BLASTX nr result

ID: Ephedra26_contig00026857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00026857
         (473 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26261.1| unknown [Picea sitchensis]                              82   7e-14
ref|XP_006837938.1| hypothetical protein AMTR_s00102p00031770 [A...    80   2e-13
gb|ABK23543.1| unknown [Picea sitchensis]                              71   1e-10

>gb|ABK26261.1| unknown [Picea sitchensis]
          Length = 261

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
 Frame = +3

Query: 9   QSEIFPAFVQQRCPVPVLQLHEGVVLKWPTVAAACGIGVVMGLCLGLKALK--LQKTQTV 182
           ++ + P+++Q+ CP+P++ L     L+WPTVAAAC  G V+GL  G   L+  + +++  
Sbjct: 27  KTALLPSYIQEICPLPLIHLQGERPLRWPTVAAACLCGCVLGLLSGGHMLRCAVTRSRRE 86

Query: 183 TWIWPWAMAFLWYALMSVGGFFYHSVAHMPIFYALDIIGTACSSLSAIAGCLGYSFKGYR 362
              + W  AFLWY +M +GG F+H                 C S+S I G +        
Sbjct: 87  RGFFSWGFAFLWYGVMCLGGLFHH-----------------CFSISIIPGSI-------- 121

Query: 363 YAHVINHAAMLLYVVVAG----MAVLGPQWAKEALYLVP 467
             +  + AA +L + + G     AV G Q   E LYLVP
Sbjct: 122 LVNDTSKAARILLLAIYGGVIFSAVFGSQAVLEVLYLVP 160


>ref|XP_006837938.1| hypothetical protein AMTR_s00102p00031770 [Amborella trichopoda]
           gi|548840353|gb|ERN00507.1| hypothetical protein
           AMTR_s00102p00031770 [Amborella trichopoda]
          Length = 296

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 50/136 (36%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
 Frame = +3

Query: 72  EGVVLKWPTVAAACGIGVVMGLCLGLKALKLQKTQTVTWIWPWAMAFLWYALMSVGGFFY 251
           E V +KWP VA    +   +    G ++    K  +       A A LWY LM +GGFF+
Sbjct: 50  EIVHVKWPLVAIVSSMTGTLCFIAGKQSFSHPKKGSFLM----ANALLWYCLMCLGGFFH 105

Query: 252 HSVAHMP-IFYALDIIGTACSSLSAIAGCLGYS--FKGYRYAHVINHAAMLLYVVVAGMA 422
           HS  +   IFY  D+ GT CSS+S IA  LG        R   ++ +A   ++V+     
Sbjct: 106 HSFFNKRNIFYCFDVFGTCCSSVSLIAAILGVDDRISSNRRNFIVFYAMATIFVI----- 160

Query: 423 VLGPQWAKEALYLVPS 470
             GPQWA+EALYL+P+
Sbjct: 161 -FGPQWAREALYLLPT 175


>gb|ABK23543.1| unknown [Picea sitchensis]
          Length = 204

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
 Frame = +3

Query: 198 WAMAFLWYALMSVGGFFYHSVAHMPIFYALDIIGTACSSLSAIAGCLGYSFKGYRYAHVI 377
           W  AFLWY +M +GG F+H +   P FY +DIIGT C S+S I G +          +  
Sbjct: 18  WGFAFLWYGVMCLGGLFHHCIGPSPFFYKMDIIGTGCFSISIIPGSI--------LVNDT 69

Query: 378 NHAAMLLYVVVAG----MAVLGPQWAKEALYLVP 467
           + AA +L + + G     AV G Q   E LYLVP
Sbjct: 70  SKAARILLLAIYGGVIFSAVFGSQAVLEVLYLVP 103


Top