein;
Flags: Precursor gi|11762232|gb|AAG40394.1|AF325042_1
At2g30570 [Arabidopsis thaliana]
gi|14030715|gb|AAK53032.1|AF375448_1 At2g30570/T6B20.8
[Arabidopsis thaliana] gi|1946362|gb|AAB63080.1|
photosystem II reaction center 6.1KD protein
[Arabidopsis thaliana] gi|21593002|gb|AAM64951.1|
photosystem II reaction center 6.1KD protein
[Arabidopsis thaliana] gi|23506075|gb|AAN28897.1|
At2g30570/T6B20.8 [Arabidopsis thaliana]
gi|330253315|gb|AEC08409.1| photosystem II reaction
center W protein [Arabidopsis thaliana]
Length = 133
Score = 67.4 bits (163), Expect = 2e-09
Identities = 56/133 (42%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Frame = +2
Query: 65 YTMAATLCNASALSSLGSRT--IKSPVAILPLAAGNGKRRVACKAE-KQGAGSVAGPLV- 232
+T +A+ +A+ + L T I +PV LP G K V C E KQG SV G V
Sbjct: 4 FTASASTVSAARPALLLKPTVAISAPVLGLP-PMGKKKGGVRCSMETKQGNVSVMGAGVS 62
Query: 233 ATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTY 412
A A A ++M +N AMALVD+RMSTE WIL GVFGLIWT +
Sbjct: 63 AAATAALTAVM--SNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYT 120
Query: 413 TNVQEDDE-GLSL 448
++++ED+E GLSL
Sbjct: 121 SSLEEDEESGLSL 133
>gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus persica]
Length = 165
Score = 67.0 bits (162), Expect = 2e-09
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Frame = +2
Query: 68 TMAATLCNASALSSLGSRTIKSPVAILPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVA 247
T +++ AS + + V LP A GK + + +K+ + S G + A A
Sbjct: 40 TPTSSITRASLVHKPSVGAPSATVLALPSLARKGKVGCSMEGKKESSNSKMGKGASLAAA 99
Query: 248 LHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQE 427
+ M ++ AMALVDDR+STE WIL GVFGLIWT Y ++++E
Sbjct: 100 AMAATM--SSPAMALVDDRLSTEGTGLPFGLSNNILGWILFGVFGLIWTFYFIYTSSLEE 157
Query: 428 DDE-GLSL 448
D+E GLSL
Sbjct: 158 DEESGLSL 165
>ref|XP_004247215.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum lycopersicum]
Length = 132
Score = 67.0 bits (162), Expect = 2e-09
Identities = 51/123 (41%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Frame = +2
Query: 95 SALSSLGSRTIKSPVAILPLAAGNGKRRVACKAEKQGAGS----VAGPLVATAVALHGSM 262
+AL GS + S V LP + GK V C E +G G + L+A AVA S
Sbjct: 16 AALVQRGSVSRTSVVLGLPSMSKGGK--VKCSMEGKGKGESKLGMGESLMAAAVAASMS- 72
Query: 263 MDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE-G 439
+ VAMALVD+RMSTE WIL+GVFGLIW+LY + + ED+E G
Sbjct: 73 ---SPVAMALVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSLYTVYTSGLDEDEESG 129
Query: 440 LSL 448
+SL
Sbjct: 130 MSL 132
>gb|EOX94570.1| Photosystem II reaction center W [Theobroma cacao]
Length = 135
Score = 66.6 bits (161), Expect = 3e-09
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Frame = +2
Query: 95 SALSSLGSRTIKSPVAI-LPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHGSMMDK 271
+AL+ S + S VAI LP A GK V C EK+ + G V + +L +
Sbjct: 16 AALAHKPSPRVASSVAIGLPAMAKKGK--VMCSMEKKSSAEEKGSNVGMSASLLAAACAA 73
Query: 272 T--NVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE-GL 442
T + AMALVD+RM+TE WIL VFGLIW LY+ ++++ED+E GL
Sbjct: 74 TMSSPAMALVDERMTTEGTGLPFGLSNNILGWILFAVFGLIWALYIVYTSSLEEDEESGL 133
Query: 443 SL 448
SL
Sbjct: 134 SL 135
>dbj|BAJ92812.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521836|dbj|BAK00494.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 128
Score = 65.9 bits (159), Expect = 5e-09
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Frame = +2
Query: 77 ATLCNASALSSLGSRTIKSPVAI-LPLAAGNGKRRVACKAEKQGAGSVAGPLV-ATAVAL 250
AT+ A+A + + I P A+ LP G+R V C K+ + A A+ +A
Sbjct: 2 ATISAAAATTVVARAAIARPQALGLPQLRTRGER-VRCSYSKEATPAAAARGAGASLLAA 60
Query: 251 HGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQED 430
G++ A+ALVD+RMSTE WIL+GVFGLIW+LY + + ED
Sbjct: 61 AGAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSGLDED 120
Query: 431 DE--GLSL 448
+E GLSL
Sbjct: 121 EESGGLSL 128
>ref|XP_006349749.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum tuberosum]
Length = 132
Score = 65.5 bits (158), Expect = 7e-09
Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Frame = +2
Query: 95 SALSSLGSRTIKSPVAILPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHGSMMDKT 274
+AL GS + S + LP + GK + + + + +G + A A+ SM +
Sbjct: 16 AALVQRGSVSRTSTILGLPSMSKGGKVKCSMEGKPKGESKLGMGESLMAAAVAASMSNP- 74
Query: 275 NVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE--GLSL 448
VAMALVD+RMSTE WIL GVFGLIW+LY + YT+ +DDE GLSL
Sbjct: 75 -VAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWSLY-TVYTSGIDDDEESGLSL 132
>ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutrema salsugineum]
gi|557111329|gb|ESQ51613.1| hypothetical protein
EUTSA_v10017409mg [Eutrema salsugineum]
Length = 133
Score = 65.5 bits (158), Expect = 7e-09
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = +2
Query: 125 IKSPVAILP-LAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHGSMMDKTNVAMALVDD 301
+ +PV LP ++ G R + + +++ V + A A A ++M +N AMALVDD
Sbjct: 26 VSTPVLGLPPMSKRKGGVRCSMEKKQENVSVVGAGVSAAATAALTAVM--SNPAMALVDD 83
Query: 302 RMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE-GLSL 448
RMSTE WIL GVFGLIWT Y ++++ED+E GLSL
Sbjct: 84 RMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFVYTSSLEEDEESGLSL 133
>gb|AEJ88280.1| putative chloroplast photosystem II reaction center W-like protein
[Wolffia australiana] gi|374096161|gb|AEY84993.1|
photosystem II reaction center W protein (chloroplast)
[Wolffia australiana]
Length = 132
Score = 65.5 bits (158), Expect = 7e-09
Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +2
Query: 98 ALSSLGSRTIKSPVAILPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHGSMMDKTN 277
A S G+ P+ LP G +V C A A P VA+ +A S+M +N
Sbjct: 19 ARPSAGAGASSLPLLGLPRRGGARAMQVKCSA---AAEEKKVPAVASLLAA-ASVMATSN 74
Query: 278 VAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE--GLSL 448
A+ALVD+R+STE WIL GVFGLIW LY YT+ E+DE GLSL
Sbjct: 75 PALALVDERLSTEGTGLSLGISNNLLAWILAGVFGLIWALYF-VYTSTLEEDEESGLSL 132
>ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arabidopsis lyrata subsp.
lyrata] gi|297326958|gb|EFH57378.1| hypothetical protein
ARALYDRAFT_902045 [Arabidopsis lyrata subsp. lyrata]
Length = 133
Score = 65.5 bits (158), Expect = 7e-09
Identities = 54/133 (40%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Frame = +2
Query: 65 YTMAATLCNASALSSLGSRTI--KSPVAILPLAAGNGKRRVACKAE-KQGAGSVAGPLV- 232
+T +A+ +A+ + L T+ +PV LP G K V C E KQG S G V
Sbjct: 4 FTASASTVSAARPAILLKPTVAVSAPVLGLP-PMGKKKGGVRCSMETKQGNVSAMGAGVS 62
Query: 233 ATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTY 412
A A A ++M +N AMALVD+RMSTE WIL GVFGLIWT +
Sbjct: 63 AAATAALTAVM--SNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYT 120
Query: 413 TNVQEDDE-GLSL 448
++++ED+E GLSL
Sbjct: 121 SSLEEDEESGLSL 133