BLASTX nr result
ID: Ephedra27_contig00000083
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00000083
(442 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264508.1| PREDICTED: photosystem II reaction center W ... 73 4e-11
gb|ABK21312.1| unknown [Picea sitchensis] gi|116779706|gb|ABK213... 72 1e-10
ref|NP_001044402.1| Os01g0773700 [Oryza sativa Japonica Group] g... 70 2e-10
emb|CAA62296.1| component of 6.1 kDa polypeptide of photosystem ... 70 3e-10
gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem I... 70 3e-10
ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutr... 70 4e-10
ref|XP_006295756.1| hypothetical protein CARUB_v10024876mg [Caps... 69 5e-10
gb|ACN40147.1| unknown [Picea sitchensis] gi|224285390|gb|ACN404... 69 5e-10
gb|ABK21433.1| unknown [Picea sitchensis] gi|116791862|gb|ABK261... 69 5e-10
ref|NP_180615.1| photosystem II reaction center W protein [Arabi... 69 6e-10
ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [S... 69 8e-10
ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arab... 67 2e-09
ref|XP_004961567.1| PREDICTED: photosystem II reaction center W ... 67 3e-09
ref|XP_006644788.1| PREDICTED: photosystem II reaction center W ... 65 7e-09
gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus pe... 65 9e-09
gb|EEE55467.1| hypothetical protein OsJ_03635 [Oryza sativa Japo... 65 9e-09
ref|XP_006487787.1| PREDICTED: photosystem II reaction center W ... 65 1e-08
gb|EOY11052.1| Photosystem II reaction center W protein, chlorop... 65 1e-08
ref|NP_001150186.1| LOC100283816 [Zea mays] gi|195637404|gb|ACG3... 65 1e-08
gb|EOX94570.1| Photosystem II reaction center W [Theobroma cacao] 64 2e-08
>ref|XP_002264508.1| PREDICTED: photosystem II reaction center W protein, chloroplastic
[Vitis vinifera] gi|296087925|emb|CBI35208.3| unnamed
protein product [Vitis vinifera]
Length = 135
Score = 72.8 bits (177), Expect = 4e-11
Identities = 50/128 (39%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Frame = +1
Query: 52 ATLCNASALSSLGSRTIKSPVAIPPLAAGNGKRRVACKAEKQGAGSVAGPLV---ATAVA 222
AT ++++S G I SPV P A G RV C +E++ GS G + A+ +A
Sbjct: 10 ATSLVRASVASKGLNGISSPVLGLPAMAKKG--RVRCMSEEKPCGSDMGSSISMGASLMA 67
Query: 223 LHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQE 402
++ AMALVD+R+STE WIL GVFGLIW LY + ++E
Sbjct: 68 AAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTATLEE 127
Query: 403 DDE-GLSL 423
DDE GLSL
Sbjct: 128 DDESGLSL 135
>gb|ABK21312.1| unknown [Picea sitchensis] gi|116779706|gb|ABK21398.1| unknown
[Picea sitchensis] gi|116790469|gb|ABK25626.1| unknown
[Picea sitchensis] gi|116791712|gb|ABK26081.1| unknown
[Picea sitchensis] gi|116791741|gb|ABK26091.1| unknown
[Picea sitchensis] gi|148907724|gb|ABR16989.1| unknown
[Picea sitchensis] gi|224285778|gb|ACN40604.1| unknown
[Picea sitchensis]
Length = 146
Score = 71.6 bits (174), Expect = 1e-10
Identities = 59/148 (39%), Positives = 73/148 (49%), Gaps = 16/148 (10%)
Frame = +1
Query: 28 FLSDYTMAATLCNASALSSLGSRTIK-SPVAIPPLAAGNGKRRVACKAEKQG-------- 180
F + +++A L N S S+ SR S V +P L KR C A+KQ
Sbjct: 7 FSTTTSVSAFLLNRSLGSAAASRPSSLSVVGLPAL----DKRCTVCYAQKQEEIVRAKEN 62
Query: 181 ------AGSVAGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWIL 342
+ A PL+A A AL S T A ALVD+R+STE WIL
Sbjct: 63 SQNCMVSLGGAAPLMAVAAALTVS----TKEAFALVDERLSTEGTGLGLGLSNPLLGWIL 118
Query: 343 VGVFGLIWTLYVSTYTNVQED-DEGLSL 423
VGVF LIW LY +TY+NV+ED D GLSL
Sbjct: 119 VGVFTLIWILYFTTYSNVKEDEDSGLSL 146
>ref|NP_001044402.1| Os01g0773700 [Oryza sativa Japonica Group]
gi|75112952|sp|Q5ZBY9.1|PSBW_ORYSJ RecName:
Full=Photosystem II reaction center W protein,
chloroplastic; AltName: Full=PSII 6.1 kDa protein;
Flags: Precursor gi|53793363|dbj|BAD52944.1| putative
photosystem II reaction center W protein [Oryza sativa
Japonica Group] gi|113533933|dbj|BAF06316.1|
Os01g0773700 [Oryza sativa Japonica Group]
gi|125527886|gb|EAY76000.1| hypothetical protein
OsI_03925 [Oryza sativa Indica Group]
gi|215765750|dbj|BAG87447.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767329|dbj|BAG99557.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 124
Score = 70.5 bits (171), Expect = 2e-10
Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Frame = +1
Query: 52 ATLCNASALSSLGSRTIKSPVAIPPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHG 231
AT+ A+A S + + P+ +P + A +R V C K+ A A A A L
Sbjct: 2 ATVSAAAATSVVARAVLAGPLGLPQMRARRSER-VRCNYSKEAATPAAAVKGAGASLL-- 58
Query: 232 SMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 411
+M AMALVD+RMSTE WIL+GVFGLIW+LY ++++ED+E
Sbjct: 59 AMAATAAPAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDEE 118
Query: 412 --GLSL 423
GLSL
Sbjct: 119 SGGLSL 124
>emb|CAA62296.1| component of 6.1 kDa polypeptide of photosystem II reaction center
[Arabidopsis thaliana]
Length = 133
Score = 70.1 bits (170), Expect = 3e-10
Identities = 56/137 (40%), Positives = 78/137 (56%), Gaps = 6/137 (4%)
Frame = +1
Query: 31 LSDYTMAATLCNASALSSLGSRT--IKSPV-AIPPLAAGNGKRRVACKAE-KQGAGSVAG 198
++ +T +A+ +A+ + L T I +PV +PP+ G K V C E KQG SV G
Sbjct: 1 MASFTASASTVSAARPALLLKPTVAISAPVLGLPPM--GKKKGGVRCSMETKQGNVSVMG 58
Query: 199 PLV-ATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLY 375
V A A A ++M +N AMALVD+RMSTE WIL GVFGLIWT +
Sbjct: 59 AGVSAAATAALTAVM--SNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFF 116
Query: 376 VSTYTNVQEDDE-GLSL 423
+ ++++ED+E GLSL
Sbjct: 117 FAYTSSLEEDEESGLSL 133
>gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem II reaction center
[Brassica rapa]
Length = 133
Score = 70.1 bits (170), Expect = 3e-10
Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Frame = +1
Query: 31 LSDYTMAATLCNASALSSLGSRTI--KSPV-AIPPLAAGNGKRRVACKAEKQGAGSVAGP 201
++ +T +A+ + + + L T+ +PV +PP+ G R + + ++ +V
Sbjct: 1 MASFTASASTVSVARPALLLKPTVAVSAPVLGLPPMGKRKGGVRCSMEPKQGNVSAVGAG 60
Query: 202 LVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVS 381
+ A A A ++M +N AMALVDDRMSTE WIL+GVFGLIWT Y +
Sbjct: 61 VSAAATAALTAVM--SNPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFT 118
Query: 382 TYTNVQEDDE-GLSL 423
+++ ED+E GLSL
Sbjct: 119 YTSSLDEDEESGLSL 133
>ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutrema salsugineum]
gi|557111329|gb|ESQ51613.1| hypothetical protein
EUTSA_v10017409mg [Eutrema salsugineum]
Length = 133
Score = 69.7 bits (169), Expect = 4e-10
Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Frame = +1
Query: 31 LSDYTMAATLCNASALSSLGSRTI--KSPV-AIPPLAAGNGKRRVACKAEKQGAGSVAGP 201
++ +T +A+ + + + L T+ +PV +PP++ G R + + +++ V
Sbjct: 1 MASFTASASTISVARPALLLKPTVAVSTPVLGLPPMSKRKGGVRCSMEKKQENVSVVGAG 60
Query: 202 LVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVS 381
+ A A A ++M +N AMALVDDRMSTE WIL GVFGLIWT Y
Sbjct: 61 VSAAATAALTAVM--SNPAMALVDDRMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFV 118
Query: 382 TYTNVQEDDE-GLSL 423
++++ED+E GLSL
Sbjct: 119 YTSSLEEDEESGLSL 133
>ref|XP_006295756.1| hypothetical protein CARUB_v10024876mg [Capsella rubella]
gi|482564464|gb|EOA28654.1| hypothetical protein
CARUB_v10024876mg [Capsella rubella]
Length = 133
Score = 69.3 bits (168), Expect = 5e-10
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Frame = +1
Query: 31 LSDYTMAATLCNASALSSLGSRTI--KSPV-AIPPLAAGNGKRRVACKAE-KQGAGSVAG 198
++ +T +A+ +A+ + L T+ +PV +PP+ G K V C E KQG S G
Sbjct: 1 MASFTASASTVSAARPALLLKPTVAVSAPVLGLPPM--GKKKGGVRCSMETKQGNVSAMG 58
Query: 199 PLV-ATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLY 375
V A A A ++M +N AMALVD+RMSTE WIL GVFGLIWT Y
Sbjct: 59 AGVSAAATAALSAVM--SNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFY 116
Query: 376 VSTYTNVQEDDE-GLSL 423
++++ED+E GLSL
Sbjct: 117 FVYTSSLEEDEESGLSL 133
>gb|ACN40147.1| unknown [Picea sitchensis] gi|224285390|gb|ACN40418.1| unknown
[Picea sitchensis]
Length = 149
Score = 69.3 bits (168), Expect = 5e-10
Identities = 56/147 (38%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Frame = +1
Query: 28 FLSDYTMAATLCNASALSSLGSRTIKSPVAIPPLAAGNGKRRVACKAEKQG--------- 180
F + +++A L N S S+ SR V KR C A+KQ
Sbjct: 7 FSTTTSVSAFLLNRSLGSAAASRPSSLSVVGMTGLPALDKRCTVCYAQKQEEIVRAKENS 66
Query: 181 -----AGSVAGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILV 345
+ A PL+A A AL S T A ALVD+R+STE WILV
Sbjct: 67 QNCMVSLGGAAPLMAVAAALTVS----TKEAFALVDERLSTEGTGLGLGLSNPLLGWILV 122
Query: 346 GVFGLIWTLYVSTYTNVQED-DEGLSL 423
GVF LIW LY +TY+NV+ED D GLSL
Sbjct: 123 GVFTLIWILYFTTYSNVKEDEDSGLSL 149
>gb|ABK21433.1| unknown [Picea sitchensis] gi|116791862|gb|ABK26137.1| unknown
[Picea sitchensis] gi|116791959|gb|ABK26178.1| unknown
[Picea sitchensis] gi|148906058|gb|ABR16188.1| unknown
[Picea sitchensis] gi|148907944|gb|ABR17092.1| unknown
[Picea sitchensis] gi|224284792|gb|ACN40126.1| unknown
[Picea sitchensis] gi|224285006|gb|ACN40232.1| unknown
[Picea sitchensis]
Length = 146
Score = 69.3 bits (168), Expect = 5e-10
Identities = 58/148 (39%), Positives = 72/148 (48%), Gaps = 16/148 (10%)
Frame = +1
Query: 28 FLSDYTMAATLCNASALSSLGSRTIK-SPVAIPPLAAGNGKRRVACKAEKQG-------- 180
F + +++A L N S S+ SR S V +P L KR C A+KQ
Sbjct: 7 FSTTTSVSAFLLNRSLGSAAASRPSSLSVVGLPAL----DKRCTVCYAQKQEEIVRAKEN 62
Query: 181 ------AGSVAGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWIL 342
+ A PL+A A AL S T A ALVD+R+STE WIL
Sbjct: 63 SQNCMVSLGGAAPLMAVAAALTVS----TKEAFALVDERLSTEGTGLGLGLSNPLLGWIL 118
Query: 343 VGVFGLIWTLYVSTYTNVQED-DEGLSL 423
VGVF LIW LY +TY+ V+ED D GLSL
Sbjct: 119 VGVFTLIWILYFTTYSGVKEDEDSGLSL 146
>ref|NP_180615.1| photosystem II reaction center W protein [Arabidopsis thaliana]
gi|122064936|sp|Q39194.2|PSBW_ARATH RecName:
Full=Photosystem II reaction center W protein,
chloroplastic; AltName: Full=PSII 6.1 kDa protein;
Flags: Precursor gi|11762232|gb|AAG40394.1|AF325042_1
At2g30570 [Arabidopsis thaliana]
gi|14030715|gb|AAK53032.1|AF375448_1 At2g30570/T6B20.8
[Arabidopsis thaliana] gi|1946362|gb|AAB63080.1|
photosystem II reaction center 6.1KD protein
[Arabidopsis thaliana] gi|21593002|gb|AAM64951.1|
photosystem II reaction center 6.1KD protein
[Arabidopsis thaliana] gi|23506075|gb|AAN28897.1|
At2g30570/T6B20.8 [Arabidopsis thaliana]
gi|330253315|gb|AEC08409.1| photosystem II reaction
center W protein [Arabidopsis thaliana]
Length = 133
Score = 68.9 bits (167), Expect = 6e-10
Identities = 56/137 (40%), Positives = 77/137 (56%), Gaps = 6/137 (4%)
Frame = +1
Query: 31 LSDYTMAATLCNASALSSLGSRT--IKSPV-AIPPLAAGNGKRRVACKAE-KQGAGSVAG 198
++ +T +A+ +A+ + L T I +PV +PP+ G K V C E KQG SV G
Sbjct: 1 MASFTASASTVSAARPALLLKPTVAISAPVLGLPPM--GKKKGGVRCSMETKQGNVSVMG 58
Query: 199 PLV-ATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLY 375
V A A A ++M +N AMALVD+RMSTE WIL GVFGLIWT +
Sbjct: 59 AGVSAAATAALTAVM--SNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFF 116
Query: 376 VSTYTNVQEDDE-GLSL 423
++++ED+E GLSL
Sbjct: 117 FVYTSSLEEDEESGLSL 133
>ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [Sorghum bicolor]
gi|241930553|gb|EES03698.1| hypothetical protein
SORBIDRAFT_03g036090 [Sorghum bicolor]
Length = 126
Score = 68.6 bits (166), Expect = 8e-10
Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Frame = +1
Query: 52 ATLCNASALSSLGSRTIKSPVAI--PPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVAL 225
AT+ A+A + + I P A+ P L A + RV C K A A A+ +A
Sbjct: 2 ATVSAAAATTVVARAAIARPNALGLPQLRARS--ERVRCSYAKDAAAVSAKAAGASLLAA 59
Query: 226 HGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQED 405
G++ A+ALVD+RMSTE WIL+GVFGLIW+LY +++ ED
Sbjct: 60 AGAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSDLDED 119
Query: 406 DE-GLSL 423
+E GLSL
Sbjct: 120 EESGLSL 126
>ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arabidopsis lyrata subsp.
lyrata] gi|297326958|gb|EFH57378.1| hypothetical protein
ARALYDRAFT_902045 [Arabidopsis lyrata subsp. lyrata]
Length = 133
Score = 67.0 bits (162), Expect = 2e-09
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Frame = +1
Query: 31 LSDYTMAATLCNASALSSLGSRTI--KSPV-AIPPLAAGNGKRRVACKAE-KQGAGSVAG 198
++ +T +A+ +A+ + L T+ +PV +PP+ G K V C E KQG S G
Sbjct: 1 MASFTASASTVSAARPAILLKPTVAVSAPVLGLPPM--GKKKGGVRCSMETKQGNVSAMG 58
Query: 199 PLV-ATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLY 375
V A A A ++M +N AMALVD+RMSTE WIL GVFGLIWT +
Sbjct: 59 AGVSAAATAALTAVM--SNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFF 116
Query: 376 VSTYTNVQEDDE-GLSL 423
++++ED+E GLSL
Sbjct: 117 FVYTSSLEEDEESGLSL 133
>ref|XP_004961567.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Setaria italica]
Length = 204
Score = 66.6 bits (161), Expect = 3e-09
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Frame = +1
Query: 52 ATLCNASALSSLGSRTIKSPV---AIPPLAAGNGKRRV-ACKAEKQGAGSVAGPLVATAV 219
AT+ A + + ++ P +P L A K R AC ++ G+G A A A
Sbjct: 73 ATISAAGSAALFAGASVARPAQAHGLPQLRARADKVRCSACSRQQDGSGKGAAAPAAGAS 132
Query: 220 ALHG--SMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTN 393
+L S M ++ A+ALVD+RMSTE WIL+GVFGLIW+LY + YT+
Sbjct: 133 SLLAVASAMTTSSPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLY-TVYTS 191
Query: 394 VQEDDE---GLSL 423
++DE GLSL
Sbjct: 192 TLDEDEESGGLSL 204
>ref|XP_006644788.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Oryza brachyantha]
Length = 128
Score = 65.5 bits (158), Expect = 7e-09
Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Frame = +1
Query: 52 ATLCNASALSSLGSRTIKSPVAIP-PLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALH 228
AT+ A+A + + + P A+ P RV C K G + + V A A
Sbjct: 2 ATVSAAAATTVVARAVLARPNALGLPQMRARRSERVRCSYSKDGKEASSPAAVKGAGASL 61
Query: 229 GSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDD 408
+M AMALVD+RMSTE WIL+GVFGLIW+LY ++++ED+
Sbjct: 62 LAMAATAAPAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDE 121
Query: 409 E--GLSL 423
E GLSL
Sbjct: 122 ESGGLSL 128
>gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus persica]
Length = 165
Score = 65.1 bits (157), Expect = 9e-09
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Frame = +1
Query: 31 LSDYTMAATLCNASALSSLGSRTI--KSPVAIP-------PLAAGNGKRRVACKAEKQGA 183
LS + AT+ ++ SS+ ++ K V P P A GK + + +K+ +
Sbjct: 27 LSKLKIMATITASTPTSSITRASLVHKPSVGAPSATVLALPSLARKGKVGCSMEGKKESS 86
Query: 184 GSVAGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLI 363
S G + A A + M ++ AMALVDDR+STE WIL GVFGLI
Sbjct: 87 NSKMGKGASLAAAAMAATM--SSPAMALVDDRLSTEGTGLPFGLSNNILGWILFGVFGLI 144
Query: 364 WTLYVSTYTNVQEDDE-GLSL 423
WT Y ++++ED+E GLSL
Sbjct: 145 WTFYFIYTSSLEEDEESGLSL 165
>gb|EEE55467.1| hypothetical protein OsJ_03635 [Oryza sativa Japonica Group]
Length = 107
Score = 65.1 bits (157), Expect = 9e-09
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Frame = +1
Query: 52 ATLCNASALSSLGSRTIKSPVAIPPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHG 231
AT+ A+A S + + P+ +P + A +R GAG+ + ATA
Sbjct: 2 ATVSAAAATSVVARAVLAGPLGLPQMRARRSER---------GAGASLLAMAATAAP--- 49
Query: 232 SMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 411
AMALVD+RMSTE WIL+GVFGLIW+LY ++++ED+E
Sbjct: 50 --------AMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDEE 101
Query: 412 --GLSL 423
GLSL
Sbjct: 102 SGGLSL 107
>ref|XP_006487787.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Citrus sinensis]
Length = 137
Score = 64.7 bits (156), Expect = 1e-08
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Frame = +1
Query: 97 TIKSPV-AIPPLAAGNGKRRVACKAEKQGAGSVAGP-----LVATAVALHGSMMDKTNVA 258
T SPV +P +A G RV C E++ + +G +VA+ +A ++ A
Sbjct: 24 THASPVYGMPAMATTRG--RVRCSLEEKAPAAASGKSSKASMVASLMAAAAALSTAAGPA 81
Query: 259 MALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE-GLSL 423
MALVD+RM+TE WIL GVFGLIW LY +++ED+E GLSL
Sbjct: 82 MALVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIYTGDLEEDEESGLSL 137
>gb|EOY11052.1| Photosystem II reaction center W protein, chloroplastic, putative
[Theobroma cacao]
Length = 135
Score = 64.7 bits (156), Expect = 1e-08
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Frame = +1
Query: 52 ATLCNASALSSLGSRTIK-------SPVAIPPLAAGNGKRRVACKAEKQGAGSVAGP-LV 207
AT+ ++ + L T+K SPV P+ A NG+ R + ++ + P +V
Sbjct: 2 ATITASNFAAVLPKATLKGSYKVQSSPVLGLPVMATNGRVRCTLEQKRSASSMSLNPSMV 61
Query: 208 ATAVALHGSMMDKT-NVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVST 384
A+ +A + M T AMALVD+R+STE WIL G FGLIW LY
Sbjct: 62 ASLMAAAAAAMTTTAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGAFGLIWALYFIY 121
Query: 385 YTNVQED-DEGLSL 423
++++ED D GLSL
Sbjct: 122 VSSLEEDEDSGLSL 135
>ref|NP_001150186.1| LOC100283816 [Zea mays] gi|195637404|gb|ACG38170.1| photosystem II
reaction center W protein [Zea mays]
Length = 127
Score = 64.7 bits (156), Expect = 1e-08
Identities = 44/126 (34%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Frame = +1
Query: 52 ATLCNASALSSLGSRTIKSPVAIPPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHG 231
AT+ A + + I P A+ A RV C K A A+ +A G
Sbjct: 2 ATVSAAVVTTIVARAAIARPNALGLPALRASSERVRCSYAKDAAPVSTKGAGASLLAAAG 61
Query: 232 SMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 411
++ A+ALVD+RMSTE WIL+GVFGLIW+LY +++ ED+E
Sbjct: 62 AVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLDEDEE 121
Query: 412 --GLSL 423
GLSL
Sbjct: 122 SGGLSL 127
>gb|EOX94570.1| Photosystem II reaction center W [Theobroma cacao]
Length = 135
Score = 64.3 bits (155), Expect = 2e-08
Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Frame = +1
Query: 70 SALSSLGSRTIKSPVAIPPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHGSMMDKT 249
+AL+ S + S VAI L A K +V C EK+ + G V + +L + T
Sbjct: 16 AALAHKPSPRVASSVAIG-LPAMAKKGKVMCSMEKKSSAEEKGSNVGMSASLLAAACAAT 74
Query: 250 --NVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE-GLS 420
+ AMALVD+RM+TE WIL VFGLIW LY+ ++++ED+E GLS
Sbjct: 75 MSSPAMALVDERMTTEGTGLPFGLSNNILGWILFAVFGLIWALYIVYTSSLEEDEESGLS 134
Query: 421 L 423
L
Sbjct: 135 L 135